organic compounds
In the crystal structure of the title 1:1 co-crystal, C7H8NO3+·Cl-·C7H7NO3, of 1-carboxymethyl-3-hydroxypyridinium chloride with 3-hydroxypyridinium-1-acetate, the cation interacts with the zwitterion to form a ribbon that runs along the c axis of the orthorhombic unit cell. The Cl- anions lie at the sides of the ribbon.
Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536804018938/ci6421sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536804018938/ci6421Isup2.hkl |
CCDC reference: 251709
Key indicators
- Single-crystal X-ray study
- T = 295 K
- Mean (C-C) = 0.003 Å
- R factor = 0.033
- wR factor = 0.090
- Data-to-parameter ratio = 15.8
checkCIF/PLATON results
No syntax errors found
Alert level C ABSTM02_ALERT_3_C The ratio of expected to reported Tmax/Tmin(RR') is < 0.90 Tmin and Tmax reported: 0.709 0.930 Tmin' and Tmax expected: 0.885 0.929 RR' = 0.800 Please check that your absorption correction is appropriate. PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ? PLAT061_ALERT_3_C Tmax/Tmin Range Test RR' too Large ............. 0.80 PLAT731_ALERT_1_C Bond Calc 0.86(3), Rep 0.860(10) ...... 3.00 su-Rat O5 -H5O 1.555 1.555 PLAT735_ALERT_1_C D-H Calc 0.86(3), Rep 0.860(10) ...... 3.00 su-Rat O5 -H5O 1.555 1.555 PLAT736_ALERT_1_C H...A Calc 1.68(3), Rep 1.680(10) ...... 3.00 su-Rat H5O -O2 1.555 1.555 PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 2 C7 H7 N O3 PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 3 Cl
Alert level G REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 27.47 From the CIF: _reflns_number_total 3484 Count of symmetry unique reflns 1856 Completeness (_total/calc) 187.72% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 1628 Fraction of Friedel pairs measured 0.877 Are heavy atom types Z>Si present yes
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 8 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 4 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 3 ALERT type 4 Improvement, methodology, query or suggestion
Computing details top
Data collection: RAPID AUTO (Rigaku, 1998); cell refinement: RAPID AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEPII (Johnson, 1976) and POV-RAY (Cason, 2002); software used to prepare material for publication: SHELXL97.
1-Carboxymethyl-3-hydroxypyridinium chloride–3-hydroxypyridinium-1-acetate
(1/1) top
Crystal data top
C7H8NO3+·Cl−·C7H7NO3 | F(000) = 712 |
Mr = 342.73 | Dx = 1.496 Mg m−3 |
Orthorhombic, Pca21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2c -2ac | Cell parameters from 13151 reflections |
a = 30.983 (6) Å | θ = 3.3–27.4° |
b = 4.920 (1) Å | µ = 0.29 mm−1 |
c = 9.981 (2) Å | T = 295 K |
V = 1521.4 (5) Å3 | Prism, colourless |
Z = 4 | 0.42 × 0.35 × 0.26 mm |
Data collection top
Rigaku R-AXIS RAPID diffractometer | 3484 independent reflections |
Radiation source: fine-focus sealed tube | 3315 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.027 |
Detector resolution: 0 pixels mm-1 | θmax = 27.5°, θmin = 3.3° |
ω scans | h = −39→40 |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | k = −6→6 |
Tmin = 0.709, Tmax = 0.930 | l = −12→12 |
13459 measured reflections |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.033 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.090 | w = 1/[σ2(Fo2) + (0.0626P)2 + 0.1351P] where P = (Fo2 + 2Fc2)/3 |
S = 1.01 | (Δ/σ)max = 0.001 |
3484 reflections | Δρmax = 0.23 e Å−3 |
220 parameters | Δρmin = −0.15 e Å−3 |
4 restraints | Absolute structure: Flack (1983), with 1637 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.01 (5) |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.37226 (1) | −0.1836 (1) | 0.50000 (5) | 0.0564 (1) | |
O1 | 0.65944 (4) | −0.1561 (3) | 0.6356 (2) | 0.0565 (3) | |
O2 | 0.59993 (4) | 0.0894 (2) | 0.5948 (1) | 0.0506 (3) | |
O3 | 0.45677 (5) | −0.4617 (4) | 0.5463 (2) | 0.0654 (4) | |
O4 | 0.59179 (4) | 0.5976 (3) | 0.3821 (2) | 0.0598 (3) | |
O5 | 0.64613 (4) | 0.3093 (2) | 0.4177 (2) | 0.0528 (3) | |
O6 | 0.76769 (4) | 0.0890 (3) | 0.1124 (1) | 0.0604 (4) | |
N1 | 0.54828 (4) | −0.2479 (3) | 0.7357 (1) | 0.0375 (3) | |
N2 | 0.70282 (4) | 0.5893 (3) | 0.2725 (1) | 0.0409 (3) | |
C1 | 0.62013 (5) | −0.1028 (3) | 0.6480 (2) | 0.0389 (3) | |
C2 | 0.59529 (5) | −0.2992 (3) | 0.7372 (2) | 0.0424 (3) | |
C3 | 0.53216 (6) | −0.0579 (4) | 0.8176 (2) | 0.0487 (4) | |
C4 | 0.48880 (6) | 0.0068 (4) | 0.8115 (2) | 0.0526 (4) | |
C5 | 0.46225 (5) | −0.1268 (4) | 0.7217 (2) | 0.0475 (4) | |
C6 | 0.47959 (5) | −0.3220 (3) | 0.6370 (2) | 0.0433 (3) | |
C7 | 0.52351 (5) | −0.3802 (3) | 0.6468 (2) | 0.0412 (3) | |
C8 | 0.62813 (5) | 0.5205 (3) | 0.3636 (2) | 0.0416 (3) | |
C9 | 0.65731 (6) | 0.6774 (3) | 0.2688 (2) | 0.0491 (4) | |
C10 | 0.73044 (7) | 0.7059 (4) | 0.3593 (2) | 0.0535 (4) | |
C11 | 0.77237 (7) | 0.6171 (4) | 0.3666 (2) | 0.0586 (5) | |
C12 | 0.78655 (5) | 0.4083 (4) | 0.2867 (2) | 0.0487 (4) | |
C13 | 0.75780 (5) | 0.2910 (3) | 0.1965 (2) | 0.0419 (3) | |
C14 | 0.71562 (5) | 0.3856 (3) | 0.1922 (2) | 0.0390 (3) | |
H3O | 0.4317 (5) | −0.393 (5) | 0.540 (3) | 0.09 (1)* | |
H5O | 0.6269 (8) | 0.250 (7) | 0.472 (3) | 0.10 (1)* | |
H6O | 0.7932 (5) | 0.025 (5) | 0.127 (3) | 0.08 (1)* | |
H2A | 0.6007 | −0.4837 | 0.7072 | 0.051* | |
H2B | 0.6058 | −0.2833 | 0.8283 | 0.051* | |
H3 | 0.5501 | 0.0302 | 0.8784 | 0.058* | |
H4 | 0.4775 | 0.1399 | 0.8676 | 0.063* | |
H5 | 0.4330 | −0.0861 | 0.7181 | 0.057* | |
H7 | 0.5357 | −0.5115 | 0.5915 | 0.049* | |
H9A | 0.6465 | 0.6567 | 0.1782 | 0.059* | |
H9B | 0.6559 | 0.8689 | 0.2914 | 0.059* | |
H10 | 0.7211 | 0.8466 | 0.4143 | 0.064* | |
H11 | 0.7914 | 0.6992 | 0.4263 | 0.070* | |
H12 | 0.8148 | 0.3463 | 0.2927 | 0.058* | |
H14 | 0.6960 | 0.3071 | 0.1332 | 0.047* |
Atomic displacement parameters (Å2) top
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0368 (2) | 0.0825 (3) | 0.0498 (2) | −0.0086 (2) | 0.0004 (2) | 0.0007 (2) |
O1 | 0.0308 (5) | 0.0594 (7) | 0.0794 (9) | −0.0044 (5) | 0.0013 (6) | 0.0030 (7) |
O2 | 0.0477 (6) | 0.0413 (5) | 0.0626 (7) | 0.0039 (5) | 0.0145 (6) | 0.0119 (5) |
O3 | 0.0456 (7) | 0.0756 (9) | 0.0750 (9) | −0.0008 (7) | −0.0116 (6) | −0.0244 (7) |
O4 | 0.0416 (6) | 0.0647 (7) | 0.0731 (8) | 0.0133 (6) | 0.0067 (6) | 0.0035 (7) |
O5 | 0.0488 (7) | 0.0457 (6) | 0.0638 (8) | 0.0078 (5) | 0.0174 (6) | 0.0113 (5) |
O6 | 0.0418 (6) | 0.0759 (8) | 0.0635 (8) | 0.0194 (6) | −0.0081 (6) | −0.0246 (7) |
N1 | 0.0318 (6) | 0.0378 (5) | 0.0429 (6) | −0.0016 (5) | 0.0016 (5) | 0.0061 (5) |
N2 | 0.0454 (7) | 0.0379 (6) | 0.0393 (6) | −0.0008 (5) | 0.0071 (5) | 0.0011 (5) |
C1 | 0.0331 (6) | 0.0373 (7) | 0.0464 (7) | −0.0032 (5) | 0.0018 (6) | −0.0038 (6) |
C2 | 0.0328 (7) | 0.0393 (7) | 0.0552 (9) | 0.0021 (5) | −0.0014 (6) | 0.0079 (6) |
C3 | 0.0451 (8) | 0.0501 (8) | 0.0509 (8) | −0.0001 (7) | −0.0040 (7) | −0.0088 (7) |
C4 | 0.0452 (8) | 0.0574 (9) | 0.0551 (10) | 0.0075 (8) | 0.0026 (7) | −0.0135 (8) |
C5 | 0.0333 (7) | 0.0582 (9) | 0.0508 (9) | 0.0047 (7) | 0.0020 (6) | −0.0011 (7) |
C6 | 0.0384 (7) | 0.0467 (7) | 0.0448 (8) | −0.0037 (6) | −0.0012 (6) | −0.0001 (6) |
C7 | 0.0389 (7) | 0.0403 (7) | 0.0445 (7) | −0.0002 (6) | 0.0024 (6) | −0.0013 (6) |
C8 | 0.0409 (7) | 0.0398 (7) | 0.0442 (7) | 0.0051 (6) | 0.0035 (6) | −0.0058 (6) |
C9 | 0.0527 (9) | 0.0412 (7) | 0.0534 (9) | 0.0126 (7) | 0.0114 (8) | 0.0063 (7) |
C10 | 0.070 (1) | 0.0495 (8) | 0.0410 (8) | −0.0113 (8) | 0.0065 (8) | −0.0089 (7) |
C11 | 0.066 (1) | 0.066 (1) | 0.0436 (9) | −0.024 (1) | −0.0093 (8) | −0.0041 (8) |
C12 | 0.0373 (8) | 0.065 (1) | 0.0442 (8) | −0.0069 (7) | −0.0051 (6) | 0.0065 (8) |
C13 | 0.0375 (8) | 0.0498 (8) | 0.0383 (7) | 0.0011 (6) | 0.0001 (6) | −0.0009 (6) |
C14 | 0.0366 (7) | 0.0424 (7) | 0.0381 (7) | 0.0014 (6) | −0.0023 (6) | −0.0041 (6) |
Geometric parameters (Å, º) top
O1—C1 | 1.252 (2) | C11—C12 | 1.373 (3) |
O2—C1 | 1.252 (2) | C12—C13 | 1.392 (2) |
O3—C6 | 1.339 (2) | C13—C14 | 1.388 (2) |
O4—C8 | 1.202 (2) | O3—H3O | 0.85 (1) |
O5—C8 | 1.297 (2) | O5—H5O | 0.86 (1) |
O6—C13 | 1.337 (2) | O6—H6O | 0.86 (1) |
N1—C2 | 1.479 (2) | C2—H2A | 0.97 |
N1—C3 | 1.338 (2) | C2—H2B | 0.97 |
N1—C7 | 1.341 (2) | C3—H3 | 0.93 |
N2—C9 | 1.476 (2) | C4—H4 | 0.93 |
N2—C10 | 1.346 (2) | C5—H5 | 0.93 |
N2—C14 | 1.343 (2) | C7—H7 | 0.93 |
C1—C2 | 1.522 (2) | C9—H9A | 0.97 |
C3—C4 | 1.382 (2) | C9—H9B | 0.97 |
C4—C5 | 1.383 (3) | C10—H10 | 0.93 |
C5—C6 | 1.388 (2) | C11—H11 | 0.93 |
C6—C7 | 1.394 (2) | C12—H12 | 0.93 |
C8—C9 | 1.519 (2) | C14—H14 | 0.93 |
C10—C11 | 1.373 (3) | ||
C2—N1—C3 | 118.8 (1) | C8—O5—H5O | 104 (2) |
C2—N1—C7 | 119.2 (1) | C13—O6—H6O | 112 (2) |
C3—N1—C7 | 122.0 (1) | N1—C2—H2A | 109.1 |
C9—N2—C10 | 119.9 (2) | C1—C2—H2A | 109.1 |
C9—N2—C14 | 119.1 (1) | N1—C2—H2B | 109.1 |
C10—N2—C14 | 121.0 (2) | C1—C2—H2B | 109.1 |
O1—C1—O2 | 127.0 (2) | H2A—C2—H2B | 107.8 |
O1—C1—C2 | 114.7 (1) | N1—C3—H3 | 120.1 |
O2—C1—C2 | 118.3 (1) | C4—C3—H3 | 120.1 |
N1—C2—C1 | 112.6 (1) | C3—C4—H4 | 120.1 |
N1—C3—C4 | 119.8 (2) | C5—C4—H4 | 120.1 |
C3—C4—C5 | 119.8 (2) | C4—C5—H5 | 120.2 |
C4—C5—C6 | 119.6 (2) | C6—C5—H5 | 120.2 |
O3—C6—C5 | 124.3 (2) | N1—C7—H7 | 119.8 |
O3—C6—C7 | 117.2 (2) | C6—C7—H7 | 119.8 |
C5—C6—C7 | 118.5 (2) | N2—C9—H9A | 108.8 |
N1—C7—C6 | 120.4 (1) | C8—C9—H9A | 108.8 |
O4—C8—O5 | 126.3 (2) | N2—C9—H9B | 108.8 |
O4—C8—C9 | 119.5 (2) | C8—C9—H9B | 108.8 |
O5—C8—C9 | 114.2 (1) | H9A—C9—H9B | 107.7 |
N2—C9—C8 | 113.8 (1) | N2—C10—H10 | 120.0 |
N2—C10—C11 | 120.0 (2) | C11—C10—H10 | 120.0 |
C10—C11—C12 | 120.7 (2) | C10—C11—H11 | 119.7 |
C11—C12—C13 | 118.8 (2) | C12—C11—H11 | 119.7 |
O6—C13—C12 | 124.6 (2) | C11—C12—H12 | 120.6 |
O6—C13—C14 | 116.5 (1) | C13—C12—H12 | 120.6 |
C12—C13—C14 | 118.9 (2) | N2—C14—H14 | 119.7 |
N2—C14—C13 | 120.6 (1) | C13—C14—H14 | 119.7 |
C6—O3—H3O | 109 (2) | ||
C3—N1—C2—C1 | −84.2 (2) | C14—N2—C9—C8 | 88.0 (2) |
C7—N1—C2—C1 | 91.7 (2) | C10—N2—C9—C8 | −89.5 (2) |
O1—C1—C2—N1 | −173.1 (2) | O4—C8—C9—N2 | 170.3 (2) |
O2—C1—C2—N1 | 6.3 (2) | O5—C8—C9—N2 | −9.7 (2) |
C7—N1—C3—C4 | −0.2 (3) | C14—N2—C10—C11 | 0.1 (3) |
C2—N1—C3—C4 | 175.6 (2) | C9—N2—C10—C11 | 177.5 (2) |
N1—C3—C4—C5 | 0.6 (3) | N2—C10—C11—C12 | −0.4 (3) |
C3—C4—C5—C6 | −1.0 (3) | C10—C11—C12—C13 | 1.0 (3) |
C4—C5—C6—O3 | −179.6 (2) | C11—C12—C13—O6 | 179.3 (2) |
C4—C5—C6—C7 | 1.0 (3) | C11—C12—C13—C14 | −1.2 (3) |
C3—N1—C7—C6 | 0.2 (2) | C10—N2—C14—C13 | −0.3 (2) |
C2—N1—C7—C6 | −175.6 (1) | C9—N2—C14—C13 | −177.7 (2) |
O3—C6—C7—N1 | −180.0 (2) | O6—C13—C14—N2 | −179.6 (2) |
C5—C6—C7—N1 | −0.5 (2) | C12—C13—C14—N2 | 0.8 (2) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3O···Cl1 | 0.85 (1) | 2.15 (1) | 2.990 (2) | 171 (3) |
O5—H5O···O2 | 0.86 (1) | 1.68 (1) | 2.519 (2) | 165 (3) |
O6—H6O···O1i | 0.86 (1) | 1.72 (1) | 2.570 (2) | 169 (3) |
Symmetry code: (i) −x+3/2, y, z−1/2. |