Download citation
Download citation
link to html
In the title compound, [CuCl(C12H8N2)2](C8H4NO6)·2H2O, the coordination geometry of the Cu atom is best described as distorted trigonal bipyramidal, made up of four N atoms of two phenanthroline mol­ecules and one chloride anion. The 5-nitro­isophthalate(1−) anion is uncomplexed and balances the charge. π–π stacking and intermolecular hydrogen-bond interactions link the components units into a three-dimensional network structure.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536804023608/cv6377sup1.cif
Contains datablocks I, global

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S1600536804023608/cv6377Isup2.hkl
Contains datablock I

CCDC reference: 252948

Key indicators

  • Single-crystal X-ray study
  • T = 298 K
  • Mean [sigma](C-C) = 0.013 Å
  • R factor = 0.103
  • wR factor = 0.204
  • Data-to-parameter ratio = 12.2

checkCIF/PLATON results

No syntax errors found



Alert level C RFACG01_ALERT_3_C The value of the R factor is > 0.10 R factor given 0.103 PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ? PLAT242_ALERT_2_C Check Low U(eq) as Compared to Neighbors for N5 PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.59 PLAT309_ALERT_2_C Single Bonded Oxygen (C-O .GT. 1.3 Ang) ........ O3 PLAT341_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 13 PLAT417_ALERT_2_C Short Inter D-H..H-D H2A .. H7A .. 2.15 Ang. PLAT731_ALERT_1_C Bond Calc 0.80(5), Rep 0.805(19) ...... 2.63 su-Rat O7 -H7A 1.555 1.555 PLAT731_ALERT_1_C Bond Calc 0.83(7), Rep 0.83(2) ...... 3.50 su-Rat O8 -H8A 1.555 1.555 PLAT731_ALERT_1_C Bond Calc 0.82(6), Rep 0.82(2) ...... 3.00 su-Rat O8 -H8B 1.555 1.555
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 10 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 4 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 4 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion

Computing details top

Data collection: SMART (Bruker, 2002); cell refinement: SAINT (Bruker, 2002); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: XP (Bruker, 2002); software used to prepare material for publication: SHELXL97.

Chlorobis(1,10-phenanthroline)copper(II) 5-nitroisophthalate(1-) dihydrate top
Crystal data top
[CuCl(C12H8N2)2](C8H4NO6)·2H2OZ = 2
Mr = 705.55F(000) = 722
Triclinic, P1Dx = 1.566 Mg m3
Hall symbol: -P1Mo Kα radiation, λ = 0.71073 Å
a = 10.5099 (13) ÅCell parameters from 476 reflections
b = 12.1597 (14) Åθ = 2.6–24.1°
c = 12.5348 (14) ŵ = 0.88 mm1
α = 72.798 (3)°T = 298 K
β = 84.990 (2)°Rod, blue
γ = 77.968 (3)°0.13 × 0.06 × 0.05 mm
V = 1496.1 (3) Å3
Data collection top
Bruker APEX area-detector
diffractometer
5344 independent reflections
Radiation source: fine-focus sealed tube3112 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.097
φ and ω scansθmax = 25.2°, θmin = 1.7°
Absorption correction: integration
(SADABS; Bruker, 2002)
h = 1212
Tmin = 0.894, Tmax = 0.957k = 1414
11046 measured reflectionsl = 1515
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.103Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.204H atoms treated by a mixture of independent and constrained refinement
S = 1.08 w = 1/[σ2(Fo2) + (0.0578P)2 + 0.4686P]
where P = (Fo2 + 2Fc2)/3
5344 reflections(Δ/σ)max = 0.003
437 parametersΔρmax = 0.49 e Å3
6 restraintsΔρmin = 0.44 e Å3
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Cu10.26184 (9)0.49728 (8)0.30213 (8)0.0302 (3)
Cl10.4402 (2)0.36824 (19)0.3863 (2)0.0509 (7)
O10.2263 (7)0.9229 (7)0.6847 (6)0.085 (3)
O20.3405 (6)1.0228 (5)0.7469 (5)0.0510 (17)
H2A0.41300.98140.75890.077*
O30.3015 (6)1.0220 (5)1.1377 (5)0.0518 (18)
O40.1602 (6)0.9320 (5)1.2542 (5)0.0483 (17)
O50.0752 (8)0.7122 (7)0.9404 (7)0.095 (3)
O60.1052 (8)0.7212 (7)1.1073 (6)0.092 (3)
O70.4099 (7)0.0468 (5)0.2990 (5)0.0522 (17)
O80.3724 (10)0.9029 (11)0.5063 (6)0.143 (4)
N10.1512 (6)0.3758 (6)0.3277 (5)0.0336 (17)
N20.0868 (6)0.5927 (5)0.3455 (5)0.0306 (16)
N30.2745 (6)0.5367 (6)0.1216 (6)0.0360 (17)
N40.3627 (6)0.6272 (5)0.2637 (5)0.0316 (16)
N50.0519 (8)0.7450 (7)1.0166 (7)0.053 (2)
C10.1872 (9)0.2648 (8)0.3258 (7)0.046 (2)
H10.27490.23660.31380.055*
C20.1019 (9)0.1895 (9)0.3405 (8)0.055 (3)
H20.13190.11180.34070.066*
C30.0292 (9)0.2312 (9)0.3550 (7)0.048 (3)
H3A0.08930.18310.36180.057*
C40.0705 (8)0.3475 (8)0.3594 (6)0.034 (2)
C50.2036 (9)0.3972 (9)0.3767 (7)0.047 (2)
H50.26750.35330.38140.056*
C60.2378 (8)0.5079 (9)0.3865 (7)0.046 (2)
H60.32450.53830.39980.055*
C70.1423 (8)0.5774 (8)0.3765 (7)0.038 (2)
C80.1693 (9)0.6931 (8)0.3880 (7)0.048 (2)
H80.25410.72860.40150.057*
C90.0698 (9)0.7508 (8)0.3791 (7)0.048 (2)
H90.08640.82600.38750.058*
C100.0576 (8)0.6983 (7)0.3574 (6)0.039 (2)
H100.12390.74010.35120.046*
C110.0122 (8)0.5335 (7)0.3539 (6)0.034 (2)
C120.0227 (8)0.4161 (7)0.3447 (6)0.035 (2)
C130.2288 (9)0.4915 (8)0.0490 (8)0.048 (2)
H130.17390.43800.07690.057*
C140.2591 (10)0.5203 (8)0.0624 (8)0.054 (3)
H140.22260.48880.10880.064*
C150.3433 (10)0.5956 (8)0.1063 (8)0.054 (3)
H150.36440.61540.18230.064*
C160.3972 (8)0.6426 (7)0.0350 (7)0.038 (2)
C170.4883 (8)0.7207 (7)0.0708 (8)0.046 (3)
H170.51680.74010.14510.056*
C180.5329 (8)0.7659 (8)0.0002 (9)0.053 (3)
H180.59070.81700.02600.064*
C190.4928 (8)0.7367 (7)0.1173 (7)0.035 (2)
C200.5310 (8)0.7839 (7)0.1950 (8)0.045 (2)
H200.58720.83680.17290.054*
C210.4872 (8)0.7537 (7)0.3016 (8)0.043 (2)
H210.51200.78630.35300.052*
C220.4039 (8)0.6726 (7)0.3347 (7)0.038 (2)
H220.37670.65000.40930.046*
C230.4074 (7)0.6591 (6)0.1547 (7)0.030 (2)
C240.3590 (7)0.6110 (7)0.0794 (7)0.034 (2)
C250.2579 (9)0.9594 (8)0.7577 (8)0.049 (3)
C260.1954 (7)0.9226 (7)0.8720 (7)0.031 (2)
C270.2286 (7)0.9577 (7)0.9605 (7)0.034 (2)
H270.29161.00390.94820.041*
C280.1708 (8)0.9259 (7)1.0669 (6)0.032 (2)
C290.0764 (7)0.8577 (7)1.0848 (7)0.033 (2)
H290.03490.83701.15450.039*
C300.0442 (7)0.8208 (6)0.9982 (7)0.0303 (19)
C310.1027 (7)0.8533 (7)0.8921 (7)0.034 (2)
H310.07900.82820.83480.041*
C320.2090 (9)0.9603 (7)1.1632 (7)0.037 (2)
H7A0.379 (7)0.039 (6)0.246 (3)0.044*
H7B0.413 (8)0.007 (6)0.362 (2)0.044*
H8A0.329 (6)0.935 (6)0.551 (5)0.044*
H8B0.433 (6)0.847 (5)0.525 (5)0.044*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Cu10.0239 (6)0.0319 (6)0.0384 (6)0.0132 (4)0.0053 (4)0.0117 (5)
Cl10.0337 (13)0.0452 (14)0.0684 (18)0.0045 (11)0.0058 (12)0.0089 (12)
O10.096 (6)0.143 (7)0.063 (5)0.086 (6)0.038 (4)0.068 (5)
O20.036 (4)0.065 (4)0.057 (4)0.017 (3)0.015 (4)0.024 (4)
O30.072 (5)0.052 (4)0.046 (4)0.045 (4)0.007 (3)0.015 (3)
O40.058 (4)0.061 (4)0.038 (4)0.035 (3)0.009 (3)0.019 (3)
O50.125 (7)0.123 (7)0.074 (6)0.093 (6)0.013 (5)0.044 (5)
O60.113 (7)0.137 (7)0.054 (5)0.099 (6)0.030 (5)0.027 (5)
O70.057 (4)0.063 (5)0.047 (4)0.019 (4)0.004 (4)0.026 (4)
O80.126 (9)0.202 (12)0.057 (6)0.044 (8)0.021 (6)0.028 (7)
N10.031 (4)0.036 (4)0.039 (4)0.020 (3)0.009 (3)0.013 (3)
N20.030 (4)0.028 (4)0.034 (4)0.006 (3)0.001 (3)0.009 (3)
N30.036 (4)0.037 (4)0.046 (5)0.020 (3)0.001 (3)0.019 (4)
N40.032 (4)0.035 (4)0.034 (4)0.012 (3)0.001 (3)0.015 (3)
N50.055 (6)0.065 (6)0.050 (6)0.033 (5)0.001 (5)0.016 (5)
C10.041 (6)0.051 (6)0.052 (6)0.017 (5)0.005 (5)0.021 (5)
C20.063 (7)0.059 (7)0.065 (7)0.036 (6)0.013 (6)0.039 (6)
C30.049 (6)0.072 (7)0.034 (6)0.036 (6)0.012 (5)0.019 (5)
C40.034 (5)0.051 (6)0.022 (5)0.022 (4)0.001 (4)0.009 (4)
C50.040 (6)0.064 (7)0.043 (6)0.027 (5)0.007 (5)0.010 (5)
C60.021 (5)0.075 (7)0.037 (6)0.011 (5)0.003 (4)0.006 (5)
C70.030 (5)0.048 (6)0.031 (5)0.010 (4)0.001 (4)0.003 (4)
C80.040 (6)0.061 (7)0.036 (6)0.002 (5)0.002 (4)0.010 (5)
C90.059 (7)0.044 (6)0.040 (6)0.003 (5)0.007 (5)0.016 (5)
C100.038 (5)0.042 (6)0.032 (5)0.006 (4)0.005 (4)0.007 (4)
C110.037 (5)0.042 (5)0.021 (5)0.002 (4)0.007 (4)0.006 (4)
C120.043 (6)0.046 (6)0.021 (5)0.022 (5)0.001 (4)0.006 (4)
C130.054 (6)0.052 (6)0.045 (6)0.014 (5)0.011 (5)0.026 (5)
C140.070 (7)0.055 (7)0.044 (6)0.005 (6)0.012 (5)0.029 (5)
C150.081 (8)0.049 (6)0.028 (5)0.005 (6)0.005 (5)0.008 (5)
C160.041 (5)0.028 (5)0.038 (5)0.004 (4)0.005 (4)0.008 (4)
C170.043 (6)0.040 (6)0.046 (6)0.009 (5)0.021 (5)0.001 (5)
C180.034 (6)0.047 (6)0.074 (8)0.020 (5)0.019 (5)0.009 (5)
C190.030 (5)0.025 (5)0.045 (6)0.007 (4)0.005 (4)0.003 (4)
C200.045 (6)0.036 (5)0.054 (7)0.019 (5)0.002 (5)0.007 (5)
C210.032 (5)0.035 (5)0.074 (7)0.005 (4)0.008 (5)0.031 (5)
C220.039 (5)0.037 (5)0.041 (6)0.013 (4)0.003 (4)0.012 (4)
C230.027 (5)0.022 (4)0.044 (6)0.005 (4)0.003 (4)0.013 (4)
C240.023 (5)0.032 (5)0.043 (6)0.007 (4)0.004 (4)0.012 (4)
C250.035 (6)0.066 (7)0.055 (7)0.026 (5)0.010 (5)0.024 (5)
C260.029 (5)0.030 (5)0.037 (5)0.011 (4)0.005 (4)0.012 (4)
C270.024 (5)0.033 (5)0.045 (6)0.006 (4)0.005 (4)0.010 (4)
C280.040 (5)0.034 (5)0.026 (5)0.016 (4)0.005 (4)0.008 (4)
C290.022 (4)0.037 (5)0.034 (5)0.003 (4)0.002 (4)0.004 (4)
C300.032 (5)0.026 (5)0.034 (5)0.011 (4)0.000 (4)0.007 (4)
C310.028 (5)0.039 (5)0.046 (6)0.014 (4)0.001 (4)0.021 (4)
C320.050 (6)0.028 (5)0.035 (6)0.009 (4)0.003 (5)0.011 (4)
Geometric parameters (Å, º) top
Cu1—N12.002 (6)C7—C81.424 (11)
Cu1—N42.002 (6)C8—C91.356 (11)
Cu1—N22.082 (6)C8—H80.9300
Cu1—N32.168 (7)C9—C101.399 (11)
Cu1—Cl12.287 (2)C9—H90.9300
O1—C251.225 (10)C10—H100.9300
O2—C251.251 (9)C11—C121.435 (11)
O2—H2A0.8200C13—C141.361 (11)
O3—C321.312 (9)C13—H130.9300
O4—C321.192 (9)C14—C151.371 (12)
O5—N51.199 (9)C14—H140.9300
O6—N51.205 (9)C15—C161.404 (11)
O7—H7A0.805 (19)C15—H150.9300
O7—H7B0.796 (19)C16—C241.415 (11)
O8—H8A0.83 (2)C16—C171.439 (11)
O8—H8B0.82 (2)C17—C181.335 (12)
N1—C11.330 (10)C17—H170.9300
N1—C121.359 (10)C18—C191.451 (12)
N2—C101.307 (9)C18—H180.9300
N2—C111.363 (9)C19—C201.389 (11)
N3—C131.357 (10)C19—C231.391 (10)
N3—C241.362 (9)C20—C211.343 (11)
N4—C221.321 (9)C20—H200.9300
N4—C231.373 (9)C21—C221.402 (10)
N5—C301.465 (10)C21—H210.9300
C1—C21.375 (11)C22—H220.9300
C1—H10.9300C23—C241.423 (10)
C2—C31.381 (12)C25—C261.504 (11)
C2—H20.9300C26—C311.377 (10)
C3—C41.405 (11)C26—C271.395 (10)
C3—H3A0.9300C27—C281.396 (10)
C4—C121.381 (10)C27—H270.9300
C4—C51.429 (11)C28—C291.384 (10)
C5—C61.358 (11)C28—C321.499 (11)
C5—H50.9300C29—C301.382 (10)
C6—C71.417 (11)C29—H290.9300
C6—H60.9300C30—C311.397 (10)
C7—C111.397 (11)C31—H310.9300
N1—Cu1—N4174.6 (3)N1—C12—C11116.4 (7)
N1—Cu1—N281.0 (3)C4—C12—C11120.5 (8)
N4—Cu1—N297.1 (2)N3—C13—C14123.5 (9)
N1—Cu1—N396.3 (2)N3—C13—H13118.3
N4—Cu1—N379.4 (2)C14—C13—H13118.3
N2—Cu1—N3108.1 (2)C13—C14—C15120.2 (9)
N1—Cu1—Cl194.8 (2)C13—C14—H14119.9
N4—Cu1—Cl189.93 (19)C15—C14—H14119.9
N2—Cu1—Cl1139.31 (19)C14—C15—C16119.1 (9)
N3—Cu1—Cl1112.61 (19)C14—C15—H15120.5
C25—O2—H2A109.5C16—C15—H15120.5
H7A—O7—H7B131 (4)C15—C16—C24117.7 (8)
H8A—O8—H8B123 (4)C15—C16—C17124.3 (9)
C1—N1—C12117.6 (7)C24—C16—C17118.1 (8)
C1—N1—Cu1128.4 (6)C18—C17—C16121.6 (8)
C12—N1—Cu1114.0 (5)C18—C17—H17119.2
C10—N2—C11117.8 (7)C16—C17—H17119.2
C10—N2—Cu1131.1 (6)C17—C18—C19121.2 (8)
C11—N2—Cu1111.0 (5)C17—C18—H18119.4
C13—N3—C24117.0 (7)C19—C18—H18119.4
C13—N3—Cu1132.6 (6)C20—C19—C23117.2 (8)
C24—N3—Cu1109.8 (5)C20—C19—C18124.4 (8)
C22—N4—C23117.8 (7)C23—C19—C18118.4 (8)
C22—N4—Cu1126.4 (6)C21—C20—C19120.5 (8)
C23—N4—Cu1115.2 (5)C21—C20—H20119.7
O5—N5—O6123.7 (8)C19—C20—H20119.7
O5—N5—C30118.5 (8)C20—C21—C22119.5 (8)
O6—N5—C30117.7 (8)C20—C21—H21120.2
N1—C1—C2123.7 (9)C22—C21—H21120.2
N1—C1—H1118.2N4—C22—C21122.2 (8)
C2—C1—H1118.2N4—C22—H22118.9
C1—C2—C3118.7 (9)C21—C22—H22118.9
C1—C2—H2120.6N4—C23—C19122.7 (7)
C3—C2—H2120.6N4—C23—C24116.6 (7)
C2—C3—C4119.1 (8)C19—C23—C24120.7 (8)
C2—C3—H3A120.4N3—C24—C16122.5 (8)
C4—C3—H3A120.4N3—C24—C23117.5 (7)
C12—C4—C3117.8 (8)C16—C24—C23120.0 (8)
C12—C4—C5119.2 (8)O1—C25—O2125.8 (9)
C3—C4—C5123.0 (8)O1—C25—C26117.8 (8)
C6—C5—C4120.8 (8)O2—C25—C26116.4 (8)
C6—C5—H5119.6C31—C26—C27117.9 (7)
C4—C5—H5119.6C31—C26—C25120.7 (8)
C5—C6—C7120.5 (8)C27—C26—C25121.4 (7)
C5—C6—H6119.8C26—C27—C28122.4 (8)
C7—C6—H6119.8C26—C27—H27118.8
C11—C7—C6120.2 (8)C28—C27—H27118.8
C11—C7—C8115.8 (8)C29—C28—C27118.7 (7)
C6—C7—C8124.0 (8)C29—C28—C32118.6 (7)
C9—C8—C7119.0 (8)C27—C28—C32122.6 (7)
C9—C8—H8120.5C30—C29—C28119.4 (7)
C7—C8—H8120.5C30—C29—H29120.3
C8—C9—C10120.7 (9)C28—C29—H29120.3
C8—C9—H9119.7C29—C30—C31121.3 (7)
C10—C9—H9119.7C29—C30—N5120.3 (7)
N2—C10—C9122.3 (8)C31—C30—N5118.4 (7)
N2—C10—H10118.8C26—C31—C30120.2 (8)
C9—C10—H10118.8C26—C31—H31119.9
N2—C11—C7124.4 (8)C30—C31—H31119.9
N2—C11—C12116.8 (7)O4—C32—O3124.0 (8)
C7—C11—C12118.7 (8)O4—C32—C28122.4 (8)
N1—C12—C4123.0 (8)O3—C32—C28113.6 (7)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O8—H8B···Cl1i0.82 (6)2.64 (4)3.420 (10)160 (8)
O8—H8A···O10.83 (7)1.90 (5)2.642 (10)149 (8)
O7—H7B···O8ii0.80 (3)1.95 (3)2.718 (11)163 (7)
O7—H7A···O3iii0.80 (5)1.73 (6)2.526 (8)176 (8)
O2—H2A···O7i0.821.942.651 (9)145
Symmetry codes: (i) x+1, y+1, z+1; (ii) x, y1, z; (iii) x, y1, z1.
 

Follow Acta Cryst. E
Sign up for e-alerts
Follow Acta Cryst. on Twitter
Follow us on facebook
Sign up for RSS feeds