Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S160053680502948X/ci6643sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S160053680502948X/ci6643Isup2.hkl |
CCDC reference: 287510
Key indicators
- Single-crystal X-ray study
- T = 292 K
- Mean (C-C) = 0.006 Å
- R factor = 0.065
- wR factor = 0.188
- Data-to-parameter ratio = 13.6
checkCIF/PLATON results
No syntax errors found
Alert level B PLAT220_ALERT_2_B Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.97 Ratio PLAT222_ALERT_3_B Large Non-Solvent H Ueq(max)/Ueq(min) ... 4.55 Ratio
Alert level C PLAT066_ALERT_1_C Predicted and Reported Transmissions Identical . ? PLAT230_ALERT_2_C Hirshfeld Test Diff for O6 - C17 .. 6.18 su PLAT230_ALERT_2_C Hirshfeld Test Diff for C13 - C14 .. 5.42 su PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for C2 PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for C24 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C6 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C13 PLAT340_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 6 PLAT360_ALERT_2_C Short C(sp3)-C(sp3) Bond C13 - C14 ... 1.41 Ang. PLAT360_ALERT_2_C Short C(sp3)-C(sp3) Bond C17 - C18 ... 1.41 Ang. PLAT410_ALERT_2_C Short Intra H...H Contact H19A .. H26B .. 1.91 Ang. PLAT410_ALERT_2_C Short Intra H...H Contact H20B .. H22A .. 1.93 Ang.
0 ALERT level A = In general: serious problem 2 ALERT level B = Potentially serious problem 12 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 11 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion
Cyclohexylamine (0.99 g, 10 mmol) and formaldehyde (1.2 g, 40 mmol) were added to a stirred solution of diethyl 2,5-dioxotetrahydroimidazo[4,5-d]imidazole-3a,6a-dicarboxylate (1.43 g, 5 mmol) in acetonitrile (50 ml) under a nitrogen atmosphere. The mixture was stirred overnight at room temperature. The solvent was evaporated and the compound was purified by column chromatography to yield (I) (2.40 g, 90%) as a colourless solid. Colourless block-like crystals of (I) suitable for X-ray data collection were obtained by slow evaporation of an acetic acid–ethyl acetate solution at 283 K.
Methyl H atoms were constrained to an ideal geometry, with C—H = 0.96 Å and Uiso(H) = 1.5Ueq(C), but each group was allowed to rotate freely about its C—C bond. All other H atoms were placed in geometrically idealized positions and constrained to ride on their parent atoms, with C—H = 0.97 or 0.98 Å and Uiso(H) = 1.2Ueq(C). As attempts to restrain the C13—C14 and C17—C18 bond distances of the ethyl groups to 1.53 (1) Å resulted in limited improvement [1.444 (6) and 1.450 (6) Å, respectively], the restraints were not used. Also, no suitable disorder model was found for the ethyl groups.
Data collection: SMART (Bruker, 2000); cell refinement: SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 2000); software used to prepare material for publication: SHELXTL.
C26H40N6O6 | Z = 2 |
Mr = 532.64 | F(000) = 572 |
Triclinic, P1 | Dx = 1.305 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.9337 (8) Å | Cell parameters from 1576 reflections |
b = 13.0996 (13) Å | θ = 2.4–21.5° |
c = 13.9361 (14) Å | µ = 0.09 mm−1 |
α = 78.913 (2)° | T = 292 K |
β = 79.686 (2)° | Plate, colorless |
γ = 74.259 (2)° | 0.40 × 0.18 × 0.08 mm |
V = 1355.6 (2) Å3 |
Bruker SMART CCD area-detector diffractometer | 4685 independent reflections |
Radiation source: fine-focus sealed tube | 3120 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.022 |
ϕ and ω scans | θmax = 25.0°, θmin = 1.6° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1997) | h = −9→9 |
Tmin = 0.963, Tmax = 0.993 | k = −15→15 |
6851 measured reflections | l = −16→8 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.065 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.188 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0926P)2 + 0.2271P] where P = (Fo2 + 2Fc2)/3 |
4685 reflections | (Δ/σ)max = 0.001 |
345 parameters | Δρmax = 0.36 e Å−3 |
0 restraints | Δρmin = −0.29 e Å−3 |
C26H40N6O6 | γ = 74.259 (2)° |
Mr = 532.64 | V = 1355.6 (2) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.9337 (8) Å | Mo Kα radiation |
b = 13.0996 (13) Å | µ = 0.09 mm−1 |
c = 13.9361 (14) Å | T = 292 K |
α = 78.913 (2)° | 0.40 × 0.18 × 0.08 mm |
β = 79.686 (2)° |
Bruker SMART CCD area-detector diffractometer | 4685 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1997) | 3120 reflections with I > 2σ(I) |
Tmin = 0.963, Tmax = 0.993 | Rint = 0.022 |
6851 measured reflections |
R[F2 > 2σ(F2)] = 0.065 | 0 restraints |
wR(F2) = 0.188 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.36 e Å−3 |
4685 reflections | Δρmin = −0.29 e Å−3 |
345 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.2687 (6) | 0.7580 (2) | −0.0421 (3) | 0.0725 (10) | |
H1A | 0.1924 | 0.7315 | −0.0733 | 0.087* | |
H1B | 0.3874 | 0.7392 | −0.0771 | 0.087* | |
C2 | 0.2050 (7) | 0.8805 (3) | −0.0506 (3) | 0.0979 (15) | |
H2A | 0.2109 | 0.9119 | −0.1198 | 0.117* | |
H2B | 0.0827 | 0.8997 | −0.0209 | 0.117* | |
C3 | 0.3143 (5) | 0.9253 (3) | −0.0010 (3) | 0.0780 (11) | |
H3A | 0.2666 | 1.0022 | −0.0039 | 0.094* | |
H3B | 0.4344 | 0.9129 | −0.0349 | 0.094* | |
C4 | 0.3145 (5) | 0.8727 (3) | 0.1047 (3) | 0.0723 (10) | |
H4A | 0.1959 | 0.8922 | 0.1397 | 0.087* | |
H4B | 0.3913 | 0.8994 | 0.1353 | 0.087* | |
C5 | 0.3764 (5) | 0.7510 (2) | 0.1149 (3) | 0.0643 (9) | |
H5A | 0.4996 | 0.7311 | 0.0868 | 0.077* | |
H5B | 0.3673 | 0.7208 | 0.1843 | 0.077* | |
C6 | 0.2685 (4) | 0.7045 (2) | 0.0635 (2) | 0.0441 (7) | |
H6 | 0.1465 | 0.7190 | 0.0967 | 0.053* | |
C7 | 0.2150 (4) | 0.5367 (2) | 0.03513 (19) | 0.0448 (7) | |
H7A | 0.2820 | 0.4699 | 0.0126 | 0.054* | |
H7B | 0.1614 | 0.5833 | −0.0201 | 0.054* | |
C8 | 0.4057 (4) | 0.5219 (2) | 0.1526 (2) | 0.0473 (7) | |
H8A | 0.4767 | 0.5592 | 0.1763 | 0.057* | |
H8B | 0.4826 | 0.4550 | 0.1349 | 0.057* | |
C9 | −0.0813 (3) | 0.5927 (2) | 0.13368 (19) | 0.0413 (6) | |
C10 | 0.2055 (4) | 0.5500 (2) | 0.3135 (2) | 0.0445 (7) | |
C11 | 0.1351 (3) | 0.4558 (2) | 0.20575 (19) | 0.0402 (6) | |
C12 | 0.2085 (4) | 0.3346 (2) | 0.2009 (2) | 0.0495 (7) | |
C13 | 0.1547 (6) | 0.1823 (3) | 0.1599 (3) | 0.0855 (12) | |
H13A | 0.1018 | 0.1690 | 0.1074 | 0.103* | |
H13B | 0.2821 | 0.1631 | 0.1425 | 0.103* | |
C14 | 0.1069 (9) | 0.1188 (4) | 0.2488 (5) | 0.161 (3) | |
H14A | 0.1588 | 0.1324 | 0.3008 | 0.241* | |
H14B | 0.1487 | 0.0443 | 0.2416 | 0.241* | |
H14C | −0.0194 | 0.1362 | 0.2648 | 0.241* | |
C15 | −0.0277 (3) | 0.4863 (2) | 0.28580 (19) | 0.0413 (6) | |
C16 | −0.1021 (4) | 0.3914 (2) | 0.3407 (2) | 0.0512 (7) | |
C17 | −0.3425 (6) | 0.3082 (4) | 0.3635 (4) | 0.1058 (15) | |
H17A | −0.4164 | 0.2977 | 0.3196 | 0.127* | |
H17B | −0.2532 | 0.2420 | 0.3770 | 0.127* | |
C18 | −0.4454 (8) | 0.3377 (5) | 0.4519 (5) | 0.137 (2) | |
H18A | −0.3698 | 0.3440 | 0.4959 | 0.206* | |
H18B | −0.5079 | 0.2839 | 0.4822 | 0.206* | |
H18C | −0.5286 | 0.4053 | 0.4377 | 0.206* | |
C19 | −0.2799 (4) | 0.6468 (2) | 0.2875 (2) | 0.0514 (7) | |
H19A | −0.3433 | 0.7040 | 0.2422 | 0.062* | |
H19B | −0.3652 | 0.6114 | 0.3296 | 0.062* | |
C20 | −0.0920 (4) | 0.6070 (2) | 0.4099 (2) | 0.0501 (7) | |
H20A | −0.1691 | 0.5687 | 0.4561 | 0.060* | |
H20B | −0.0328 | 0.6380 | 0.4479 | 0.060* | |
C21 | −0.1088 (4) | 0.7763 (3) | 0.2960 (2) | 0.0604 (8) | |
H21 | −0.0028 | 0.7432 | 0.2540 | 0.072* | |
C22 | −0.0539 (5) | 0.8311 (3) | 0.3682 (3) | 0.0768 (11) | |
H22A | 0.0191 | 0.7768 | 0.4115 | 0.092* | |
H22B | 0.0176 | 0.8788 | 0.3314 | 0.092* | |
C23 | −0.2049 (7) | 0.8937 (4) | 0.4296 (3) | 0.1020 (14) | |
H23A | −0.1605 | 0.9298 | 0.4707 | 0.122* | |
H23B | −0.2691 | 0.8453 | 0.4727 | 0.122* | |
C24 | −0.3309 (7) | 0.9774 (4) | 0.3648 (4) | 0.1148 (17) | |
H24A | −0.4356 | 1.0106 | 0.4062 | 0.138* | |
H24B | −0.2732 | 1.0330 | 0.3302 | 0.138* | |
C25 | −0.3845 (6) | 0.9246 (3) | 0.2901 (3) | 0.0932 (13) | |
H25A | −0.4566 | 0.8763 | 0.3248 | 0.112* | |
H25B | −0.4549 | 0.9794 | 0.2461 | 0.112* | |
C26 | −0.2276 (5) | 0.8638 (3) | 0.2314 (3) | 0.0748 (10) | |
H26A | −0.1598 | 0.9131 | 0.1935 | 0.090* | |
H26B | −0.2666 | 0.8312 | 0.1853 | 0.090* | |
N1 | 0.3357 (3) | 0.58710 (17) | 0.06515 (16) | 0.0443 (6) | |
N2 | 0.0739 (3) | 0.51436 (17) | 0.11442 (15) | 0.0409 (5) | |
N3 | 0.2671 (3) | 0.49783 (17) | 0.23314 (16) | 0.0433 (6) | |
N4 | −0.1508 (3) | 0.56850 (17) | 0.23033 (15) | 0.0429 (6) | |
N5 | 0.0418 (3) | 0.53003 (17) | 0.35393 (15) | 0.0425 (5) | |
N6 | −0.1983 (3) | 0.69258 (18) | 0.34765 (17) | 0.0499 (6) | |
O1 | −0.1478 (2) | 0.66630 (16) | 0.07418 (14) | 0.0522 (5) | |
O2 | 0.2829 (3) | 0.59983 (16) | 0.34713 (15) | 0.0595 (6) | |
O3 | 0.3501 (3) | 0.28529 (17) | 0.2210 (2) | 0.0794 (7) | |
O4 | 0.0954 (3) | 0.29573 (15) | 0.17002 (16) | 0.0637 (6) | |
O5 | −0.0194 (3) | 0.32128 (17) | 0.39407 (16) | 0.0662 (6) | |
O6 | −0.2588 (3) | 0.39696 (19) | 0.3181 (2) | 0.0860 (8) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.109 (3) | 0.0487 (18) | 0.063 (2) | −0.0210 (18) | −0.0237 (19) | −0.0020 (16) |
C2 | 0.158 (4) | 0.048 (2) | 0.099 (3) | −0.026 (2) | −0.065 (3) | 0.0049 (19) |
C3 | 0.088 (3) | 0.0470 (19) | 0.099 (3) | −0.0224 (18) | −0.013 (2) | −0.0023 (19) |
C4 | 0.084 (3) | 0.056 (2) | 0.089 (3) | −0.0222 (18) | −0.024 (2) | −0.0208 (18) |
C5 | 0.064 (2) | 0.0563 (19) | 0.079 (2) | −0.0190 (16) | −0.0232 (17) | −0.0066 (16) |
C6 | 0.0389 (15) | 0.0420 (15) | 0.0509 (17) | −0.0099 (12) | −0.0009 (12) | −0.0111 (13) |
C7 | 0.0500 (17) | 0.0451 (15) | 0.0402 (15) | −0.0148 (13) | 0.0004 (13) | −0.0104 (12) |
C8 | 0.0401 (16) | 0.0477 (16) | 0.0528 (17) | −0.0084 (12) | −0.0055 (13) | −0.0086 (13) |
C9 | 0.0422 (16) | 0.0497 (16) | 0.0363 (15) | −0.0150 (13) | −0.0109 (12) | −0.0065 (13) |
C10 | 0.0467 (17) | 0.0433 (15) | 0.0451 (16) | −0.0065 (13) | −0.0173 (13) | −0.0064 (13) |
C11 | 0.0420 (15) | 0.0413 (15) | 0.0382 (14) | −0.0101 (12) | −0.0072 (12) | −0.0063 (11) |
C12 | 0.0519 (19) | 0.0475 (17) | 0.0487 (17) | −0.0129 (15) | −0.0040 (14) | −0.0076 (13) |
C13 | 0.103 (3) | 0.053 (2) | 0.112 (3) | −0.021 (2) | −0.022 (3) | −0.029 (2) |
C14 | 0.194 (6) | 0.081 (3) | 0.197 (7) | −0.054 (4) | 0.058 (5) | −0.048 (4) |
C15 | 0.0437 (15) | 0.0446 (15) | 0.0374 (14) | −0.0130 (12) | −0.0091 (12) | −0.0038 (12) |
C16 | 0.0571 (19) | 0.0546 (18) | 0.0441 (17) | −0.0214 (15) | −0.0038 (14) | −0.0049 (14) |
C17 | 0.086 (3) | 0.105 (3) | 0.131 (4) | −0.049 (3) | −0.006 (3) | −0.002 (3) |
C18 | 0.128 (4) | 0.132 (4) | 0.130 (4) | −0.036 (4) | 0.019 (4) | 0.001 (4) |
C19 | 0.0436 (16) | 0.0576 (18) | 0.0510 (17) | −0.0084 (14) | −0.0095 (13) | −0.0060 (14) |
C20 | 0.0588 (18) | 0.0494 (16) | 0.0385 (15) | −0.0079 (14) | −0.0069 (13) | −0.0054 (13) |
C21 | 0.058 (2) | 0.064 (2) | 0.0517 (18) | −0.0099 (16) | 0.0007 (15) | −0.0044 (15) |
C22 | 0.100 (3) | 0.067 (2) | 0.073 (2) | −0.035 (2) | −0.022 (2) | −0.0032 (19) |
C23 | 0.140 (4) | 0.099 (3) | 0.075 (3) | −0.044 (3) | −0.003 (3) | −0.024 (3) |
C24 | 0.134 (4) | 0.080 (3) | 0.110 (4) | −0.005 (3) | 0.021 (3) | −0.031 (3) |
C25 | 0.080 (3) | 0.077 (3) | 0.108 (3) | 0.002 (2) | −0.014 (2) | −0.008 (2) |
C26 | 0.084 (3) | 0.062 (2) | 0.071 (2) | −0.0116 (19) | −0.014 (2) | 0.0030 (18) |
N1 | 0.0435 (13) | 0.0424 (13) | 0.0468 (13) | −0.0104 (10) | −0.0043 (11) | −0.0081 (10) |
N2 | 0.0430 (13) | 0.0448 (12) | 0.0366 (12) | −0.0119 (10) | −0.0073 (10) | −0.0068 (10) |
N3 | 0.0392 (12) | 0.0457 (13) | 0.0464 (13) | −0.0097 (10) | −0.0105 (10) | −0.0068 (10) |
N4 | 0.0380 (12) | 0.0499 (13) | 0.0396 (13) | −0.0070 (10) | −0.0090 (10) | −0.0055 (10) |
N5 | 0.0493 (14) | 0.0440 (12) | 0.0355 (12) | −0.0103 (10) | −0.0101 (10) | −0.0064 (10) |
N6 | 0.0527 (14) | 0.0488 (14) | 0.0458 (13) | −0.0085 (11) | −0.0077 (11) | −0.0061 (11) |
O1 | 0.0509 (12) | 0.0597 (12) | 0.0440 (11) | −0.0082 (10) | −0.0164 (9) | −0.0018 (10) |
O2 | 0.0541 (13) | 0.0670 (13) | 0.0675 (14) | −0.0150 (10) | −0.0230 (11) | −0.0208 (11) |
O3 | 0.0584 (15) | 0.0511 (13) | 0.125 (2) | −0.0008 (11) | −0.0252 (14) | −0.0112 (13) |
O4 | 0.0746 (15) | 0.0452 (12) | 0.0788 (15) | −0.0124 (11) | −0.0240 (12) | −0.0183 (10) |
O5 | 0.0860 (16) | 0.0578 (13) | 0.0567 (13) | −0.0258 (12) | −0.0187 (12) | 0.0070 (11) |
O6 | 0.0630 (16) | 0.0772 (16) | 0.120 (2) | −0.0393 (13) | −0.0197 (14) | 0.0182 (15) |
C1—C6 | 1.504 (4) | C14—H14A | 0.96 |
C1—C2 | 1.535 (5) | C14—H14B | 0.96 |
C1—H1A | 0.97 | C14—H14C | 0.96 |
C1—H1B | 0.97 | C15—N4 | 1.446 (3) |
C2—C3 | 1.490 (5) | C15—N5 | 1.449 (3) |
C2—H2A | 0.97 | C15—C16 | 1.534 (4) |
C2—H2B | 0.97 | C16—O5 | 1.188 (3) |
C3—C4 | 1.502 (5) | C16—O6 | 1.315 (4) |
C3—H3A | 0.97 | C17—C18 | 1.409 (7) |
C3—H3B | 0.97 | C17—O6 | 1.476 (5) |
C4—C5 | 1.522 (4) | C17—H17A | 0.97 |
C4—H4A | 0.97 | C17—H17B | 0.97 |
C4—H4B | 0.97 | C18—H18A | 0.96 |
C5—C6 | 1.512 (4) | C18—H18B | 0.96 |
C5—H5A | 0.97 | C18—H18C | 0.96 |
C5—H5B | 0.97 | C19—N6 | 1.442 (4) |
C6—N1 | 1.482 (3) | C19—N4 | 1.479 (3) |
C6—H6 | 0.98 | C19—H19A | 0.97 |
C7—N1 | 1.456 (3) | C19—H19B | 0.97 |
C7—N2 | 1.473 (3) | C20—N6 | 1.448 (3) |
C7—H7A | 0.97 | C20—N5 | 1.475 (3) |
C7—H7B | 0.97 | C20—H20A | 0.97 |
C8—N1 | 1.452 (3) | C20—H20B | 0.97 |
C8—N3 | 1.476 (3) | C21—N6 | 1.470 (4) |
C8—H8A | 0.97 | C21—C22 | 1.524 (5) |
C8—H8B | 0.97 | C21—C26 | 1.527 (4) |
C9—O1 | 1.212 (3) | C21—H21 | 0.98 |
C9—N4 | 1.372 (3) | C22—C23 | 1.487 (6) |
C9—N2 | 1.393 (3) | C22—H22A | 0.97 |
C10—O2 | 1.209 (3) | C22—H22B | 0.97 |
C10—N3 | 1.370 (4) | C23—C24 | 1.538 (6) |
C10—N5 | 1.392 (4) | C23—H23A | 0.97 |
C11—N3 | 1.443 (3) | C23—H23B | 0.97 |
C11—N2 | 1.445 (3) | C24—C25 | 1.528 (7) |
C11—C12 | 1.546 (4) | C24—H24A | 0.97 |
C11—C15 | 1.565 (4) | C24—H24B | 0.97 |
C12—O3 | 1.186 (3) | C25—C26 | 1.484 (5) |
C12—O4 | 1.311 (3) | C25—H25A | 0.97 |
C13—C14 | 1.407 (7) | C25—H25B | 0.97 |
C13—O4 | 1.458 (4) | C26—H26A | 0.97 |
C13—H13A | 0.97 | C26—H26B | 0.97 |
C13—H13B | 0.97 | ||
C6—C1—C2 | 112.0 (3) | O5—C16—C15 | 121.3 (3) |
C6—C1—H1A | 109.2 | O6—C16—C15 | 112.1 (3) |
C2—C1—H1A | 109.2 | C18—C17—O6 | 106.5 (4) |
C6—C1—H1B | 109.2 | C18—C17—H17A | 110.4 |
C2—C1—H1B | 109.2 | O6—C17—H17A | 110.4 |
H1A—C1—H1B | 107.9 | C18—C17—H17B | 110.4 |
C3—C2—C1 | 111.5 (3) | O6—C17—H17B | 110.4 |
C3—C2—H2A | 109.3 | H17A—C17—H17B | 108.6 |
C1—C2—H2A | 109.3 | C17—C18—H18A | 109.5 |
C3—C2—H2B | 109.3 | C17—C18—H18B | 109.5 |
C1—C2—H2B | 109.3 | H18A—C18—H18B | 109.5 |
H2A—C2—H2B | 108.0 | C17—C18—H18C | 109.5 |
C2—C3—C4 | 109.8 (3) | H18A—C18—H18C | 109.5 |
C2—C3—H3A | 109.7 | H18B—C18—H18C | 109.5 |
C4—C3—H3A | 109.7 | N6—C19—N4 | 112.9 (2) |
C2—C3—H3B | 109.7 | N6—C19—H19A | 109.0 |
C4—C3—H3B | 109.7 | N4—C19—H19A | 109.0 |
H3A—C3—H3B | 108.2 | N6—C19—H19B | 109.0 |
C3—C4—C5 | 112.5 (3) | N4—C19—H19B | 109.0 |
C3—C4—H4A | 109.1 | H19A—C19—H19B | 107.8 |
C5—C4—H4A | 109.1 | N6—C20—N5 | 113.2 (2) |
C3—C4—H4B | 109.1 | N6—C20—H20A | 108.9 |
C5—C4—H4B | 109.1 | N5—C20—H20A | 108.9 |
H4A—C4—H4B | 107.8 | N6—C20—H20B | 108.9 |
C6—C5—C4 | 111.9 (3) | N5—C20—H20B | 108.9 |
C6—C5—H5A | 109.2 | H20A—C20—H20B | 107.7 |
C4—C5—H5A | 109.2 | N6—C21—C22 | 111.6 (3) |
C6—C5—H5B | 109.2 | N6—C21—C26 | 111.8 (3) |
C4—C5—H5B | 109.2 | C22—C21—C26 | 107.1 (3) |
H5A—C5—H5B | 107.9 | N6—C21—H21 | 108.7 |
N1—C6—C1 | 108.6 (2) | C22—C21—H21 | 108.7 |
N1—C6—C5 | 112.9 (2) | C26—C21—H21 | 108.7 |
C1—C6—C5 | 109.6 (2) | C23—C22—C21 | 114.0 (3) |
N1—C6—H6 | 108.5 | C23—C22—H22A | 108.8 |
C1—C6—H6 | 108.5 | C21—C22—H22A | 108.8 |
C5—C6—H6 | 108.5 | C23—C22—H22B | 108.8 |
N1—C7—N2 | 113.6 (2) | C21—C22—H22B | 108.8 |
N1—C7—H7A | 108.9 | H22A—C22—H22B | 107.7 |
N2—C7—H7A | 108.9 | C22—C23—C24 | 111.1 (3) |
N1—C7—H7B | 108.9 | C22—C23—H23A | 109.4 |
N2—C7—H7B | 108.9 | C24—C23—H23A | 109.4 |
H7A—C7—H7B | 107.7 | C22—C23—H23B | 109.4 |
N1—C8—N3 | 113.3 (2) | C24—C23—H23B | 109.4 |
N1—C8—H8A | 108.9 | H23A—C23—H23B | 108.0 |
N3—C8—H8A | 108.9 | C25—C24—C23 | 110.5 (3) |
N1—C8—H8B | 108.9 | C25—C24—H24A | 109.5 |
N3—C8—H8B | 108.9 | C23—C24—H24A | 109.5 |
H8A—C8—H8B | 107.7 | C25—C24—H24B | 109.5 |
O1—C9—N4 | 125.9 (2) | C23—C24—H24B | 109.5 |
O1—C9—N2 | 125.9 (2) | H24A—C24—H24B | 108.1 |
N4—C9—N2 | 108.1 (2) | C26—C25—C24 | 111.5 (4) |
O2—C10—N3 | 126.4 (3) | C26—C25—H25A | 109.3 |
O2—C10—N5 | 125.5 (3) | C24—C25—H25A | 109.3 |
N3—C10—N5 | 108.0 (2) | C26—C25—H25B | 109.3 |
N3—C11—N2 | 111.9 (2) | C24—C25—H25B | 109.3 |
N3—C11—C12 | 109.7 (2) | H25A—C25—H25B | 108.0 |
N2—C11—C12 | 111.9 (2) | C25—C26—C21 | 112.4 (3) |
N3—C11—C15 | 103.3 (2) | C25—C26—H26A | 109.1 |
N2—C11—C15 | 103.9 (2) | C21—C26—H26A | 109.1 |
C12—C11—C15 | 115.9 (2) | C25—C26—H26B | 109.1 |
O3—C12—O4 | 125.5 (3) | C21—C26—H26B | 109.1 |
O3—C12—C11 | 123.5 (3) | H26A—C26—H26B | 107.9 |
O4—C12—C11 | 111.0 (2) | C8—N1—C7 | 109.1 (2) |
C14—C13—O4 | 110.3 (4) | C8—N1—C6 | 118.8 (2) |
C14—C13—H13A | 109.6 | C7—N1—C6 | 114.0 (2) |
O4—C13—H13A | 109.6 | C9—N2—C11 | 110.3 (2) |
C14—C13—H13B | 109.6 | C9—N2—C7 | 121.3 (2) |
O4—C13—H13B | 109.6 | C11—N2—C7 | 114.6 (2) |
H13A—C13—H13B | 108.1 | C10—N3—C11 | 112.5 (2) |
C13—C14—H14A | 109.5 | C10—N3—C8 | 125.6 (2) |
C13—C14—H14B | 109.5 | C11—N3—C8 | 115.6 (2) |
H14A—C14—H14B | 109.5 | C9—N4—C15 | 112.3 (2) |
C13—C14—H14C | 109.5 | C9—N4—C19 | 124.1 (2) |
H14A—C14—H14C | 109.5 | C15—N4—C19 | 115.9 (2) |
H14B—C14—H14C | 109.5 | C10—N5—C15 | 111.0 (2) |
N4—C15—N5 | 111.8 (2) | C10—N5—C20 | 121.0 (2) |
N4—C15—C16 | 114.1 (2) | C15—N5—C20 | 114.5 (2) |
N5—C15—C16 | 109.9 (2) | C19—N6—C20 | 109.2 (2) |
N4—C15—C11 | 102.81 (19) | C19—N6—C21 | 116.3 (2) |
N5—C15—C11 | 103.3 (2) | C20—N6—C21 | 114.4 (2) |
C16—C15—C11 | 114.3 (2) | C12—O4—C13 | 115.2 (3) |
O5—C16—O6 | 126.5 (3) | C16—O6—C17 | 117.5 (3) |
C6—C1—C2—C3 | 57.1 (5) | C15—C11—N2—C7 | 155.8 (2) |
C1—C2—C3—C4 | −55.8 (5) | N1—C7—N2—C9 | 84.6 (3) |
C2—C3—C4—C5 | 55.6 (4) | N1—C7—N2—C11 | −51.8 (3) |
C3—C4—C5—C6 | −55.5 (4) | O2—C10—N3—C11 | −173.7 (3) |
C2—C1—C6—N1 | −178.6 (3) | N5—C10—N3—C11 | 9.9 (3) |
C2—C1—C6—C5 | −54.8 (4) | O2—C10—N3—C8 | −22.9 (4) |
C4—C5—C6—N1 | 175.2 (3) | N5—C10—N3—C8 | 160.7 (2) |
C4—C5—C6—C1 | 54.0 (4) | N2—C11—N3—C10 | 109.3 (2) |
N3—C11—C12—O3 | 2.8 (4) | C12—C11—N3—C10 | −125.9 (2) |
N2—C11—C12—O3 | 127.5 (3) | C15—C11—N3—C10 | −1.8 (3) |
C15—C11—C12—O3 | −113.6 (3) | N2—C11—N3—C8 | −44.6 (3) |
N3—C11—C12—O4 | −176.0 (2) | C12—C11—N3—C8 | 80.2 (3) |
N2—C11—C12—O4 | −51.2 (3) | C15—C11—N3—C8 | −155.7 (2) |
C15—C11—C12—O4 | 67.6 (3) | N1—C8—N3—C10 | −99.7 (3) |
N3—C11—C15—N4 | 109.9 (2) | N1—C8—N3—C11 | 50.3 (3) |
N2—C11—C15—N4 | −7.0 (2) | O1—C9—N4—C15 | −171.2 (2) |
C12—C11—C15—N4 | −130.2 (2) | N2—C9—N4—C15 | 12.1 (3) |
N3—C11—C15—N5 | −6.5 (2) | O1—C9—N4—C19 | −23.2 (4) |
N2—C11—C15—N5 | −123.4 (2) | N2—C9—N4—C19 | 160.2 (2) |
C12—C11—C15—N5 | 113.4 (2) | N5—C15—N4—C9 | 107.4 (2) |
N3—C11—C15—C16 | −125.9 (2) | C16—C15—N4—C9 | −127.1 (2) |
N2—C11—C15—C16 | 117.2 (2) | C11—C15—N4—C9 | −2.8 (3) |
C12—C11—C15—C16 | −6.0 (3) | N5—C15—N4—C19 | −43.5 (3) |
N4—C15—C16—O5 | −175.3 (3) | C16—C15—N4—C19 | 82.0 (3) |
N5—C15—C16—O5 | −48.8 (4) | C11—C15—N4—C19 | −153.7 (2) |
C11—C15—C16—O5 | 66.8 (3) | N6—C19—N4—C9 | −97.0 (3) |
N4—C15—C16—O6 | 7.0 (3) | N6—C19—N4—C15 | 50.1 (3) |
N5—C15—C16—O6 | 133.5 (3) | O2—C10—N5—C15 | 169.0 (2) |
C11—C15—C16—O6 | −110.9 (3) | N3—C10—N5—C15 | −14.6 (3) |
N6—C21—C22—C23 | −65.8 (4) | O2—C10—N5—C20 | 30.7 (4) |
C26—C21—C22—C23 | 56.9 (4) | N3—C10—N5—C20 | −152.9 (2) |
C21—C22—C23—C24 | −55.5 (5) | N4—C15—N5—C10 | −97.0 (2) |
C22—C23—C24—C25 | 51.8 (5) | C16—C15—N5—C10 | 135.3 (2) |
C23—C24—C25—C26 | −53.8 (5) | C11—C15—N5—C10 | 12.9 (3) |
C24—C25—C26—C21 | 58.5 (5) | N4—C15—N5—C20 | 44.3 (3) |
N6—C21—C26—C25 | 64.8 (4) | C16—C15—N5—C20 | −83.5 (3) |
C22—C21—C26—C25 | −57.8 (4) | C11—C15—N5—C20 | 154.1 (2) |
N3—C8—N1—C7 | −53.0 (3) | N6—C20—N5—C10 | 84.7 (3) |
N3—C8—N1—C6 | 79.9 (3) | N6—C20—N5—C15 | −52.4 (3) |
N2—C7—N1—C8 | 54.1 (3) | N4—C19—N6—C20 | −54.2 (3) |
N2—C7—N1—C6 | −81.2 (3) | N4—C19—N6—C21 | 77.2 (3) |
C1—C6—N1—C8 | 158.8 (3) | N5—C20—N6—C19 | 55.9 (3) |
C5—C6—N1—C8 | 37.0 (3) | N5—C20—N6—C21 | −76.5 (3) |
C1—C6—N1—C7 | −70.4 (3) | C22—C21—N6—C19 | 170.8 (3) |
C5—C6—N1—C7 | 167.8 (2) | C26—C21—N6—C19 | 50.9 (3) |
O1—C9—N2—C11 | 166.3 (2) | C22—C21—N6—C20 | −60.3 (3) |
N4—C9—N2—C11 | −17.0 (3) | C26—C21—N6—C20 | 179.8 (2) |
O1—C9—N2—C7 | 28.2 (4) | O3—C12—O4—C13 | −0.5 (5) |
N4—C9—N2—C7 | −155.1 (2) | C11—C12—O4—C13 | 178.2 (3) |
N3—C11—N2—C9 | −96.1 (2) | C14—C13—O4—C12 | 89.7 (5) |
C12—C11—N2—C9 | 140.4 (2) | O5—C16—O6—C17 | 0.4 (5) |
C15—C11—N2—C9 | 14.7 (3) | C15—C16—O6—C17 | 178.0 (3) |
N3—C11—N2—C7 | 45.1 (3) | C18—C17—O6—C16 | 91.1 (5) |
C12—C11—N2—C7 | −78.5 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
C20—H20B···O5i | 0.97 | 2.49 | 3.381 (4) | 152 |
C17—H17A···O3ii | 0.97 | 2.55 | 3.513 (6) | 171 |
Symmetry codes: (i) −x, −y+1, −z+1; (ii) x−1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C26H40N6O6 |
Mr | 532.64 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 292 |
a, b, c (Å) | 7.9337 (8), 13.0996 (13), 13.9361 (14) |
α, β, γ (°) | 78.913 (2), 79.686 (2), 74.259 (2) |
V (Å3) | 1355.6 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.40 × 0.18 × 0.08 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1997) |
Tmin, Tmax | 0.963, 0.993 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6851, 4685, 3120 |
Rint | 0.022 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.065, 0.188, 1.05 |
No. of reflections | 4685 |
No. of parameters | 345 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.36, −0.29 |
Computer programs: SMART (Bruker, 2000), SAINT (Bruker, 2000), SAINT, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL (Bruker, 2000), SHELXTL.
C1—C6 | 1.504 (4) | C10—O2 | 1.209 (3) |
C6—N1 | 1.482 (3) | C10—N3 | 1.370 (4) |
C7—N1 | 1.456 (3) | C11—N3 | 1.443 (3) |
C8—N1 | 1.452 (3) | C11—C12 | 1.546 (4) |
C9—O1 | 1.212 (3) | C12—O3 | 1.186 (3) |
C9—N2 | 1.393 (3) | C13—C14 | 1.407 (7) |
N1—C6—C1 | 108.6 (2) | O3—C12—O4 | 125.5 (3) |
C1—C6—C5 | 109.6 (2) | O4—C12—C11 | 111.0 (2) |
N1—C7—N2 | 113.6 (2) | O5—C16—O6 | 126.5 (3) |
N1—C8—N3 | 113.3 (2) | O6—C16—C15 | 112.1 (3) |
N3—C11—C12—O3 | 2.8 (4) | C12—C11—C15—N5 | 113.4 (2) |
C15—C11—C12—O3 | −113.6 (3) | N3—C11—C15—C16 | −125.9 (2) |
N3—C11—C12—O4 | −176.0 (2) | C12—C11—C15—C16 | −6.0 (3) |
C15—C11—C12—O4 | 67.6 (3) | N4—C15—C16—O5 | −175.3 (3) |
N3—C11—C15—N4 | 109.9 (2) | C11—C15—C16—O5 | 66.8 (3) |
C12—C11—C15—N4 | −130.2 (2) | N4—C15—C16—O6 | 7.0 (3) |
N3—C11—C15—N5 | −6.5 (2) | C11—C15—C16—O6 | −110.9 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
C20—H20B···O5i | 0.97 | 2.49 | 3.381 (4) | 152 |
C17—H17A···O3ii | 0.97 | 2.55 | 3.513 (6) | 171 |
Symmetry codes: (i) −x, −y+1, −z+1; (ii) x−1, y, z. |
In current coordination and supramolecular chemistry, the rational design of coordination architectures represents one of the most exciting and rapidly developing fields, owing to their potential as functional materials (Braga et al., 1998). Glycoluril derivatives have applications in many areas, such as explosives, slow-release fertilizers, crosslinkers, iodogens, stabilizers of organic compounds against photodegradation, and reagents in combinatorial chemistry (Wu et al., 2002). Herein, we present the structure of the title compound, (I) (Fig. 1), as a continuation of our previous studies in this area (Li & Wu, 2005).
The molecule of (I) exhibits normal geometric parameters (Table 1), except for shortened C—C distances in the ethyl groups. The imidazolidine rings adopt envelope conformations, whereas, the cyclohexane and triazinane rings are in chair conformations. The crystal packing is stabilized by C—H···O hydrogen bonds (Fig. 2 and Table 2).