Acta Crystallographica Section B

Structural Science, Crystal Engineering and Materials

Volume 70, Part 1 (February 2014)

crystal engineering

Acta Cryst. (2014). B70, 157-171    [ doi:10.1107/S2052520613034987 ]

Competition between hydrogen and halogen bonding in the structures of 5,10-dihydroxy-5,10-dihydroboranthrenes

K. Durka, S. Lulinski, K. N. Jarzembska, J. Smetek, J. Serwatowski and K. Wozniak

Abstract: X-ray crystallographic and computational studies are reported for a series of boranthrenes, substituted with halogen atoms. The role of competitive hydrogen (O-H...O, O-H...F, C-H...O) and halogen (Cl...Cl, O...Br, F...F) bonding interactions on the molecular arrangement in the crystal structures is discussed. The structural analysis and calculations reveal that the O-H...O hydrogen bond in the unsubstituted derivative 5,10-dihydroxy-5,10-dihydroboranthrene, C12H10B2O2, is of moderate strength (ca -20 kJ mol-1), but weaker than that in the related thiophene derivative 4,8-dihydro-4,8-dihydroxy-p-diborino[2,3-b:5,6-b]dithiophene, C8H6B2O2S2 (ca -40 kJ mol-1). This is due to shielding of the OH group by the H atoms in the [beta]-position of the boranthrene unit. Structural diversity derived from the flexibility of the O-H...O hydrogen bond facilitates the occurrence of other competitive interactions. For instance, in the 1,6-difluoro derivative, C12H8B2F2O2, the crystal packing results from O-H...F and F...F interactions. In turn, the 1,6-dibromo derivative, C12H8B2Br2O2, is dominated by Br...O halogen-bond interactions. In the most interesting case, the 1,6-dichloro derivative, C12H8B2Cl2O2, molecular disorder leads to the formation of two different supramolecular arrangements co-existing in the crystal lattice, one based on the Cl...Cl and C-H...O bonds, and the other stabilized by O-H...O hydrogen bonds. Calculations performed with density-functional theory (DFT; CRYSTAL09) and PIXEL methodologies show that both lattices are characterized by similar energy values (ca -100 kJ mol-1). A mixed arrangement with random or short-range-ordered molecular orientations can also be expected.

CCDC references: 979192, 979193, 979194, 979195 and 979196

Keywords: hydrogen bonding; halogen bonding; boranthrenes; energy calculations; X-ray structural analysis.

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Structure factor file (CIF format) (115.5 kbytes)
[ doi:10.1107/S2052520613034987/bi5017Isup2.hkl ]
Contains datablock I

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Structure factor file (CIF format) (235.7 kbytes)
[ doi:10.1107/S2052520613034987/bi5017IIsup3.hkl ]
Contains datablock II

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Structure factor file (CIF format) (105.1 kbytes)
[ doi:10.1107/S2052520613034987/bi5017IIIsup4.hkl ]
Contains datablock III

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Structure factor file (CIF format) (77.6 kbytes)
[ doi:10.1107/S2052520613034987/bi5017IVsup5.hkl ]
Contains datablock IV

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Structure factor file (CIF format) (64.5 kbytes)
[ doi:10.1107/S2052520613034987/bi5017Vsup6.hkl ]
Contains datablock V


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