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Acta Cryst. (2004). E60, m1-m5 [ doi:10.1107/S1600536803024310 ]
A novel supramolecular organic-inorganic adduct containing
-Keggin-type [PW12O40]3- anions and benzo-15-crown-5 molecules
F. A. Almeida Paz, F. L. Sousa, P. C. R. Soares-Santos, A. M. V. Cavaleiro, H. I. S. Nogueira, J. Klinowski and T. Trindade
Online 6 December 2003
Key indicators
- Single-crystal X-ray study
- T = 180 K
- Mean
(C-C) = 0.018 Å
- H-atom completeness 92%
- R factor = 0.039
- wR factor = 0.083
- Data-to-parameter ratio = 14.1
checkCIF/PLATON results
No syntax errors found
Alert level A
PLAT029_ALERT_3_A _diffrn_measured_fraction_theta_full Low ....... 0.96
PLAT201_ALERT_2_A Isotropic non-H Atoms in Main Residue(s) ..... = 19
| Author Response: When treated anisotropically, several C-atoms showed large
tensors in more than one direction suggesting that they are affected
by thermal disorder. Consequently, these atoms have been modelled
with independent isotropic displacement parameters.
|
PLAT241_ALERT_2_A Check High U(eq) as Compared to Neighbors .... C52
| Author Response: This is a direct consequence of the thermal disorder
registered for some atoms belonging to the several organic molecules
present in the crystal structure.
|
PLAT306_ALERT_2_A Isolated Oxygen Atom (H-atoms Missing ?) ....... O1W
| Author Response: H-atoms bound to the oxygen atoms of the crystallisation
water molecules could not be located from difference Fourier maps.
Since the number of possible hydrogen bonds in which these molecules
could be involved is quite large, no attempt was made to place the
H-atoms at calculated positions. See also Experimental Section.
|
PLAT306_ALERT_2_A Isolated Oxygen Atom (H-atoms Missing ?) ....... O2W
| Author Response: H-atoms bound to the oxygen atoms of the crystallisation
water molecules could not be located from difference Fourier maps.
Since the number of possible hydrogen bonds in which these molecules
could be involved is quite large, no attempt was made to place the
H-atoms at calculated positions. See also Experimental Section.
|
PLAT306_ALERT_2_A Isolated Oxygen Atom (H-atoms Missing ?) ....... O3W
| Author Response: H-atoms bound to the oxygen atoms of the crystallisation
water molecules could not be located from difference Fourier maps.
Since the number of possible hydrogen bonds in which these molecules
could be involved is quite large, no attempt was made to place the
H-atoms at calculated positions. See also Experimental Section.
|
PLAT306_ALERT_2_A Isolated Oxygen Atom (H-atoms Missing ?) ....... O4W
| Author Response: H-atoms bound to the oxygen atoms of the crystallisation
water molecules could not be located from difference Fourier maps.
Since the number of possible hydrogen bonds in which these molecules
could be involved is quite large, no attempt was made to place the
H-atoms at calculated positions. See also Experimental Section.
|
Alert level B
PLAT242_ALERT_2_B Check Low U(eq) as Compared to Neighbors .... O59
PLAT430_ALERT_2_B Short Inter D...A Contact O2W .. O69 = 2.78 Ang.
| Author Response: H-atoms from the crystallisation water molecules are
missing (see Experimental Section). Thus, hydrogen bonds occur
between the involved O-atoms referred to in the Alerts.
|
PLAT430_ALERT_2_B Short Inter D...A Contact O2W .. O65 = 2.79 Ang.
| Author Response: H-atoms from the crystallisation water molecules are
missing (see Experimental Section). Thus, hydrogen bonds occur
between the involved O-atoms referred to in the Alerts.
|
PLAT430_ALERT_2_B Short Inter D...A Contact O2W .. O64 = 2.80 Ang.
| Author Response: H-atoms from the crystallisation water molecules are
missing (see Experimental Section). Thus, hydrogen bonds occur
between the involved O-atoms referred to in the Alerts.
|
Alert level C
PLAT041_ALERT_1_C Calc. and Rep. SumFormula Strings Differ .... ?
PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ?
PLAT068_ALERT_1_C Reported F000 Differs from Calcd (or Missing)... ?
PLAT202_ALERT_3_C Isotropic non-H Atoms in Anion/Solvent ....... = 3
PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.32 Ratio
PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.19 Ratio
PLAT230_ALERT_2_C Hirshfeld Test Diff for O47 - C20 = 5.14 su
PLAT241_ALERT_2_C Check High U(eq) as Compared to Neighbors .... C13
| Author Response: This is a direct consequence of the thermal disorder
registered for some atoms belonging to the several organic molecules
present in the crystal structure.
|
PLAT241_ALERT_2_C Check High U(eq) as Compared to Neighbors .... O55
| Author Response: This is a direct consequence of the thermal disorder
registered for some atoms belonging to the several organic molecules
present in the crystal structure.
|
PLAT241_ALERT_2_C Check High U(eq) as Compared to Neighbors .... C39
| Author Response: This is a direct consequence of the thermal disorder
registered for some atoms belonging to the several organic molecules
present in the crystal structure.
|
PLAT241_ALERT_2_C Check High U(eq) as Compared to Neighbors .... O67
| Author Response: This is a direct consequence of the thermal disorder
registered for some atoms belonging to the several organic molecules
present in the crystal structure.
|
PLAT241_ALERT_2_C Check High U(eq) as Compared to Neighbors .... C78
| Author Response: This is a direct consequence of the thermal disorder
registered for some atoms belonging to the several organic molecules
present in the crystal structure.
|
PLAT242_ALERT_2_C Check Low U(eq) as Compared to Neighbors .... C40
PLAT242_ALERT_2_C Check Low U(eq) as Compared to Neighbors .... O68
PLAT242_ALERT_2_C Check Low U(eq) as Compared to Neighbors .... C77
PLAT342_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 18
PLAT410_ALERT_2_C Short Intra H...H Contact H2 .. H14A = 1.98 Ang.
PLAT430_ALERT_2_C Short Inter D...A Contact O1W .. O44 = 2.88 Ang.
| Author Response: H-atoms from the crystallisation water molecules are
missing (see Experimental Section). Thus, hydrogen bonds occur
between the involved O-atoms referred to in the Alerts.
|
PLAT430_ALERT_2_C Short Inter D...A Contact O1W .. O49 = 2.88 Ang.
| Author Response: H-atoms from the crystallisation water molecules are
missing (see Experimental Section). Thus, hydrogen bonds occur
between the involved O-atoms referred to in the Alerts.
|
PLAT430_ALERT_2_C Short Inter D...A Contact O2W .. O67 = 2.88 Ang.
| Author Response: H-atoms from the crystallisation water molecules are
missing (see Experimental Section). Thus, hydrogen bonds occur
between the involved O-atoms referred to in the Alerts.
|
PLAT430_ALERT_2_C Short Inter D...A Contact O3W .. O51 = 2.87 Ang.
| Author Response: H-atoms from the crystallisation water molecules are
missing (see Experimental Section). Thus, hydrogen bonds occur
between the involved O-atoms referred to in the Alerts.
|
PLAT430_ALERT_2_C Short Inter D...A Contact O3W .. O58 = 2.88 Ang.
| Author Response: H-atoms from the crystallisation water molecules are
missing (see Experimental Section). Thus, hydrogen bonds occur
between the involved O-atoms referred to in the Alerts.
|
PLAT430_ALERT_2_C Short Inter D...A Contact O3W .. O59 = 2.89 Ang.
| Author Response: H-atoms from the crystallisation water molecules are
missing (see Experimental Section). Thus, hydrogen bonds occur
between the involved O-atoms referred to in the Alerts.
|
Alert level G
FORMU01_ALERT_2_G There is a discrepancy between the atom counts in the
_chemical_formula_sum and the formula from the _atom_site* data.
Atom count from _chemical_formula_sum:C85 H135 O75 P1 W12
Atom count from the _atom_site data: C85 H124 O75 P1 W12
CELLZ01_ALERT_1_G Difference between formula and atom_site contents detected.
CELLZ01_ALERT_1_G WARNING: H atoms missing from atom site list. Is this intentional?
From the CIF: _cell_formula_units_Z 4
From the CIF: _chemical_formula_sum C85 H135 O75 P W12
TEST: Compare cell contents of formula and atom_site data
atom Z*formula cif sites diff
C 340.00 340.00 0.00
H 540.00 496.00 44.00
O 300.00 300.00 0.00
P 4.00 4.00 0.00
W 48.00 48.00 0.00
7 ALERT level A = In general: serious problem
4 ALERT level B = Potentially serious problem
23 ALERT level C = Check and explain
3 ALERT level G = General alerts; check
5 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
29 ALERT type 2 Indicator that the structure model may be wrong or deficient
3 ALERT type 3 Indicator that the structure quality may be low
0 ALERT type 4 Improvement, methodology, query or suggestion
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