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Volume 61 
Part 3 
Pages o609-o611  
March 2005  

Received 1 February 2005
Accepted 2 February 2005
Online 12 February 2005

Key indicators
Single-crystal X-ray study
T = 260 K
Mean [sigma](C-C) = 0.003 Å
R = 0.045
wR = 0.134
Data-to-parameter ratio = 16.0
Details

3,5-Dinitrobenzoic acid-dimethyl sulfoxide (1/1)

aDepartment of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, England, and bPfizer Institute for Pharmaceutical Materials Science, Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, England
Correspondence e-mail: avt21@cam.ac.uk

The title complex, C7H4N2O6·C2H6OS, involves an intermolecular hydrogen-bond motif between the carboxyl and the sulfoxide groups. This motif has precedence in the Cambridge Structural Database, and is shown here to be more favourable than a possible carboxylic acid homodimer.

Comment

As part of ongoing research into the crystallization preferences of crystalline complexes, the growth of a previously reported three-component crystalline complex (Pedireddi et al., 1996[Pedireddi, V. R., Jones, W., Chorlton, A. P. & Docherty, R. (1996). Chem. Commun. p. 987.]) was attempted. The solvent dimethyl sulfoxide (DMSO) was used to aid dissolution of the components. In several instances, the crystallization unexpectedly resulted in single crystals of the title adduct, (I[link]). The asymmetric unit consists of one molecule each of 3,5-dinitrobenzoic acid (3,5-DNBA) and DMSO (Fig. 1[link]).[link]

[Scheme 1]

Previously reported crystallizations of 3,5-DNBA indicate a dimorphic nature for this substance. Two monoclinic polymorphs have been reported (Prince et al., 1991[Prince, P., Fronczek, F. R. & Gandour, R. D. (1991). Acta Cryst. C47, 895-898.]) and both exhibit the common carboxylic acid dimer hydrogen-bond motif. The interaction between 3,5-DNBA and DMSO described here involves a hydrogen bond between the carboxyl moiety of the acid and the sulfoxide group of the solvent (Fig. 2[link]). It is interesting, therefore, that the title complex represents the disruption of the carboxylic acid dimer by the introduction of the sulfoxide moiety upon complexation.

A search of the Cambridge Structural Database (CSD, Version 5.25, Update 3; Allen, 2002[Allen, F. H. (2002). Acta Cryst. B58, 380-388.]) reveals precedence for this acid-DMSO interaction. Searching for structures which contain both a carboxyl moiety and a DMSO molecule among all organic structures for which three-dimensional coordinates have been determined resulted in 37 hits. Of those, 29 complexes exhibit an O-H...O=S hydrogen bond which is shorter than the sum of the van der Waals radii of the two O atoms. The apparent substantial likelihood of the formation of this motif indicates a potential utility for crystal engineering experimental design.

Crystal packing results in what may be perceived as alternating sheets of 3,5-DNBA and DMSO stacking along [001] (Figs. 3[link] and 4[link]).

[Figure 1]
Figure 1
The asymmetric unit of (I[link]), showing displacement ellipsoids at the 50% probability level (XP; Sheldrick, 1993[Sheldrick, G. M. (1993). XP. University of Göttingen, Germany.]).
[Figure 2]
Figure 2
Crystal packing diagram, showing the intermolecular hydrogen-bonding interactions as dashed lines.
[Figure 3]
Figure 3
Crystal packing diagram, showing sheets stacking along [001], as viewed along [010]. Dashed lines indicate hydrogen bonds.
[Figure 4]
Figure 4
Crystal packing diagram showing sheets stacking along [001], as viewed along [100].

Experimental

All starting components were obtained from Sigma Aldrich Ltd. 3,5-Dinitrobenzoic acid (357 mg) and 0.5 equivalents of anthracene (150 mg) were heated to reflux in benzene (ca 50 ml). To dissolve the solids fully, a small quantity of DMSO (ca 2 ml) was added to the slurry. The resulting solution was allowed to cool and evaporate slowly over a period of 24 h. Crystals were observed before all the solvent had evaporated; a single crystal was harvested from this saturated solution for X-ray diffraction analysis.

Crystal data
  • C7H4N2O6·C2H6OS

  • Mr = 290.25

  • Orthorhombic, Pbca

  • a = 10.0156 (2) Å

  • b = 12.0767 (2) Å

  • c = 20.6483 (5) Å

  • V = 2497.52 (9) Å3

  • Z = 8

  • Dx = 1.544 Mg m-3

  • Mo K[alpha] radiation

  • Cell parameters from 11 611 reflections

  • [theta] = 1.0-27.5°

  • [mu] = 0.29 mm-1

  • T = 260 (2) K

  • Plate, yellow

  • 0.23 × 0.23 × 0.12 mm

Data collection
  • Nonius KappaCCD diffractometer

  • Thin-slice [omega] and [varphi] scans

  • Absorption correction: multi-scan (SORTAV; Blessing, 1995[Blessing, R. H. (1995). Acta Cryst. A51, 33-38.]) Tmin = 0.873, Tmax = 0.970

  • 16 897 measured reflections

  • 2856 independent reflections

  • 2114 reflections with I > 2[sigma](I)

  • Rint = 0.050

  • [theta]max = 27.5°

  • h = -12 [rightwards arrow] 13

  • k = -15 [rightwards arrow] 15

  • l = -26 [rightwards arrow] 26

Refinement
  • Refinement on F2

  • R[F2 > 2[sigma](F2)] = 0.045

  • wR(F2) = 0.134

  • S = 1.03

  • 2856 reflections

  • 178 parameters

  • H atoms treated by a mixture of independent and constrained refinement

  • w = 1/[[sigma]2(Fo2) + (0.0672P)2 + 1.1187P] where P = (Fo2 + 2Fc2)/3

  • ([Delta]/[sigma])max < 0.001

  • [Delta][rho]max = 0.60 e Å-3

  • [Delta][rho]min = -0.40 e Å-3

All H atoms bonded to C atoms were placed geometrically and refined using a riding model. The Uiso values for methyl H atoms were taken as 1.5Ueq of the carrier atom. For all other H atoms, Uiso(H) = 1.2Ueq(carrier atom). The C-H distances of the methyl groups were fixed at 0.96 Å; all other C-H distances were fixed at 0.93 Å. The O-H H atom was located from difference Fourier maps and fixed at an O-H bond distance of 1.00 Å.

Data collection: COLLECT (Nonius, 1998[Nonius (1998). COLLECT. Nonius BV, Delft, The Netherlands.]); cell refinement: SCALEPACK (Otwinowski & Minor, 1997[Otwinowski, Z. & Minor, W. (1997). Methods in Enzymology, Vol. 276, Macromolecular Crystallography, Part A, edited by C. W. Carter Jr & R. M. Sweet, pp. 307-326. New York: Academic Press.]); data reduction: SCALEPACK and DENZO (Otwinowski & Minor, 1997[Otwinowski, Z. & Minor, W. (1997). Methods in Enzymology, Vol. 276, Macromolecular Crystallography, Part A, edited by C. W. Carter Jr & R. M. Sweet, pp. 307-326. New York: Academic Press.]); program(s) used to solve structure: SIR92 (Altomare et al., 1994[Altomare, A., Cascarano, G., Giacovazzo, C., Guagliardi, A., Burla, M. C., Polidori, G. & Camalli, M. (1994). J. Appl. Cryst. 27, 435.]); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997[Sheldrick, G. M. (1997). SHELXS97 and SHELXL97. University of Göttingen, Germany.]); molecular graphics: XP (Sheldrick, 1993[Sheldrick, G. M. (1993). XP. University of Göttingen, Germany.]) and DIAMOND (Brandenburg, 1999[Brandenburg, K. (1999). DIAMOND. Version 2.1c. Crystal Impact GbR, Bonn, Germany.]); software used to prepare material for publication: SHELXL97.

Acknowledgements

We are grateful for funding from the Pfizer Institute for Pharmaceutical Materials Science (AVT and WJ). We thank Dr J. E. Davies for data collection and structure determination.

References

Allen, F. H. (2002). Acta Cryst. B58, 380-388. [CrossRef] [details]
Altomare, A., Cascarano, G., Giacovazzo, C., Guagliardi, A., Burla, M. C., Polidori, G. & Camalli, M. (1994). J. Appl. Cryst. 27, 435. [CrossRef] [details]
Blessing, R. H. (1995). Acta Cryst. A51, 33-38. [CrossRef] [details]
Brandenburg, K. (1999). DIAMOND. Version 2.1c. Crystal Impact GbR, Bonn, Germany.
Nonius (1998). COLLECT. Nonius BV, Delft, The Netherlands.
Otwinowski, Z. & Minor, W. (1997). Methods in Enzymology, Vol. 276, Macromolecular Crystallography, Part A, edited by C. W. Carter Jr & R. M. Sweet, pp. 307-326. New York: Academic Press.
Pedireddi, V. R., Jones, W., Chorlton, A. P. & Docherty, R. (1996). Chem. Commun. p. 987.
Prince, P., Fronczek, F. R. & Gandour, R. D. (1991). Acta Cryst. C47, 895-898. [CrossRef] [details]
Sheldrick, G. M. (1993). XP. University of Göttingen, Germany.
Sheldrick, G. M. (1997). SHELXS97 and SHELXL97. University of Göttingen, Germany.


Acta Cryst (2005). E61, o609-o611   [ doi:10.1107/S1600536805003818 ]