In the title polymeric complex, [HgI2(C7H6N2)]n, the HgII atom is coordinated by one benzimidazole (bzim) and three I− anions with a distorted tetrahedral geometry; one I− anion is in a monodentate coordination mode and the other two are bridging. The two bridging Hg—I bond distances differ significantly [2.7420 (7) and 3.0543 (7) Å]. The face-to-face separation of 3.31 (3) Å between the mean planes of parallel bzim ligands and the partially overlapped arrangement indicate the existence of π–π stacking.
Supporting information
CCDC reference: 285524
Key indicators
- Single-crystal X-ray study
- T = 295 K
- Mean (C-C) = 0.013 Å
- R factor = 0.033
- wR factor = 0.067
- Data-to-parameter ratio = 17.9
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT342_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 13
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
1 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
0 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
0 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: PROCESS-AUTO (Rigaku, 1998); cell refinement: PROCESS-AUTO; data reduction: Crystal Structure (Rigaku, 2002); program(s) used to solve structure: SIR92 (Altomare et al., 1993); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
catena-Poly[[(1
H-benzimidazole-
κN)iodomercury(II)]-µ-iodo]
top
Crystal data top
[HgI2(C7H6N2)] | F(000) = 992 |
Mr = 572.53 | Dx = 3.489 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71069 Å |
Hall symbol: -P 2yn | Cell parameters from 7029 reflections |
a = 4.4079 (4) Å | θ = 2.0–25.0° |
b = 13.3559 (11) Å | µ = 19.74 mm−1 |
c = 18.6196 (16) Å | T = 295 K |
β = 96.136 (12)° | Prism, yellow |
V = 1089.88 (16) Å3 | 0.12 × 0.08 × 0.06 mm |
Z = 4 | |
Data collection top
Rigaku R-AXIS RAPID diffractometer | 1955 independent reflections |
Radiation source: fine-focus sealed tube | 1768 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.031 |
Detector resolution: 10.00 pixels mm-1 | θmax = 25.2°, θmin = 1.9° |
ω scans | h = −5→4 |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | k = −16→16 |
Tmin = 0.095, Tmax = 0.298 | l = −22→22 |
7910 measured reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.033 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.067 | H-atom parameters constrained |
S = 1.20 | w = 1/[σ2(Fo2) + (0.0191P)2 + 7.8058P] where P = (Fo2 + 2Fc2)/3 |
1955 reflections | (Δ/σ)max = 0.001 |
109 parameters | Δρmax = 1.27 e Å−3 |
0 restraints | Δρmin = −1.41 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Hg | 0.68340 (9) | 0.31304 (3) | 0.624594 (19) | 0.04999 (13) | |
I1 | 0.56356 (15) | 0.14760 (4) | 0.69303 (3) | 0.05022 (17) | |
I2 | 0.14354 (12) | 0.45207 (4) | 0.63948 (3) | 0.04185 (15) | |
N1 | 0.4151 (17) | 0.3140 (5) | 0.3876 (4) | 0.0466 (18) | |
H1 | 0.3093 | 0.3373 | 0.3498 | 0.056* | |
N3 | 0.6027 (16) | 0.2985 (5) | 0.5016 (3) | 0.0405 (16) | |
C2 | 0.409 (2) | 0.3472 (7) | 0.4557 (5) | 0.046 (2) | |
H2 | 0.2830 | 0.3984 | 0.4688 | 0.055* | |
C4 | 0.952 (2) | 0.1537 (7) | 0.4823 (5) | 0.047 (2) | |
H4 | 1.0317 | 0.1460 | 0.5303 | 0.056* | |
C5 | 1.039 (2) | 0.0925 (7) | 0.4275 (6) | 0.056 (2) | |
H5 | 1.1810 | 0.0421 | 0.4393 | 0.067* | |
C6 | 0.920 (2) | 0.1041 (8) | 0.3562 (6) | 0.059 (3) | |
H6 | 0.9882 | 0.0625 | 0.3212 | 0.070* | |
C7 | 0.707 (2) | 0.1748 (7) | 0.3362 (5) | 0.052 (2) | |
H7 | 0.6236 | 0.1813 | 0.2884 | 0.062* | |
C8 | 0.6204 (19) | 0.2362 (7) | 0.3892 (4) | 0.0405 (19) | |
C9 | 0.7379 (18) | 0.2275 (6) | 0.4602 (4) | 0.0375 (18) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Hg | 0.0642 (3) | 0.0485 (2) | 0.0374 (2) | −0.00778 (18) | 0.00582 (17) | 0.00346 (15) |
I1 | 0.0567 (4) | 0.0430 (3) | 0.0512 (4) | −0.0052 (3) | 0.0066 (3) | 0.0057 (3) |
I2 | 0.0374 (3) | 0.0370 (3) | 0.0510 (3) | 0.0009 (2) | 0.0040 (3) | 0.0012 (2) |
N1 | 0.052 (4) | 0.051 (5) | 0.034 (4) | −0.001 (4) | −0.008 (3) | 0.011 (3) |
N3 | 0.051 (4) | 0.042 (4) | 0.027 (3) | −0.008 (3) | −0.004 (3) | −0.001 (3) |
C2 | 0.053 (5) | 0.040 (5) | 0.042 (5) | −0.001 (4) | −0.003 (4) | 0.006 (4) |
C4 | 0.047 (5) | 0.049 (5) | 0.044 (5) | −0.008 (4) | 0.004 (4) | 0.005 (4) |
C5 | 0.054 (6) | 0.050 (6) | 0.067 (7) | 0.000 (5) | 0.017 (5) | 0.007 (5) |
C6 | 0.067 (7) | 0.055 (6) | 0.056 (6) | −0.018 (5) | 0.017 (5) | −0.007 (5) |
C7 | 0.062 (6) | 0.063 (6) | 0.032 (5) | −0.017 (5) | 0.010 (5) | 0.000 (4) |
C8 | 0.040 (5) | 0.049 (5) | 0.031 (4) | −0.011 (4) | −0.001 (4) | 0.004 (4) |
C9 | 0.035 (4) | 0.037 (4) | 0.039 (4) | −0.009 (4) | −0.002 (4) | 0.006 (4) |
Geometric parameters (Å, º) top
Hg—I1 | 2.6322 (7) | C4—C5 | 1.392 (13) |
Hg—I2i | 2.7420 (7) | C4—C9 | 1.396 (12) |
Hg—I2 | 3.0543 (7) | C4—H4 | 0.9300 |
I2—Hgii | 2.7420 (7) | C5—C6 | 1.382 (14) |
Hg—N3 | 2.289 (6) | C5—H5 | 0.9300 |
N1—C2 | 1.347 (11) | C6—C7 | 1.355 (14) |
N1—C8 | 1.376 (11) | C6—H6 | 0.9300 |
N1—H1 | 0.8600 | C7—C8 | 1.369 (12) |
N3—C2 | 1.313 (11) | C7—H7 | 0.9300 |
N3—C9 | 1.395 (11) | C8—C9 | 1.372 (11) |
C2—H2 | 0.9300 | | |
| | | |
I1—Hg—I2 | 105.53 (2) | C5—C4—H4 | 122.3 |
I1—Hg—I2i | 134.76 (2) | C9—C4—H4 | 122.3 |
I1—Hg—N3 | 113.29 (17) | C6—C5—C4 | 122.2 (10) |
I2—Hg—N3 | 95.93 (18) | C6—C5—H5 | 118.9 |
N3—Hg—I2i | 101.12 (17) | C4—C5—H5 | 118.9 |
I2i—Hg—I2 | 98.87 (2) | C7—C6—C5 | 121.5 (10) |
Hgii—I2—Hg | 98.87 (2) | C7—C6—H6 | 119.3 |
C2—N1—C8 | 107.9 (7) | C5—C6—H6 | 119.3 |
C2—N1—H1 | 126.1 | C6—C7—C8 | 117.2 (9) |
C8—N1—H1 | 126.1 | C6—C7—H7 | 121.4 |
C2—N3—C9 | 105.3 (7) | C8—C7—H7 | 121.4 |
C2—N3—Hg | 129.0 (6) | C7—C8—C9 | 122.5 (9) |
C9—N3—Hg | 125.5 (5) | C7—C8—N1 | 132.2 (8) |
N3—C2—N1 | 111.8 (8) | C9—C8—N1 | 105.3 (7) |
N3—C2—H2 | 124.1 | C8—C9—N3 | 109.6 (7) |
N1—C2—H2 | 124.1 | C8—C9—C4 | 121.2 (8) |
C5—C4—C9 | 115.4 (8) | N3—C9—C4 | 129.2 (8) |
Symmetry codes: (i) x+1, y, z; (ii) x−1, y, z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···I1iii | 0.86 | 3.01 | 3.820 (7) | 158 |
Symmetry code: (iii) x−1/2, −y+1/2, z−1/2. |