organic compounds
In the title compound, C11H12N2O4S, the thiazole ring is nearly planar. The 1,3-dioxane-4,6-dione ring exhibits a half-chair conformation. The NH group forms an intramolecular contact to a carbonyl O atom, forming a six-membered ring, and an intermolecular N—HO hydrogen bond, with an HO distance of 2.16 Å, is also observed.
Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536806006064/hg2006sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536806006064/hg2006Isup2.hkl |
CCDC reference: 601180
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.003 Å
- R factor = 0.042
- wR factor = 0.125
- Data-to-parameter ratio = 13.2
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT152_ALERT_1_C Supplied and Calc Volume s.u. Inconsistent ..... ? PLAT199_ALERT_1_C Check the Reported _cell_measurement_temperature 293 K PLAT200_ALERT_1_C Check the Reported _diffrn_ambient_temperature . 293 K PLAT322_ALERT_2_C Check Hybridisation of S15 in Main Residue . ? PLAT380_ALERT_4_C Check Incorrectly? Oriented X(sp2)-Methyl Moiety C16
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 5 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 3 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion
Computing details top
Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1993); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: SHELXL97.
5-[(4-Methylthiazol-2-ylamino)methylene]-2,2-dimethyl-1,3-dioxane-4,6-dione top
Crystal data top
C11H12N2O4S | F(000) = 560 |
Mr = 268.29 | Dx = 1.467 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
a = 5.6384 (6) Å | θ = 9.0–18.1° |
b = 18.562 (4) Å | µ = 0.28 mm−1 |
c = 11.920 (2) Å | T = 293 K |
β = 103.14 (1)° | Irregular block, yellow |
V = 1214.9 (3) Å3 | 0.36 × 0.26 × 0.23 mm |
Z = 4 |
Data collection top
Enraf–Nonius CAD-4 diffractometer | Rint = 0.024 |
Radiation source: fine-focus sealed tube | θmax = 25.1°, θmin = 2.1° |
Graphite monochromator | h = −6→6 |
ω–2θ scans | k = −22→0 |
2249 measured reflections | l = −14→0 |
2144 independent reflections | 3 standard reflections every 200 reflections |
1590 reflections with I > 2σ(I) | intensity decay: 1% |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.042 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.125 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0636P)2 + 0.5695P] where P = (Fo2 + 2Fc2)/3 |
2144 reflections | (Δ/σ)max < 0.001 |
163 parameters | Δρmax = 0.33 e Å−3 |
0 restraints | Δρmin = −0.30 e Å−3 |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
x | y | z | Uiso*/Ueq | ||
N1 | 0.6130 (4) | 0.44825 (11) | 0.87611 (17) | 0.0399 (5) | |
H1 | 0.7383 | 0.4752 | 0.9159 | 0.048* | |
C2 | 0.6299 (4) | 0.37706 (13) | 0.8750 (2) | 0.0378 (6) | |
H2 | 0.4930 | 0.3525 | 0.8348 | 0.045* | |
C3 | 0.8251 (4) | 0.33528 (12) | 0.9259 (2) | 0.0354 (5) | |
C4 | 1.0554 (4) | 0.36429 (13) | 0.9873 (2) | 0.0366 (6) | |
O1 | 1.1004 (3) | 0.42787 (9) | 1.00060 (16) | 0.0494 (5) | |
O5 | 1.2340 (3) | 0.31578 (9) | 1.02803 (15) | 0.0410 (4) | |
C6 | 1.1603 (4) | 0.24468 (12) | 1.0553 (2) | 0.0356 (5) | |
O7 | 0.9850 (3) | 0.21605 (8) | 0.95918 (14) | 0.0392 (4) | |
C8 | 0.8004 (4) | 0.25821 (12) | 0.90271 (19) | 0.0349 (5) | |
O2 | 0.6342 (3) | 0.22923 (9) | 0.83563 (15) | 0.0486 (5) | |
C9 | 1.0561 (4) | 0.24834 (14) | 1.1612 (2) | 0.0438 (6) | |
H9A | 1.1763 | 0.2675 | 1.2244 | 0.066* | |
H9B | 1.0105 | 0.2009 | 1.1803 | 0.066* | |
H9C | 0.9153 | 0.2790 | 1.1462 | 0.066* | |
C10 | 1.3805 (4) | 0.19698 (15) | 1.0695 (2) | 0.0469 (6) | |
H10A | 1.5046 | 0.2137 | 1.1332 | 0.070* | |
H10B | 1.4409 | 0.1984 | 1.0004 | 0.070* | |
H10C | 1.3366 | 0.1484 | 1.0837 | 0.070* | |
C11 | 0.4052 (4) | 0.48290 (13) | 0.8106 (2) | 0.0376 (6) | |
N12 | 0.2238 (4) | 0.44823 (11) | 0.74848 (17) | 0.0410 (5) | |
C13 | 0.0511 (5) | 0.49624 (14) | 0.6908 (2) | 0.0417 (6) | |
C14 | 0.1091 (5) | 0.56560 (15) | 0.7109 (2) | 0.0560 (8) | |
H14 | 0.0108 | 0.6039 | 0.6785 | 0.067* | |
S15 | 0.38807 (14) | 0.57493 (4) | 0.80431 (7) | 0.0602 (3) | |
C16 | −0.1768 (5) | 0.46762 (17) | 0.6123 (3) | 0.0599 (8) | |
H16A | −0.1738 | 0.4159 | 0.6137 | 0.090* | |
H16B | −0.1854 | 0.4842 | 0.5351 | 0.090* | |
H16C | −0.3165 | 0.4845 | 0.6379 | 0.090* |
Atomic displacement parameters (Å2) top
U11 | U22 | U33 | U12 | U13 | U23 | |
N1 | 0.0418 (12) | 0.0322 (11) | 0.0404 (12) | −0.0011 (9) | −0.0014 (9) | 0.0001 (9) |
C2 | 0.0420 (13) | 0.0341 (13) | 0.0345 (13) | −0.0016 (10) | 0.0032 (11) | 0.0000 (10) |
C3 | 0.0388 (13) | 0.0306 (12) | 0.0336 (12) | −0.0023 (10) | 0.0015 (10) | 0.0009 (10) |
C4 | 0.0410 (13) | 0.0309 (13) | 0.0363 (13) | −0.0020 (11) | 0.0057 (10) | 0.0009 (10) |
O1 | 0.0536 (11) | 0.0312 (10) | 0.0572 (12) | −0.0080 (8) | −0.0001 (9) | −0.0031 (8) |
O5 | 0.0329 (8) | 0.0332 (9) | 0.0523 (11) | −0.0061 (7) | 0.0002 (8) | 0.0023 (8) |
C6 | 0.0338 (12) | 0.0326 (12) | 0.0358 (13) | −0.0029 (10) | −0.0014 (10) | 0.0008 (10) |
O7 | 0.0420 (9) | 0.0294 (9) | 0.0396 (10) | 0.0003 (7) | −0.0043 (8) | −0.0026 (7) |
C8 | 0.0369 (12) | 0.0331 (12) | 0.0317 (12) | −0.0026 (10) | 0.0020 (10) | 0.0000 (10) |
O2 | 0.0498 (11) | 0.0390 (10) | 0.0455 (10) | −0.0048 (8) | −0.0133 (9) | −0.0043 (8) |
C9 | 0.0416 (14) | 0.0475 (15) | 0.0397 (14) | −0.0024 (12) | 0.0038 (11) | 0.0006 (12) |
C10 | 0.0397 (14) | 0.0443 (15) | 0.0538 (16) | 0.0066 (11) | 0.0048 (12) | 0.0033 (12) |
C11 | 0.0426 (14) | 0.0327 (13) | 0.0350 (13) | 0.0019 (11) | 0.0033 (11) | 0.0004 (10) |
N12 | 0.0443 (12) | 0.0353 (11) | 0.0406 (12) | 0.0011 (9) | 0.0039 (10) | 0.0007 (9) |
C13 | 0.0422 (14) | 0.0437 (15) | 0.0358 (13) | 0.0034 (11) | 0.0021 (11) | 0.0003 (11) |
C14 | 0.0591 (18) | 0.0411 (16) | 0.0558 (18) | 0.0110 (13) | −0.0115 (14) | 0.0041 (13) |
S15 | 0.0642 (5) | 0.0322 (4) | 0.0689 (5) | 0.0031 (3) | −0.0171 (4) | −0.0032 (3) |
C16 | 0.0512 (17) | 0.064 (2) | 0.0574 (18) | −0.0005 (14) | −0.0027 (14) | −0.0019 (15) |
Geometric parameters (Å, º) top
N1—C2 | 1.325 (3) | C9—H9B | 0.9600 |
N1—C11 | 1.407 (3) | C9—H9C | 0.9600 |
N1—H1 | 0.9063 | C10—H10A | 0.9600 |
C2—C3 | 1.370 (3) | C10—H10B | 0.9600 |
C2—H2 | 0.9300 | C10—H10C | 0.9600 |
C3—C4 | 1.442 (3) | C11—N12 | 1.290 (3) |
C3—C8 | 1.458 (3) | C11—S15 | 1.712 (2) |
C4—O1 | 1.210 (3) | N12—C13 | 1.382 (3) |
C4—O5 | 1.356 (3) | C13—C14 | 1.337 (4) |
O5—C6 | 1.443 (3) | C13—C16 | 1.504 (3) |
C6—O7 | 1.435 (3) | C14—S15 | 1.717 (3) |
C6—C10 | 1.503 (3) | C14—H14 | 0.9300 |
C6—C9 | 1.510 (3) | C16—H16A | 0.9600 |
O7—C8 | 1.353 (3) | C16—H16B | 0.9600 |
C8—O2 | 1.211 (3) | C16—H16C | 0.9600 |
C9—H9A | 0.9600 | ||
C2—N1—C11 | 120.2 (2) | C6—C9—H9C | 109.5 |
C2—N1—H1 | 120.4 | H9A—C9—H9C | 109.5 |
C11—N1—H1 | 119.4 | H9B—C9—H9C | 109.5 |
N1—C2—C3 | 127.8 (2) | C6—C10—H10A | 109.5 |
N1—C2—H2 | 116.1 | C6—C10—H10B | 109.5 |
C3—C2—H2 | 116.1 | H10A—C10—H10B | 109.5 |
C2—C3—C4 | 123.6 (2) | C6—C10—H10C | 109.5 |
C2—C3—C8 | 116.0 (2) | H10A—C10—H10C | 109.5 |
C4—C3—C8 | 119.9 (2) | H10B—C10—H10C | 109.5 |
O1—C4—O5 | 119.0 (2) | N12—C11—N1 | 122.8 (2) |
O1—C4—C3 | 124.7 (2) | N12—C11—S15 | 116.30 (18) |
O5—C4—C3 | 116.3 (2) | N1—C11—S15 | 120.81 (18) |
C4—O5—C6 | 117.34 (17) | C11—N12—C13 | 109.9 (2) |
O7—C6—O5 | 109.89 (17) | C14—C13—N12 | 114.6 (2) |
O7—C6—C10 | 105.8 (2) | C14—C13—C16 | 126.3 (2) |
O5—C6—C10 | 106.91 (19) | N12—C13—C16 | 119.2 (2) |
O7—C6—C9 | 110.87 (19) | C13—C14—S15 | 111.4 (2) |
O5—C6—C9 | 109.5 (2) | C13—C14—H14 | 124.3 |
C10—C6—C9 | 113.7 (2) | S15—C14—H14 | 124.3 |
C8—O7—C6 | 119.71 (18) | C11—S15—C14 | 87.83 (13) |
O2—C8—O7 | 117.6 (2) | C13—C16—H16A | 109.5 |
O2—C8—C3 | 126.0 (2) | C13—C16—H16B | 109.5 |
O7—C8—C3 | 116.35 (19) | H16A—C16—H16B | 109.5 |
C6—C9—H9A | 109.5 | C13—C16—H16C | 109.5 |
C6—C9—H9B | 109.5 | H16A—C16—H16C | 109.5 |
H9A—C9—H9B | 109.5 | H16B—C16—H16C | 109.5 |
C11—N1—C2—C3 | 174.5 (2) | C6—O7—C8—C3 | 14.4 (3) |
N1—C2—C3—C4 | −2.7 (4) | C2—C3—C8—O2 | 6.7 (4) |
N1—C2—C3—C8 | −175.1 (2) | C4—C3—C8—O2 | −165.9 (2) |
C2—C3—C4—O1 | 0.2 (4) | C2—C3—C8—O7 | −175.5 (2) |
C8—C3—C4—O1 | 172.3 (2) | C4—C3—C8—O7 | 11.9 (3) |
C2—C3—C4—O5 | −176.9 (2) | C2—N1—C11—N12 | 0.7 (4) |
C8—C3—C4—O5 | −4.8 (3) | C2—N1—C11—S15 | −176.10 (19) |
O1—C4—O5—C6 | 154.7 (2) | N1—C11—N12—C13 | −177.8 (2) |
C3—C4—O5—C6 | −28.0 (3) | S15—C11—N12—C13 | −0.8 (3) |
C4—O5—C6—O7 | 51.8 (3) | C11—N12—C13—C14 | 0.4 (3) |
C4—O5—C6—C10 | 166.2 (2) | C11—N12—C13—C16 | 179.7 (2) |
C4—O5—C6—C9 | −70.2 (2) | N12—C13—C14—S15 | 0.2 (3) |
O5—C6—O7—C8 | −44.6 (3) | C16—C13—C14—S15 | −179.0 (2) |
C10—C6—O7—C8 | −159.7 (2) | N12—C11—S15—C14 | 0.8 (2) |
C9—C6—O7—C8 | 76.6 (3) | N1—C11—S15—C14 | 177.8 (2) |
C6—O7—C8—O2 | −167.6 (2) | C13—C14—S15—C11 | −0.6 (2) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1 | 0.91 | 2.24 | 2.836 (3) | 123 |
N1—H1···O1i | 0.91 | 2.16 | 2.996 (3) | 154 |
Symmetry code: (i) −x+2, −y+1, −z+2. |