The crystal structure of pentazocine hydrochloride [systematic name: 2-hydroxy-5,9-dimethyl-2-(3-methylbuten-2-yl)-6,7-benzomorphanium chloride], C19H28NO+·Cl-, has been determined at 105 K and found to be a second polymorphic form with space group C2/c. The space group and the unit-cell parameters are different from a reported crystal structure at 293 K [Majeste, Poindexter, Jones & Klein (1994). Acta Cryst. C50, 1633-1636]. There are only small differences in the molecular conformation, but the association between the protonated pentazocine molecules and the chloride ion is different.
Supporting information
CCDC reference: 269562
Key indicators
- Single-crystal X-ray study
- T = 105 K
- Mean (C-C) = 0.002 Å
- R factor = 0.036
- wR factor = 0.102
- Data-to-parameter ratio = 14.7
checkCIF/PLATON results
No syntax errors found
Alert level A
PLAT222_ALERT_3_A Large Non-Solvent H Ueq(max)/Ueq(min) ... 6.23 Ratio
| Author Response: 'see _publ_section_exptl-refinement'
|
Alert level B
PLAT220_ALERT_2_B Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.80 Ratio
PLAT733_ALERT_1_B Torsion Calc -87.93(13), Rep -87.9(10) ...... 7.69 su-Rat
C13 -C5 -C6 -C7 1.555 1.555 1.555 1.555
PLAT733_ALERT_1_B Torsion Calc 64.31(13), Rep 64.3(10) ...... 7.69 su-Rat
C6 -C5 -C10 -C11 1.555 1.555 1.555 1.555
PLAT733_ALERT_1_B Torsion Calc 177.82(17), Rep 177.8(10) ...... 5.88 su-Rat
C15 -C16 -C17 -C19 1.555 1.555 1.555 1.555
Alert level C
PLAT125_ALERT_4_C No _symmetry_space_group_name_Hall Given ....... ?
PLAT152_ALERT_1_C Supplied and Calc Volume s.u. Inconsistent ..... ?
PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C17
1 ALERT level A = In general: serious problem
4 ALERT level B = Potentially serious problem
3 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
4 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
2 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
1 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: SMART (Bruker, 1998); cell refinement: SAINT (Bruker, 1998); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Bruker, 2000); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
2-Hydroxy-5,9-dimethyl-2-(3-methylbuten-2-yl)-6,7-benzomorphanium chloride
top
Crystal data top
C19H28NO+·Cl− | F(000) = 1392 |
Mr = 321.87 | Dx = 1.160 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
a = 24.541 (5) Å | Cell parameters from 23580 reflections |
b = 11.537 (2) Å | θ = 2.3–28.4° |
c = 14.897 (3) Å | µ = 0.21 mm−1 |
β = 119.05 (3)° | T = 105 K |
V = 3687 (1) Å3 | Needle, colorless |
Z = 8 | 0.5 × 0.2 × 0.2 mm |
Data collection top
Bruker SMART diffractometer | 4582 independent reflections |
Radiation source: fine-focus sealed tube | 4113 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.025 |
Detector resolution: 8 pixels mm-1 | θmax = 28.3°, θmin = 2.3° |
ω scans | h = −32→32 |
Absorption correction: multi-scan (SADABS; Sheldrick, 1997) | k = −15→15 |
Tmin = 0.896, Tmax = 0.957 | l = −19→19 |
28837 measured reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: structure-invariant direct methods |
R[F2 > 2σ(F2)] = 0.036 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.102 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0594P)2 + 2.1933P] where P = (Fo2 + 2Fc2)/3 |
4582 reflections | (Δ/σ)max = 0.001 |
311 parameters | Δρmax = 0.38 e Å−3 |
0 restraints | Δρmin = −0.25 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
2σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Cl1 | 0.099357 (13) | 0.94822 (2) | 0.46915 (2) | 0.02873 (9) | |
O1 | 0.26950 (5) | 0.49359 (9) | 1.00396 (7) | 0.0378 (2) | |
H20 | 0.3034 (10) | 0.4755 (19) | 1.0028 (16) | 0.062 (6)* | |
N1 | 0.09920 (4) | 0.03564 (7) | 0.66765 (7) | 0.02093 (18) | |
H1N | 0.1018 (7) | 0.0096 (13) | 0.6127 (12) | 0.030 (4)* | |
C1 | 0.22452 (5) | 0.36806 (9) | 0.85493 (8) | 0.0241 (2) | |
H1 | 0.2615 (7) | 0.3774 (13) | 0.8469 (11) | 0.029 (3)* | |
C2 | 0.22244 (5) | 0.42351 (10) | 0.93631 (8) | 0.0277 (2) | |
C3 | 0.17022 (6) | 0.41082 (11) | 0.94911 (9) | 0.0319 (3) | |
H3 | 0.1698 (8) | 0.4493 (14) | 1.0057 (13) | 0.037 (4)* | |
C4 | 0.12101 (6) | 0.34253 (10) | 0.88100 (9) | 0.0286 (2) | |
H4 | 0.0842 (7) | 0.3329 (13) | 0.8898 (12) | 0.032 (4)* | |
C5 | 0.17658 (5) | 0.24072 (9) | 0.69511 (8) | 0.0227 (2) | |
C6 | 0.17411 (5) | 0.30117 (9) | 0.78432 (8) | 0.0210 (2) | |
C7 | 0.12187 (5) | 0.28734 (9) | 0.79801 (8) | 0.0222 (2) | |
C8 | 0.06565 (5) | 0.21538 (9) | 0.72593 (8) | 0.0231 (2) | |
H8B | 0.0275 (6) | 0.2694 (13) | 0.6916 (11) | 0.027 (3)* | |
H8A | 0.0573 (7) | 0.1594 (13) | 0.7657 (12) | 0.032 (4)* | |
C9 | 0.07065 (5) | 0.15551 (9) | 0.63857 (8) | 0.0211 (2) | |
H9 | 0.0283 (6) | 0.1437 (12) | 0.5807 (11) | 0.022 (3)* | |
C10 | 0.10965 (5) | 0.22675 (9) | 0.60363 (8) | 0.0227 (2) | |
H10 | 0.1118 (6) | 0.1838 (12) | 0.5489 (11) | 0.026 (3)* | |
C11 | 0.07663 (6) | 0.34145 (10) | 0.55662 (9) | 0.0299 (2) | |
H11A | 0.0997 (7) | 0.3866 (14) | 0.5273 (12) | 0.035 (4)* | |
H11B | 0.0730 (7) | 0.3888 (14) | 0.6054 (12) | 0.035 (4)* | |
H11C | 0.0337 (8) | 0.3278 (15) | 0.5023 (14) | 0.045 (4)* | |
C12 | 0.21778 (6) | 0.30478 (12) | 0.65991 (10) | 0.0324 (3) | |
H12A | 0.2048 (7) | 0.3879 (15) | 0.6444 (12) | 0.038 (4)* | |
H12B | 0.2631 (8) | 0.2972 (14) | 0.7133 (12) | 0.036 (4)* | |
H12C | 0.2121 (8) | 0.2707 (15) | 0.5952 (14) | 0.046 (5)* | |
C13 | 0.20434 (5) | 0.11782 (10) | 0.72961 (9) | 0.0267 (2) | |
H13B | 0.2092 (7) | 0.0847 (13) | 0.6752 (12) | 0.032 (4)* | |
H13A | 0.2458 (7) | 0.1220 (13) | 0.7906 (12) | 0.032 (4)* | |
C14 | 0.16422 (5) | 0.04027 (9) | 0.75593 (9) | 0.0244 (2) | |
H14B | 0.1623 (6) | 0.0668 (12) | 0.8145 (11) | 0.022 (3)* | |
H14A | 0.1791 (7) | −0.0400 (14) | 0.7685 (13) | 0.034 (4)* | |
C15 | 0.05989 (5) | −0.05115 (9) | 0.68776 (9) | 0.0259 (2) | |
H15A | 0.0679 (7) | −0.0342 (12) | 0.7569 (12) | 0.026 (3)* | |
H15B | 0.0169 (7) | −0.0315 (13) | 0.6411 (12) | 0.032 (4)* | |
C16 | 0.07649 (6) | −0.17209 (10) | 0.67229 (9) | 0.0274 (2) | |
H16 | 0.0701 (7) | −0.1878 (14) | 0.6048 (13) | 0.039 (4)* | |
C17 | 0.09693 (7) | −0.25768 (10) | 0.74021 (10) | 0.0345 (3) | |
C18 | 0.10961 (15) | −0.24819 (15) | 0.84893 (14) | 0.0798 (8) | |
H18A | 0.1089 | −0.1681 | 0.8658 | 0.085 (7)* | |
H18B | 0.1498 | −0.2806 | 0.8942 | 0.137 (13)* | |
H18C | 0.0782 | −0.2898 | 0.8565 | 0.122 (11)* | |
C19 | 0.10942 (10) | −0.37613 (12) | 0.71111 (13) | 0.0476 (4) | |
H19A | 0.1011 (8) | −0.3794 (15) | 0.6372 (14) | 0.045 (4)* | |
H19C | 0.0801 (11) | −0.4301 (19) | 0.7177 (17) | 0.070 (6)* | |
H19B | 0.1539 (11) | −0.402 (2) | 0.7588 (18) | 0.074 (7)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cl1 | 0.03206 (15) | 0.02966 (15) | 0.02503 (15) | 0.00280 (10) | 0.01432 (12) | −0.00276 (9) |
O1 | 0.0338 (5) | 0.0455 (5) | 0.0279 (4) | −0.0098 (4) | 0.0101 (4) | −0.0150 (4) |
N1 | 0.0214 (4) | 0.0189 (4) | 0.0223 (4) | −0.0009 (3) | 0.0104 (3) | −0.0006 (3) |
C1 | 0.0238 (5) | 0.0250 (5) | 0.0218 (5) | −0.0029 (4) | 0.0096 (4) | −0.0014 (4) |
C2 | 0.0295 (5) | 0.0277 (5) | 0.0207 (5) | −0.0030 (4) | 0.0082 (4) | −0.0036 (4) |
C3 | 0.0375 (6) | 0.0347 (6) | 0.0255 (5) | −0.0013 (5) | 0.0169 (5) | −0.0073 (5) |
C4 | 0.0302 (5) | 0.0310 (6) | 0.0288 (5) | −0.0008 (4) | 0.0177 (5) | −0.0039 (4) |
C5 | 0.0236 (5) | 0.0236 (5) | 0.0229 (5) | −0.0053 (4) | 0.0128 (4) | −0.0041 (4) |
C6 | 0.0230 (5) | 0.0197 (4) | 0.0197 (4) | −0.0005 (4) | 0.0099 (4) | −0.0001 (4) |
C7 | 0.0237 (5) | 0.0205 (5) | 0.0225 (5) | 0.0006 (4) | 0.0112 (4) | −0.0001 (4) |
C8 | 0.0217 (5) | 0.0225 (5) | 0.0265 (5) | −0.0002 (4) | 0.0127 (4) | −0.0011 (4) |
C9 | 0.0203 (4) | 0.0187 (4) | 0.0215 (5) | 0.0002 (4) | 0.0080 (4) | 0.0004 (3) |
C10 | 0.0263 (5) | 0.0210 (5) | 0.0202 (5) | −0.0034 (4) | 0.0109 (4) | −0.0018 (4) |
C11 | 0.0371 (6) | 0.0226 (5) | 0.0252 (5) | −0.0026 (4) | 0.0113 (5) | 0.0020 (4) |
C12 | 0.0354 (6) | 0.0374 (6) | 0.0314 (6) | −0.0132 (5) | 0.0219 (5) | −0.0083 (5) |
C13 | 0.0211 (5) | 0.0271 (5) | 0.0322 (6) | −0.0009 (4) | 0.0131 (4) | −0.0061 (4) |
C14 | 0.0203 (5) | 0.0219 (5) | 0.0257 (5) | 0.0025 (4) | 0.0070 (4) | 0.0006 (4) |
C15 | 0.0266 (5) | 0.0212 (5) | 0.0307 (6) | −0.0022 (4) | 0.0145 (4) | 0.0018 (4) |
C16 | 0.0337 (6) | 0.0218 (5) | 0.0253 (5) | −0.0033 (4) | 0.0132 (4) | −0.0023 (4) |
C17 | 0.0509 (7) | 0.0234 (5) | 0.0319 (6) | 0.0012 (5) | 0.0221 (6) | 0.0009 (4) |
C18 | 0.172 (2) | 0.0362 (8) | 0.0444 (9) | 0.0232 (12) | 0.0630 (13) | 0.0116 (7) |
C19 | 0.0774 (11) | 0.0231 (6) | 0.0483 (8) | 0.0050 (6) | 0.0354 (8) | 0.0018 (5) |
Geometric parameters (Å, º) top
O1—C2 | 1.369 (1) | C10—H10 | 0.98 (2) |
O1—H20 | 0.87 (2) | C11—H11A | 1.01 (2) |
N1—C14 | 1.497 (2) | C11—H11B | 0.95 (2) |
N1—C9 | 1.515 (1) | C11—H11C | 0.98 (2) |
N1—C15 | 1.518 (1) | C12—H12A | 1.00 (2) |
N1—H1N | 0.90 (2) | C12—H12B | 1.01 (2) |
C1—C2 | 1.393 (2) | C12—H12C | 0.99 (2) |
C1—C6 | 1.403 (2) | C13—C14 | 1.516 (2) |
C1—H1 | 0.97 (2) | C13—H13B | 0.95 (2) |
C2—C3 | 1.392 (2) | C13—H13A | 0.98 (2) |
C3—C4 | 1.385 (2) | C14—H14B | 0.95 (2) |
C3—H3 | 0.96 (2) | C14—H14A | 0.98 (2) |
C4—C7 | 1.400 (2) | C15—C16 | 1.502 (2) |
C4—H4 | 0.98 (2) | C15—H15A | 0.97 (2) |
C5—C6 | 1.528 (1) | C15—H15B | 0.97 (2) |
C5—C12 | 1.536 (2) | C16—C17 | 1.326 (2) |
C5—C13 | 1.549 (2) | C16—H16 | 0.96 (2) |
C5—C10 | 1.552 (2) | C17—C18 | 1.498 (2) |
C6—C7 | 1.402 (2) | C17—C19 | 1.509 (2) |
C7—C8 | 1.519 (2) | C18—H18A | 0.9600 |
C8—C9 | 1.530 (2) | C18—H18B | 0.9600 |
C8—H8B | 1.03 (1) | C18—H18C | 0.9600 |
C8—H8A | 0.96 (2) | C19—H19A | 1.02 (2) |
C9—C10 | 1.532 (1) | C19—H19C | 0.99 (2) |
C9—H9 | 0.99 (1) | C19—H19B | 1.02 (2) |
C10—C11 | 1.532 (2) | | |
| | | |
C2—O1—H20 | 108 (1) | C10—C11—H11A | 111 (1) |
C14—N1—C9 | 111.4 (1) | C10—C11—H11B | 111 (1) |
C14—N1—C15 | 111.0 (1) | H11A—C11—H11B | 108 (1) |
C9—N1—C15 | 114.1 (1) | C10—C11—H11C | 110 (1) |
C14—N1—H1N | 107 (1) | H11A—C11—H11C | 109 (1) |
C9—N1—H1N | 105 (1) | H11B—C11—H11C | 105 (1) |
C15—N1—H1N | 107 (1) | C5—C12—H12A | 110 (1) |
C2—C1—C6 | 120.9 (1) | C5—C12—H12B | 110 (1) |
C2—C1—H1 | 119 (1) | H12A—C12—H12B | 111 (1) |
C6—C1—H1 | 120 (1) | C5—C12—H12C | 109 (1) |
O1—C2—C3 | 117.7 (1) | H12A—C12—H12C | 106 (1) |
O1—C2—C1 | 122.5 (1) | H12B—C12—H12C | 108 (1) |
C3—C2—C1 | 119.7 (1) | C14—C13—C5 | 112.9 (1) |
C4—C3—C2 | 119.5 (1) | C14—C13—H13B | 110 (1) |
C4—C3—H3 | 122 (1) | C5—C13—H13B | 107 (1) |
C2—C3—H3 | 118 (1) | C14—C13—H13A | 107 (1) |
C3—C4—C7 | 121.6 (1) | C5—C13—H13A | 110 (1) |
C3—C4—H4 | 119 (1) | H13B—C13—H13A | 107 (1) |
C7—C4—H4 | 118 (1) | N1—C14—C13 | 110.1 (1) |
C6—C5—C12 | 112.8 (1) | N1—C14—H14B | 108 (1) |
C6—C5—C13 | 109.0 (1) | C13—C14—H14B | 112 (1) |
C12—C5—C13 | 107.3 (1) | N1—C14—H14A | 106 (1) |
C6—C5—C10 | 109.8 (1) | C13—C14—H14A | 112 (1) |
C12—C5—C10 | 110.0 (1) | H14B—C14—H14A | 108 (1) |
C13—C5—C10 | 107.7 (1) | C16—C15—N1 | 109.7 (1) |
C7—C6—C1 | 119.3 (1) | C16—C15—H15A | 115 (1) |
C7—C6—C5 | 120.0 (1) | N1—C15—H15A | 105 (1) |
C1—C6—C5 | 120.7 (1) | C16—C15—H15B | 113 (1) |
C4—C7—C6 | 118.9 (1) | N1—C15—H15B | 106 (1) |
C4—C7—C8 | 118.4 (1) | H15A—C15—H15B | 108 (1) |
C6—C7—C8 | 122.7 (1) | C17—C16—C15 | 127.2 (1) |
C7—C8—C9 | 115.3 (1) | C17—C16—H16 | 118 (1) |
C7—C8—H8B | 108 (1) | C15—C16—H16 | 115 (1) |
C9—C8—H8B | 106 (1) | C16—C17—C18 | 125.0 (1) |
C7—C8—H8A | 108 (1) | C16—C17—C19 | 120.6 (1) |
C9—C8—H8A | 110 (1) | C18—C17—C19 | 114.4 (1) |
H8B—C8—H8A | 107 (1) | C17—C18—H18A | 109 |
N1—C9—C8 | 112.7 (1) | C17—C18—H18B | 109 |
N1—C9—C10 | 108.0 (1) | H18A—C18—H18B | 109 |
C8—C9—C10 | 111.6 (1) | C17—C18—H18C | 109 |
N1—C9—H9 | 105 (1) | H18A—C18—H18C | 109 |
C8—C9—H9 | 108 (1) | H18B—C18—H18C | 109 |
C10—C9—H9 | 110 (1) | C17—C19—H19A | 113 (1) |
C11—C10—C9 | 109.9 (1) | C17—C19—H19C | 106 (1) |
C11—C10—C5 | 114.2 (1) | H19A—C19—H19C | 108 (2) |
C9—C10—C5 | 109.0 (1) | C17—C19—H19B | 111 (1) |
C11—C10—H10 | 106 (1) | H19A—C19—H19B | 109 (2) |
C9—C10—H10 | 107 (1) | H19C—C19—H19B | 109 (2) |
C5—C10—H10 | 108 (1) | | |
| | | |
C6—C1—C2—O1 | −177.0 (1) | C15—N1—C9—C10 | −170.7 (1) |
C6—C1—C2—C3 | 1.2 (2) | C7—C8—C9—N1 | 89.8 (1) |
O1—C2—C3—C4 | 178.7 (1) | C7—C8—C9—C10 | −31.9 (1) |
C1—C2—C3—C4 | 0.4 (2) | N1—C9—C10—C11 | 170.6 (1) |
C2—C3—C4—C7 | −1.2 (2) | C8—C9—C10—C11 | −65.0 (1) |
C2—C1—C6—C7 | −2.0 (2) | N1—C9—C10—C5 | −63.4 (1) |
C2—C1—C6—C5 | 179.9 (1) | C8—C9—C10—C5 | 61.0 (1) |
C12—C5—C6—C7 | 153.0 (1) | C6—C5—C10—C11 | 64.3 (10) |
C13—C5—C6—C7 | −87.9 (10) | C12—C5—C10—C11 | −60.4 (1) |
C10—C5—C6—C7 | 29.9 (1) | C13—C5—C10—C11 | −177.1 (1) |
C12—C5—C6—C1 | −28.9 (1) | C6—C5—C10—C9 | −59.1 (1) |
C13—C5—C6—C1 | 90.2 (1) | C12—C5—C10—C9 | 176.2 (1) |
C10—C5—C6—C1 | −152.0 (1) | C13—C5—C10—C9 | 59.5 (1) |
C3—C4—C7—C6 | 0.5 (2) | C6—C5—C13—C14 | 63.6 (1) |
C3—C4—C7—C8 | −179.1 (1) | C12—C5—C13—C14 | −173.9 (1) |
C1—C6—C7—C4 | 1.1 (2) | C10—C5—C13—C14 | −55.6 (1) |
C5—C6—C7—C4 | 179.3 (1) | C9—N1—C14—C13 | −57.5 (1) |
C1—C6—C7—C8 | −179.3 (1) | C15—N1—C14—C13 | 174.1 (1) |
C5—C6—C7—C8 | −1.2 (2) | C5—C13—C14—N1 | 54.5 (1) |
C4—C7—C8—C9 | −178.7 (1) | C14—N1—C15—C16 | −76.5 (1) |
C6—C7—C8—C9 | 1.8 (2) | C9—N1—C15—C16 | 156.5 (1) |
C14—N1—C9—C8 | −61.2 (1) | N1—C15—C16—C17 | 122.0 (1) |
C15—N1—C9—C8 | 65.5 (1) | C15—C16—C17—C18 | −2.2 (3) |
C14—N1—C9—C10 | 62.5 (1) | C15—C16—C17—C19 | 177.8 (10) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C15—H15B···Cl1i | 0.97 (2) | 2.69 (2) | 3.644 (2) | 171 (1) |
N1—H1N···Cl1ii | 0.90 (2) | 2.23 (2) | 3.126 (1) | 175 (1) |
O1—H20···Cl1iii | 0.87 (2) | 2.24 (2) | 3.089 (1) | 168 (2) |
C14—H14B···O1iv | 0.95 (2) | 2.49 (1) | 3.153 (2) | 127 (1) |
Symmetry codes: (i) −x, −y+1, −z+1; (ii) x, y−1, z; (iii) −x+1/2, y−1/2, −z+3/2; (iv) −x+1/2, −y+1/2, −z+2. |