Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536802002866/ww6004sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536802002866/ww6004Isup2.hkl |
CCDC reference: 182585
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean (C-C) = 0.009 Å
- R factor = 0.057
- wR factor = 0.136
- Data-to-parameter ratio = 19.3
checkCIF results
No syntax errors found ADDSYM reports no extra symmetry
A solution of CuCl2·5H2O (0.23 g, 1 mmol) in methanol (50 ml) was added to a solution of tpen (0.22 g, 0.5 mmol) in methanol (5 ml). A green precipitate formed immediately after mixing. The mixture containing the precipitate was stirred for 20 min. and then 5 ml of a methanolic solution of sodium acetate (0.1 g, 1.2 mmol) was added. The precipitate dissolved immediately without ligation of acetate. The resulting green solution was stirred for 1 h. After stirring, the green solution was left at room temperature for a few days. A suitable single green crystal for X-ray analysis was then formed. Analysis calculated for the title complex: C 45.03, H 4.07, N 12.12%; found: C 44.85, H 4.13, N, 12.22%.
H atoms were treated as riding atoms using SHELXL97 defaults. The highest peak in the difference map is 2.4 Å from H7 and the largest hole is 0.69 Å from the Cu atom.
Data collection: STADI4 (Stoe & Cie, 1996); cell refinement: STADI4; data reduction: X-RED (Stoe & Cie, 1996); program(s) used to solve structure: SHELXS97-2 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97-2 (Sheldrick, 1997); molecular graphics: ORTEP-3 (Farrugia, 1997).
Fig. 1. ORTEP-3 (Farrugia, 1997) drawing of (I) with the atom numbering; displacement ellipsolids are drawn at the 50% probability level and H atoms have been omitted for clarity. |
[Cu2Cl4(C26H28N6)] | F(000) = 1408 |
Mr = 693.42 | Dx = 1.589 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -p_2ac_2ab | Cell parameters from 25 reflections |
a = 13.113 (1) Å | θ = 9.6–10.9° |
b = 20.926 (2) Å | µ = 1.85 mm−1 |
c = 10.6378 (8) Å | T = 298 K |
V = 2919.1 (4) Å3 | Monoclinic, green |
Z = 4 | 0.32 × 0.25 × 0.22 mm |
Stoe STADI4 diffractometer | 2303 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.079 |
Graphite monochromator | θmax = 27.4°, θmin = 2.0° |
ω–2θ scans | h = 0→16 |
Absorption correction: numerical (Stoe & Cie, 1996) | k = 0→26 |
Tmin = 0.665, Tmax = 0.824 | l = 0→13 |
3548 measured reflections | 3 standard reflections every 60 min |
3324 independent reflections | intensity decay: 5% |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.057 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.136 | H-atom parameters constrained |
S = 1.16 | w = 1/[σ2(Fo2) + (0.0328P)2 + 10.1201P] where P = (Fo2 + 2Fc2)/3 |
3324 reflections | (Δ/σ)max = 0.001 |
172 parameters | Δρmax = 0.79 e Å−3 |
0 restraints | Δρmin = −0.46 e Å−3 |
[Cu2Cl4(C26H28N6)] | V = 2919.1 (4) Å3 |
Mr = 693.42 | Z = 4 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 13.113 (1) Å | µ = 1.85 mm−1 |
b = 20.926 (2) Å | T = 298 K |
c = 10.6378 (8) Å | 0.32 × 0.25 × 0.22 mm |
Stoe STADI4 diffractometer | 2303 reflections with I > 2σ(I) |
Absorption correction: numerical (Stoe & Cie, 1996) | Rint = 0.079 |
Tmin = 0.665, Tmax = 0.824 | 3 standard reflections every 60 min |
3548 measured reflections | intensity decay: 5% |
3324 independent reflections |
R[F2 > 2σ(F2)] = 0.057 | 0 restraints |
wR(F2) = 0.136 | H-atom parameters constrained |
S = 1.16 | w = 1/[σ2(Fo2) + (0.0328P)2 + 10.1201P] where P = (Fo2 + 2Fc2)/3 |
3324 reflections | Δρmax = 0.79 e Å−3 |
172 parameters | Δρmin = −0.46 e Å−3 |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cu | 0.26364 (4) | 0.07289 (3) | 0.11319 (6) | 0.03140 (18) | |
Cl1 | 0.11411 (10) | 0.10097 (8) | 0.02276 (14) | 0.0462 (4) | |
Cl2 | 0.24750 (10) | 0.10513 (8) | 0.33645 (13) | 0.0478 (4) | |
N1 | 0.2290 (3) | −0.0194 (2) | 0.1416 (4) | 0.0327 (10) | |
N2 | 0.4110 (3) | 0.0356 (2) | 0.1274 (4) | 0.0283 (9) | |
N3 | 0.3451 (3) | 0.1502 (2) | 0.0595 (4) | 0.0379 (10) | |
C1 | 0.1404 (4) | −0.0489 (3) | 0.1165 (5) | 0.0388 (12) | |
H1 | 0.0872 | −0.0253 | 0.0821 | 0.047* | |
C2 | 0.1256 (5) | −0.1129 (3) | 0.1398 (6) | 0.0499 (15) | |
H2 | 0.0627 | −0.1318 | 0.1241 | 0.060* | |
C3 | 0.2043 (5) | −0.1481 (3) | 0.1860 (6) | 0.0517 (16) | |
H3 | 0.1963 | −0.1917 | 0.2003 | 0.062* | |
C4 | 0.2958 (5) | −0.1187 (3) | 0.2115 (6) | 0.0475 (15) | |
H4 | 0.3504 | −0.1421 | 0.2431 | 0.057* | |
C5 | 0.3058 (4) | −0.0541 (3) | 0.1897 (5) | 0.0345 (12) | |
C6 | 0.4447 (4) | 0.1471 (3) | 0.0930 (6) | 0.0402 (13) | |
C7 | 0.5138 (5) | 0.1933 (3) | 0.0561 (8) | 0.063 (2) | |
H7 | 0.5822 | 0.1898 | 0.0780 | 0.076* | |
C8 | 0.4801 (6) | 0.2440 (4) | −0.0129 (9) | 0.074 (2) | |
H8 | 0.5253 | 0.2760 | −0.0370 | 0.089* | |
C9 | 0.3793 (6) | 0.2477 (3) | −0.0467 (7) | 0.0626 (18) | |
H9 | 0.3556 | 0.2819 | −0.0941 | 0.075* | |
C10 | 0.3141 (5) | 0.2002 (3) | −0.0096 (6) | 0.0501 (15) | |
H10 | 0.2459 | 0.2027 | −0.0331 | 0.060* | |
C11 | 0.4000 (4) | −0.0166 (3) | 0.2199 (5) | 0.0358 (12) | |
H11A | 0.3951 | 0.0010 | 0.3040 | 0.043* | |
H11B | 0.4593 | −0.0443 | 0.2166 | 0.043* | |
C12 | 0.4716 (4) | 0.0906 (3) | 0.1722 (5) | 0.0381 (13) | |
H12A | 0.5439 | 0.0813 | 0.1649 | 0.046* | |
H12B | 0.4563 | 0.0993 | 0.2597 | 0.046* | |
C13 | 0.4447 (3) | 0.0120 (2) | 0.0013 (5) | 0.0302 (11) | |
H13A | 0.4376 | 0.0463 | −0.0593 | 0.036* | |
H13B | 0.4000 | −0.0225 | −0.0247 | 0.036* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu | 0.0208 (3) | 0.0419 (4) | 0.0315 (3) | 0.0037 (3) | −0.0006 (2) | −0.0027 (3) |
Cl1 | 0.0300 (6) | 0.0605 (9) | 0.0481 (8) | 0.0096 (6) | −0.0093 (6) | 0.0011 (7) |
Cl2 | 0.0339 (7) | 0.0755 (10) | 0.0342 (6) | −0.0020 (7) | 0.0014 (6) | −0.0172 (7) |
N1 | 0.022 (2) | 0.045 (3) | 0.032 (2) | 0.0020 (18) | −0.0004 (17) | −0.0004 (19) |
N2 | 0.0193 (18) | 0.039 (2) | 0.027 (2) | 0.0000 (17) | 0.0002 (16) | −0.0019 (19) |
N3 | 0.036 (2) | 0.038 (3) | 0.040 (3) | 0.003 (2) | 0.005 (2) | −0.004 (2) |
C1 | 0.028 (2) | 0.051 (3) | 0.037 (3) | −0.002 (2) | 0.002 (2) | −0.004 (3) |
C2 | 0.042 (3) | 0.062 (4) | 0.045 (3) | −0.015 (3) | 0.000 (3) | −0.007 (3) |
C3 | 0.067 (4) | 0.046 (4) | 0.042 (3) | −0.013 (3) | −0.002 (3) | 0.000 (3) |
C4 | 0.050 (3) | 0.050 (4) | 0.042 (3) | 0.003 (3) | −0.008 (3) | 0.010 (3) |
C5 | 0.029 (3) | 0.050 (3) | 0.024 (2) | −0.001 (2) | 0.001 (2) | 0.004 (2) |
C6 | 0.032 (3) | 0.039 (3) | 0.050 (3) | −0.003 (2) | 0.004 (2) | −0.011 (3) |
C7 | 0.047 (4) | 0.044 (4) | 0.099 (6) | −0.009 (3) | 0.005 (4) | −0.010 (4) |
C8 | 0.070 (5) | 0.039 (4) | 0.114 (7) | −0.018 (4) | 0.005 (5) | 0.001 (4) |
C9 | 0.083 (5) | 0.033 (3) | 0.072 (5) | 0.002 (4) | −0.006 (4) | 0.002 (3) |
C10 | 0.053 (4) | 0.038 (3) | 0.060 (4) | 0.008 (3) | 0.000 (3) | −0.005 (3) |
C11 | 0.028 (2) | 0.047 (3) | 0.033 (3) | 0.007 (2) | −0.006 (2) | 0.008 (2) |
C12 | 0.024 (2) | 0.048 (3) | 0.043 (3) | 0.000 (2) | 0.001 (2) | −0.013 (3) |
C13 | 0.024 (2) | 0.038 (3) | 0.028 (2) | 0.002 (2) | 0.0004 (19) | −0.001 (2) |
Cu—N1 | 2.006 (4) | C4—C5 | 1.378 (8) |
Cu—N3 | 2.020 (5) | C4—H4 | 0.9300 |
Cu—N2 | 2.089 (4) | C5—C11 | 1.499 (7) |
Cu—Cl1 | 2.262 (1) | C6—C7 | 1.381 (8) |
Cu—Cl2 | 2.478 (1) | C6—C12 | 1.494 (8) |
Cu—Cui | 7.932 (1) | C7—C8 | 1.365 (10) |
N1—C5 | 1.342 (6) | C7—H7 | 0.9300 |
N1—C1 | 1.344 (6) | C8—C9 | 1.372 (10) |
N2—C11 | 1.477 (6) | C8—H8 | 0.9300 |
N2—C12 | 1.478 (6) | C9—C10 | 1.369 (9) |
N2—C13 | 1.497 (6) | C9—H9 | 0.9300 |
N3—C10 | 1.342 (7) | C10—H10 | 0.9300 |
N3—C6 | 1.356 (7) | C11—H11A | 0.9700 |
C1—C2 | 1.375 (8) | C11—H11B | 0.9700 |
C1—H1 | 0.9300 | C12—H12A | 0.9700 |
C2—C3 | 1.359 (9) | C12—H12B | 0.9700 |
C2—H2 | 0.9300 | C13—C13ii | 1.534 (9) |
C3—C4 | 1.377 (8) | C13—H13A | 0.9700 |
C3—H3 | 0.9300 | C13—H13B | 0.9700 |
N1—Cu—N3 | 158.8 (2) | N1—C5—C11 | 114.6 (5) |
N1—Cu—N2 | 80.7 (2) | C4—C5—C11 | 123.8 (5) |
N3—Cu—N2 | 80.3 (2) | N3—C6—C7 | 121.6 (6) |
N1—Cu—Cl1 | 96.8 (1) | N3—C6—C12 | 114.4 (5) |
N3—Cu—Cl1 | 97.5 (1) | C7—C6—C12 | 124.0 (5) |
N2—Cu—Cl1 | 158.4 (1) | C8—C7—C6 | 119.0 (6) |
N1—Cu—Cl2 | 95.6 (1) | C8—C7—H7 | 120.5 |
N3—Cu—Cl2 | 95.6 (1) | C6—C7—H7 | 120.5 |
N2—Cu—Cl2 | 96.4 (1) | C7—C8—C9 | 119.7 (7) |
Cl1—Cu—Cl2 | 105.24 (6) | C7—C8—H8 | 120.1 |
C5—N1—C1 | 118.4 (5) | C9—C8—H8 | 120.1 |
C5—N1—Cu | 114.1 (3) | C10—C9—C8 | 119.1 (7) |
C1—N1—Cu | 127.5 (4) | C10—C9—H9 | 120.5 |
C11—N2—C12 | 114.4 (4) | C8—C9—H9 | 120.5 |
C11—N2—C13 | 112.4 (4) | N3—C10—C9 | 122.3 (6) |
C12—N2—C13 | 112.8 (4) | N3—C10—H10 | 118.8 |
C11—N2—Cu | 103.6 (3) | C9—C10—H10 | 118.8 |
C12—N2—Cu | 103.3 (3) | N2—C11—C5 | 108.9 (4) |
C13—N2—Cu | 109.4 (3) | N2—C11—H11A | 109.9 |
C10—N3—C6 | 118.2 (5) | C5—C11—H11A | 109.9 |
C10—N3—Cu | 128.3 (4) | N2—C11—H11B | 109.9 |
C6—N3—Cu | 113.4 (4) | C5—C11—H11B | 109.9 |
N1—C1—C2 | 122.3 (5) | H11A—C11—H11B | 108.3 |
N1—C1—H1 | 118.9 | N2—C12—C6 | 107.9 (4) |
C2—C1—H1 | 118.9 | N2—C12—H12A | 110.1 |
C3—C2—C1 | 119.1 (6) | C6—C12—H12A | 110.1 |
C3—C2—H2 | 120.4 | N2—C12—H12B | 110.1 |
C1—C2—H2 | 120.4 | C6—C12—H12B | 110.1 |
C2—C3—C4 | 119.3 (6) | H12A—C12—H12B | 108.4 |
C2—C3—H3 | 120.3 | N2—C13—C13ii | 113.8 (5) |
C4—C3—H3 | 120.3 | N2—C13—H13A | 108.8 |
C3—C4—C5 | 119.3 (6) | C13ii—C13—H13A | 108.8 |
C3—C4—H4 | 120.4 | N2—C13—H13B | 108.8 |
C5—C4—H4 | 120.4 | C13ii—C13—H13B | 108.8 |
N1—C5—C4 | 121.6 (5) | H13A—C13—H13B | 107.7 |
Symmetry codes: (i) −x, −y, −z; (ii) −x+1, −y, −z. |
Experimental details
Crystal data | |
Chemical formula | [Cu2Cl4(C26H28N6)] |
Mr | 693.42 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 298 |
a, b, c (Å) | 13.113 (1), 20.926 (2), 10.6378 (8) |
V (Å3) | 2919.1 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.85 |
Crystal size (mm) | 0.32 × 0.25 × 0.22 |
Data collection | |
Diffractometer | Stoe STADI4 diffractometer |
Absorption correction | Numerical (Stoe & Cie, 1996) |
Tmin, Tmax | 0.665, 0.824 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3548, 3324, 2303 |
Rint | 0.079 |
(sin θ/λ)max (Å−1) | 0.647 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.057, 0.136, 1.16 |
No. of reflections | 3324 |
No. of parameters | 172 |
H-atom treatment | H-atom parameters constrained |
w = 1/[σ2(Fo2) + (0.0328P)2 + 10.1201P] where P = (Fo2 + 2Fc2)/3 | |
Δρmax, Δρmin (e Å−3) | 0.79, −0.46 |
Computer programs: STADI4 (Stoe & Cie, 1996), STADI4, X-RED (Stoe & Cie, 1996), SHELXS97-2 (Sheldrick, 1997), SHELXL97-2 (Sheldrick, 1997), ORTEP-3 (Farrugia, 1997).
Cu—N1 | 2.006 (4) | Cu—Cl1 | 2.262 (1) |
Cu—N3 | 2.020 (5) | Cu—Cl2 | 2.478 (1) |
Cu—N2 | 2.089 (4) | ||
N1—Cu—N3 | 158.8 (2) | N2—Cu—Cl1 | 158.4 (1) |
N1—Cu—N2 | 80.7 (2) | N1—Cu—Cl2 | 95.6 (1) |
N3—Cu—N2 | 80.3 (2) | N3—Cu—Cl2 | 95.6 (1) |
N1—Cu—Cl1 | 96.8 (1) | N2—Cu—Cl2 | 96.4 (1) |
N3—Cu—Cl1 | 97.5 (1) | Cl1—Cu—Cl2 | 105.24 (6) |
The most interesting aspects in the coordination chemistry of copper(II) is the variety of coordination geometries possible fof the central CuII atom (Anderson et al., 1976). N,N,N',N'-Tetrakis(2-pyridylmethyl)-1,2-ethylenediamine (referred to as tpen) is a hexadentate ligand. It is expected to form a mononuclear hexadentate octahedral complex. However, because of the steric crowding in mononuclear copper(II) complexes, the formation of dinuclear copper(II) complexes is also possible (Karlin et al., 1992; Mahapatra et al., 1997; Casella et al., 1988; Farrugia et al., 1997). Recently, dinucleartransition metal complexes containing CuII with various chelating ligands related to tpen were reported (Jensen et al., 1997). Furthermore, the high reactivities of the chloro ligand which coordinate to CuII make the complexes useful as a starting material for various reactions.
We report here the crystal structure of the centrosymmetric title complex, (I). In the title complex (Fig. 1), where the dinuclear CuII is contained as a central dimetal unit which are connected by a tpen bridge and with four chloro ligands coordinated. In the crystal structure, each CuII is clearly five-coordinated with approximate square-pyramidal geometry. Bond distances and angles are summarized in Table 1. Four of the coordinating atoms, i.e. one of the Cl atoms (Cl1) and the three N atoms of the tpen ligand, lie at the corners of a distorted square plane around CuII. The second Cl atom (Cl2) occupies the apical position of the square pyramid. The Cu—Cl bond lengths are not identical and are 2.2618 (14) and 2.4781 (14) Å. The Cu—N bond lengths are 2.006 (4), 2.020 (5) and 2.089 (4) Å. Comparing the Cu—Cl bonds, it is found that the length of the Cu—Cl apical bond is significantly longer than that of the basal one (2.478 Å versus 2.262 Å). This axial expansion may be due to the influence of the d9 electronic distribution on the coordination geometry (Anderson, 1976). In addition to atomic distance, it is noteworthy to mention angles. The Cl1—Cu—Cl2 [105.24 (6)°] bond angle is greater than the other bond angles [Cl2—Cu—N1 95.6 (1)°, Cl2—Cu—N2 96.4 (1)° and Cl2—Cu—N3 95.63 (14)°]. This is believed to be a result of repulsion by the lone-pair electrons of Cl1 and Cl2. Two intermolecular C—H···Cl interactions are present in the crystal structure. Also, the Cu···Cu non-bonding distance for the (I) was 7.932 (1) Å.