The title compound, [Li(C6H5O3Se)(H2O)3], shows an extensive hydrogen-bonding network in the solid state, forming complex layers parallel to the crystallographic bc plane. The interlayer distance is 11.336 (12) Å. The molecules pack in an alternating up-down fashion in the plane of the layers so that the SeO3 and Li(H2O)3 groups are adjacent, creating a double net of hydrogen bonding between the two groups. Each of the six H atoms of the water molecules forms hydrogen bonds, with five to O atoms of the phenylselenonate and one to the O atom of a neighboring water molecule. The Li cation has a tetrahedral geometry formed by one O atom of the phenylselenonate anion and three water molecules. The Li-O distances are in the range 1.896 (8)-1.921 (9) Å to the water molecules and 1.988 (8) Å to the phenylselenonate.
Supporting information
CCDC reference: 601261
Key indicators
- Single-crystal X-ray study
- T = 296 K
- Mean (C-C) = 0.008 Å
- R factor = 0.042
- wR factor = 0.088
- Data-to-parameter ratio = 14.2
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT061_ALERT_3_C Tmax/Tmin Range Test RR' too Large ............. 0.89
PLAT331_ALERT_2_C Small Average Phenyl C-C Dist. C1 -C6 1.37 Ang.
PLAT341_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 8
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
3 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
1 ALERT type 2 Indicator that the structure model may be wrong or deficient
2 ALERT type 3 Indicator that the structure quality may be low
0 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: COSMO/APEX2/BIS (Bruker, 2004); cell refinement: SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: WinGX (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
triaqua(phenylselenonato)lithium(I)
top
Crystal data top
[Li(C6H5O3Se)(H2O)3] | F(000) = 528 |
Mr = 265.05 | Dx = 1.657 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 872 reflections |
a = 11.3410 (11) Å | θ = 3.2–19.0° |
b = 7.6180 (8) Å | µ = 3.53 mm−1 |
c = 12.3021 (13) Å | T = 296 K |
β = 91.720 (6)° | Plate, colourless |
V = 1062.37 (19) Å3 | 0.10 × 0.10 × 0.02 mm |
Z = 4 | |
Data collection top
Bruker Model? CCD area-detector diffractometer | 1364 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.082 |
φ and ω scans | θmax = 26.4°, θmin = 3.2° |
Absorption correction: multi-scan (SADABS; Bruker, 2004); tramsmission factors rescaled by 0.93 | h = −14→14 |
Tmin = 0.63, Tmax = 0.93 | k = −9→9 |
8507 measured reflections | l = −15→14 |
2147 independent reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.042 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.088 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.99 | w = 1/[σ2(Fo2) + (0.0351P)2] where P = (Fo2 + 2Fc2)/3 |
2147 reflections | (Δ/σ)max = 0.001 |
151 parameters | Δρmax = 0.66 e Å−3 |
9 restraints | Δρmin = −0.58 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Li1 | 0.5530 (6) | 0.3183 (11) | 0.3927 (6) | 0.040 (2) | |
Se1 | 0.28611 (4) | 0.19615 (6) | 0.43954 (4) | 0.03132 (16) | |
O1 | 0.3781 (2) | 0.3371 (4) | 0.3904 (3) | 0.0418 (9) | |
O2 | 0.3005 (3) | 0.1756 (4) | 0.5705 (2) | 0.0457 (9) | |
O3 | 0.2967 (2) | 0.0080 (4) | 0.3781 (2) | 0.0405 (9) | |
C1 | 0.1319 (4) | 0.2792 (6) | 0.4075 (4) | 0.0359 (11) | |
C2 | 0.0440 (4) | 0.2343 (7) | 0.4751 (5) | 0.0558 (16) | |
H2 | 0.0615 | 0.1732 | 0.5391 | 0.067* | |
C3 | −0.0711 (5) | 0.2798 (9) | 0.4484 (6) | 0.080 (2) | |
H3 | −0.1322 | 0.2475 | 0.4931 | 0.096* | |
C4 | −0.0935 (6) | 0.3723 (10) | 0.3560 (7) | 0.086 (2) | |
H4 | −0.1707 | 0.4051 | 0.3383 | 0.103* | |
C6 | 0.1090 (4) | 0.3711 (7) | 0.3137 (4) | 0.0529 (15) | |
H6 | 0.1696 | 0.4009 | 0.2679 | 0.064* | |
C5 | −0.0060 (5) | 0.4185 (9) | 0.2885 (6) | 0.079 (2) | |
H5 | −0.0237 | 0.4819 | 0.2255 | 0.095* | |
O1W | 0.5941 (3) | 0.5316 (5) | 0.3196 (3) | 0.0414 (9) | |
O2W | 0.6273 (4) | 0.3093 (7) | 0.5327 (3) | 0.0570 (10) | |
O3W | 0.6102 (3) | 0.1208 (5) | 0.3143 (3) | 0.0536 (10) | |
H11 | 0.614 (4) | 0.626 (5) | 0.349 (4) | 0.06 (2)* | |
H12 | 0.634 (5) | 0.520 (7) | 0.262 (3) | 0.10 (2)* | |
H21 | 0.639 (4) | 0.394 (4) | 0.569 (4) | 0.052 (19)* | |
H22 | 0.647 (4) | 0.214 (4) | 0.560 (4) | 0.057 (18)* | |
H31 | 0.556 (4) | 0.082 (8) | 0.272 (4) | 0.12 (3)* | |
H32 | 0.633 (4) | 0.040 (6) | 0.355 (4) | 0.06 (2)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Li1 | 0.040 (4) | 0.044 (6) | 0.035 (5) | 0.001 (4) | 0.006 (3) | −0.001 (4) |
Se1 | 0.0356 (2) | 0.0276 (3) | 0.0307 (3) | 0.0004 (3) | 0.00149 (16) | 0.0001 (3) |
O1 | 0.0341 (16) | 0.033 (3) | 0.058 (2) | −0.0032 (14) | 0.0066 (15) | 0.0048 (16) |
O2 | 0.062 (2) | 0.048 (3) | 0.0272 (19) | 0.0026 (18) | −0.0028 (15) | 0.0001 (15) |
O3 | 0.058 (2) | 0.028 (2) | 0.035 (2) | 0.0067 (17) | 0.0043 (16) | −0.0020 (14) |
C1 | 0.037 (2) | 0.033 (3) | 0.038 (3) | 0.002 (2) | 0.001 (2) | −0.005 (2) |
C2 | 0.051 (3) | 0.052 (4) | 0.065 (4) | −0.001 (3) | 0.013 (3) | 0.008 (3) |
C3 | 0.047 (3) | 0.080 (6) | 0.113 (6) | 0.001 (4) | 0.018 (4) | −0.003 (5) |
C4 | 0.046 (4) | 0.097 (7) | 0.115 (7) | 0.027 (4) | −0.003 (4) | −0.002 (5) |
C6 | 0.052 (3) | 0.054 (4) | 0.052 (4) | 0.016 (3) | 0.007 (3) | 0.013 (3) |
C5 | 0.066 (4) | 0.085 (6) | 0.084 (5) | 0.026 (4) | −0.012 (4) | 0.019 (4) |
O1W | 0.055 (2) | 0.035 (3) | 0.034 (2) | −0.0052 (19) | 0.0059 (18) | 0.0012 (17) |
O2W | 0.086 (3) | 0.040 (3) | 0.044 (2) | 0.014 (3) | −0.0128 (19) | 0.000 (2) |
O3W | 0.060 (2) | 0.048 (3) | 0.053 (3) | 0.010 (2) | −0.013 (2) | −0.008 (2) |
Geometric parameters (Å, º) top
Li1—O1W | 1.921 (9) | C3—H3 | 0.9300 |
Li1—O2W | 1.896 (8) | C4—C5 | 1.359 (8) |
Li1—O3W | 1.911 (9) | C4—H4 | 0.9300 |
Li1—O1 | 1.988 (8) | C6—C5 | 1.380 (7) |
Se1—O1 | 1.626 (3) | C6—H6 | 0.9300 |
Se1—O2 | 1.622 (3) | C5—H5 | 0.9300 |
Se1—O3 | 1.627 (3) | O1W—H11 | 0.83 (3) |
Se1—C1 | 1.890 (4) | O1W—H12 | 0.86 (3) |
C1—C2 | 1.362 (6) | O2W—H21 | 0.80 (2) |
C1—C6 | 1.367 (6) | O2W—H22 | 0.83 (2) |
C2—C3 | 1.381 (7) | O3W—H31 | 0.85 (3) |
C2—H2 | 0.9300 | O3W—H32 | 0.83 (3) |
C3—C4 | 1.356 (9) | | |
| | | |
O2W—Li1—O1W | 110.4 (4) | C4—C3—H3 | 120.6 |
O3W—Li1—O1W | 109.8 (4) | C2—C3—H3 | 120.6 |
O2W—Li1—O3W | 106.3 (4) | C3—C4—C5 | 121.7 (6) |
O2W—Li1—O1 | 115.6 (4) | C3—C4—H4 | 119.2 |
O3W—Li1—O1 | 113.8 (4) | C5—C4—H4 | 119.2 |
O1W—Li1—O1 | 100.8 (4) | C1—C6—C5 | 118.6 (5) |
O2—Se1—O1 | 112.75 (16) | C1—C6—H6 | 120.7 |
O2—Se1—O3 | 111.74 (16) | C5—C6—H6 | 120.7 |
O1—Se1—O3 | 110.58 (16) | C4—C5—C6 | 119.8 (6) |
O2—Se1—C1 | 107.72 (18) | C4—C5—H5 | 120.1 |
O1—Se1—C1 | 107.51 (18) | C6—C5—H5 | 120.1 |
O3—Se1—C1 | 106.19 (18) | Li1—O1W—H11 | 127 (4) |
Se1—O1—Li1 | 126.7 (3) | Li1—O1W—H12 | 116 (4) |
C2—C1—C6 | 121.4 (5) | H11—O1W—H12 | 107 (4) |
C2—C1—Se1 | 118.5 (4) | Li1—O2W—H21 | 123 (3) |
C6—C1—Se1 | 119.9 (4) | Li1—O2W—H22 | 121 (3) |
C1—C2—C3 | 119.7 (6) | H21—O2W—H22 | 116 (4) |
C1—C2—H2 | 120.2 | Li1—O3W—H31 | 109 (4) |
C3—C2—H2 | 120.2 | Li1—O3W—H32 | 113 (4) |
C4—C3—C2 | 118.8 (6) | H31—O3W—H32 | 108 (4) |
| | | |
O2—Se1—O1—Li1 | 64.1 (4) | O1—Se1—C1—C6 | 32.9 (5) |
O3—Se1—O1—Li1 | −61.8 (4) | O3—Se1—C1—C6 | −85.5 (5) |
C1—Se1—O1—Li1 | −177.3 (4) | C6—C1—C2—C3 | 0.9 (9) |
O2W—Li1—O1—Se1 | −61.3 (6) | Se1—C1—C2—C3 | −174.2 (5) |
O3W—Li1—O1—Se1 | 62.2 (5) | C1—C2—C3—C4 | −1.5 (10) |
O1W—Li1—O1—Se1 | 179.7 (3) | C2—C3—C4—C5 | 1.1 (12) |
O2—Se1—C1—C2 | −30.2 (5) | C2—C1—C6—C5 | 0.2 (9) |
O1—Se1—C1—C2 | −151.9 (4) | Se1—C1—C6—C5 | 175.2 (5) |
O3—Se1—C1—C2 | 89.7 (4) | C3—C4—C5—C6 | −0.1 (12) |
O2—Se1—C1—C6 | 154.7 (4) | C1—C6—C5—C4 | −0.6 (10) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H11···O2i | 0.83 (3) | 2.04 (3) | 2.852 (5) | 166 (5) |
O1W—H12···O3ii | 0.86 (3) | 1.91 (3) | 2.767 (5) | 171 (6) |
O2W—H21···O1i | 0.80 (2) | 2.12 (3) | 2.856 (6) | 154 (5) |
O2W—H22···O3iii | 0.83 (2) | 1.96 (3) | 2.781 (6) | 176 (5) |
O3W—H31···O1Wiv | 0.85 (3) | 2.05 (3) | 2.883 (5) | 168 (6) |
O3W—H32···O2iii | 0.83 (3) | 2.02 (3) | 2.836 (5) | 170 (6) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1, y+1/2, −z+1/2; (iii) −x+1, −y, −z+1; (iv) −x+1, y−1/2, −z+1/2. |