Acta Crystallographica Section C

Crystal Structure Communications

Volume 63, Part 8 (August 2007)


organic compounds



sk3142 scheme

Acta Cryst. (2007). C63, o454-o457    [ doi:10.1107/S0108270107029721 ]

Two different modes of halogen bonding in two 4-nitroimidazole derivatives

M. Kubicki and P. Wagner

Abstract: In the crystal structures of the two imidazole derivatives 5-chloro-1,2-dimethyl-4-nitro-1H-imidazole, C5H6ClN3O2, (I), and 2-chloro-1-methyl-4-nitro-1H-imidazole, C4H4ClN3O2, (II), C-Cl...O halogen bonds are the principal specific interactions responsible for the crystal packing. Two different halogen-bond modes are observed: in (I), there is one very short and directional C-Cl...O contact [Cl...O = 2.899 (1) Å], while in (II), the C-Cl group approaches two different O atoms from two different molecules, and the contacts are longer [3.285 (2) and 3.498 (2) Å] and less directional. In (I), relatively short C-H...O hydrogen bonds provide the secondary interactions for building the crystal structure; in (II), the C-H...O contacts are longer but there is a relatively short [pi]-[pi] contact between molecules related by a centre of symmetry. The molecule of (I) is almost planar, the plane of the nitro group making a dihedral angle of 6.97 (7)° with the mean plane of the imidazole ring. The molecule of (II) has crystallographically imposed mirror symmetry and the nitro group lies in the mirror plane.

Formula: C5H6ClN3O2 and C4H4ClN3O2


hkldisplay filedownload file

Structure factor file (CIF format) (85.2 kbytes)
[ doi:10.1107/S0108270107029721/sk3142Isup2.hkl ]
Contains datablock I


hkldisplay filedownload file

Structure factor file (CIF format) (45.9 kbytes)
[ doi:10.1107/S0108270107029721/sk3142IIsup3.hkl ]
Contains datablock II


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