Acta Crystallographica Section D

Biological Crystallography

Volume 63, Part 4 (April 2007)


research papers



Acta Cryst. (2007). D63, 458-464    [ doi:10.1107/S0907444907003228 ]

Packing and loop-structure variations in non-isomorphous crystals of FabZ from Plasmodium falciparum

P. L. Swarnamukhi, S. K. Sharma, P. Padala, N. Surolia, A. Surolia and K. Suguna

Abstract: The crystals obtained from various batches of crystallization trials of FabZ from Plasmodium falciparum exhibited non-isomorphism. The c axis of the I222 cell showed a large variation of about 16 Å, from c = 81 Å to c = 97 Å. Complete data sets were collected for three crystal forms with varying lengths of the c axis (form 1, c = 97 Å; form 2, c = 92 Å; form 3, c = 81 Å). The crystal structure of form 1 has been reported previously. Here, the crystal structures of the other two crystal forms are reported and a detailed structural comparison is made of the three crystal forms in order to explore the possible reasons for the existence of non-isomorphism. The conformations of three loops vary between the three crystal forms. The disposition of the loops affects the crystal packing and hence the unit-cell parameter. The crystallization condition and crystallization method employed, which change the evaporation rate, determine the crystal form of the enzyme. The present analysis shows that pH-induced intrinsic conformational changes in the protein play a key role in the observed differences.

PDB references: 2oki and 2okh

Keywords: non-isomorphism; FabZ; crystal packing; loop structure.


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Packing diagrams


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