Acta Crystallographica Section C

Crystal Structure Communications

Volume 58, Part 5 (May 2002)



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Acta Cryst. (2002). C58, o289-o294    [doi:10.1107/S0108270102005632]

Hydrogen bonding in 2-amino-4,6-dimethoxypyrimidine, 2-benzylamino-4,6-bis(benzyloxy)pyrimidine and 2-amino-4,6-bis(N-pyrrolidino)pyrimidine: chains of fused rings and a centrosymmetric dimer

J. N. Low, A. Quesada, A. Marchal, M. Melguizo, M. Nogueras and C. Glidewell

Abstract: Molecules of 2-amino-4,6-dimethoxypyrimidine, C6H9N3O2, (I), are linked by two N-H...N hydrogen bonds [H...N 2.23 and 2.50  Å, N...N 3.106  (2) and 3.261  (2)  Å, and N-H...N 171 and 145°] into a chain of fused rings, where alternate rings are generated by centres of inversion and twofold rotation axes. Adjacent chains are linked by aromatic [bold pi]-[bold pi]-stacking interactions to form a three-dimensional framework. In 2-benzylamino-4,6-bis(benzyloxy)pyrimidine, C25H23N3O2, (II), the molecules are linked into centrosymmetric R{_2^2}(8) dimers by paired N-H...N hydrogen bonds [H...N 2.13  Å, N...N 2.997  (2)  Å and N-H...N 170°]. Molecules of 2-amino-4,6-bis(N-pyrrolidino)pyrimidine, C12H19N5, (III), are linked by two N-H...N hydrogen bonds [H...N 2.34 and 2.38  Å, N...N 3.186  (2) and 3.254  (2)  Å, and N-H...N 163 and 170°] into a chain of fused rings similar to that in (I).

Formula: C6H9N3O2, C25H23N3O2 and C12H19N5

Online 30 April 2002


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Structure factor file (CIF format) (234.4 kbytes)
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Structure factor file (CIF format) (122.2 kbytes)
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