data_global _publ_requested_journal 'Acta Crystallographica Section E' _publ_contact_author_name 'Dr Pengfei Shi' _publ_contact_author_address ; State Key Laboratory of Coordination Chemistry Nanjing University Nanjing 210093 People's Republic of China ; _publ_contact_author_email shipengfei@lianluo.com _publ_contact_author_phone (+86)-25-83594549 _publ_contact_author_fax (+86)-25-83314502 loop_ _publ_author_name _publ_author_address 'Shi, Pengfei' ; State Key Laboratory of Coordination Chemistry Nanjing University Nanjing 210093 People's Republic of China ; #========================================================================== _audit_creation_method SHELXL-97 _audit_creation_date '25 March 2006' #========================================================================== # PROCESSING SUMMARY (IUCr Office Use Only) _journal_date_recd_electronic ? _journal_date_to_coeditor ? _journal_date_from_coeditor ? _journal_date_accepted ? _journal_date_printers_first ? _journal_date_printers_final ? _journal_date_proofs_out ? _journal_date_proofs_in ? _journal_coeditor_name ? _journal_coeditor_code ? _journal_coeditor_notes ; ? ; _journal_techeditor_code ? _journal_techeditor_notes ; ? ; _journal_coden_ASTM ? _journal_name_full ? _journal_year ? _journal_volume ? _journal_issue ? _journal_page_first ? _journal_page_last ? _journal_suppl_publ_number ? _journal_suppl_publ_pages ? #========================================================================== # SUBMISSION DETAILS _publ_contact_letter ; Date of submission: 2006-3-25 Please consider this CIF submission for publication in Acta Cryst. 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Best wishes, Pengfei Shi ; _publ_requested_category EI _publ_requested_coeditor_name ? #========================================================================== # TITLE AND AUTHOR LIST _publ_section_title ; Gold(III) complex of DPA(2,2-dipyridinylamine) ; _publ_section_title_footnote . loop_ _publ_author_footnote . . #========================================================================== # TEXT _publ_section_abstract ; Gold(III) complex of DPA(2,2-dipyridinylamine) has been synthesized and characterized by ESI-MS,^1^H NMR spectroscopy and elemental analyses. Its structure was determinied by X-ray crystallography, in which DPA coordinates to the gold(III) center in a bidentate mode. The unbound cl anion forms a very short intermolecular Au-cl contact (3.037 angstrom), which bridge the cations into two-dimensional sheet together with hydrogen bonds.The title complex is more cytotoxic than cisplatin against A-549 and HCT-116 tumor cell lines. ; _publ_section_comment ; Gold(III) is isoelectronic and isostructural to Pt(II), therefore its complexes have long been evaluated as potential anticancer agents. (Shaw et al., 1999)However,because of the high reductive potential gold(III) complexes are not very stable under physiological conditions. (Messori et al., 2004) The essential prerequisite for any further pharmaceutical and pharmacological evaluation of gold(III) complexes is to make them stabilized.Therefore, selection of suitable ligands to achieve stable gold(III) complexes is of great importance. DPA add its derivatives are very popular ligands in coordination chemistry, (Fuchita,et al., 1985) in this paper we synthesized its gold(III) complex. UV-vis and ^1^H NMR data showed that the resulting complex exhibited reasonable stability at physiologically relevant environment. The molecular structure, crystal data, selected bond lengths of the title complex were shown in Fig. 1, Tables 1 and 2, respectively. In the cationic part, the gold(III) center was bound by two N atoms of DPA and two Cl atoms. All the Au---N and Au---Cl bond lengths are in the expected regions for gold(III) complexes.(Messori et al., 2002) The mean deviation from the best N2Cl2Au plane [Au(1), N(1), N(1 A), Cl(1), Cl(1 A)] is 0.035 angstrom. The dihedral angel between the coordination palne and the pyridinyl plane is 45.3 degree. There are two kind of hydrogen bonds: one is between the bound Cl and the hydrogen in the pyridine ring, which bridge the cations into one-dimensional ladder.The other is between the unbound cl and the hydrogen on the unbound nitrogen. The unbound cl anion also has very short contact with the Au center(3.037 angstrom),which will link the chains into two-dimensional sheet together with the latter type of hydrogen bonds. The whole crystal are composed of these sheets and the distance between two nearest layers is 3.3angstrom. Biological activity data showed that AuDPA has promising in vitro cytotoxicity against A-549 and HCT-116 tumor cell lines. ; _publ_section_exptl_prep ; The title compound was prepared by stirred a mixture of 34 mg DPA in 5 ml THF and 80 mg HAuCl4 in 2 ml H~2~O at room temperature for 12 h, yellow precipitate could be obtained and collected by filtration. Red crystals suitable for X-ray analysis were obtained by slow evaporation from CH~3~CN solution.Yield: 58%. Spectroscopic analysis: ^1^H NMR (CD~3~SOCD~3~, \d, p.p.m.): 8.71(d, 2H, J = 6.3 Hz), 8.26 (t, 2H, J = 7.7 Hz), 7.60 (d, 2H, J = 8.3 Hz), 7.54 (t, 2H, J = 6.73 Hz). elemental analyses, calculated for C~10~H~9~N~3~Cl~3~Au: C 25.31, H 1.91, N 8.86%; found: C 25.96, H 1.12, N 8.48%. ESI-MS (+P) m/z=438.1. ; _publ_section_exptl_refinement ; The structure of the complex was solved with Patterson methods to locate all the non-hydrogen atoms from the trial structure and then refined anisotropically with SHELXTL using full-matrix least-squares procedure. All the hydrogen atoms were geometrically fixed at calculated positions. ; _publ_section_acknowledgements ; We are grateful for the financial supports from the National Natural Science Foundation of China (Grants 20231010, 20228102 and 30370351) and the Natural Science Foundation of Jiangsu Province (BK 2005209). ; _publ_section_references ; 1) C. F. Shaw, III, Chem. Rev. 99 (1999) 2589 2) L. Messori, G. Marcon, Met. Ions Biol. Syst. 42 (2004) 385 3) Y.Fuchita, H.Ieda, Y.Tsunemune, J.Kinoshita-Nagaoka,H.Kawano J.Chem.Soc.,Dalton Trans., 1985, 791 4) L. Messori, F. Abbate, P. Orioli, C. Tempi, G. Marcon, Chem. Commun. (2002) 612 ; _publ_section_table_legends ; Table 1. Selected geometric parameters (\%A, \%). Table 2. Hydrogen-bonding geometry (\%A, \%). ; _publ_section_figure_captions ; Fig. 1. molecular structure of the title complex. Displacement ellipsoids are drawn at the 30% probability level. H atomsare represented by circles of arbitrary size. Fig. 2. Packing diagram of the gold(III) complex. Fig. 3 (top) Layed structure in the lattice; (below) one layer along a axis. ; #========================================================================== _chemical_name_systematic ; (2,2-dipyridinylamine)gold(III) chloride ; _chemical_name_common AuDPA _chemical_melting_point ? _chemical_formula_moiety 'C10 H9 Au Cl2 N3, Cl' _chemical_formula_sum 'C10 H9 Au Cl3 N3' _chemical_formula_weight 474.52 loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Au Au -2.0133 8.8022 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' _symmetry_cell_setting Orthorhombic _symmetry_space_group_name_H-M 'Pnma ' _symmetry_space_group_name_Hall '-P 2ac 2n' loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' '-x, y+1/2, -z' 'x+1/2, -y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, y, -z-1/2' 'x, -y-1/2, z' '-x-1/2, y-1/2, z-1/2' _cell_length_a 12.549(4) _cell_length_b 12.313(4) _cell_length_c 8.200(2) _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_volume 1267.0(7) _cell_formula_units_Z 4 _cell_measurement_temperature 273(2) _cell_measurement_reflns_used 3897 _cell_measurement_theta_min 2.318 _cell_measurement_theta_max 28.007 _exptl_crystal_description block _exptl_crystal_colour red _exptl_crystal_size_max 0.3 _exptl_crystal_size_mid 0.22 _exptl_crystal_size_min 0.16 _exptl_crystal_density_meas ? _exptl_crystal_density_diffrn 2.488 _exptl_crystal_density_method 'not measured' _exptl_crystal_F_000 880 _exptl_absorpt_coefficient_mu 12.222 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_correction_T_min 0.043 _exptl_absorpt_correction_T_max 0.141 _exptl_absorpt_process_details 'SADABS, Bruker(2000)' _exptl_special_details ; ? ; _diffrn_ambient_temperature 273(2) _diffrn_radiation_wavelength 0.71073 _diffrn_radiation_type MoK\a _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_monochromator graphite _diffrn_measurement_device_type 'CCD area detector' _diffrn_measurement_method 'phi and omega scans' _diffrn_reflns_number 6226 _diffrn_reflns_av_R_equivalents 0.0473 _diffrn_reflns_av_sigmaI/netI 0.0411 _diffrn_reflns_limit_h_min -15 _diffrn_reflns_limit_h_max 14 _diffrn_reflns_limit_k_min -15 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_l_min -10 _diffrn_reflns_limit_l_max 9 _diffrn_reflns_theta_min 2.97 _diffrn_reflns_theta_max 26.00 _reflns_number_total 1299 _reflns_number_gt 1238 _reflns_threshold_expression >2sigma(I) _computing_data_collection 'Bruker SMART' _computing_cell_refinement 'Bruker SMART' _computing_data_reduction 'Bruker SAINT' _computing_structure_solution 'Bruker SHELXTL' _computing_structure_refinement 'Bruker SHELXTL' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL' _refine_special_details ; Refinement of F^2^ against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F^2^, conventional R-factors R are based on F, with F set to zero for negative F^2^. The threshold expression of F^2^ > 2sigma(F^2^) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F^2^ are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. ; _refine_ls_structure_factor_coef Fsqd _refine_ls_matrix_type full _refine_ls_weighting_scheme calc _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0400P)^2^+1.2000P] where P=(Fo^2^+2Fc^2^)/3' _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _atom_sites_solution_hydrogens geom _refine_ls_hydrogen_treatment constr _refine_ls_extinction_method SHELXL _refine_ls_extinction_coef 0.0010(3) _refine_ls_extinction_expression Fc^*^=kFc[1+0.001xFc^2^\l^3^/sin(2\q)]^-1/4^ _refine_ls_number_reflns 1299 _refine_ls_number_parameters 83 _refine_ls_number_restraints 0 _refine_ls_R_factor_all 0.0335 _refine_ls_R_factor_gt 0.0310 _refine_ls_wR_factor_ref 0.0811 _refine_ls_wR_factor_gt 0.0797 _refine_ls_goodness_of_fit_ref 1.211 _refine_ls_restrained_S_all 1.211 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group Au1 Au -0.01457(3) 0.2500 0.79813(3) 0.02220(17) Uani 1 2 d S . . C1 C 0.0960(4) 0.3501(4) 0.5219(6) 0.0230(11) Uani 1 1 d . . . C2 C 0.1337(4) 0.4368(4) 0.4301(6) 0.0256(12) Uani 1 1 d . . . H2 H 0.1439 0.4291 0.3184 0.031 Uiso 1 1 calc R . . C3 C 0.1557(5) 0.5326(6) 0.5039(7) 0.0342(14) Uani 1 1 d . . . H3 H 0.1814 0.5907 0.4432 0.041 Uiso 1 1 calc R . . C4 C 0.1395(5) 0.5437(5) 0.6725(7) 0.0306(13) Uani 1 1 d . . . H4 H 0.1568 0.6079 0.7259 0.037 Uiso 1 1 calc R . . C5 C 0.0978(5) 0.4580(5) 0.7559(7) 0.0291(13) Uani 1 1 d . . . H5 H 0.0852 0.4652 0.8671 0.035 Uiso 1 1 calc R . . Cl1 Cl -0.12403(13) 0.12232(13) 0.90454(18) 0.0383(4) Uani 1 1 d . . . Cl2 Cl 0.1446(2) 0.2500 0.0773(2) 0.0396(5) Uani 1 2 d S . . N1 N 0.0740(4) 0.3628(4) 0.6822(5) 0.0215(10) Uani 1 1 d . . . N2 N 0.0785(6) 0.2500 0.4495(7) 0.0283(15) Uani 1 2 d S . . H2B H 0.1198 0.2500 0.3597 0.034 Uiso 1 2 d SR . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Au1 0.0196(2) 0.0283(2) 0.0187(2) 0.000 0.00365(10) 0.000 C1 0.017(3) 0.030(3) 0.022(2) 0.000(2) 0.000(2) 0.006(2) C2 0.020(3) 0.032(3) 0.024(3) 0.004(2) 0.004(2) 0.003(2) C3 0.020(3) 0.039(3) 0.044(4) 0.010(3) 0.002(3) 0.000(3) C4 0.029(4) 0.027(3) 0.036(3) 0.000(2) -0.006(3) -0.003(3) C5 0.028(3) 0.035(3) 0.025(2) -0.007(2) -0.006(3) 0.003(3) Cl1 0.0358(9) 0.0430(9) 0.0360(8) 0.0051(6) 0.0115(7) -0.0096(7) Cl2 0.0457(14) 0.0497(13) 0.0234(9) 0.000 -0.0026(9) 0.000 N1 0.017(2) 0.027(2) 0.021(2) 0.0025(17) 0.0029(17) -0.001(2) N2 0.034(4) 0.030(4) 0.021(3) 0.000 0.007(3) 0.000 _geom_special_details ; All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. ; loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag Au1 N1 2.016(5) 7_565 ? Au1 N1 2.016(5) . ? Au1 Cl1 2.2627(15) . ? Au1 Cl1 2.2627(15) 7_565 ? Au1 Cl2 3.038(2) 1_556 ? C1 N1 1.352(6) . ? C1 N2 1.385(6) . ? C1 C2 1.390(8) . ? C2 C3 1.354(9) . ? C2 H2 0.9300 . ? C3 C4 1.404(8) . ? C3 H3 0.9300 . ? C4 C5 1.362(9) . ? C4 H4 0.9300 . ? C5 N1 1.352(8) . ? C5 H5 0.9300 . ? N2 C1 1.385(6) 7_565 ? N2 H2B 0.9000 . ? loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag N1 Au1 N1 87.0(3) 7_565 . ? N1 Au1 Cl1 92.17(14) 7_565 . ? N1 Au1 Cl1 174.11(13) . . ? N1 Au1 Cl1 174.11(13) 7_565 7_565 ? N1 Au1 Cl1 92.17(14) . 7_565 ? Cl1 Au1 Cl1 88.02(9) . 7_565 ? N1 Au1 Cl2 89.61(13) 7_565 1_556 ? N1 Au1 Cl2 89.61(13) . 1_556 ? Cl1 Au1 Cl2 96.23(5) . 1_556 ? Cl1 Au1 Cl2 96.23(5) 7_565 1_556 ? N1 C1 N2 119.2(5) . . ? N1 C1 C2 120.5(5) . . ? N2 C1 C2 120.3(5) . . ? C3 C2 C1 119.8(5) . . ? C3 C2 H2 120.1 . . ? C1 C2 H2 120.1 . . ? C2 C3 C4 119.7(6) . . ? C2 C3 H3 120.1 . . ? C4 C3 H3 120.1 . . ? C5 C4 C3 118.3(6) . . ? C5 C4 H4 120.8 . . ? C3 C4 H4 120.8 . . ? N1 C5 C4 122.2(5) . . ? N1 C5 H5 118.9 . . ? C4 C5 H5 118.9 . . ? C5 N1 C1 119.3(5) . . ? C5 N1 Au1 120.5(4) . . ? C1 N1 Au1 119.4(4) . . ? C1 N2 C1 125.6(6) . 7_565 ? C1 N2 H2B 105.1 . . ? C1 N2 H2B 105.1 7_565 . ? loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_2 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 _geom_torsion_publ_flag N1 C1 C2 C3 4.6(9) . . . . ? N2 C1 C2 C3 -176.6(6) . . . . ? C1 C2 C3 C4 -0.4(9) . . . . ? C2 C3 C4 C5 -2.6(10) . . . . ? C3 C4 C5 N1 1.5(10) . . . . ? C4 C5 N1 C1 2.7(9) . . . . ? C4 C5 N1 Au1 -167.4(5) . . . . ? N2 C1 N1 C5 175.4(6) . . . . ? C2 C1 N1 C5 -5.7(8) . . . . ? N2 C1 N1 Au1 -14.4(7) . . . . ? C2 C1 N1 Au1 164.4(4) . . . . ? N1 Au1 N1 C5 -145.9(4) 7_565 . . . ? Cl1 Au1 N1 C5 40.0(4) 7_565 . . . ? Cl2 Au1 N1 C5 -56.3(4) 1_556 . . . ? N1 Au1 N1 C1 44.1(5) 7_565 . . . ? Cl1 Au1 N1 C1 -130.1(4) 7_565 . . . ? Cl2 Au1 N1 C1 133.7(4) 1_556 . . . ? N1 C1 N2 C1 -37.2(11) . . . 7_565 ? C2 C1 N2 C1 144.0(6) . . . 7_565 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A N2 H2B Cl2 0.90 2.34 3.162(6) 152.5 . C5 H5 Cl1 0.93 2.74 3.458(6) 135.1 3_557 loop_ _publ_manuscript_incl_extra_item '_geom_extra_tableA_col_1' '_geom_extra_tableA_col_2' '_geom_extra_tableA_col_3' '_geom_extra_tableA_col_4' '_geom_extra_table_head_A' loop_ _geom_extra_tableA_col_1 _geom_extra_tableA_col_2 _geom_extra_tableA_col_3 _geom_extra_tableA_col_4 Au(1)---N(1A) 2.015(5) Au(1)--Cl(1A) 2.2628(16) 'Au(1)---N(1) ' 2.015(5) Au(1)--Cl(1) 2.2628(16) N(1A)--Au(1)--N(1) 87.0(3) N(1A)--Au(1)--Cl(1) 92.18(15) N(1)--Au(1)--Cl(1) 174.11(13) N(1A)--Au(1)--Cl(1A) 174.11(13) N(1)--Au(1)--Cl(1A) 92.18(15) Cl(1)--Au(1)--Cl(1A) 88.02(9) _geom_extra_table_head_A ; Selected geometric parameters (\%A, \%) ; _diffrn_measured_fraction_theta_max 0.996 _diffrn_reflns_theta_full 26.00 _diffrn_measured_fraction_theta_full 0.996 _refine_diff_density_max 1.508 _refine_diff_density_min -1.609 _refine_diff_density_rms 0.192 # End of CIF ============================================================ # Formatted by publCIF