Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536803005890/bt6252sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536803005890/bt62522sup2.hkl |
CCDC reference: 209889
Key indicators
- Single-crystal X-ray study
- T = 143 K
- Mean (C-C) = 0.005 Å
- R factor = 0.029
- wR factor = 0.068
- Data-to-parameter ratio = 13.8
checkCIF results
No syntax errors found ADDSYM reports no extra symmetry
Alert Level B:
ABSTM_02 Alert B The ratio of expected to reported Tmax/Tmin(RR) is > 1.50 Tmin and Tmax reported: 0.670 0.984 Tmin and Tmax expected: 0.302 0.688 RR = 1.553 Please check that your absorption correction is appropriate. General Notes
ABSTM_02 When printed, the submitted absorption T values will be replaced by the scaled T values. Since the ratio of scaled T's is identical to the ratio of reported T values, the scaling does not imply a change to the absorption corrections used in the study. Ratio of Tmax expected/reported 0.700 Tmax scaled 0.688 Tmin scaled 0.469
0 Alert Level A = Potentially serious problem
1 Alert Level B = Potential problem
0 Alert Level C = Please check
Crystals of (2) were obtained fortuitously on adding pyridine to the combined `waste' solutions from completed kinetic experiments (which had been retained for recycling) (Beckmann, 1998). Crystals began to grow from an aqueous solution (also containing N-ethylmorpholine buffer and KCl) some days after
adding pyridine.
H atoms of NH groups were identified in difference syntheses and refined freely, but with a common N—H distance restraint. Other H atoms were included using a riding model with fixed C—H bond lengths of 1.00 (CH) or 0.99 Å (CH2); Uiso(H) values were fixed at 1.2Ueq of the parent atom. One curious feature of the structure is the very short bond C5—C6, which at 1.442 (5) Å is much shorter than the corresponding bond in the previous paper, 1.524 (3) Å. We attribute this to libration effects arising from the appreciably higher U values of C5 and C6, or to a slight disorder of these atoms.
Data collection: DIF4 (Stoe & Cie, 1992); cell refinement: DIF4; data reduction: REDU4 (Stoe & Cie, 1992); program(s) used to solve structure: SHELXS97 (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: XP (Siemens, 1994); software used to prepare material for publication: SHELXL97.
[Zn2(C13H22N3O4)2][ZnCl3(C5H4N)]2 | F(000) = 1224 |
Mr = 1201.05 | Dx = 1.750 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 54 reflections |
a = 9.5416 (15) Å | θ = 10–11.5° |
b = 17.491 (2) Å | µ = 2.49 mm−1 |
c = 14.098 (3) Å | T = 143 K |
β = 104.366 (10)° | Tablet, colourless |
V = 2279.2 (7) Å3 | 0.5 × 0.45 × 0.15 mm |
Z = 2 |
Stoe STADI-4 diffractometer | 3390 reflections with I > 2s(I) |
Radiation source: fine-focus sealed tube | Rint = 0.035 |
Graphite monochromator | θmax = 25.0°, θmin = 3.2° |
ω/θ–scans | h = −11→11 |
Absorption correction: ψ scans (XEMP; Siemens, 1994) | k = −20→20 |
Tmin = 0.670, Tmax = 0.984 | l = 0→16 |
8250 measured reflections | 3 standard reflections every 60 min |
4031 independent reflections | intensity decay: 4% |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.029 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.069 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0268P)2 + 1.2592P] where P = (Fo2 + 2Fc2)/3 |
4031 reflections | (Δ/σ)max < 0.001 |
292 parameters | Δρmax = 0.47 e Å−3 |
3 restraints | Δρmin = −0.38 e Å−3 |
[Zn2(C13H22N3O4)2][ZnCl3(C5H4N)]2 | V = 2279.2 (7) Å3 |
Mr = 1201.05 | Z = 2 |
Monoclinic, P21/c | Mo Kα radiation |
a = 9.5416 (15) Å | µ = 2.49 mm−1 |
b = 17.491 (2) Å | T = 143 K |
c = 14.098 (3) Å | 0.5 × 0.45 × 0.15 mm |
β = 104.366 (10)° |
Stoe STADI-4 diffractometer | 3390 reflections with I > 2s(I) |
Absorption correction: ψ scans (XEMP; Siemens, 1994) | Rint = 0.035 |
Tmin = 0.670, Tmax = 0.984 | 3 standard reflections every 60 min |
8250 measured reflections | intensity decay: 4% |
4031 independent reflections |
R[F2 > 2σ(F2)] = 0.029 | 3 restraints |
wR(F2) = 0.069 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 0.47 e Å−3 |
4031 reflections | Δρmin = −0.38 e Å−3 |
292 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Zn1 | 0.91734 (4) | 0.571013 (18) | 0.44236 (2) | 0.02080 (10) | |
N1 | 1.0368 (3) | 0.62766 (14) | 0.35878 (18) | 0.0228 (5) | |
H01 | 1.117 (3) | 0.6281 (17) | 0.396 (2) | 0.024 (9)* | |
N2 | 0.8144 (3) | 0.67003 (15) | 0.4767 (2) | 0.0299 (6) | |
H02 | 0.798 (3) | 0.6616 (18) | 0.5288 (18) | 0.025 (9)* | |
N3 | 0.7508 (3) | 0.53112 (15) | 0.32799 (18) | 0.0236 (5) | |
H03 | 0.733 (3) | 0.4924 (14) | 0.355 (2) | 0.021 (9)* | |
O1 | 0.9238 (2) | 0.41052 (12) | 0.17158 (15) | 0.0318 (5) | |
O2 | 1.1323 (2) | 0.48262 (13) | 0.19182 (16) | 0.0340 (5) | |
O3 | 0.9116 (2) | 0.53528 (12) | 0.11301 (15) | 0.0326 (5) | |
O4 | 1.0343 (2) | 0.47328 (11) | 0.42589 (14) | 0.0241 (4) | |
C1 | 0.8035 (3) | 0.50532 (16) | 0.2431 (2) | 0.0235 (6) | |
H1 | 0.7170 | 0.4914 | 0.1897 | 0.028* | |
C2 | 0.8874 (3) | 0.56684 (17) | 0.2026 (2) | 0.0226 (6) | |
H2 | 0.8278 | 0.6144 | 0.1877 | 0.027* | |
C3 | 1.0378 (3) | 0.58641 (17) | 0.2671 (2) | 0.0245 (7) | |
H3 | 1.0871 | 0.6200 | 0.2278 | 0.029* | |
C4 | 0.9922 (4) | 0.70875 (18) | 0.3387 (2) | 0.0362 (8) | |
H4A | 0.8920 | 0.7102 | 0.2971 | 0.043* | |
H4B | 1.0559 | 0.7330 | 0.3017 | 0.043* | |
C5 | 0.9989 (5) | 0.7544 (2) | 0.4308 (3) | 0.0610 (12) | |
H5A | 1.1020 | 0.7567 | 0.4668 | 0.073* | |
H5B | 0.9699 | 0.8073 | 0.4096 | 0.073* | |
C6 | 0.9187 (5) | 0.7337 (2) | 0.5012 (3) | 0.0583 (11) | |
H6A | 0.8653 | 0.7795 | 0.5139 | 0.070* | |
H6B | 0.9894 | 0.7207 | 0.5633 | 0.070* | |
C7 | 0.6733 (4) | 0.69055 (19) | 0.4128 (2) | 0.0357 (8) | |
H7A | 0.6882 | 0.7178 | 0.3545 | 0.043* | |
H7B | 0.6228 | 0.7258 | 0.4482 | 0.043* | |
C8 | 0.5795 (4) | 0.6211 (2) | 0.3800 (3) | 0.0404 (9) | |
H8A | 0.4773 | 0.6378 | 0.3590 | 0.049* | |
H8B | 0.5884 | 0.5865 | 0.4367 | 0.049* | |
C9 | 0.6165 (3) | 0.57671 (19) | 0.2968 (2) | 0.0339 (8) | |
H9A | 0.5352 | 0.5420 | 0.2677 | 0.041* | |
H9B | 0.6274 | 0.6131 | 0.2453 | 0.041* | |
C10 | 0.9947 (4) | 0.4676 (2) | 0.1319 (2) | 0.0350 (8) | |
H10 | 1.0076 | 0.4483 | 0.0679 | 0.042* | |
C11 | 0.9011 (3) | 0.43465 (17) | 0.2645 (2) | 0.0261 (7) | |
H11 | 0.8506 | 0.3932 | 0.2919 | 0.031* | |
C12 | 1.0487 (3) | 0.45019 (17) | 0.3346 (2) | 0.0240 (6) | |
H12 | 1.1077 | 0.4023 | 0.3423 | 0.029* | |
C13 | 1.1229 (3) | 0.51127 (18) | 0.2867 (2) | 0.0269 (7) | |
H13 | 1.2222 | 0.5213 | 0.3285 | 0.032* | |
Zn2 | 0.55898 (4) | 0.29695 (2) | 0.33708 (2) | 0.02471 (10) | |
Cl1 | 0.70807 (10) | 0.19961 (5) | 0.33195 (6) | 0.0420 (2) | |
Cl2 | 0.33240 (8) | 0.26753 (5) | 0.34444 (6) | 0.03215 (19) | |
Cl3 | 0.65690 (9) | 0.38564 (5) | 0.45101 (6) | 0.0352 (2) | |
N4 | 0.5270 (3) | 0.34672 (14) | 0.20015 (17) | 0.0255 (6) | |
C20 | 0.4145 (3) | 0.39309 (19) | 0.1681 (2) | 0.0336 (8) | |
H20 | 0.3556 | 0.4060 | 0.2110 | 0.040* | |
C21 | 0.3809 (4) | 0.4229 (2) | 0.0750 (3) | 0.0437 (9) | |
H21 | 0.3009 | 0.4566 | 0.0544 | 0.052* | |
C22 | 0.4643 (4) | 0.4036 (2) | 0.0123 (3) | 0.0455 (10) | |
H22 | 0.4410 | 0.4224 | −0.0530 | 0.055* | |
C23 | 0.5817 (4) | 0.3568 (2) | 0.0449 (2) | 0.0396 (9) | |
H23 | 0.6431 | 0.3439 | 0.0036 | 0.048* | |
C24 | 0.6084 (3) | 0.32891 (18) | 0.1391 (2) | 0.0292 (7) | |
H24 | 0.6884 | 0.2955 | 0.1614 | 0.035* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.02457 (18) | 0.02292 (18) | 0.01495 (17) | 0.00391 (14) | 0.00496 (13) | 0.00259 (14) |
N1 | 0.0199 (13) | 0.0264 (13) | 0.0203 (13) | −0.0012 (11) | 0.0018 (11) | 0.0009 (11) |
N2 | 0.0402 (16) | 0.0307 (15) | 0.0198 (14) | 0.0073 (12) | 0.0094 (12) | 0.0010 (12) |
N3 | 0.0254 (13) | 0.0222 (14) | 0.0236 (14) | 0.0009 (11) | 0.0072 (11) | 0.0029 (11) |
O1 | 0.0483 (14) | 0.0280 (12) | 0.0192 (11) | 0.0035 (10) | 0.0086 (10) | −0.0046 (9) |
O2 | 0.0387 (13) | 0.0427 (14) | 0.0268 (12) | 0.0102 (11) | 0.0201 (11) | 0.0020 (10) |
O3 | 0.0472 (14) | 0.0363 (13) | 0.0145 (11) | 0.0083 (11) | 0.0082 (10) | 0.0024 (9) |
O4 | 0.0328 (11) | 0.0254 (11) | 0.0137 (10) | 0.0086 (9) | 0.0052 (9) | 0.0012 (8) |
C1 | 0.0240 (15) | 0.0257 (16) | 0.0188 (15) | 0.0001 (12) | 0.0014 (12) | −0.0014 (12) |
C2 | 0.0270 (15) | 0.0268 (16) | 0.0148 (14) | 0.0056 (12) | 0.0067 (12) | 0.0019 (12) |
C3 | 0.0253 (16) | 0.0289 (16) | 0.0217 (16) | −0.0009 (12) | 0.0102 (13) | 0.0047 (13) |
C4 | 0.056 (2) | 0.0265 (17) | 0.0311 (19) | 0.0026 (16) | 0.0210 (17) | 0.0090 (14) |
C5 | 0.098 (3) | 0.035 (2) | 0.061 (3) | −0.021 (2) | 0.038 (3) | −0.016 (2) |
C6 | 0.069 (3) | 0.063 (3) | 0.050 (3) | −0.019 (2) | 0.026 (2) | −0.024 (2) |
C7 | 0.048 (2) | 0.0378 (19) | 0.0242 (17) | 0.0248 (16) | 0.0137 (15) | 0.0047 (15) |
C8 | 0.0270 (17) | 0.064 (2) | 0.0321 (19) | 0.0152 (17) | 0.0110 (15) | 0.0016 (17) |
C9 | 0.0201 (15) | 0.045 (2) | 0.0333 (19) | 0.0054 (14) | 0.0003 (14) | −0.0026 (15) |
C10 | 0.046 (2) | 0.043 (2) | 0.0178 (16) | 0.0126 (16) | 0.0106 (15) | 0.0002 (15) |
C11 | 0.0346 (17) | 0.0249 (16) | 0.0198 (15) | 0.0012 (13) | 0.0089 (13) | −0.0011 (13) |
C12 | 0.0280 (16) | 0.0255 (16) | 0.0190 (15) | 0.0103 (13) | 0.0069 (13) | 0.0013 (12) |
C13 | 0.0242 (16) | 0.0380 (18) | 0.0192 (16) | 0.0071 (13) | 0.0063 (13) | −0.0010 (13) |
Zn2 | 0.02293 (19) | 0.0324 (2) | 0.01939 (19) | 0.00034 (15) | 0.00636 (14) | 0.00079 (15) |
Cl1 | 0.0425 (5) | 0.0506 (5) | 0.0359 (5) | 0.0195 (4) | 0.0154 (4) | 0.0044 (4) |
Cl2 | 0.0265 (4) | 0.0461 (5) | 0.0262 (4) | −0.0075 (3) | 0.0109 (3) | −0.0082 (3) |
Cl3 | 0.0405 (5) | 0.0406 (5) | 0.0234 (4) | −0.0131 (4) | 0.0057 (3) | −0.0024 (3) |
N4 | 0.0228 (13) | 0.0323 (14) | 0.0205 (13) | −0.0033 (11) | 0.0037 (11) | −0.0010 (11) |
C20 | 0.0283 (17) | 0.0392 (19) | 0.0321 (19) | 0.0021 (14) | 0.0054 (14) | 0.0017 (15) |
C21 | 0.037 (2) | 0.048 (2) | 0.041 (2) | 0.0027 (17) | −0.0013 (17) | 0.0141 (18) |
C22 | 0.057 (2) | 0.053 (2) | 0.0203 (18) | −0.0144 (19) | −0.0016 (17) | 0.0081 (16) |
C23 | 0.050 (2) | 0.049 (2) | 0.0248 (18) | −0.0166 (18) | 0.0179 (16) | −0.0060 (16) |
C24 | 0.0292 (17) | 0.0340 (17) | 0.0265 (17) | −0.0041 (14) | 0.0109 (14) | −0.0046 (14) |
Zn1—O4i | 1.9590 (19) | C5—H5A | 0.9900 |
Zn1—N1 | 2.082 (2) | C5—H5B | 0.9900 |
Zn1—N3 | 2.083 (3) | C6—H6A | 0.9900 |
Zn1—O4 | 2.0860 (19) | C6—H6B | 0.9900 |
Zn1—N2 | 2.106 (3) | C7—C8 | 1.511 (5) |
N1—C3 | 1.483 (4) | C7—H7A | 0.9900 |
N1—C4 | 1.488 (4) | C7—H7B | 0.9900 |
N1—H01 | 0.81 (2) | C8—C9 | 1.520 (4) |
N2—C7 | 1.467 (4) | C8—H8A | 0.9900 |
N2—C6 | 1.477 (5) | C8—H8B | 0.9900 |
N2—H02 | 0.80 (2) | C9—H9A | 0.9900 |
N3—C1 | 1.479 (4) | C9—H9B | 0.9900 |
N3—C9 | 1.480 (4) | C10—H10 | 1.0000 |
N3—H03 | 0.82 (2) | C11—C12 | 1.531 (4) |
O1—C10 | 1.398 (4) | C11—H11 | 1.0000 |
O1—C11 | 1.443 (3) | C12—C13 | 1.528 (4) |
O2—C10 | 1.399 (4) | C12—H12 | 1.0000 |
O2—C13 | 1.452 (4) | C13—H13 | 1.0000 |
O3—C10 | 1.414 (4) | Zn2—N4 | 2.070 (2) |
O3—C2 | 1.449 (3) | Zn2—Cl1 | 2.2314 (9) |
O4—C12 | 1.388 (3) | Zn2—Cl2 | 2.2496 (9) |
O4—Zn1i | 1.9590 (19) | Zn2—Cl3 | 2.2615 (9) |
C1—C11 | 1.532 (4) | N4—C20 | 1.332 (4) |
C1—C2 | 1.533 (4) | N4—C24 | 1.332 (4) |
C1—H1 | 1.0000 | C20—C21 | 1.375 (5) |
C2—C3 | 1.534 (4) | C20—H20 | 0.9500 |
C2—H2 | 1.0000 | C21—C22 | 1.371 (5) |
C3—C13 | 1.533 (4) | C21—H21 | 0.9500 |
C3—H3 | 1.0000 | C22—C23 | 1.372 (5) |
C4—C5 | 1.512 (5) | C22—H22 | 0.9500 |
C4—H4A | 0.9900 | C23—C24 | 1.377 (4) |
C4—H4B | 0.9900 | C23—H23 | 0.9500 |
C5—C6 | 1.442 (5) | C24—H24 | 0.9500 |
O4i—Zn1—N1 | 133.76 (9) | N2—C6—H6B | 107.8 |
O4i—Zn1—N3 | 123.80 (10) | H6A—C6—H6B | 107.1 |
N1—Zn1—N3 | 98.10 (10) | N2—C7—C8 | 112.0 (3) |
O4i—Zn1—O4 | 76.99 (8) | N2—C7—H7A | 109.2 |
N1—Zn1—O4 | 86.78 (9) | C8—C7—H7A | 109.2 |
N3—Zn1—O4 | 88.04 (9) | N2—C7—H7B | 109.2 |
O4i—Zn1—N2 | 96.93 (9) | C8—C7—H7B | 109.2 |
N1—Zn1—N2 | 95.22 (10) | H7A—C7—H7B | 107.9 |
N3—Zn1—N2 | 98.26 (10) | C7—C8—C9 | 114.4 (3) |
O4—Zn1—N2 | 173.04 (9) | C7—C8—H8A | 108.7 |
C3—N1—C4 | 111.2 (2) | C9—C8—H8A | 108.7 |
C3—N1—Zn1 | 112.64 (18) | C7—C8—H8B | 108.7 |
C4—N1—Zn1 | 112.96 (19) | C9—C8—H8B | 108.7 |
C3—N1—H01 | 111 (2) | H8A—C8—H8B | 107.6 |
C4—N1—H01 | 107 (2) | N3—C9—C8 | 113.3 (3) |
Zn1—N1—H01 | 102 (2) | N3—C9—H9A | 108.9 |
C7—N2—C6 | 115.0 (3) | C8—C9—H9A | 108.9 |
C7—N2—Zn1 | 118.0 (2) | N3—C9—H9B | 108.9 |
C6—N2—Zn1 | 110.3 (2) | C8—C9—H9B | 108.9 |
C7—N2—H02 | 105 (2) | H9A—C9—H9B | 107.7 |
C6—N2—H02 | 101 (2) | O1—C10—O2 | 111.6 (2) |
Zn1—N2—H02 | 105 (2) | O1—C10—O3 | 111.6 (3) |
C1—N3—C9 | 111.5 (2) | O2—C10—O3 | 110.8 (3) |
C1—N3—Zn1 | 112.41 (18) | O1—C10—H10 | 107.5 |
C9—N3—Zn1 | 119.17 (19) | O2—C10—H10 | 107.5 |
C1—N3—H03 | 106 (2) | O3—C10—H10 | 107.5 |
C9—N3—H03 | 109 (2) | O1—C11—C12 | 108.5 (2) |
Zn1—N3—H03 | 97 (2) | O1—C11—C1 | 106.1 (2) |
C10—O1—C11 | 110.5 (2) | C12—C11—C1 | 113.6 (2) |
C10—O2—C13 | 111.0 (2) | O1—C11—H11 | 109.5 |
C10—O3—C2 | 111.0 (2) | C12—C11—H11 | 109.5 |
C12—O4—Zn1i | 135.25 (17) | C1—C11—H11 | 109.5 |
C12—O4—Zn1 | 121.35 (16) | O4—C12—C13 | 111.7 (2) |
Zn1i—O4—Zn1 | 103.01 (8) | O4—C12—C11 | 111.3 (2) |
N3—C1—C11 | 113.5 (2) | C13—C12—C11 | 107.0 (2) |
N3—C1—C2 | 113.6 (2) | O4—C12—H12 | 108.9 |
C11—C1—C2 | 107.0 (2) | C13—C12—H12 | 108.9 |
N3—C1—H1 | 107.5 | C11—C12—H12 | 108.9 |
C11—C1—H1 | 107.5 | O2—C13—C12 | 107.9 (2) |
C2—C1—H1 | 107.5 | O2—C13—C3 | 106.3 (2) |
O3—C2—C1 | 105.5 (2) | C12—C13—C3 | 113.4 (2) |
O3—C2—C3 | 105.9 (2) | O2—C13—H13 | 109.7 |
C1—C2—C3 | 115.8 (2) | C12—C13—H13 | 109.7 |
O3—C2—H2 | 109.8 | C3—C13—H13 | 109.7 |
C1—C2—H2 | 109.8 | N4—Zn2—Cl1 | 103.78 (7) |
C3—C2—H2 | 109.8 | N4—Zn2—Cl2 | 102.62 (7) |
N1—C3—C13 | 112.2 (2) | Cl1—Zn2—Cl2 | 117.04 (4) |
N1—C3—C2 | 114.6 (2) | N4—Zn2—Cl3 | 108.25 (7) |
C13—C3—C2 | 106.9 (2) | Cl1—Zn2—Cl3 | 113.08 (4) |
N1—C3—H3 | 107.6 | Cl2—Zn2—Cl3 | 110.89 (3) |
C13—C3—H3 | 107.6 | C20—N4—C24 | 118.3 (3) |
C2—C3—H3 | 107.6 | C20—N4—Zn2 | 119.5 (2) |
N1—C4—C5 | 113.1 (3) | C24—N4—Zn2 | 122.0 (2) |
N1—C4—H4A | 109.0 | N4—C20—C21 | 122.2 (3) |
C5—C4—H4A | 109.0 | N4—C20—H20 | 118.9 |
N1—C4—H4B | 109.0 | C21—C20—H20 | 118.9 |
C5—C4—H4B | 109.0 | C22—C21—C20 | 119.2 (3) |
H4A—C4—H4B | 107.8 | C22—C21—H21 | 120.4 |
C6—C5—C4 | 122.8 (3) | C20—C21—H21 | 120.4 |
C6—C5—H5A | 106.6 | C21—C22—C23 | 119.2 (3) |
C4—C5—H5A | 106.6 | C21—C22—H22 | 120.4 |
C6—C5—H5B | 106.6 | C23—C22—H22 | 120.4 |
C4—C5—H5B | 106.6 | C22—C23—C24 | 118.3 (3) |
H5A—C5—H5B | 106.6 | C22—C23—H23 | 120.8 |
C5—C6—N2 | 118.1 (3) | C24—C23—H23 | 120.8 |
C5—C6—H6A | 107.8 | N4—C24—C23 | 122.8 (3) |
N2—C6—H6A | 107.8 | N4—C24—H24 | 118.6 |
C5—C6—H6B | 107.8 | C23—C24—H24 | 118.6 |
O4i—Zn1—N1—C3 | 118.42 (19) | Zn1—N2—C6—C5 | 55.2 (5) |
N3—Zn1—N1—C3 | −37.7 (2) | C6—N2—C7—C8 | 172.4 (3) |
O4—Zn1—N1—C3 | 49.89 (19) | Zn1—N2—C7—C8 | 39.5 (3) |
N2—Zn1—N1—C3 | −136.80 (19) | N2—C7—C8—C9 | −79.1 (4) |
O4i—Zn1—N1—C4 | −114.5 (2) | C1—N3—C9—C8 | −165.2 (3) |
N3—Zn1—N1—C4 | 89.4 (2) | Zn1—N3—C9—C8 | −31.7 (4) |
O4—Zn1—N1—C4 | 176.9 (2) | C7—C8—C9—N3 | 74.4 (4) |
N2—Zn1—N1—C4 | −9.8 (2) | C11—O1—C10—O2 | 62.5 (3) |
O4i—Zn1—N2—C7 | −132.1 (2) | C11—O1—C10—O3 | −62.1 (3) |
N1—Zn1—N2—C7 | 92.6 (2) | C13—O2—C10—O1 | −62.5 (3) |
N3—Zn1—N2—C7 | −6.3 (2) | C13—O2—C10—O3 | 62.6 (3) |
O4i—Zn1—N2—C6 | 93.0 (2) | C2—O3—C10—O1 | 62.1 (3) |
N1—Zn1—N2—C6 | −42.3 (2) | C2—O3—C10—O2 | −63.0 (3) |
N3—Zn1—N2—C6 | −141.3 (2) | C10—O1—C11—C12 | −60.4 (3) |
O4i—Zn1—N3—C1 | −120.27 (18) | C10—O1—C11—C1 | 62.1 (3) |
N1—Zn1—N3—C1 | 39.1 (2) | N3—C1—C11—O1 | 171.3 (2) |
O4—Zn1—N3—C1 | −47.36 (19) | C2—C1—C11—O1 | −62.6 (3) |
N2—Zn1—N3—C1 | 135.62 (19) | N3—C1—C11—C12 | −69.6 (3) |
O4i—Zn1—N3—C9 | 106.5 (2) | C2—C1—C11—C12 | 56.5 (3) |
N1—Zn1—N3—C9 | −94.1 (2) | Zn1i—O4—C12—C13 | −128.5 (2) |
O4—Zn1—N3—C9 | 179.4 (2) | Zn1—O4—C12—C13 | 60.0 (3) |
N2—Zn1—N3—C9 | 2.4 (2) | Zn1i—O4—C12—C11 | 112.0 (3) |
O4i—Zn1—O4—C12 | 173.9 (3) | Zn1—O4—C12—C11 | −59.5 (3) |
N1—Zn1—O4—C12 | −49.7 (2) | O1—C11—C12—O4 | −179.6 (2) |
N3—Zn1—O4—C12 | 48.5 (2) | C1—C11—C12—O4 | 62.6 (3) |
O4i—Zn1—O4—Zn1i | 0.0 | O1—C11—C12—C13 | 58.1 (3) |
N1—Zn1—O4—Zn1i | 136.38 (10) | C1—C11—C12—C13 | −59.6 (3) |
N3—Zn1—O4—Zn1i | −125.39 (11) | C10—O2—C13—C12 | 60.1 (3) |
C9—N3—C1—C11 | −157.1 (3) | C10—O2—C13—C3 | −61.8 (3) |
Zn1—N3—C1—C11 | 66.1 (3) | O4—C12—C13—O2 | −179.6 (2) |
C9—N3—C1—C2 | 80.4 (3) | C11—C12—C13—O2 | −57.6 (3) |
Zn1—N3—C1—C2 | −56.4 (3) | O4—C12—C13—C3 | −62.2 (3) |
C10—O3—C2—C1 | −61.2 (3) | C11—C12—C13—C3 | 59.8 (3) |
C10—O3—C2—C3 | 62.0 (3) | N1—C3—C13—O2 | −172.2 (2) |
N3—C1—C2—O3 | −172.1 (2) | C2—C3—C13—O2 | 61.3 (3) |
C11—C1—C2—O3 | 61.9 (3) | N1—C3—C13—C12 | 69.4 (3) |
N3—C1—C2—C3 | 71.3 (3) | C2—C3—C13—C12 | −57.0 (3) |
C11—C1—C2—C3 | −54.8 (3) | Cl1—Zn2—N4—C20 | 161.8 (2) |
C4—N1—C3—C13 | 163.7 (3) | Cl2—Zn2—N4—C20 | 39.5 (2) |
Zn1—N1—C3—C13 | −68.3 (3) | Cl3—Zn2—N4—C20 | −77.8 (2) |
C4—N1—C3—C2 | −74.1 (3) | Cl1—Zn2—N4—C24 | −12.4 (2) |
Zn1—N1—C3—C2 | 53.9 (3) | Cl2—Zn2—N4—C24 | −134.7 (2) |
O3—C2—C3—N1 | 173.6 (2) | Cl3—Zn2—N4—C24 | 108.0 (2) |
C1—C2—C3—N1 | −69.9 (3) | C24—N4—C20—C21 | −0.3 (5) |
O3—C2—C3—C13 | −61.4 (3) | Zn2—N4—C20—C21 | −174.7 (3) |
C1—C2—C3—C13 | 55.1 (3) | N4—C20—C21—C22 | 1.0 (5) |
C3—N1—C4—C5 | −176.3 (3) | C20—C21—C22—C23 | −2.0 (5) |
Zn1—N1—C4—C5 | 55.9 (4) | C21—C22—C23—C24 | 2.1 (5) |
N1—C4—C5—C6 | −58.2 (6) | C20—N4—C24—C23 | 0.5 (5) |
C4—C5—C6—N2 | −6.7 (7) | Zn2—N4—C24—C23 | 174.7 (2) |
C7—N2—C6—C5 | −81.3 (5) | C22—C23—C24—N4 | −1.4 (5) |
Symmetry code: (i) −x+2, −y+1, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H01···Cl3i | 0.81 (2) | 2.66 (2) | 3.449 (3) | 165 (3) |
N2—H02···Cl2ii | 0.80 (2) | 2.72 (3) | 3.356 (3) | 138 (3) |
N3—H03···Cl3 | 0.82 (2) | 2.52 (2) | 3.325 (3) | 172 (3) |
C3—H3···Cl1iii | 1.00 | 2.70 | 3.664 (3) | 162 |
C23—H23···Cl1iv | 0.95 | 2.75 | 3.638 (3) | 156 |
C24—H24···Cl1 | 0.95 | 2.90 | 3.483 (3) | 121 |
C4—H4A···Cl2v | 0.99 | 2.73 | 3.653 (4) | 155 |
C7—H7A···Cl2v | 0.99 | 2.90 | 3.856 (3) | 164 |
C7—H7B···Cl2ii | 0.99 | 2.85 | 3.514 (3) | 125 |
C5—H5B···O1iii | 0.99 | 2.48 | 3.257 (4) | 135 |
C20—H20···O2vi | 0.95 | 2.47 | 3.203 (4) | 134 |
Symmetry codes: (i) −x+2, −y+1, −z+1; (ii) −x+1, −y+1, −z+1; (iii) −x+2, y+1/2, −z+1/2; (iv) x, −y+1/2, z−1/2; (v) −x+1, y+1/2, −z+1/2; (vi) x−1, y, z. |
Experimental details
Crystal data | |
Chemical formula | [Zn2(C13H22N3O4)2][ZnCl3(C5H4N)]2 |
Mr | 1201.05 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 143 |
a, b, c (Å) | 9.5416 (15), 17.491 (2), 14.098 (3) |
β (°) | 104.366 (10) |
V (Å3) | 2279.2 (7) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 2.49 |
Crystal size (mm) | 0.5 × 0.45 × 0.15 |
Data collection | |
Diffractometer | Stoe STADI-4 diffractometer |
Absorption correction | ψ scans (XEMP; Siemens, 1994) |
Tmin, Tmax | 0.670, 0.984 |
No. of measured, independent and observed [I > 2s(I)] reflections | 8250, 4031, 3390 |
Rint | 0.035 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.029, 0.069, 1.04 |
No. of reflections | 4031 |
No. of parameters | 292 |
No. of restraints | 3 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.47, −0.38 |
Computer programs: DIF4 (Stoe & Cie, 1992), DIF4, REDU4 (Stoe & Cie, 1992), SHELXS97 (Sheldrick, 1990), SHELXL97 (Sheldrick, 1997), XP (Siemens, 1994), SHELXL97.
Zn1—O4i | 1.9590 (19) | Zn2—N4 | 2.070 (2) |
Zn1—N1 | 2.082 (2) | Zn2—Cl1 | 2.2314 (9) |
Zn1—N3 | 2.083 (3) | Zn2—Cl2 | 2.2496 (9) |
Zn1—O4 | 2.0860 (19) | Zn2—Cl3 | 2.2615 (9) |
Zn1—N2 | 2.106 (3) | ||
O4i—Zn1—N1 | 133.76 (9) | C1—N3—C9 | 111.5 (2) |
O4i—Zn1—N3 | 123.80 (10) | C1—N3—Zn1 | 112.41 (18) |
N1—Zn1—N3 | 98.10 (10) | C9—N3—Zn1 | 119.17 (19) |
O4i—Zn1—O4 | 76.99 (8) | C12—O4—Zn1i | 135.25 (17) |
N1—Zn1—O4 | 86.78 (9) | C12—O4—Zn1 | 121.35 (16) |
N3—Zn1—O4 | 88.04 (9) | Zn1i—O4—Zn1 | 103.01 (8) |
O4i—Zn1—N2 | 96.93 (9) | N4—Zn2—Cl1 | 103.78 (7) |
N1—Zn1—N2 | 95.22 (10) | N4—Zn2—Cl2 | 102.62 (7) |
N3—Zn1—N2 | 98.26 (10) | Cl1—Zn2—Cl2 | 117.04 (4) |
O4—Zn1—N2 | 173.04 (9) | N4—Zn2—Cl3 | 108.25 (7) |
C3—N1—C4 | 111.2 (2) | Cl1—Zn2—Cl3 | 113.08 (4) |
C3—N1—Zn1 | 112.64 (18) | Cl2—Zn2—Cl3 | 110.89 (3) |
C4—N1—Zn1 | 112.96 (19) | C20—N4—C24 | 118.3 (3) |
C7—N2—C6 | 115.0 (3) | C20—N4—Zn2 | 119.5 (2) |
C7—N2—Zn1 | 118.0 (2) | C24—N4—Zn2 | 122.0 (2) |
C6—N2—Zn1 | 110.3 (2) |
Symmetry code: (i) −x+2, −y+1, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H01···Cl3i | 0.81 (2) | 2.66 (2) | 3.449 (3) | 165 (3) |
N2—H02···Cl2ii | 0.80 (2) | 2.72 (3) | 3.356 (3) | 138 (3) |
N3—H03···Cl3 | 0.82 (2) | 2.52 (2) | 3.325 (3) | 172 (3) |
C3—H3···Cl1iii | 1.00 | 2.70 | 3.664 (3) | 162 |
C23—H23···Cl1iv | 0.95 | 2.75 | 3.638 (3) | 156 |
C24—H24···Cl1 | 0.95 | 2.90 | 3.483 (3) | 121 |
C4—H4A···Cl2v | 0.99 | 2.73 | 3.653 (4) | 155 |
C7—H7A···Cl2v | 0.99 | 2.90 | 3.856 (3) | 164 |
C7—H7B···Cl2ii | 0.99 | 2.85 | 3.514 (3) | 125 |
C5—H5B···O1iii | 0.99 | 2.48 | 3.257 (4) | 135 |
C20—H20···O2vi | 0.95 | 2.47 | 3.203 (4) | 134 |
Symmetry codes: (i) −x+2, −y+1, −z+1; (ii) −x+1, −y+1, −z+1; (iii) −x+2, y+1/2, −z+1/2; (iv) x, −y+1/2, z−1/2; (v) −x+1, y+1/2, −z+1/2; (vi) x−1, y, z. |
The previous communication (Jones et al., 2003) described the crystal and molecular structure of a cationic zinc complex, of interest as a potential leaving group in models for certain aspects of catalysis in metalloenzymes. Crystal structures also contain a wealth of potential information about reactivity, but evidence from a single structure (which may be `basically anecdotal'; Kirby, 1994) should be regarded with caution. We report here a second structure, (2), containing the same dication (but with a different counter-ion). The structure was determined because it was thought that a different, possibly monomeric form of the zinc complex might have been formed (see Experimental). However, the structure solution (Fig. 1) revealed the same dimeric dication, again with inversion symmetry, but with the complex anion [Zn(py)Cl3]- replacing chloride as counter-ion. The formation of the dimeric complex in two different structures with distinctly different counter-ions, and in the presence of a potentially competing ligand (pyridine), suggests that the species is relatively stable and not just the `accidental' result of a compromise between packing forces in a specific structure.
The cations of both compounds are structurally similar, as would be expected; the general comments of the previous paper are thus valid for the current structure (e.g. the inversion symmetry and the trigonal-bipyramidal geometry at zinc; however, some differences are presented below). We also have good spectroscopic evidence that the structures are similar in solution (Beckmann, 1998). A least-squares fit of the asymmetric unit of both cations (Fig. 2) shows that the ZnNC3N rings differ in conformation between the two compounds; except for these three C atoms; however, the r.m.s. displacement is only 0.09 Å. Bond lengths and angles at zinc (see Table 1 for exact values and s.u.'s) differ appreciably for Zn—O4ax (here 2.09, previously 2.16 Å) and O4eq—Zn—N3 (here 124°, previously 107°).
The anion has distorted tetrahedral geometry at the central Zn atom. Three classical N—H···Cl—Zn hydrogen bonds (Table 2) are observed between anion and cation, the net effect of which is to form columns of anions and cations parallel to the x axis in the regions x,y ≈ 1/2 (Fig. 3) and x,y ≈ 0. However, these interactions are appreciably longer than the N—H···Cl- of the previous structure, and are supplemented by a series of `weak' C—H···X hydrogen bonds (X = Cl and O; Table 2) of comparable lengths.