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The title compound, C29H35NO3, was obtained as a major product by reduction of (S)-tert-butyl 4-dibenzyl­amino-3-oxo-5-phenyl­penta­noate. The mol­ecular packing in the crystal structure is stabilized by weak inter­molecular inter­actions and van der Waals forces.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536805042728/ww6444sup1.cif
Contains datablocks I, global

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S1600536805042728/ww6444Isup2.hkl
Contains datablock I

CCDC reference: 298569

Key indicators

  • Single-crystal X-ray study
  • T = 293 K
  • Mean [sigma](C-C) = 0.007 Å
  • R factor = 0.063
  • wR factor = 0.178
  • Data-to-parameter ratio = 10.2

checkCIF/PLATON results

No syntax errors found



Alert level B PLAT201_ALERT_2_B Isotropic non-H Atoms in Main Residue(s) ....... 1
Alert level C PLAT066_ALERT_1_C Predicted and Reported Transmissions Identical . ? PLAT199_ALERT_1_C Check the Reported _cell_measurement_temperature 293 K PLAT200_ALERT_1_C Check the Reported _diffrn_ambient_temperature . 293 K PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 2.66 Ratio PLAT222_ALERT_3_C Large Non-Solvent H Ueq(max)/Ueq(min) ... 3.34 Ratio PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C1 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C26 PLAT331_ALERT_2_C Small Average Phenyl C-C Dist. C6 -C11 1.37 Ang. PLAT331_ALERT_2_C Small Average Phenyl C-C Dist. C13 -C18 1.37 Ang. PLAT331_ALERT_2_C Small Average Phenyl C-C Dist. C20 -C25 1.36 Ang. PLAT340_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 7
Alert level G REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 26.50 From the CIF: _reflns_number_total 2994 Count of symmetry unique reflns 2997 Completeness (_total/calc) 99.90% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 0 Fraction of Friedel pairs measured 0.000 Are heavy atom types Z>Si present no
0 ALERT level A = In general: serious problem 1 ALERT level B = Potentially serious problem 11 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 3 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 7 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion

Computing details top

Data collection: SMART (Bruker, 2001); cell refinement: SMART; data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 (Farrugia, 1997) and ViewerPro (Accelrys, 2001); software used to prepare material for publication: SHELXL97.

(3S,4S)-tert-Butyl 4-dibenzylamino-3-hydroxy-5-phenylpentanoate top
Crystal data top
C29H35NO3F(000) = 960
Mr = 445.58Dx = 1.154 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 4261 reflections
a = 10.351 (3) Åθ = 2.6–22.0°
b = 12.615 (3) ŵ = 0.07 mm1
c = 19.640 (5) ÅT = 293 K
V = 2564.5 (11) Å3Chunk, colorless
Z = 40.56 × 0.28 × 0.18 mm
Data collection top
Bruker APEX area-detector
diffractometer
2994 independent reflections
Radiation source: fine-focus sealed tube2600 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.030
φ and ω scansθmax = 26.5°, θmin = 1.9°
Absorption correction: multi-scan
(SADABS; Bruker, 2001)
h = 1212
Tmin = 0.960, Tmax = 0.987k = 1513
14713 measured reflectionsl = 2424
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.063Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.178H-atom parameters constrained
S = 1.12 w = 1/[σ2(Fo2) + (0.0835P)2 + 0.6494P]
where P = (Fo2 + 2Fc2)/3
2994 reflections(Δ/σ)max < 0.001
293 parametersΔρmax = 0.57 e Å3
0 restraintsΔρmin = 0.33 e Å3
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N10.6082 (3)0.1909 (2)0.11622 (13)0.0445 (6)
C10.6767 (4)0.4403 (3)0.03267 (18)0.0525 (8)
C20.6804 (4)0.3561 (2)0.02100 (17)0.0507 (8)
H2A0.62560.37750.05860.061*
H2B0.76800.35010.03810.061*
C30.6370 (3)0.2497 (3)0.00395 (17)0.0448 (7)
H3A0.68750.23180.04460.054*
C40.6608 (3)0.1644 (2)0.04936 (15)0.0419 (7)
H4A0.75470.16130.05530.050*
C50.6211 (4)0.0552 (3)0.02447 (18)0.0523 (8)
H5A0.62880.00590.06210.063*
H5B0.53070.05780.01160.063*
C60.6968 (4)0.0125 (2)0.03441 (17)0.0517 (8)
C70.8288 (4)0.0010 (3)0.0309 (2)0.0608 (9)
H7A0.87280.02520.00730.073*
C80.8973 (5)0.0458 (3)0.0832 (2)0.0707 (11)
H8A0.98650.05290.07980.085*
C90.8360 (6)0.0810 (4)0.1387 (2)0.0783 (13)
H9A0.88230.11310.17370.094*
C100.7068 (6)0.0697 (4)0.1437 (2)0.0818 (14)
H10A0.66450.09360.18260.098*
C110.6358 (5)0.0228 (3)0.0918 (2)0.0693 (11)
H11A0.54670.01550.09610.083*
C120.6910 (4)0.1492 (3)0.16972 (17)0.0563 (9)
H12A0.72100.07930.15650.068*
H12B0.64060.14140.21110.068*
C130.8049 (4)0.2177 (3)0.18414 (15)0.0534 (8)
C140.7869 (4)0.3223 (4)0.2011 (2)0.0746 (12)
H14A0.70390.35040.20190.090*
C150.8905 (6)0.3860 (5)0.2170 (3)0.0957 (16)
H15A0.87690.45700.22760.115*
C161.0101 (6)0.3470 (6)0.2175 (3)0.0932 (16)
H16A1.07920.39030.22950.112*
C171.0312 (4)0.2451 (6)0.2006 (2)0.0876 (16)
H17A1.11510.21870.19990.105*
C180.9281 (4)0.1789 (4)0.18401 (19)0.0703 (12)
H18A0.94310.10830.17290.084*
C190.4730 (3)0.1625 (3)0.12549 (18)0.0550 (8)
H19A0.46480.08590.12600.066*
H19B0.42300.18930.08750.066*
C200.4199 (3)0.2066 (3)0.19045 (18)0.0526 (8)
C210.4156 (5)0.3136 (4)0.2007 (2)0.0720 (11)
H21A0.44410.35930.16670.086*
C220.3696 (6)0.3540 (4)0.2606 (3)0.0910 (15)
H22A0.36730.42700.26690.109*
C230.3276 (5)0.2894 (5)0.3107 (2)0.0842 (14)
H23A0.29650.31760.35130.101*
C240.3312 (4)0.1839 (4)0.3014 (2)0.0763 (12)
H24A0.30350.13890.33590.092*
C250.3757 (4)0.1418 (4)0.24092 (19)0.0642 (10)
H25A0.37550.06870.23450.077*
C260.7075 (5)0.6293 (3)0.0485 (2)0.0730 (13)
C270.8116 (6)0.6202 (4)0.0991 (3)0.1046 (19)
H27A0.89240.60880.07620.157*
H27B0.81630.68440.12530.157*
H27C0.79420.56150.12880.157*
C280.5792 (6)0.6473 (5)0.0832 (4)0.107 (2)
H28A0.51240.65310.04950.161*
H28B0.56070.58870.11290.161*
H28C0.58290.71150.10940.161*
C290.7249 (7)0.7129 (5)0.0026 (3)0.1113 (19)*
H29A0.80610.70300.02540.167*
H29B0.65610.70950.03530.167*
H29C0.72410.78090.01940.167*
O10.6583 (4)0.4231 (2)0.09140 (14)0.0879 (11)
O20.5050 (3)0.2509 (2)0.02216 (13)0.0625 (7)
H2C0.49260.29700.05090.094*
O30.7013 (4)0.53268 (18)0.00702 (12)0.0727 (8)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N10.0446 (14)0.0442 (14)0.0446 (13)0.0030 (12)0.0014 (11)0.0045 (11)
C10.065 (2)0.0403 (16)0.0526 (18)0.0000 (15)0.0029 (17)0.0012 (14)
C20.0621 (19)0.0396 (15)0.0503 (16)0.0026 (15)0.0010 (16)0.0036 (13)
C30.0478 (16)0.0410 (14)0.0456 (15)0.0009 (13)0.0025 (13)0.0021 (12)
C40.0422 (15)0.0345 (14)0.0489 (16)0.0001 (12)0.0048 (13)0.0029 (12)
C50.061 (2)0.0375 (15)0.0580 (18)0.0043 (15)0.0063 (17)0.0017 (14)
C60.074 (2)0.0312 (14)0.0501 (17)0.0038 (15)0.0019 (18)0.0024 (12)
C70.072 (2)0.0510 (18)0.059 (2)0.0003 (18)0.002 (2)0.0074 (16)
C80.083 (3)0.054 (2)0.075 (3)0.004 (2)0.014 (2)0.008 (2)
C90.116 (4)0.062 (2)0.056 (2)0.005 (3)0.017 (3)0.0034 (19)
C100.121 (4)0.080 (3)0.0441 (19)0.004 (3)0.010 (2)0.0084 (19)
C110.086 (3)0.062 (2)0.061 (2)0.002 (2)0.014 (2)0.0028 (19)
C120.060 (2)0.062 (2)0.0466 (16)0.0000 (18)0.0041 (16)0.0150 (15)
C130.0527 (19)0.075 (2)0.0327 (14)0.0018 (17)0.0008 (14)0.0111 (15)
C140.064 (2)0.088 (3)0.073 (2)0.000 (2)0.011 (2)0.009 (2)
C150.089 (4)0.103 (4)0.096 (3)0.016 (3)0.019 (3)0.016 (3)
C160.077 (3)0.122 (5)0.081 (3)0.024 (3)0.016 (3)0.003 (3)
C170.053 (2)0.142 (5)0.068 (3)0.000 (3)0.006 (2)0.010 (3)
C180.060 (2)0.099 (3)0.051 (2)0.013 (2)0.0036 (17)0.007 (2)
C190.0502 (19)0.062 (2)0.0527 (18)0.0059 (17)0.0036 (15)0.0059 (16)
C200.0439 (18)0.065 (2)0.0486 (17)0.0009 (15)0.0017 (14)0.0002 (16)
C210.084 (3)0.061 (2)0.072 (2)0.012 (2)0.017 (2)0.002 (2)
C220.109 (4)0.076 (3)0.089 (3)0.020 (3)0.011 (3)0.014 (3)
C230.088 (3)0.104 (4)0.060 (2)0.016 (3)0.010 (2)0.010 (2)
C240.070 (3)0.107 (4)0.0512 (19)0.003 (3)0.0070 (19)0.013 (2)
C250.063 (2)0.070 (2)0.060 (2)0.0003 (19)0.0031 (18)0.0049 (18)
C260.119 (4)0.0343 (16)0.066 (2)0.003 (2)0.014 (3)0.0088 (16)
C270.118 (4)0.066 (3)0.130 (4)0.009 (3)0.041 (4)0.038 (3)
C280.117 (5)0.073 (3)0.133 (5)0.025 (3)0.020 (4)0.039 (3)
O10.146 (3)0.0575 (15)0.0606 (16)0.0178 (19)0.0189 (19)0.0101 (13)
O20.0556 (14)0.0679 (16)0.0641 (14)0.0043 (13)0.0088 (12)0.0148 (13)
O30.124 (2)0.0402 (13)0.0540 (14)0.0125 (14)0.0015 (17)0.0066 (10)
Geometric parameters (Å, º) top
N1—C121.454 (4)C15—C161.333 (8)
N1—C191.456 (4)C15—H15A0.9300
N1—C41.460 (4)C16—C171.345 (8)
C1—O11.189 (4)C16—H16A0.9300
C1—O31.295 (4)C17—C181.394 (7)
C1—C21.497 (5)C17—H17A0.9300
C2—C31.498 (5)C18—H18A0.9300
C2—H2A0.9700C19—C201.497 (5)
C2—H2B0.9700C19—H19A0.9700
C3—O21.413 (4)C19—H19B0.9700
C3—C41.521 (4)C20—C251.364 (5)
C3—H3A0.9800C20—C211.365 (6)
C4—C51.518 (4)C21—C221.368 (6)
C4—H4A0.9800C21—H21A0.9300
C5—C61.497 (5)C22—C231.350 (7)
C5—H5A0.9700C22—H22A0.9300
C5—H5B0.9700C23—C241.344 (7)
C6—C111.366 (5)C23—H23A0.9300
C6—C71.376 (6)C24—C251.380 (6)
C7—C81.381 (6)C24—H24A0.9300
C7—H7A0.9300C25—H25A0.9300
C8—C91.337 (6)C26—O31.467 (4)
C8—H8A0.9300C26—C291.467 (7)
C9—C101.349 (8)C26—C271.471 (7)
C9—H9A0.9300C26—C281.510 (9)
C10—C111.390 (7)C27—H27A0.9600
C10—H10A0.9300C27—H27B0.9600
C11—H11A0.9300C27—H27C0.9600
C12—C131.490 (6)C28—H28A0.9600
C12—H12A0.9700C28—H28B0.9600
C12—H12B0.9700C28—H28C0.9600
C13—C181.365 (6)C29—H29A0.9600
C13—C141.374 (6)C29—H29B0.9600
C14—C151.376 (7)C29—H29C0.9600
C14—H14A0.9300O2—H2C0.8200
C12—N1—C19112.7 (3)C16—C15—H15A119.7
C12—N1—C4110.3 (3)C14—C15—H15A119.7
C19—N1—C4114.5 (3)C15—C16—C17120.1 (5)
O1—C1—O3124.9 (3)C15—C16—H16A119.9
O1—C1—C2123.9 (3)C17—C16—H16A119.9
O3—C1—C2111.1 (3)C16—C17—C18120.4 (5)
C1—C2—C3113.4 (3)C16—C17—H17A119.8
C1—C2—H2A108.9C18—C17—H17A119.8
C3—C2—H2A108.9C13—C18—C17120.0 (5)
C1—C2—H2B108.9C13—C18—H18A120.0
C3—C2—H2B108.9C17—C18—H18A120.0
H2A—C2—H2B107.7N1—C19—C20111.6 (3)
O2—C3—C2111.3 (3)N1—C19—H19A109.3
O2—C3—C4109.8 (3)C20—C19—H19A109.3
C2—C3—C4111.1 (3)N1—C19—H19B109.3
O2—C3—H3A108.2C20—C19—H19B109.3
C2—C3—H3A108.2H19A—C19—H19B108.0
C4—C3—H3A108.2C25—C20—C21118.3 (4)
N1—C4—C5113.4 (2)C25—C20—C19121.3 (4)
N1—C4—C3113.4 (2)C21—C20—C19120.3 (4)
C5—C4—C3112.1 (3)C20—C21—C22120.4 (5)
N1—C4—H4A105.7C20—C21—H21A119.8
C5—C4—H4A105.7C22—C21—H21A119.8
C3—C4—H4A105.7C23—C22—C21120.9 (5)
C6—C5—C4115.7 (3)C23—C22—H22A119.5
C6—C5—H5A108.4C21—C22—H22A119.5
C4—C5—H5A108.4C24—C23—C22119.3 (4)
C6—C5—H5B108.4C24—C23—H23A120.3
C4—C5—H5B108.4C22—C23—H23A120.3
H5A—C5—H5B107.4C23—C24—C25120.5 (4)
C11—C6—C7117.7 (4)C23—C24—H24A119.7
C11—C6—C5120.8 (4)C25—C24—H24A119.7
C7—C6—C5121.3 (3)C20—C25—C24120.4 (4)
C6—C7—C8121.2 (4)C20—C25—H25A119.8
C6—C7—H7A119.4C24—C25—H25A119.8
C8—C7—H7A119.4O3—C26—C29102.9 (4)
C9—C8—C7120.3 (5)O3—C26—C27110.0 (4)
C9—C8—H8A119.8C29—C26—C27115.3 (5)
C7—C8—H8A119.8O3—C26—C28109.7 (4)
C8—C9—C10119.6 (4)C29—C26—C28108.0 (5)
C8—C9—H9A120.2C27—C26—C28110.6 (4)
C10—C9—H9A120.2C26—C27—H27A109.5
C9—C10—C11121.1 (4)C26—C27—H27B109.5
C9—C10—H10A119.4H27A—C27—H27B109.5
C11—C10—H10A119.4C26—C27—H27C109.5
C6—C11—C10120.0 (5)H27A—C27—H27C109.5
C6—C11—H11A120.0H27B—C27—H27C109.5
C10—C11—H11A120.0C26—C28—H28A109.5
N1—C12—C13113.2 (3)C26—C28—H28B109.5
N1—C12—H12A108.9H28A—C28—H28B109.5
C13—C12—H12A108.9C26—C28—H28C109.5
N1—C12—H12B108.9H28A—C28—H28C109.5
C13—C12—H12B108.9H28B—C28—H28C109.5
H12A—C12—H12B107.8C26—C29—H29A109.5
C18—C13—C14118.1 (4)C26—C29—H29B109.5
C18—C13—C12122.1 (4)H29A—C29—H29B109.5
C14—C13—C12119.8 (4)C26—C29—H29C109.5
C13—C14—C15120.7 (5)H29A—C29—H29C109.5
C13—C14—H14A119.7H29B—C29—H29C109.5
C15—C14—H14A119.7C3—O2—H2C109.5
C16—C15—C14120.7 (6)C1—O3—C26122.7 (3)
O1—C1—C2—C39.7 (6)N1—C12—C13—C1455.9 (5)
O3—C1—C2—C3173.0 (3)C18—C13—C14—C150.5 (6)
C1—C2—C3—O265.4 (4)C12—C13—C14—C15177.6 (4)
C1—C2—C3—C4171.9 (3)C13—C14—C15—C161.2 (8)
C12—N1—C4—C585.0 (3)C14—C15—C16—C171.7 (9)
C19—N1—C4—C543.4 (4)C15—C16—C17—C181.5 (8)
C12—N1—C4—C3145.7 (3)C14—C13—C18—C170.3 (6)
C19—N1—C4—C385.9 (3)C12—C13—C18—C17177.3 (4)
O2—C3—C4—N171.8 (3)C16—C17—C18—C130.8 (7)
C2—C3—C4—N151.7 (4)C12—N1—C19—C2061.7 (4)
O2—C3—C4—C558.1 (4)C4—N1—C19—C20171.1 (3)
C2—C3—C4—C5178.4 (3)N1—C19—C20—C25117.7 (4)
N1—C4—C5—C6165.3 (3)N1—C19—C20—C2161.7 (5)
C3—C4—C5—C664.8 (4)C25—C20—C21—C220.9 (7)
C4—C5—C6—C11126.9 (4)C19—C20—C21—C22178.6 (4)
C4—C5—C6—C757.5 (4)C20—C21—C22—C230.1 (8)
C11—C6—C7—C80.8 (6)C21—C22—C23—C240.0 (9)
C5—C6—C7—C8175.0 (3)C22—C23—C24—C250.9 (8)
C6—C7—C8—C90.1 (6)C21—C20—C25—C241.7 (6)
C7—C8—C9—C100.6 (7)C19—C20—C25—C24177.7 (4)
C8—C9—C10—C110.6 (8)C23—C24—C25—C201.7 (7)
C7—C6—C11—C100.8 (6)O1—C1—O3—C261.0 (7)
C5—C6—C11—C10175.0 (4)C2—C1—O3—C26178.3 (4)
C9—C10—C11—C60.1 (7)C29—C26—O3—C1174.8 (5)
C19—N1—C12—C13149.2 (3)C27—C26—O3—C161.9 (6)
C4—N1—C12—C1381.5 (4)C28—C26—O3—C160.0 (6)
N1—C12—C13—C18127.1 (4)
 

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