Acta Crystallographica Section D

Biological Crystallography

Volume 69, Part 12 (December 2013)

research papers

Acta Cryst. (2013). D69, 2309-2319    [ doi:10.1107/S0907444913021306 ]

Structural basis for a hand-like site in the calcium sensor CatchER with fast kinetics

Y. Zhang, F. Reddish, S. Tang, Y. Zhuo, Y.-F. Wang, J. J. Yang and I. T. Weber

Abstract: Calcium ions, which are important signaling molecules, can be detected in the endoplasmic reticulum by an engineered mutant of green fluorescent protein (GFP) designated CatchER with a fast off-rate. High resolution (1.78-1.20 Å) crystal structures were analyzed for CatchER in the apo form and in complexes with calcium or gadolinium to probe the binding site for metal ions. While CatchER exhibits a 1:1 binding stoichiometry in solution, two positions were observed for each of the metal ions bound within the hand-like site formed by the carboxylate side chains of the mutated residues S147E, S202D, Q204E, F223E and T225E that may be responsible for its fast kinetic properties. Comparison of the structures of CatchER, wild-type GFP and enhanced GFP confirmed that different conformations of Thr203 and Glu222 are associated with the two forms of Tyr66 of the chromophore which are responsible for the absorbance wavelengths of the different proteins. Calcium binding to CatchER may shift the equilibrium for conformational population of the Glu222 side chain and lead to further changes in its optical properties.

PDB references: 4l12, 4l13 and 4l1i

Keywords: calcium sensors; green fluorescent protein; metal-binding sites in proteins.

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[ doi:10.1107/S0907444913021306/dw5059sup1.pdf ]
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