In the title compound, C
35H
31N
3O
2, the dihedral angle between the two indole groups is 76.4 (1)°. The molecular structure is stabilized by an intramolecular π–π interaction. The molecular packing in the crystal structure is stabilized by strong N—H
O hydrogen bonds and weak N—H
π interactions.
Supporting information
CCDC reference: 287482
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.002 Å
- R factor = 0.049
- wR factor = 0.148
- Data-to-parameter ratio = 18.0
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT199_ALERT_1_C Check the Reported _cell_measurement_temperature 293 K
PLAT200_ALERT_1_C Check the Reported _diffrn_ambient_temperature . 293 K
PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.25 Ratio
PLAT222_ALERT_3_C Large Non-Solvent H Ueq(max)/Ueq(min) ... 3.18 Ratio
PLAT230_ALERT_2_C Hirshfeld Test Diff for C33 - C34 .. 6.39 su
PLAT230_ALERT_2_C Hirshfeld Test Diff for C34 - C35 .. 5.83 su
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
6 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
3 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
0 ALERT type 4 Improvement, methodology, query or suggestion
A mixture of 2-methylindole (2.5 mmol), 4-formylazetidinone (1.25 mmol) and gadolinium trifluoromethanesulfonate (55 mg, 0.093 mmol) was stirred in acetonitrile (6 ml). After completion of the reaction, water was added to quench the reaction and the product was extracted with ethyl acetate (3 × 10 ml) and washed with an aqueous sodium bicarbonate and sodium chloride solution; the combined organic layers were dried using anhydrous Na2SO4 and filtered. The solvent was then evaporated. The crude product was purified by column chromatography and eluted with an ethyl acetate and hexane (3:1 (v/v) mixture to afford the title compound. To obtain diffraction quality crystals, recrystallization was carried out from an ethyl acetate–hexane (1:1 (v/v) mixture.
The H atoms were positioned geometrically and were treated as riding on their parent atoms, with C—H distances of 0.93–0.98 Å, N—H distances of 0.86 Å and with Uiso(H) = 1.5Ueq(C) for methyl H atoms and 1.2Ueq(C or N) for the other H atoms. Methyl atom C29 was allowed to rotate but not to tip.
Data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: 'ORTEP-3 (Farrugia, 1997) and PLATON (Spek, 2003)'; software used to prepare material for publication: SHELXL97 and PARST (Nardelli, 1995).
4-[Bis(2-methyl-1
H-indol-3-yl)methyl]-1-(4-methoxyphenyl)-3-phenylazetidin- 2-one
top
Crystal data top
C35H31N3O2 | F(000) = 1112 |
Mr = 525.63 | Dx = 1.257 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 11212 reflections |
a = 11.9751 (7) Å | θ = 2.2–23.4° |
b = 13.4815 (8) Å | µ = 0.08 mm−1 |
c = 17.2114 (11) Å | T = 293 K |
β = 91.978 (1)° | Block, colourless |
V = 2777.0 (3) Å3 | 0.26 × 0.22 × 0.20 mm |
Z = 4 | |
Data collection top
CCD area-detector diffractometer | 5325 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.020 |
Graphite monochromator | θmax = 28.0°, θmin = 1.9° |
ω scans | h = −15→15 |
31001 measured reflections | k = −17→17 |
6519 independent reflections | l = −22→22 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.049 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.149 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.08P)2 + 0.5932P] where P = (Fo2 + 2Fc2)/3 |
6519 reflections | (Δ/σ)max < 0.001 |
362 parameters | Δρmax = 0.30 e Å−3 |
0 restraints | Δρmin = −0.22 e Å−3 |
Crystal data top
C35H31N3O2 | V = 2777.0 (3) Å3 |
Mr = 525.63 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 11.9751 (7) Å | µ = 0.08 mm−1 |
b = 13.4815 (8) Å | T = 293 K |
c = 17.2114 (11) Å | 0.26 × 0.22 × 0.20 mm |
β = 91.978 (1)° | |
Data collection top
CCD area-detector diffractometer | 5325 reflections with I > 2σ(I) |
31001 measured reflections | Rint = 0.020 |
6519 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.049 | 0 restraints |
wR(F2) = 0.149 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.30 e Å−3 |
6519 reflections | Δρmin = −0.22 e Å−3 |
362 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.59029 (9) | 0.23703 (8) | 0.11658 (6) | 0.0554 (3) | |
O2 | 0.68659 (10) | −0.21135 (9) | −0.03740 (7) | 0.0632 (3) | |
N1 | 0.54200 (10) | 0.07997 (9) | 0.16433 (6) | 0.0429 (3) | |
N2 | 0.71139 (11) | −0.15471 (11) | 0.33046 (8) | 0.0584 (3) | |
H2 | 0.7783 | −0.1776 | 0.3354 | 0.070* | |
N3 | 0.36215 (11) | 0.11854 (9) | 0.48359 (7) | 0.0509 (3) | |
H3 | 0.3620 | 0.1420 | 0.5300 | 0.061* | |
C1 | 0.45976 (11) | 0.07649 (10) | 0.22669 (7) | 0.0392 (3) | |
H1 | 0.3931 | 0.0375 | 0.2124 | 0.047* | |
C2 | 0.44312 (11) | 0.19115 (10) | 0.21277 (8) | 0.0435 (3) | |
H2A | 0.3727 | 0.2020 | 0.1832 | 0.052* | |
C3 | 0.53734 (11) | 0.18046 (10) | 0.15643 (7) | 0.0435 (3) | |
C4 | 0.58073 (11) | 0.00436 (11) | 0.11538 (7) | 0.0432 (3) | |
C5 | 0.54765 (14) | −0.09251 (11) | 0.12555 (8) | 0.0528 (4) | |
H5 | 0.5024 | −0.1083 | 0.1666 | 0.063* | |
C6 | 0.58059 (14) | −0.16690 (12) | 0.07578 (8) | 0.0543 (4) | |
H6 | 0.5572 | −0.2319 | 0.0833 | 0.065* | |
C7 | 0.64828 (12) | −0.14412 (12) | 0.01494 (8) | 0.0486 (3) | |
C8 | 0.68095 (14) | −0.04706 (13) | 0.00443 (9) | 0.0559 (4) | |
H8 | 0.7261 | −0.0316 | −0.0368 | 0.067* | |
C9 | 0.64835 (13) | 0.02742 (12) | 0.05349 (8) | 0.0511 (3) | |
H9 | 0.6712 | 0.0924 | 0.0454 | 0.061* | |
C10 | 0.65488 (16) | −0.31203 (13) | −0.02868 (10) | 0.0618 (4) | |
H10A | 0.6871 | −0.3511 | −0.0688 | 0.093* | |
H10B | 0.5749 | −0.3173 | −0.0326 | 0.093* | |
H10C | 0.6812 | −0.3358 | 0.0212 | 0.093* | |
C11 | 0.50927 (10) | 0.05056 (9) | 0.30724 (7) | 0.0372 (3) | |
H11 | 0.5671 | 0.1008 | 0.3176 | 0.045* | |
C12 | 0.56971 (11) | −0.04732 (10) | 0.31413 (7) | 0.0398 (3) | |
C13 | 0.68380 (12) | −0.05656 (12) | 0.31915 (8) | 0.0498 (3) | |
C14 | 0.61568 (13) | −0.21048 (11) | 0.33260 (8) | 0.0497 (3) | |
C15 | 0.60232 (17) | −0.31206 (13) | 0.34411 (10) | 0.0660 (5) | |
H15 | 0.6636 | −0.3537 | 0.3520 | 0.079* | |
C16 | 0.49572 (19) | −0.34809 (13) | 0.34338 (12) | 0.0736 (5) | |
H16 | 0.4843 | −0.4157 | 0.3504 | 0.088* | |
C17 | 0.40370 (16) | −0.28600 (13) | 0.33237 (11) | 0.0655 (4) | |
H17 | 0.3322 | −0.3129 | 0.3324 | 0.079* | |
C18 | 0.41653 (13) | −0.18540 (11) | 0.32138 (9) | 0.0497 (3) | |
H18 | 0.3544 | −0.1447 | 0.3136 | 0.060* | |
C19 | 0.52436 (11) | −0.14537 (10) | 0.32206 (7) | 0.0410 (3) | |
C20 | 0.77400 (14) | 0.01888 (17) | 0.31435 (13) | 0.0749 (5) | |
H20A | 0.8454 | −0.0130 | 0.3208 | 0.112* | |
H20B | 0.7659 | 0.0673 | 0.3546 | 0.112* | |
H20C | 0.7689 | 0.0510 | 0.2646 | 0.112* | |
C21 | 0.42471 (11) | 0.06678 (9) | 0.36965 (7) | 0.0366 (3) | |
C22 | 0.45547 (12) | 0.10554 (10) | 0.44083 (8) | 0.0429 (3) | |
C23 | 0.26937 (12) | 0.08868 (11) | 0.44159 (8) | 0.0471 (3) | |
C24 | 0.15778 (15) | 0.08975 (14) | 0.46154 (10) | 0.0624 (4) | |
H24 | 0.1367 | 0.1130 | 0.5097 | 0.075* | |
C25 | 0.07993 (14) | 0.05536 (15) | 0.40781 (11) | 0.0672 (5) | |
H25 | 0.0048 | 0.0549 | 0.4198 | 0.081* | |
C26 | 0.11188 (13) | 0.02097 (14) | 0.33533 (10) | 0.0590 (4) | |
H26 | 0.0576 | −0.0023 | 0.2999 | 0.071* | |
C27 | 0.22223 (12) | 0.02095 (11) | 0.31529 (8) | 0.0462 (3) | |
H27 | 0.2418 | −0.0017 | 0.2666 | 0.055* | |
C28 | 0.30526 (11) | 0.05503 (9) | 0.36841 (7) | 0.0392 (3) | |
C29 | 0.56762 (14) | 0.13309 (12) | 0.47331 (9) | 0.0550 (4) | |
H29A | 0.5955 | 0.0809 | 0.5066 | 0.082* | |
H29B | 0.5622 | 0.1933 | 0.5027 | 0.082* | |
H29C | 0.6177 | 0.1428 | 0.4316 | 0.082* | |
C30 | 0.45151 (15) | 0.26413 (10) | 0.27847 (9) | 0.0537 (4) | |
C31 | 0.3540 (2) | 0.29040 (13) | 0.31582 (11) | 0.0742 (5) | |
H31 | 0.2854 | 0.2663 | 0.2973 | 0.089* | |
C32 | 0.3587 (3) | 0.35138 (18) | 0.37954 (15) | 0.1077 (10) | |
H32 | 0.2936 | 0.3672 | 0.4046 | 0.129* | |
C33 | 0.4580 (4) | 0.38870 (18) | 0.40616 (15) | 0.1189 (12) | |
H33 | 0.4604 | 0.4294 | 0.4498 | 0.143* | |
C34 | 0.5571 (3) | 0.36657 (16) | 0.36862 (15) | 0.1045 (10) | |
H34 | 0.6248 | 0.3937 | 0.3862 | 0.125* | |
C35 | 0.5523 (2) | 0.30309 (13) | 0.30442 (11) | 0.0711 (5) | |
H35 | 0.6173 | 0.2871 | 0.2792 | 0.085* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0586 (6) | 0.0538 (6) | 0.0539 (6) | −0.0159 (5) | 0.0054 (5) | 0.0109 (5) |
O2 | 0.0743 (8) | 0.0664 (7) | 0.0499 (6) | −0.0029 (6) | 0.0176 (5) | −0.0118 (5) |
N1 | 0.0491 (6) | 0.0456 (6) | 0.0346 (5) | −0.0074 (5) | 0.0076 (4) | 0.0017 (4) |
N2 | 0.0457 (7) | 0.0695 (9) | 0.0599 (8) | 0.0184 (6) | 0.0030 (6) | −0.0039 (6) |
N3 | 0.0646 (8) | 0.0544 (7) | 0.0339 (5) | 0.0040 (6) | 0.0066 (5) | −0.0075 (5) |
C1 | 0.0410 (6) | 0.0433 (7) | 0.0334 (6) | −0.0056 (5) | 0.0042 (5) | 0.0001 (5) |
C2 | 0.0452 (7) | 0.0460 (7) | 0.0390 (6) | −0.0002 (5) | −0.0013 (5) | 0.0056 (5) |
C3 | 0.0451 (7) | 0.0476 (7) | 0.0374 (6) | −0.0077 (5) | −0.0033 (5) | 0.0037 (5) |
C4 | 0.0463 (7) | 0.0508 (7) | 0.0326 (6) | −0.0051 (6) | 0.0028 (5) | −0.0012 (5) |
C5 | 0.0666 (9) | 0.0529 (8) | 0.0398 (7) | −0.0098 (7) | 0.0159 (6) | −0.0005 (6) |
C6 | 0.0719 (10) | 0.0493 (8) | 0.0422 (7) | −0.0085 (7) | 0.0112 (7) | −0.0018 (6) |
C7 | 0.0513 (8) | 0.0587 (8) | 0.0360 (6) | −0.0017 (6) | 0.0033 (5) | −0.0049 (6) |
C8 | 0.0604 (9) | 0.0660 (10) | 0.0424 (7) | −0.0109 (7) | 0.0175 (6) | −0.0015 (7) |
C9 | 0.0558 (8) | 0.0548 (8) | 0.0433 (7) | −0.0134 (6) | 0.0112 (6) | 0.0009 (6) |
C10 | 0.0690 (10) | 0.0583 (9) | 0.0581 (9) | 0.0105 (8) | 0.0022 (8) | −0.0078 (7) |
C11 | 0.0396 (6) | 0.0382 (6) | 0.0339 (6) | −0.0028 (5) | 0.0026 (5) | −0.0001 (5) |
C12 | 0.0412 (6) | 0.0451 (7) | 0.0333 (6) | 0.0023 (5) | 0.0045 (5) | −0.0011 (5) |
C13 | 0.0434 (7) | 0.0618 (9) | 0.0444 (7) | 0.0045 (6) | 0.0058 (6) | −0.0020 (6) |
C14 | 0.0560 (8) | 0.0530 (8) | 0.0401 (7) | 0.0144 (6) | 0.0027 (6) | −0.0047 (6) |
C15 | 0.0852 (12) | 0.0510 (9) | 0.0614 (10) | 0.0248 (8) | −0.0036 (9) | −0.0035 (7) |
C16 | 0.1003 (15) | 0.0410 (8) | 0.0791 (12) | 0.0051 (9) | −0.0032 (10) | 0.0009 (8) |
C17 | 0.0719 (11) | 0.0490 (9) | 0.0757 (11) | −0.0075 (8) | 0.0027 (9) | −0.0020 (8) |
C18 | 0.0515 (8) | 0.0434 (7) | 0.0541 (8) | 0.0012 (6) | 0.0027 (6) | −0.0020 (6) |
C19 | 0.0491 (7) | 0.0421 (7) | 0.0320 (6) | 0.0068 (5) | 0.0044 (5) | −0.0018 (5) |
C20 | 0.0434 (8) | 0.0929 (14) | 0.0890 (13) | −0.0078 (9) | 0.0096 (8) | 0.0001 (11) |
C21 | 0.0434 (6) | 0.0340 (6) | 0.0325 (6) | 0.0017 (5) | 0.0021 (5) | 0.0018 (4) |
C22 | 0.0537 (7) | 0.0398 (6) | 0.0352 (6) | 0.0014 (5) | 0.0011 (5) | 0.0013 (5) |
C23 | 0.0544 (8) | 0.0449 (7) | 0.0424 (7) | 0.0066 (6) | 0.0088 (6) | −0.0005 (5) |
C24 | 0.0619 (9) | 0.0698 (10) | 0.0566 (9) | 0.0108 (8) | 0.0199 (8) | −0.0047 (8) |
C25 | 0.0451 (8) | 0.0845 (12) | 0.0728 (11) | 0.0091 (8) | 0.0161 (8) | 0.0003 (9) |
C26 | 0.0449 (8) | 0.0701 (10) | 0.0620 (9) | 0.0010 (7) | −0.0005 (7) | 0.0032 (8) |
C27 | 0.0455 (7) | 0.0510 (8) | 0.0420 (7) | 0.0022 (6) | 0.0029 (5) | 0.0011 (6) |
C28 | 0.0448 (7) | 0.0357 (6) | 0.0374 (6) | 0.0052 (5) | 0.0050 (5) | 0.0026 (5) |
C29 | 0.0645 (9) | 0.0580 (9) | 0.0418 (7) | −0.0074 (7) | −0.0082 (6) | −0.0011 (6) |
C30 | 0.0800 (11) | 0.0371 (7) | 0.0439 (7) | 0.0055 (7) | 0.0008 (7) | 0.0069 (6) |
C31 | 0.1076 (15) | 0.0491 (9) | 0.0669 (11) | 0.0260 (9) | 0.0176 (10) | 0.0048 (8) |
C32 | 0.185 (3) | 0.0570 (12) | 0.0825 (16) | 0.0354 (16) | 0.0302 (18) | −0.0079 (11) |
C33 | 0.238 (4) | 0.0519 (12) | 0.0673 (14) | 0.0141 (18) | 0.010 (2) | −0.0150 (10) |
C34 | 0.181 (3) | 0.0516 (11) | 0.0785 (15) | −0.0239 (14) | −0.0380 (17) | 0.0029 (10) |
C35 | 0.1068 (15) | 0.0486 (9) | 0.0566 (9) | −0.0134 (9) | −0.0135 (9) | 0.0042 (7) |
Geometric parameters (Å, º) top
O1—C3 | 1.218 (2) | C15—C16 | 1.366 (3) |
O2—C7 | 1.3681 (18) | C15—H15 | 0.9300 |
O2—C10 | 1.419 (2) | C16—C17 | 1.391 (3) |
N1—C3 | 1.363 (2) | C16—H16 | 0.9300 |
N1—C4 | 1.411 (2) | C17—C18 | 1.379 (2) |
N1—C1 | 1.482 (2) | C17—H17 | 0.9300 |
N2—C14 | 1.372 (2) | C18—C19 | 1.399 (2) |
N2—C13 | 1.376 (2) | C18—H18 | 0.9300 |
N2—H2 | 0.8600 | C20—H20A | 0.9600 |
N3—C23 | 1.365 (2) | C20—H20B | 0.9600 |
N3—C22 | 1.371 (2) | C20—H20C | 0.9600 |
N3—H3 | 0.8600 | C21—C22 | 1.3706 (18) |
C1—C11 | 1.5293 (17) | C21—C28 | 1.4387 (18) |
C1—C2 | 1.5758 (18) | C22—C29 | 1.484 (2) |
C1—H1 | 0.9800 | C23—C24 | 1.391 (2) |
C2—C30 | 1.500 (2) | C23—C28 | 1.4192 (18) |
C2—C3 | 1.5197 (19) | C24—C25 | 1.371 (3) |
C2—H2A | 0.9800 | C24—H24 | 0.9300 |
C4—C5 | 1.378 (2) | C25—C26 | 1.397 (3) |
C4—C9 | 1.3951 (18) | C25—H25 | 0.9300 |
C5—C6 | 1.385 (2) | C26—C27 | 1.377 (2) |
C5—H5 | 0.9300 | C26—H26 | 0.9300 |
C6—C7 | 1.381 (2) | C27—C28 | 1.404 (2) |
C6—H6 | 0.9300 | C27—H27 | 0.9300 |
C7—C8 | 1.379 (2) | C29—H29A | 0.9600 |
C8—C9 | 1.377 (2) | C29—H29B | 0.9600 |
C8—H8 | 0.9300 | C29—H29C | 0.9600 |
C9—H9 | 0.9300 | C30—C35 | 1.376 (3) |
C10—H10A | 0.9600 | C30—C31 | 1.398 (3) |
C10—H10B | 0.9600 | C31—C32 | 1.370 (3) |
C10—H10C | 0.9600 | C31—H31 | 0.9300 |
C11—C12 | 1.5078 (18) | C32—C33 | 1.356 (5) |
C11—C21 | 1.5172 (17) | C32—H32 | 0.9300 |
C11—H11 | 0.9800 | C33—C34 | 1.403 (5) |
C12—C13 | 1.372 (2) | C33—H33 | 0.9300 |
C12—C19 | 1.4373 (19) | C34—C35 | 1.397 (3) |
C13—C20 | 1.488 (2) | C34—H34 | 0.9300 |
C14—C15 | 1.394 (2) | C35—H35 | 0.9300 |
C14—C19 | 1.4091 (19) | | |
| | | |
C7—O2—C10 | 117.85 (12) | C15—C16—C17 | 121.53 (16) |
C3—N1—C4 | 132.2 (1) | C15—C16—H16 | 119.2 |
C3—N1—C1 | 94.5 (1) | C17—C16—H16 | 119.2 |
C4—N1—C1 | 130.5 (1) | C18—C17—C16 | 121.26 (17) |
C14—N2—C13 | 109.51 (12) | C18—C17—H17 | 119.4 |
C14—N2—H2 | 125.2 | C16—C17—H17 | 119.4 |
C13—N2—H2 | 125.2 | C17—C18—C19 | 119.04 (14) |
C23—N3—C22 | 109.99 (11) | C17—C18—H18 | 120.5 |
C23—N3—H3 | 125.0 | C19—C18—H18 | 120.5 |
C22—N3—H3 | 125.0 | C18—C19—C14 | 118.21 (13) |
N1—C1—C11 | 114.66 (11) | C18—C19—C12 | 134.87 (12) |
N1—C1—C2 | 86.71 (9) | C14—C19—C12 | 106.92 (12) |
C11—C1—C2 | 113.90 (10) | C13—C20—H20A | 109.5 |
N1—C1—H1 | 113.0 | C13—C20—H20B | 109.5 |
C11—C1—H1 | 113.0 | H20A—C20—H20B | 109.5 |
C2—C1—H1 | 113.0 | C13—C20—H20C | 109.5 |
C30—C2—C3 | 120.76 (12) | H20A—C20—H20C | 109.5 |
C30—C2—C1 | 121.61 (11) | H20B—C20—H20C | 109.5 |
C3—C2—C1 | 84.91 (10) | C22—C21—C28 | 106.96 (11) |
C30—C2—H2A | 109.1 | C22—C21—C11 | 121.50 (12) |
C3—C2—H2A | 109.1 | C28—C21—C11 | 131.39 (11) |
C1—C2—H2A | 109.1 | N3—C22—C21 | 109.26 (12) |
O1—C3—N1 | 131.17 (14) | N3—C22—C29 | 120.66 (13) |
O1—C3—C2 | 135.41 (14) | C21—C22—C29 | 130.09 (13) |
N1—C3—C2 | 93.41 (10) | N3—C23—C24 | 129.60 (14) |
C5—C4—C9 | 119.03 (13) | N3—C23—C28 | 107.36 (12) |
C5—C4—N1 | 120.46 (12) | C24—C23—C28 | 123.03 (15) |
C9—C4—N1 | 120.42 (13) | C25—C24—C23 | 117.82 (15) |
C4—C5—C6 | 121.23 (13) | C25—C24—H24 | 121.1 |
C4—C5—H5 | 119.4 | C23—C24—H24 | 121.1 |
C6—C5—H5 | 119.4 | C24—C25—C26 | 120.92 (15) |
C7—C6—C5 | 119.68 (14) | C24—C25—H25 | 119.5 |
C7—C6—H6 | 120.2 | C26—C25—H25 | 119.5 |
C5—C6—H6 | 120.2 | C27—C26—C25 | 121.23 (16) |
O2—C7—C8 | 116.0 (1) | C27—C26—H26 | 119.4 |
O2—C7—C6 | 124.8 (1) | C25—C26—H26 | 119.4 |
C8—C7—C6 | 119.14 (13) | C26—C27—C28 | 120.05 (14) |
C9—C8—C7 | 121.57 (13) | C26—C27—H27 | 120.0 |
C9—C8—H8 | 119.2 | C28—C27—H27 | 120.0 |
C7—C8—H8 | 119.2 | C27—C28—C23 | 116.94 (12) |
C8—C9—C4 | 119.34 (14) | C27—C28—C21 | 136.62 (12) |
C8—C9—H9 | 120.3 | C23—C28—C21 | 106.44 (12) |
C4—C9—H9 | 120.3 | C22—C29—H29A | 109.5 |
O2—C10—H10A | 109.5 | C22—C29—H29B | 109.5 |
O2—C10—H10B | 109.5 | H29A—C29—H29B | 109.5 |
H10A—C10—H10B | 109.5 | C22—C29—H29C | 109.5 |
O2—C10—H10C | 109.5 | H29A—C29—H29C | 109.5 |
H10A—C10—H10C | 109.5 | H29B—C29—H29C | 109.5 |
H10B—C10—H10C | 109.5 | C35—C30—C31 | 119.41 (18) |
C12—C11—C21 | 113.6 (1) | C35—C30—C2 | 122.02 (16) |
C12—C11—C1 | 116.2 (1) | C31—C30—C2 | 118.53 (16) |
C21—C11—C1 | 111.2 (1) | C32—C31—C30 | 120.5 (3) |
C12—C11—H11 | 104.8 | C32—C31—H31 | 119.7 |
C21—C11—H11 | 104.8 | C30—C31—H31 | 119.7 |
C1—C11—H11 | 104.8 | C33—C32—C31 | 120.3 (3) |
C13—C12—C19 | 106.82 (12) | C33—C32—H32 | 119.8 |
C13—C12—C11 | 123.97 (12) | C31—C32—H32 | 119.8 |
C19—C12—C11 | 129.09 (11) | C32—C33—C34 | 120.7 (2) |
C12—C13—N2 | 109.27 (13) | C32—C33—H33 | 119.6 |
C12—C13—C20 | 131.14 (15) | C34—C33—H33 | 119.6 |
N2—C13—C20 | 119.60 (14) | C35—C34—C33 | 118.8 (3) |
N2—C14—C15 | 129.96 (15) | C35—C34—H34 | 120.6 |
N2—C14—C19 | 107.48 (13) | C33—C34—H34 | 120.6 |
C15—C14—C19 | 122.55 (15) | C30—C35—C34 | 120.1 (2) |
C16—C15—C14 | 117.39 (16) | C30—C35—H35 | 119.9 |
C16—C15—H15 | 121.3 | C34—C35—H35 | 119.9 |
C14—C15—H15 | 121.3 | | |
| | | |
C3—N1—C1—C11 | −109.24 (12) | C15—C16—C17—C18 | 0.3 (3) |
C4—N1—C1—C11 | 88.33 (16) | C16—C17—C18—C19 | −0.6 (3) |
C3—N1—C1—C2 | 5.60 (10) | C17—C18—C19—C14 | 1.2 (2) |
C4—N1—C1—C2 | −156.83 (14) | C17—C18—C19—C12 | −178.88 (15) |
N1—C1—C2—C30 | −128.26 (14) | N2—C14—C19—C18 | 179.47 (12) |
C11—C1—C2—C30 | −12.69 (18) | C15—C14—C19—C18 | −1.6 (2) |
N1—C1—C2—C3 | −5.02 (9) | N2—C14—C19—C12 | −0.51 (15) |
C11—C1—C2—C3 | 110.54 (11) | C15—C14—C19—C12 | 178.48 (14) |
C4—N1—C3—O1 | −22.7 (3) | C13—C12—C19—C18 | −179.32 (15) |
C1—N1—C3—O1 | 175.37 (15) | C11—C12—C19—C18 | 4.7 (2) |
C4—N1—C3—C2 | 156.14 (14) | C13—C12—C19—C14 | 0.65 (14) |
C1—N1—C3—C2 | −5.81 (10) | C11—C12—C19—C14 | −175.30 (12) |
C30—C2—C3—O1 | −51.8 (2) | C12—C11—C21—C22 | 85.63 (15) |
C1—C2—C3—O1 | −175.80 (16) | C1—C11—C21—C22 | −141.03 (12) |
C30—C2—C3—N1 | 129.47 (13) | C12—C11—C21—C28 | −99.56 (15) |
C1—C2—C3—N1 | 5.47 (10) | C1—C11—C21—C28 | 33.78 (18) |
C3—N1—C4—C5 | −161.00 (15) | C23—N3—C22—C21 | 0.07 (16) |
C1—N1—C4—C5 | −5.0 (2) | C23—N3—C22—C29 | 179.60 (13) |
C3—N1—C4—C9 | 15.6 (2) | C28—C21—C22—N3 | −0.07 (15) |
C1—N1—C4—C9 | 171.65 (13) | C11—C21—C22—N3 | 175.86 (11) |
C9—C4—C5—C6 | 0.2 (2) | C28—C21—C22—C29 | −179.54 (14) |
N1—C4—C5—C6 | 176.91 (14) | C11—C21—C22—C29 | −3.6 (2) |
C4—C5—C6—C7 | 0.3 (3) | C22—N3—C23—C24 | −179.13 (16) |
C10—O2—C7—C8 | −180.0 (2) | C22—N3—C23—C28 | −0.04 (16) |
C10—O2—C7—C6 | −0.1 (2) | N3—C23—C24—C25 | 179.78 (17) |
C5—C6—C7—O2 | 179.51 (15) | C28—C23—C24—C25 | 0.8 (3) |
C5—C6—C7—C8 | −0.7 (2) | C23—C24—C25—C26 | −0.4 (3) |
O2—C7—C8—C9 | −179.67 (15) | C24—C25—C26—C27 | −0.4 (3) |
C6—C7—C8—C9 | 0.5 (2) | C25—C26—C27—C28 | 0.6 (2) |
C7—C8—C9—C4 | 0.0 (3) | C26—C27—C28—C23 | −0.2 (2) |
C5—C4—C9—C8 | −0.4 (2) | C26—C27—C28—C21 | −179.77 (15) |
N1—C4—C9—C8 | −177.09 (14) | N3—C23—C28—C27 | −179.72 (12) |
N1—C1—C11—C12 | −58.29 (15) | C24—C23—C28—C27 | −0.6 (2) |
C2—C1—C11—C12 | −156.0 (1) | N3—C23—C28—C21 | 0.00 (15) |
N1—C1—C11—C21 | 169.66 (10) | C24—C23—C28—C21 | 179.16 (14) |
C2—C1—C11—C21 | 72.0 (1) | C22—C21—C28—C27 | 179.68 (15) |
C21—C11—C12—C13 | −124.66 (14) | C11—C21—C28—C27 | 4.3 (2) |
C1—C11—C12—C13 | 104.42 (15) | C22—C21—C28—C23 | 0.04 (14) |
C21—C11—C12—C19 | 50.66 (17) | C11—C21—C28—C23 | −175.32 (12) |
C1—C11—C12—C19 | −80.25 (16) | C3—C2—C30—C35 | −18.8 (2) |
C19—C12—C13—N2 | −0.55 (15) | C1—C2—C30—C35 | 85.41 (18) |
C11—C12—C13—N2 | 175.66 (12) | C3—C2—C30—C31 | 163.41 (13) |
C19—C12—C13—C20 | 179.39 (17) | C1—C2—C30—C31 | −92.41 (17) |
C11—C12—C13—C20 | −4.4 (3) | C35—C30—C31—C32 | −2.5 (3) |
C14—N2—C13—C12 | 0.24 (17) | C2—C30—C31—C32 | 175.42 (17) |
C14—N2—C13—C20 | −179.71 (15) | C30—C31—C32—C33 | 1.4 (3) |
C13—N2—C14—C15 | −178.70 (16) | C31—C32—C33—C34 | 0.7 (4) |
C13—N2—C14—C19 | 0.18 (16) | C32—C33—C34—C35 | −1.7 (4) |
N2—C14—C15—C16 | −179.99 (17) | C31—C30—C35—C34 | 1.4 (2) |
C19—C14—C15—C16 | 1.3 (2) | C2—C30—C35—C34 | −176.39 (16) |
C14—C15—C16—C17 | −0.6 (3) | C33—C34—C35—C30 | 0.6 (3) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O1i | 0.86 | 2.10 | 2.907 (2) | 157 |
Symmetry code: (i) −x+3/2, y−1/2, −z+1/2. |
Experimental details
Crystal data |
Chemical formula | C35H31N3O2 |
Mr | 525.63 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 293 |
a, b, c (Å) | 11.9751 (7), 13.4815 (8), 17.2114 (11) |
β (°) | 91.978 (1) |
V (Å3) | 2777.0 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.26 × 0.22 × 0.20 |
|
Data collection |
Diffractometer | CCD area-detector diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 31001, 6519, 5325 |
Rint | 0.020 |
(sin θ/λ)max (Å−1) | 0.661 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.049, 0.149, 1.05 |
No. of reflections | 6519 |
No. of parameters | 362 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.30, −0.22 |
Selected geometric parameters (Å, º) topO1—C3 | 1.218 (2) | N2—C14 | 1.372 (2) |
N1—C3 | 1.363 (2) | N2—C13 | 1.376 (2) |
N1—C4 | 1.411 (2) | N3—C23 | 1.365 (2) |
N1—C1 | 1.482 (2) | N3—C22 | 1.371 (2) |
| | | |
C3—N1—C4 | 132.2 (1) | O2—C7—C6 | 124.8 (1) |
C3—N1—C1 | 94.5 (1) | C12—C11—C1 | 116.2 (1) |
C4—N1—C1 | 130.5 (1) | C21—C11—C1 | 111.2 (1) |
O2—C7—C8 | 116.0 (1) | | |
| | | |
C10—O2—C7—C8 | −180.0 (2) | C2—C1—C11—C12 | −156.0 (1) |
C10—O2—C7—C6 | −0.1 (2) | C2—C1—C11—C21 | 72.0 (1) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O1i | 0.86 | 2.10 | 2.907 (2) | 157 |
Symmetry code: (i) −x+3/2, y−1/2, −z+1/2. |
The importance and structural diversity of biologically active β-lactam antibiotics, the most widely employed family of antimicrobial agents to date, accounting for 50% of the world's total antibiotic market, led to the development of efficient approaches for the construction of appropriately substituted 2-azetidinones (Alcaide et al., 2000). The minimum structural features believed to be essential for antimicrobial activity in the β-lactams antibiotics have undergone considerable revision, since in recent years several natural monocyclic β-lactams were shown to exhibit high antibacterial activity. Now it seems that the minimum requirement for biological activity is a suitably substituted monocyclic 2-azetidinone ring (Page, 1984). Indole, being an integral part of many natural products of therapeutic importance, possesses potentially reactive sites for a variety of chemical reactions to generate molecular diversity (Farhanullah et al., 2004). In view of its importance and to obtain more detailed information on the structural conformation of the molecule, the crystal structure of the title cxompound, (I), was determined.
The molecular structure of (I) is illustrated in Fig. 1. Selected geometric parameters are presented in Table 1. Compound (I) consists of two indole moieties, a β-lactam ring, a methoxyphenyl ring and a phenyl ring. The geometry of the β-lactam ring is comparable to the related reported structure (Ercan et al., 1996; Ülkü et al., 1997). The two indole rings have bond distances and angles comparable to those reported for other indole derivatives (Karthick et al., 2005; Sonar et al., 2005).
The exocyclic angles around atom C7 show considerable asymmetry, O2—C7—C6 [124.8 (1)°] being wider than O2—C7—C8 [116.0 (1)°]. This difference is due to steric repulsion between the phenyl ring and the methyl group. The torsion angles C10—O2—C7—C6 [−0.1 (2)°] and C10—O2—C7—C8 [−180.0 (2)°] indicate that the methyl group does not deviate significantly from the plane of the attached benzene ring. The two indole moieties enclose a dihedral angle of 76.4 (1)°. The phenyl ring and the methoxyphenyl ring enclose a dihedral angle of 55.2 (1)°. The β-lactam ring is planar, with a maximum deviation of −0.109 (1)° for atom O1.
The molecular structure is influenced by a π–π interaction between the five-membered ring (C21/C22/N3/C23/C28) of one indole moiety and the phenyl ring (C30–C35), with a centroid separation of 3.695 (1) Å (Fig. 2). In the crystal structure, the molecules are linked by N—H···O1 hydrogen bonds so that a helical structure is formed. In addition, inversion-related molecules are linked by weak N—H···π interactions: H3 is 2.53 Å from the centroid of the five-membered ring composed of atoms C12/C13/N2/C14/C19 at (1 − x,-y,1 − z), with an N3—H3···centroid angle of 152° and an N3···centroid distance of 3.317 (1) Å.