Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536803006524/om6137sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536803006524/om61375sup2.hkl |
CCDC reference: 209983
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.005 Å
- R factor = 0.046
- wR factor = 0.112
- Data-to-parameter ratio = 6.6
checkCIF results
No syntax errors found ADDSYM reports no extra symmetry General Notes
REFLT_03 From the CIF: _diffrn_reflns_theta_max 25.98 From the CIF: _reflns_number_total 485 Count of symmetry unique reflns 487 Completeness (_total/calc) 99.59% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 0 Fraction of Friedel pairs measured 0.000 Are heavy atom types Z>Si present no Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF.
Recently, we have succeeded in the preparation of 3,5-dibromonortricyclane by the selective bromination of norbornadiene (Tutar et al., 1996). After completion of the reaction shown in the Scheme above, the reaction mixture was subjected to silica-gel chromatography by eluting with hexane–ethyl acetate. Five fractions were obtained, including compound (5) in a yield of 11%. This was dissolved in boiling acetone and n-hexane was added. The clear solution was cooled slowly to room temperature. After about one day, colourless prism-shaped crystals had formed.
All H atoms were placed in geometrically idealized positions and constrained to ride on their parent atoms.
Data collection: SMART (Siemens, 1996); cell refinement: SAINT (Siemens,1996); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
C7H7N2O6 | F(000) = 444 |
Mr = 215.15 | Dx = 1.602 Mg m−3 |
Orthorhombic, Cmc21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: C 2c -2 | Cell parameters from 2626 reflections |
a = 13.4146 (9) Å | θ = 3–26° |
b = 6.6414 (5) Å | µ = 0.14 mm−1 |
c = 10.0118 (6) Å | T = 293 K |
V = 891.97 (10) Å3 | Prism, colorless |
Z = 4 | 0.32 × 0.22 × 0.12 mm |
Siemens SMART CCD area-detector diffractometer | 423 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.072 |
Graphite monochromator | θmax = 26.0°, θmin = 3.0° |
Detector resolution: 8.33 pixels mm-1 | h = −12→16 |
ω scans | k = −8→7 |
2626 measured reflections | l = −12→11 |
485 independent reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.046 | H-atom parameters constrained |
wR(F2) = 0.112 | w = 1/[σ2(Fo2) + (0.0641P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.13 | (Δ/σ)max < 0.001 |
485 reflections | Δρmax = 0.22 e Å−3 |
74 parameters | Δρmin = −0.26 e Å−3 |
1 restraint | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.023 (5) |
C7H7N2O6 | V = 891.97 (10) Å3 |
Mr = 215.15 | Z = 4 |
Orthorhombic, Cmc21 | Mo Kα radiation |
a = 13.4146 (9) Å | µ = 0.14 mm−1 |
b = 6.6414 (5) Å | T = 293 K |
c = 10.0118 (6) Å | 0.32 × 0.22 × 0.12 mm |
Siemens SMART CCD area-detector diffractometer | 423 reflections with I > 2σ(I) |
2626 measured reflections | Rint = 0.072 |
485 independent reflections |
R[F2 > 2σ(F2)] = 0.046 | 1 restraint |
wR(F2) = 0.112 | H-atom parameters constrained |
S = 1.13 | Δρmax = 0.22 e Å−3 |
485 reflections | Δρmin = −0.26 e Å−3 |
74 parameters |
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All e.s.d.'s are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
O1 | 0.09919 (13) | 0.3326 (3) | −0.1242 (2) | 0.0395 (8) | |
O2 | 0.1928 (2) | 0.3300 (5) | −0.2994 (3) | 0.0630 (10) | |
O3 | 0.2510 (2) | 0.1972 (4) | −0.1175 (4) | 0.0640 (11) | |
N1 | 0.1888 (2) | 0.2810 (4) | −0.1851 (3) | 0.0428 (10) | |
C1 | 0.0892 (2) | 0.2661 (4) | 0.0132 (3) | 0.0344 (10) | |
C2 | 0.0559 (2) | 0.0535 (5) | 0.0289 (4) | 0.0392 (11) | |
C3 | 0.00000 | 0.0464 (8) | 0.1590 (5) | 0.0443 (16) | |
C4 | 0.00000 | 0.2629 (7) | 0.2134 (6) | 0.0460 (17) | |
C5 | 0.00000 | 0.3707 (7) | 0.0772 (5) | 0.0363 (14) | |
H1A | 0.14888 | 0.29156 | 0.06311 | 0.0413* | |
H2A | 0.09476 | −0.05742 | −0.00351 | 0.0470* | |
H3A | 0.00000 | −0.06945 | 0.21613 | 0.0533* | |
H4A | 0.05854 | 0.29235 | 0.26473 | 0.0552* | 0.500 |
H5A | 0.00000 | 0.51504 | 0.07740 | 0.0436* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0189 (10) | 0.0524 (15) | 0.0472 (14) | 0.0014 (8) | 0.0059 (10) | 0.0045 (11) |
O2 | 0.0544 (16) | 0.084 (2) | 0.0507 (17) | 0.0037 (14) | 0.0209 (13) | 0.0039 (16) |
O3 | 0.0330 (14) | 0.079 (2) | 0.080 (2) | 0.0200 (13) | 0.0061 (15) | 0.006 (2) |
N1 | 0.0275 (14) | 0.0430 (17) | 0.058 (2) | 0.0007 (11) | 0.0117 (13) | −0.0039 (14) |
C1 | 0.0207 (14) | 0.0418 (18) | 0.0407 (19) | 0.0025 (12) | −0.0038 (13) | −0.0010 (14) |
C2 | 0.0354 (18) | 0.0394 (18) | 0.0427 (19) | 0.0083 (13) | 0.0002 (15) | 0.0001 (14) |
C3 | 0.038 (2) | 0.055 (3) | 0.040 (3) | 0.0000 | 0.0000 | 0.011 (2) |
C4 | 0.041 (3) | 0.054 (3) | 0.043 (3) | 0.0000 | 0.0000 | −0.008 (2) |
C5 | 0.030 (2) | 0.035 (2) | 0.044 (3) | 0.0000 | 0.0000 | −0.0044 (18) |
O1—N1 | 1.391 (3) | C3—C4 | 1.538 (7) |
O1—C1 | 1.451 (4) | C4—C5 | 1.540 (8) |
O2—N1 | 1.191 (4) | C1—H1A | 0.9588 |
O3—N1 | 1.210 (4) | C2—H2A | 0.9590 |
C1—C2 | 1.489 (4) | C3—H3A | 0.9587 |
C1—C5 | 1.525 (4) | C4—H4A | 0.9587 |
C2—C3 | 1.504 (6) | C5—H5A | 0.9586 |
C2—C2i | 1.500 (4) | ||
O1···C4ii | 3.410 (5) | O3···H2Aiv | 2.8704 |
O1···O1i | 2.661 (2) | N1···O3iv | 2.958 (4) |
O1···C4iii | 3.410 (5) | C2···O3 | 3.148 (4) |
O1···O3iv | 3.147 (3) | C4···O1ix | 3.410 (5) |
O2···O3iv | 3.136 (5) | C4···O1x | 3.410 (5) |
O3···N1v | 2.958 (4) | H1A···O3 | 2.3535 |
O3···O1v | 3.147 (3) | H1A···H4A | 2.3544 |
O3···O2v | 3.136 (5) | H1A···O2xi | 2.6565 |
O3···C2 | 3.148 (4) | H2A···O3v | 2.8704 |
O1···H3Avi | 2.7167 | H3A···O1xii | 2.7167 |
O1···H3Avii | 2.7167 | H3A···O1xiii | 2.7167 |
O1···H4Aiii | 2.7818 | H4A···H1A | 2.3544 |
O2···H1Aviii | 2.6565 | H4A···O1x | 2.7818 |
O3···H1A | 2.3535 | H4A···O3xi | 2.8147 |
O3···H4Aviii | 2.8147 | ||
N1—O1—C1 | 114.9 (2) | O1—C1—H1A | 111.30 |
O1—N1—O2 | 113.1 (3) | C2—C1—H1A | 111.26 |
O1—N1—O3 | 117.7 (3) | C5—C1—H1A | 110.85 |
O2—N1—O3 | 129.2 (3) | C1—C2—H2A | 121.97 |
O1—C1—C2 | 114.6 (3) | C3—C2—H2A | 122.69 |
O1—C1—C5 | 109.4 (3) | C2i—C2—H2A | 122.93 |
C2—C1—C5 | 98.8 (3) | C2—C3—H3A | 122.82 |
C1—C2—C3 | 105.7 (3) | C4—C3—H3A | 122.63 |
C1—C2—C2i | 107.5 (3) | C2i—C3—H3A | 122.82 |
C2i—C2—C3 | 60.1 (2) | C3—C4—H4A | 112.38 |
C2—C3—C4 | 106.1 (4) | C3—C4—H4Ai | 112.38 |
C2—C3—C2i | 59.8 (3) | C5—C4—H4A | 112.32 |
C2i—C3—C4 | 106.1 (4) | C5—C4—H4Ai | 112.32 |
C3—C4—C5 | 97.0 (4) | H4A—C4—H4Ai | 110.00 |
C1—C5—C4 | 99.2 (3) | C1—C5—H5A | 117.16 |
C1—C5—C1i | 103.4 (3) | C4—C5—H5A | 117.58 |
C1i—C5—C4 | 99.2 (3) | C1i—C5—H5A | 117.16 |
C1—O1—N1—O2 | 176.9 (3) | C2—C1—C5—C1i | −46.8 (3) |
C1—O1—N1—O3 | −3.9 (4) | O1—C1—C2—C3 | −150.8 (2) |
N1—O1—C1—C2 | −82.8 (3) | C1—C2—C3—C2i | 101.4 (3) |
N1—O1—C1—C5 | 167.4 (2) | C2i—C2—C3—C4 | −99.6 (3) |
O1—C1—C2—C2i | −87.9 (3) | C1—C2—C2i—C3 | −98.4 (4) |
C5—C1—C2—C3 | −34.7 (3) | C1—C2—C2i—C1i | 0.0 (4) |
C5—C1—C2—C2i | 28.3 (4) | C1—C2—C3—C4 | 1.8 (3) |
O1—C1—C5—C4 | 175.1 (2) | C2—C3—C4—C5 | 31.27 (18) |
O1—C1—C5—C1i | 73.3 (3) | C3—C4—C5—C1 | −52.7 (2) |
C2—C1—C5—C4 | 55.1 (3) |
Symmetry codes: (i) −x, y, z; (ii) −x, −y+1, z−1/2; (iii) x, −y+1, z−1/2; (iv) −x+1/2, y+1/2, z; (v) −x+1/2, y−1/2, z; (vi) −x, −y, z−1/2; (vii) x, −y, z−1/2; (viii) −x+1/2, −y+1/2, z−1/2; (ix) −x, −y+1, z+1/2; (x) x, −y+1, z+1/2; (xi) −x+1/2, −y+1/2, z+1/2; (xii) −x, −y, z+1/2; (xiii) x, −y, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C7H7N2O6 |
Mr | 215.15 |
Crystal system, space group | Orthorhombic, Cmc21 |
Temperature (K) | 293 |
a, b, c (Å) | 13.4146 (9), 6.6414 (5), 10.0118 (6) |
V (Å3) | 891.97 (10) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.14 |
Crystal size (mm) | 0.32 × 0.22 × 0.12 |
Data collection | |
Diffractometer | Siemens SMART CCD area-detector diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 2626, 485, 423 |
Rint | 0.072 |
(sin θ/λ)max (Å−1) | 0.616 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.046, 0.112, 1.13 |
No. of reflections | 485 |
No. of parameters | 74 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.22, −0.26 |
Computer programs: SMART (Siemens, 1996), SAINT (Siemens,1996), SAINT, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
O1—N1 | 1.391 (3) | C1—C5 | 1.525 (4) |
O1—C1 | 1.451 (4) | C2—C3 | 1.504 (6) |
O2—N1 | 1.191 (4) | C3—C4 | 1.538 (7) |
O3—N1 | 1.210 (4) | C4—C5 | 1.540 (8) |
C1—C2 | 1.489 (4) | ||
N1—O1—C1 | 114.9 (2) | C2—C1—C5 | 98.8 (3) |
O1—N1—O2 | 113.1 (3) | C1—C2—C3 | 105.7 (3) |
O1—N1—O3 | 117.7 (3) | C2—C3—C4 | 106.1 (4) |
O2—N1—O3 | 129.2 (3) | C3—C4—C5 | 97.0 (4) |
O1—C1—C2 | 114.6 (3) | C1—C5—C4 | 99.2 (3) |
O1—C1—C5 | 109.4 (3) | ||
C1—O1—N1—O2 | 176.9 (3) | C2—C1—C5—C4 | 55.1 (3) |
C1—O1—N1—O3 | −3.9 (4) | O1—C1—C2—C3 | −150.8 (2) |
N1—O1—C1—C2 | −82.8 (3) | C1—C2—C3—C4 | 1.8 (3) |
N1—O1—C1—C5 | 167.4 (2) | C2—C3—C4—C5 | 31.27 (18) |
C5—C1—C2—C3 | −34.7 (3) | C3—C4—C5—C1 | −52.7 (2) |
O1—C1—C5—C4 | 175.1 (2) |
A convenient synthetic method for 3,5-disubstituted nortricyclane derivatives is not available in the literature. Most literature syntheses of 3,5-disubstituted nortricyclanes rely on the electrophilic addition of norbornadiene, which give complex reaction mixtures in which normal addition and Wagner–Meerwein rearrangement stereoisomeric product mixtures are formed (Zefirov et al., 1982).
3,5-Dibromonortricyclanes (2) and (3) (see reaction Scheme) constitute valuable precursors for the preparation of functionalized 3,5-disubstituted norbornadienes. We wish to demonstrate the synthetic potential of cyclopropyl bromides in nortricyclane structures for substitution reactions. Silver-induced nucleophilic substitution reactions of (2) and (3) may be prime tools for difficult to access 3,5-dibromonortricyclane derivatives. For this reason, a dibromonortricyclane mixture [(2) and (3)] in dry acetone was treated with two equivalents of AgClO4 in dry acetone. After reaction, a 3,5-dinitroxynortricylane product, (5), was obtained in 11% yield as a minor isomer. NMR spectra indicate symmetry in the structure. Two symmetrical structures are possible for the dinitroxy structure. Therefore, it was not possible to establish the exact configuration of the nitroxy groups from NMR investigations. The crystal structure determination established the conformation of (5) to be endo,endo, (I).
It is interesting that both substituents in the structure are in the endo direction, in which we expect a strong dipole–dipole and van der Waals interactions as a consequence of the cis orientation of nitroxy groups. As far as we know no similar example of endo,endo substituents of nortricycane is available in the literature (Chizhov et al., 1987).
The values of the bond distances and angles agree with the literature values (Allen et al., 1987). The five-membered ring (C1–C5) adopts a distorted envelope conformations. The torsion angle C1—C2—C3—C4 is 1.8 (3)°. The nitroxy group is in a planar configuration and the N1—O1 distance [1.391 (3) Å] is in agreement with electron delocalization of the nitro group.