Download citation
Download citation
link to html
In the title ion-pair compound, (C16H13N2O2)[Pd(C3S5)2]·C3H6O, the PdIII atom exhibits square-planar coordination geometry involving four S atoms of two 2-thioxo-1,3-dithiole-4,5-dithiol­ate (dmit) ligands. Some weak S...S inter­actions and hydrogen bonds are found, resulting in a three-dimensional supra­molecular network structure.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536806012049/dn2021sup1.cif
Contains datablocks global, I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S1600536806012049/dn2021Isup2.hkl
Contains datablock I

CCDC reference: 608317

Key indicators

  • Single-crystal X-ray study
  • T = 293 K
  • Mean [sigma](C-C) = 0.005 Å
  • R factor = 0.044
  • wR factor = 0.086
  • Data-to-parameter ratio = 16.5

checkCIF/PLATON results

No syntax errors found



Alert level B PLAT230_ALERT_2_B Hirshfeld Test Diff for S7 - C4 .. 7.54 su
Alert level C PLAT199_ALERT_1_C Check the Reported _cell_measurement_temperature 293 K PLAT200_ALERT_1_C Check the Reported _diffrn_ambient_temperature . 293 K PLAT230_ALERT_2_C Hirshfeld Test Diff for N1 - C15 .. 6.12 su PLAT230_ALERT_2_C Hirshfeld Test Diff for N1 - C16 .. 5.10 su PLAT230_ALERT_2_C Hirshfeld Test Diff for S5 - C1 .. 6.88 su PLAT230_ALERT_2_C Hirshfeld Test Diff for S6 - C4 .. 5.52 su PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.15 PLAT362_ALERT_2_C Short C(sp3)-C(sp2) Bond C24 - C25 ... 1.41 Ang.
0 ALERT level A = In general: serious problem 1 ALERT level B = Potentially serious problem 8 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 7 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion

Computing details top

Data collection: SMART (Bruker, 2000); cell refinement: SMART; data reduction: SAINT (Bruker, 2000); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 2000); software used to prepare material for publication: SHELXL97.

N-(4-Nitrobenzyl)quinolinium bis(2-thioxo-1,3-dithiole-4,5-dithiolato)palladium(III) acetone solvate top
Crystal data top
(C16H13N2O2)[Pd(C3S5)2]·C3H6OF(000) = 1652
Mr = 822.54Dx = 1.734 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 700 reflections
a = 12.224 (2) Åθ = 2.7–19.6°
b = 8.0880 (16) ŵ = 1.28 mm1
c = 32.711 (6) ÅT = 293 K
β = 103.015 (6)°Block, black
V = 3151.0 (10) Å30.3 × 0.2 × 0.2 mm
Z = 4
Data collection top
Bruker SMART CCD area-detector
diffractometer
6128 independent reflections
Radiation source: fine-focus sealed tube4753 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.028
φ and ω scansθmax = 26.0°, θmin = 1.9°
Absorption correction: multi-scan
(SADABS; Bruker, 2000)
h = 1411
Tmin = 0.745, Tmax = 0.778k = 99
16294 measured reflectionsl = 4040
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.087H-atom parameters constrained
S = 1.13 w = 1/[σ2(Fo2) + (0.0376P)2 + 0.1449P]
where P = (Fo2 + 2Fc2)/3
6128 reflections(Δ/σ)max = 0.002
372 parametersΔρmax = 0.26 e Å3
0 restraintsΔρmin = 0.64 e Å3
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Pd10.03584 (2)0.34882 (4)0.048986 (8)0.04705 (10)
S40.01433 (8)0.50565 (12)0.10417 (3)0.0497 (2)
C10.2638 (3)0.3498 (6)0.15394 (12)0.0621 (11)
C20.1564 (3)0.2864 (5)0.09482 (11)0.0469 (8)
C30.1018 (3)0.4190 (5)0.11631 (10)0.0480 (9)
C40.3445 (3)0.3579 (5)0.05150 (12)0.0549 (9)
C50.1802 (3)0.2832 (5)0.01678 (10)0.0480 (9)
C60.2312 (3)0.4218 (4)0.00321 (10)0.0445 (8)
C70.2084 (3)0.1703 (5)0.15219 (10)0.0454 (8)
H70.15800.16200.16960.054*
C80.2784 (3)0.3061 (5)0.15580 (11)0.0496 (9)
H80.27320.38840.17510.060*
C90.3520 (3)0.3207 (5)0.13239 (11)0.0501 (9)
H90.40150.40970.13580.060*
C100.3544 (2)0.1969 (4)0.10163 (9)0.0308 (6)
C110.4342 (3)0.2056 (4)0.07464 (10)0.0427 (8)
H110.48540.29210.07750.051*
C120.4333 (3)0.0884 (5)0.04568 (12)0.0557 (10)
H120.48180.09600.02750.067*
C130.3626 (3)0.0398 (5)0.04284 (11)0.0553 (10)
H130.36530.12210.02320.066*
C140.2857 (3)0.0549 (4)0.06775 (10)0.0439 (8)
H140.23560.14300.06430.053*
C150.2853 (2)0.0639 (4)0.09781 (9)0.0381 (7)
C160.1393 (3)0.0977 (4)0.12161 (10)0.0429 (8)
H16A0.18550.19470.12100.052*
H16B0.08310.09390.09540.052*
C170.0807 (3)0.1133 (4)0.15811 (10)0.0414 (8)
C180.0289 (3)0.0655 (5)0.15212 (11)0.0511 (9)
H180.06540.01910.12670.061*
C190.0854 (3)0.0860 (5)0.18379 (11)0.0484 (9)
H190.16010.05360.17990.058*
C200.0327 (3)0.1521 (5)0.21977 (10)0.0489 (9)
C210.0784 (3)0.2019 (6)0.22708 (11)0.0587 (11)
H210.11350.24870.25260.070*
C220.1355 (3)0.1812 (6)0.19611 (11)0.0577 (10)
H220.21050.21230.20050.069*
N10.2113 (2)0.0537 (3)0.12505 (7)0.0340 (6)
N20.0945 (3)0.1755 (4)0.25361 (9)0.0461 (7)
O10.0469 (2)0.2470 (3)0.28494 (7)0.0467 (6)
O20.1845 (2)0.1139 (3)0.25001 (7)0.0505 (6)
S10.34864 (9)0.34368 (15)0.18577 (3)0.0598 (3)
S20.27175 (8)0.21276 (14)0.11235 (3)0.0568 (3)
S30.11606 (8)0.19310 (11)0.05336 (3)0.0486 (2)
S50.15760 (10)0.49045 (14)0.15703 (3)0.0623 (3)
S60.43602 (9)0.35801 (14)0.08128 (3)0.0570 (3)
S70.24008 (9)0.20985 (13)0.05625 (3)0.0585 (3)
S80.06385 (8)0.19247 (12)0.00556 (3)0.0488 (2)
S90.18434 (8)0.51175 (12)0.04435 (3)0.0493 (2)
S100.34512 (8)0.49759 (12)0.01232 (3)0.0531 (2)
O30.38982 (19)0.7369 (3)0.17417 (7)0.0477 (6)
C230.5234 (3)0.7026 (5)0.23489 (12)0.0594 (10)
H23A0.47040.62300.24060.089*
H23B0.53500.78700.25610.089*
H23C0.59340.64870.23500.089*
C240.4787 (3)0.7791 (5)0.19299 (10)0.0462 (8)
C250.5523 (4)0.8809 (5)0.17648 (11)0.0549 (10)
H25A0.61080.81440.16970.082*
H25B0.58480.96250.19690.082*
H25C0.51130.93490.15160.082*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Pd10.05106 (17)0.04236 (16)0.04415 (15)0.00147 (13)0.00319 (11)0.00124 (12)
S40.0532 (5)0.0446 (5)0.0484 (5)0.0021 (4)0.0052 (4)0.0006 (4)
C10.048 (2)0.086 (3)0.058 (2)0.016 (2)0.0241 (18)0.001 (2)
C20.0424 (19)0.043 (2)0.0507 (19)0.0107 (16)0.0010 (16)0.0077 (16)
C30.056 (2)0.050 (2)0.0357 (17)0.0097 (17)0.0065 (15)0.0060 (15)
C40.051 (2)0.050 (2)0.068 (2)0.0209 (18)0.0209 (19)0.0033 (19)
C50.054 (2)0.048 (2)0.0352 (16)0.0183 (17)0.0034 (15)0.0122 (15)
C60.052 (2)0.0402 (19)0.0346 (16)0.0172 (16)0.0047 (14)0.0048 (14)
C70.0464 (19)0.052 (2)0.0444 (18)0.0014 (16)0.0248 (15)0.0179 (16)
C80.052 (2)0.048 (2)0.055 (2)0.0122 (17)0.0259 (18)0.0184 (17)
C90.0378 (18)0.060 (2)0.054 (2)0.0204 (17)0.0136 (16)0.0214 (18)
C100.0233 (14)0.0327 (17)0.0353 (15)0.0007 (12)0.0043 (12)0.0014 (12)
C110.056 (2)0.0367 (18)0.0435 (17)0.0121 (16)0.0281 (16)0.0071 (15)
C120.056 (2)0.069 (3)0.056 (2)0.008 (2)0.0403 (19)0.0079 (19)
C130.071 (3)0.055 (2)0.050 (2)0.007 (2)0.0348 (19)0.0154 (18)
C140.055 (2)0.0397 (19)0.0378 (17)0.0095 (16)0.0126 (15)0.0043 (15)
C150.0272 (15)0.054 (2)0.0310 (15)0.0088 (14)0.0021 (12)0.0001 (14)
C160.048 (2)0.049 (2)0.0372 (16)0.0256 (16)0.0207 (15)0.0034 (15)
C170.0336 (17)0.050 (2)0.0470 (18)0.0226 (15)0.0226 (15)0.0006 (15)
C180.0390 (19)0.068 (3)0.0473 (19)0.0112 (18)0.0118 (16)0.0125 (18)
C190.0273 (16)0.060 (2)0.061 (2)0.0074 (16)0.0149 (16)0.0147 (18)
C200.052 (2)0.061 (2)0.0367 (17)0.0242 (19)0.0160 (16)0.0112 (17)
C210.060 (2)0.082 (3)0.0411 (19)0.006 (2)0.0245 (18)0.0054 (19)
C220.050 (2)0.085 (3)0.0428 (19)0.003 (2)0.0200 (17)0.0014 (19)
N10.0339 (13)0.0394 (15)0.0333 (13)0.0021 (11)0.0175 (11)0.0006 (11)
N20.0500 (18)0.0490 (18)0.0422 (16)0.0298 (15)0.0166 (14)0.0033 (14)
O10.0513 (14)0.0525 (15)0.0393 (12)0.0266 (12)0.0165 (11)0.0053 (11)
O20.0514 (15)0.0654 (18)0.0412 (13)0.0217 (13)0.0241 (12)0.0072 (12)
S10.0578 (6)0.0690 (7)0.0632 (6)0.0001 (5)0.0359 (5)0.0059 (5)
S20.0513 (5)0.0638 (6)0.0607 (5)0.0038 (5)0.0240 (5)0.0040 (5)
S30.0524 (5)0.0430 (5)0.0469 (5)0.0039 (4)0.0039 (4)0.0001 (4)
S50.0660 (6)0.0651 (7)0.0605 (6)0.0041 (5)0.0244 (5)0.0164 (5)
S60.0591 (6)0.0605 (6)0.0596 (5)0.0081 (5)0.0305 (5)0.0003 (5)
S70.0707 (7)0.0527 (6)0.0548 (5)0.0180 (5)0.0201 (5)0.0117 (5)
S80.0529 (5)0.0445 (5)0.0456 (5)0.0024 (4)0.0036 (4)0.0002 (4)
S90.0552 (6)0.0438 (5)0.0452 (5)0.0029 (4)0.0038 (4)0.0004 (4)
S100.0577 (6)0.0432 (5)0.0595 (5)0.0142 (4)0.0153 (5)0.0020 (4)
O30.0389 (13)0.0567 (16)0.0467 (13)0.0008 (12)0.0078 (11)0.0022 (12)
C230.057 (2)0.061 (3)0.060 (2)0.022 (2)0.0116 (19)0.0175 (19)
C240.0332 (18)0.060 (2)0.0428 (18)0.0020 (16)0.0029 (15)0.0054 (16)
C250.079 (3)0.044 (2)0.051 (2)0.0144 (19)0.033 (2)0.0034 (17)
Geometric parameters (Å, º) top
Pd1—S42.2693 (10)C12—H120.9300
Pd1—S32.2747 (10)C13—C141.381 (5)
Pd1—S82.2749 (10)C13—H130.9300
Pd1—S92.2757 (11)C14—C151.376 (5)
S4—C31.708 (4)C14—H140.9300
C1—S11.628 (4)C15—N11.407 (4)
C1—S51.712 (5)C16—N11.498 (4)
C1—S21.741 (4)C16—C171.530 (4)
C2—C31.371 (5)C16—H16A0.9700
C2—S31.718 (4)C16—H16B0.9700
C2—S21.743 (4)C17—C181.365 (5)
C3—S51.727 (4)C17—C221.386 (5)
C4—S61.640 (4)C18—C191.379 (5)
C4—S101.708 (4)C18—H180.9300
C4—S71.732 (4)C19—C201.321 (5)
C5—C61.375 (5)C19—H190.9300
C5—S81.712 (4)C20—C211.385 (5)
C5—S71.726 (4)C20—N21.486 (4)
C6—S101.700 (4)C21—C221.364 (5)
C6—S91.737 (4)C21—H210.9300
C7—N11.301 (4)C22—H220.9300
C7—C81.380 (5)N2—O21.189 (4)
C7—H70.9300N2—O11.206 (4)
C8—C91.312 (5)O3—C241.173 (4)
C8—H80.9300C23—C241.490 (5)
C9—C101.425 (4)C23—H23A0.9600
C9—H90.9300C23—H23B0.9600
C10—C151.356 (4)C23—H23C0.9600
C10—C111.457 (4)C24—C251.414 (5)
C11—C121.338 (5)C25—H25A0.9600
C11—H110.9300C25—H25B0.9600
C12—C131.340 (5)C25—H25C0.9600
S4—Pd1—S390.97 (4)N1—C16—C17112.3 (3)
S4—Pd1—S8178.05 (4)N1—C16—H16A109.1
S3—Pd1—S890.62 (4)C17—C16—H16A109.1
S4—Pd1—S988.07 (4)N1—C16—H16B109.1
S3—Pd1—S9178.21 (4)C17—C16—H16B109.1
S8—Pd1—S990.37 (4)H16A—C16—H16B107.9
C3—S4—Pd1101.94 (13)C18—C17—C22120.1 (3)
S1—C1—S5124.5 (3)C18—C17—C16118.8 (3)
S1—C1—S2123.3 (3)C22—C17—C16121.1 (3)
S5—C1—S2112.2 (2)C17—C18—C19120.0 (4)
C3—C2—S3123.7 (3)C17—C18—H18120.0
C3—C2—S2115.8 (3)C19—C18—H18120.0
S3—C2—S2120.5 (2)C20—C19—C18119.4 (3)
C2—C3—S4122.4 (3)C20—C19—H19120.3
C2—C3—S5115.2 (3)C18—C19—H19120.3
S4—C3—S5122.4 (2)C19—C20—C21122.3 (3)
S6—C4—S10123.9 (2)C19—C20—N2119.1 (3)
S6—C4—S7122.3 (2)C21—C20—N2118.5 (3)
S10—C4—S7113.8 (2)C22—C21—C20118.8 (4)
C6—C5—S8123.9 (3)C22—C21—H21120.6
C6—C5—S7114.4 (3)C20—C21—H21120.6
S8—C5—S7121.7 (2)C21—C22—C17119.3 (4)
C5—C6—S10117.8 (3)C21—C22—H22120.3
C5—C6—S9121.1 (3)C17—C22—H22120.3
S10—C6—S9121.0 (2)C7—N1—C15120.7 (3)
N1—C7—C8121.5 (3)C7—N1—C16122.5 (3)
N1—C7—H7119.2C15—N1—C16116.8 (3)
C8—C7—H7119.2O2—N2—O1122.9 (3)
C9—C8—C7121.0 (3)O2—N2—C20119.1 (3)
C9—C8—H8119.5O1—N2—C20117.7 (3)
C7—C8—H8119.5C1—S2—C297.62 (19)
C8—C9—C10118.3 (3)C2—S3—Pd1100.94 (12)
C8—C9—H9120.8C1—S5—C399.10 (19)
C10—C9—H9120.8C5—S7—C497.10 (18)
C15—C10—C9120.8 (3)C5—S8—Pd1102.05 (12)
C15—C10—C11118.1 (3)C6—S9—Pd1102.50 (12)
C9—C10—C11121.1 (3)C6—S10—C496.92 (17)
C12—C11—C10119.7 (3)C24—C23—H23A109.5
C12—C11—H11120.1C24—C23—H23B109.5
C10—C11—H11120.1H23A—C23—H23B109.5
C11—C12—C13119.9 (3)C24—C23—H23C109.5
C11—C12—H12120.0H23A—C23—H23C109.5
C13—C12—H12120.0H23B—C23—H23C109.5
C12—C13—C14122.8 (3)O3—C24—C25124.3 (3)
C12—C13—H13118.6O3—C24—C23117.8 (3)
C14—C13—H13118.6C25—C24—C23117.4 (3)
C15—C14—C13118.2 (3)C24—C25—H25A109.5
C15—C14—H14120.9C24—C25—H25B109.5
C13—C14—H14120.9H25A—C25—H25B109.5
C10—C15—C14121.2 (3)C24—C25—H25C109.5
C10—C15—N1117.6 (3)H25A—C25—H25C109.5
C14—C15—N1121.2 (3)H25B—C25—H25C109.5
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C22—H22···O3i0.932.563.409 (5)152
C7—H7···O1ii0.932.353.226 (4)157
Symmetry codes: (i) x, y1, z; (ii) x, y+1/2, z+1/2.
 

Follow Acta Cryst. E
Sign up for e-alerts
Follow Acta Cryst. on Twitter
Follow us on facebook
Sign up for RSS feeds