The title dimethylhydrazide o-FC6H4C(O)NHNMe2, or C9H11FN2O, is compared structurally both with other aroyl hydrazides, ArC(O)NHNH2, and with related trimethylammonio ylides, Me3N(+)-N(-)C(O)Ar.
Supporting information
CCDC reference: 209960
Key indicators
- Single-crystal X-ray study
- T = 100 K
- Mean (C-C) = 0.002 Å
- R factor = 0.045
- wR factor = 0.116
- Data-to-parameter ratio = 14.5
checkCIF results
No syntax errors found
ADDSYM reports no extra symmetry
The title compound was prepared by the method of Smith et al. (1968).
All H atoms were initially located from difference syntheses. The H atom bonded to N1 was freely refined. Other H atoms were positioned geometrically and refined with riding constraints, assuming C—H bond lengths of 0.93 and 0.96 Å, respectively, for sp2 and sp3 C atoms. In the case of each of the two methyl groups, a single orientation parameter was also refined.
Data collection: COLLECT (Nonius, 2000); cell refinement: HKL SCALEPACK (Otwinowski & Minor, 1997); data reduction: HKL DENZO (Otwinowski & Minor 1997) and SCALEPACK; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Crystal data top
C9H11FN2O | F(000) = 768 |
Mr = 182.2 | Dx = 1.303 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 1794 reflections |
a = 11.8503 (5) Å | θ = 2.9–26.0° |
b = 7.8530 (3) Å | µ = 0.10 mm−1 |
c = 19.9630 (9) Å | T = 100 K |
V = 1857.77 (13) Å3 | Needle, colourless |
Z = 8 | 0.40 × 0.05 × 0.05 mm |
Data collection top
Nonius KappaCCD diffractometer | Rint = 0.057 |
thick–slices ω and ϕ scans | θmax = 25.9°, θmin = 3.3° |
6796 measured reflections | h = −14→14 |
1797 independent reflections | k = −9→9 |
1491 reflections with I > 2σ(I) | l = −24→24 |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
R[F2 > 2σ(F2)] = 0.045 | w = 1/[σ2(Fo2) + (0.048P)2 + 0.85P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.116 | (Δ/σ)max < 0.001 |
S = 1.11 | Δρmax = 0.23 e Å−3 |
1797 reflections | Δρmin = −0.25 e Å−3 |
124 parameters | |
Crystal data top
C9H11FN2O | V = 1857.77 (13) Å3 |
Mr = 182.2 | Z = 8 |
Orthorhombic, Pbca | Mo Kα radiation |
a = 11.8503 (5) Å | µ = 0.10 mm−1 |
b = 7.8530 (3) Å | T = 100 K |
c = 19.9630 (9) Å | 0.40 × 0.05 × 0.05 mm |
Data collection top
Nonius KappaCCD diffractometer | 1491 reflections with I > 2σ(I) |
6796 measured reflections | Rint = 0.057 |
1797 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.045 | 0 restraints |
wR(F2) = 0.116 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.11 | Δρmax = 0.23 e Å−3 |
1797 reflections | Δρmin = −0.25 e Å−3 |
124 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.04440 (14) | 0.0364 (2) | 0.31315 (8) | 0.0242 (4) | |
C2 | 0.01463 (14) | −0.0441 (2) | 0.25446 (9) | 0.0275 (4) | |
H2 | −0.056 | −0.0942 | 0.2495 | 0.033* | |
C3 | 0.09321 (15) | −0.0482 (2) | 0.20276 (8) | 0.0285 (4) | |
H3 | 0.0747 | −0.0992 | 0.1622 | 0.034* | |
C4 | 0.19926 (15) | 0.0235 (2) | 0.21152 (9) | 0.0283 (4) | |
H4 | 0.2516 | 0.0203 | 0.1768 | 0.034* | |
C5 | 0.22732 (14) | 0.0997 (2) | 0.27185 (8) | 0.0252 (4) | |
H5 | 0.2992 | 0.145 | 0.2777 | 0.03* | |
C6 | 0.14924 (13) | 0.1093 (2) | 0.32376 (8) | 0.0217 (4) | |
C7 | 0.17407 (14) | 0.2139 (2) | 0.38546 (8) | 0.0220 (4) | |
C8 | 0.25331 (19) | 0.1700 (3) | 0.53962 (9) | 0.0384 (5) | |
H8A | 0.1723 | 0.1678 | 0.5382 | 0.058* | |
H8B | 0.2776 | 0.2334 | 0.5781 | 0.058* | |
H8C | 0.2815 | 0.0556 | 0.5425 | 0.058* | |
C9 | 0.41985 (17) | 0.2554 (3) | 0.47847 (10) | 0.0395 (5) | |
H9A | 0.4488 | 0.1415 | 0.4814 | 0.059* | |
H9B | 0.4462 | 0.3206 | 0.5161 | 0.059* | |
H9C | 0.4456 | 0.3073 | 0.4377 | 0.059* | |
F1 | −0.03368 (8) | 0.04377 (14) | 0.36335 (5) | 0.0329 (3) | |
N1 | 0.26030 (13) | 0.15704 (18) | 0.42201 (7) | 0.0253 (3) | |
H1 | 0.2893 (17) | 0.051 (3) | 0.4152 (10) | 0.034 (5)* | |
N2 | 0.29666 (13) | 0.25077 (19) | 0.47890 (7) | 0.0273 (4) | |
O1 | 0.11979 (10) | 0.34444 (15) | 0.39699 (6) | 0.0279 (3) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0200 (8) | 0.0247 (8) | 0.0278 (9) | 0.0017 (7) | 0.0018 (7) | −0.0009 (7) |
C2 | 0.0199 (8) | 0.0294 (9) | 0.0332 (9) | −0.0004 (7) | −0.0047 (7) | −0.0045 (7) |
C3 | 0.0281 (9) | 0.0311 (9) | 0.0263 (9) | 0.0038 (8) | −0.0055 (7) | −0.0055 (7) |
C4 | 0.0265 (9) | 0.0326 (9) | 0.0260 (9) | 0.0013 (7) | 0.0021 (7) | 0.0004 (7) |
C5 | 0.0203 (8) | 0.0273 (9) | 0.0280 (8) | −0.0017 (7) | −0.0012 (7) | 0.0005 (7) |
C6 | 0.0208 (8) | 0.0195 (8) | 0.0248 (8) | 0.0015 (6) | −0.0028 (7) | 0.0013 (6) |
C7 | 0.0211 (8) | 0.0210 (8) | 0.0239 (8) | −0.0026 (6) | 0.0004 (6) | 0.0020 (6) |
C8 | 0.0498 (12) | 0.0378 (10) | 0.0275 (9) | −0.0050 (9) | −0.0023 (9) | −0.0040 (8) |
C9 | 0.0332 (10) | 0.0449 (11) | 0.0405 (11) | −0.0068 (9) | −0.0097 (9) | −0.0056 (9) |
F1 | 0.0235 (5) | 0.0414 (6) | 0.0338 (6) | −0.0067 (5) | 0.0068 (4) | −0.0083 (4) |
N1 | 0.0301 (8) | 0.0192 (7) | 0.0267 (7) | 0.0030 (6) | −0.0073 (6) | −0.0043 (6) |
N2 | 0.0313 (8) | 0.0252 (7) | 0.0254 (7) | 0.0001 (7) | −0.0088 (6) | −0.0043 (6) |
O1 | 0.0256 (6) | 0.0250 (6) | 0.0331 (7) | 0.0028 (5) | −0.0046 (5) | −0.0053 (5) |
Geometric parameters (Å, º) top
C1—F1 | 1.3653 (19) | C7—O1 | 1.232 (2) |
C1—C2 | 1.377 (2) | C7—N1 | 1.333 (2) |
C1—C6 | 1.384 (2) | C8—N2 | 1.462 (2) |
C2—C3 | 1.390 (3) | C8—H8A | 0.96 |
C2—H2 | 0.93 | C8—H8B | 0.96 |
C3—C4 | 1.388 (3) | C8—H8C | 0.96 |
C3—H3 | 0.93 | C9—N2 | 1.460 (2) |
C4—C5 | 1.385 (2) | C9—H9A | 0.96 |
C4—H4 | 0.93 | C9—H9B | 0.96 |
C5—C6 | 1.391 (2) | C9—H9C | 0.96 |
C5—H5 | 0.93 | N1—N2 | 1.4202 (19) |
C6—C7 | 1.509 (2) | N1—H1 | 0.91 (2) |
| | | |
F1—C1—C2 | 118.06 (15) | N1—C7—C6 | 114.46 (14) |
F1—C1—C6 | 118.58 (14) | N2—C8—H8A | 109.5 |
C2—C1—C6 | 123.36 (16) | N2—C8—H8B | 109.5 |
C1—C2—C3 | 118.07 (16) | H8A—C8—H8B | 109.5 |
C1—C2—H2 | 121 | N2—C8—H8C | 109.5 |
C3—C2—H2 | 121 | H8A—C8—H8C | 109.5 |
C4—C3—C2 | 120.23 (16) | H8B—C8—H8C | 109.5 |
C4—C3—H3 | 119.9 | N2—C9—H9A | 109.5 |
C2—C3—H3 | 119.9 | N2—C9—H9B | 109.5 |
C5—C4—C3 | 120.13 (16) | H9A—C9—H9B | 109.5 |
C5—C4—H4 | 119.9 | N2—C9—H9C | 109.5 |
C3—C4—H4 | 119.9 | H9A—C9—H9C | 109.5 |
C4—C5—C6 | 120.75 (16) | H9B—C9—H9C | 109.5 |
C4—C5—H5 | 119.6 | C7—N1—N2 | 119.79 (14) |
C6—C5—H5 | 119.6 | C7—N1—H1 | 120.9 (13) |
C1—C6—C5 | 117.42 (15) | N2—N1—H1 | 118.6 (13) |
C1—C6—C7 | 121.66 (15) | N1—N2—C9 | 108.16 (14) |
C5—C6—C7 | 120.50 (14) | N1—N2—C8 | 109.36 (14) |
O1—C7—N1 | 125.22 (15) | C9—N2—C8 | 111.54 (15) |
O1—C7—C6 | 120.24 (14) | | |
| | | |
F1—C1—C2—C3 | 178.55 (15) | C4—C5—C6—C7 | −171.20 (15) |
C6—C1—C2—C3 | −1.7 (3) | C1—C6—C7—O1 | −60.7 (2) |
C1—C2—C3—C4 | 1.6 (3) | C5—C6—C7—O1 | 111.73 (18) |
C2—C3—C4—C5 | −0.1 (3) | C1—C6—C7—N1 | 122.50 (17) |
C3—C4—C5—C6 | −1.6 (3) | C5—C6—C7—N1 | −65.1 (2) |
F1—C1—C6—C5 | 179.89 (14) | O1—C7—N1—N2 | −0.7 (3) |
C2—C1—C6—C5 | 0.1 (2) | C6—C7—N1—N2 | 175.91 (14) |
F1—C1—C6—C7 | −7.5 (2) | C7—N1—N2—C9 | −136.70 (17) |
C2—C1—C6—C7 | 172.74 (15) | C7—N1—N2—C8 | 101.65 (18) |
C4—C5—C6—C1 | 1.5 (2) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1i | 0.91 (2) | 1.98 (2) | 2.8801 (19) | 168.8 (19) |
Symmetry code: (i) −x+1/2, y−1/2, z. |
Experimental details
Crystal data |
Chemical formula | C9H11FN2O |
Mr | 182.2 |
Crystal system, space group | Orthorhombic, Pbca |
Temperature (K) | 100 |
a, b, c (Å) | 11.8503 (5), 7.8530 (3), 19.9630 (9) |
V (Å3) | 1857.77 (13) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.40 × 0.05 × 0.05 |
|
Data collection |
Diffractometer | Nonius KappaCCD diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6796, 1797, 1491 |
Rint | 0.057 |
(sin θ/λ)max (Å−1) | 0.615 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.116, 1.11 |
No. of reflections | 1797 |
No. of parameters | 124 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.23, −0.25 |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1i | 0.91 (2) | 1.98 (2) | 2.8801 (19) | 168.8 (19) |
Symmetry code: (i) −x+1/2, y−1/2, z. |
The title compound, (I), was prepared as a precurser to the corresponding trimethylammonio-stabilized nitrogen ylide Me3N(+)—N(-)—C(O)C6H4—F-o. Its structure was determined in the course of an investigation into the ability of nitrogen ylides to act as ligands with transition metals (Morris et al., 2003).
The presence of the ortho-fluoro substituent causes (I) to adopt a conformation (Fig. 1) which precludes conjugation across the C6—C7 bond [C1—C6—C7—N1 = 122.5 (2)°]. Possibly as a result, the C6—C7 bond [1.509 (2) Å] is 0.02 Å longer than the database average value obtained by Orpen et al. (1992) for such bonds, whereas all other bond lengths in (I) agree within 0.008 Å with appropriate average values from the Cambridge Structural Database (Allen, 2002). Phenylhydrazides, in general, adopt much flatter conformations than that found in (I). For example, in PhC(O)NHNH2, (II), the C(Ph)—C(Ph)—C(O)—N torsion angle is 30° (Kallel et al., 1992), while in o-HOC6H4C(O)NHNH2, (III), the corresponding angle is only 3° (Mikenda et al., 1993). In (I), the C6—C7—N1—N2 torsion angle is 175.9 (1)°. Corresponding values in other hydrazides are almost invariably close to 180°; the only exception we are aware of is provided by Ph(CO)NMeNMe2, where this torsion angle is only 8.5° (Knapp et al., 1981), presumably for steric reasons. In (I), the N—N distance [1.420 (2) Å] and C—N—N angle [119.8 (1)°] are typical of hydrazides, such as (II) and (III), whereas in the closely related Me3N(+)—N(-)C(O)Ar ylides, the N—N distances are longer and the C—N—N angles more acute, e.g. 1.470 (3) Å and 114.2 (3)° when Ar = Ph (Cameron et al., 1972), and 1.474 (1) Å and 174.8 (1)° when Ar = p-Cl–C6H4 (Morris et al., 2003). QUEST and CONQUEST search programs were used with Version 5.24 of the Cambridge Structural Database (Allen, 2002) to obtain some torsion angles not given by the original authors.
Glide-plane-related molecules connected by N—H···O hydrogen bonds (Fig. 2) form stacks which run parallel to the b axis. These stacks pack so that alternate layers parallel to (001) contain, respectively, aromatic rings and terminal NMe2 groups, as can be seen by viewing the contents of the unit cell in projection down the a axis (Fig. 3). As expected (Glusker et al., 1994), the F atoms do not participate in the hydrogen bonding.
The atomic Uij values are moderately well reproduced by a TLS analysis (Schomacher & Trueblood, 1968): R2 = (ΣΔU2/ΣU2)1/2 = 0.10; they also pass the Hirshfeld (1976) rigid-bond test, the worst discrepancy being ΔU = 0.0018 (12) Å2 for C4—C5.