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The title compound, namely (2′S,3′S,3aR,5′R,6aS,9R,9aS,10aR)-1,3a,4,4′,5′,6a,7,8,9,9a,10,10a-dodeca­hydro-9-hydr­oxy-3′,9,10a-trimethyl-5′-(2-methyl­propen-1-yl)-7-oxospiro[dicyclo­penta­[a,d]cyclo­octene-3(2H),2′(3′H)-furan]-6-carbaldehyde, C25H36O4, displays phytotoxic behaviour that may be correlated with some structural features of the mol­ecule. The eight-membered ring of the terpenoid tricyclic skeleton is cis- and trans-joined with the fused five-membered rings. One intra­molecular O—H...O hydrogen bond and two inter­molecular C—H...O hydrogen bonds are present.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536806015807/rz2027sup1.cif
Contains datablocks global, I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S1600536806015807/rz2027Isup2.hkl
Contains datablock I

CCDC reference: 610875

Key indicators

  • Single-crystal X-ray study
  • T = 173 K
  • Mean [sigma](C-C) = 0.007 Å
  • R factor = 0.054
  • wR factor = 0.114
  • Data-to-parameter ratio = 8.3

checkCIF/PLATON results

No syntax errors found



Alert level C RINTA01_ALERT_3_C The value of Rint is greater than 0.10 Rint given 0.112 PLAT020_ALERT_3_C The value of Rint is greater than 0.10 ......... 0.11 PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.35 Ratio PLAT222_ALERT_3_C Large Non-Solvent H Ueq(max)/Ueq(min) ... 3.50 Ratio PLAT340_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 7 PLAT380_ALERT_4_C Check Incorrectly? Oriented X(sp2)-Methyl Moiety C24
Alert level G REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 25.00 From the CIF: _reflns_number_total 2208 Count of symmetry unique reflns 2244 Completeness (_total/calc) 98.40% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 0 Fraction of Friedel pairs measured 0.000 Are heavy atom types Z>Si present no
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 6 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 4 ALERT type 3 Indicator that the structure quality may be low 2 ALERT type 4 Improvement, methodology, query or suggestion

Computing details top

Data collection: COLLECT (Nonius, 1999); cell refinement: DIRAX/LSQ (Duisenberg et al., 2000); data reduction: EVALCCD (Duisenberg et al., 2003); program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).

(2'S,3'S,3aR,5'R,6aS,9R,9aS,10aR)-1,3a,4,4',5',6a,7,8,9,9a,10,10a- dodecahydro-9-hydroxy-3',9,10a-trimethyl-5'-(2-methylpropen-1-yl)-7- oxospiro[dicyclopenta[a,d]cyclooctene-3(2H),2'(3'H)-furan]-6-carbaldehyde top
Crystal data top
C25H36O4F(000) = 872
Mr = 400.54Dx = 1.210 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 192 reflections
a = 7.251 (4) Åθ = 4.1–24.2°
b = 14.756 (9) ŵ = 0.08 mm1
c = 20.55 (2) ÅT = 173 K
V = 2199 (3) Å3Prism, colourless
Z = 40.20 × 0.20 × 0.07 mm
Data collection top
Bruker Nonius KappaCCD area-detector
diffractometer
2208 independent reflections
Radiation source: fine-focus sealed tube1356 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.112
Detector resolution: 9 pixels mm-1θmax = 25.0°, θmin = 3°
Thick–slice φ and ω scansh = 87
Absorption correction: multi-scan
(SADABS; Bruker Nonius, 2002)
k = 1716
Tmin = 0.980, Tmax = 0.994l = 2420
7226 measured reflections
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.054Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.114H-atom parameters constrained
S = 1.04 w = 1/[σ2(Fo2) + (0.0367P)2 + 0.6026P]
where P = (Fo2 + 2Fc2)/3
2208 reflections(Δ/σ)max < 0.001
267 parametersΔρmax = 0.24 e Å3
0 restraintsΔρmin = 0.25 e Å3
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O10.9599 (4)0.5785 (2)0.55823 (15)0.0298 (9)
H10.93450.62980.54300.030*
O21.2591 (5)0.6516 (2)0.38921 (19)0.0384 (10)
O30.9319 (5)0.7256 (2)0.47325 (18)0.0359 (9)
O40.2862 (4)0.4017 (2)0.32500 (14)0.0254 (8)
C10.7966 (6)0.4362 (3)0.4762 (2)0.0209 (11)
H1A0.71130.48650.48660.021*
H1B0.80680.39820.51580.021*
C20.9863 (6)0.4771 (3)0.4628 (2)0.0206 (12)
H21.06660.42560.44880.021*
C31.0823 (6)0.5195 (3)0.5234 (2)0.0224 (12)
C41.2423 (6)0.5728 (3)0.4925 (2)0.0275 (13)
H4A1.27090.62730.51880.027*
H4B1.35430.53460.49000.027*
C51.1801 (7)0.5999 (3)0.4252 (3)0.0271 (12)
C61.0028 (6)0.5502 (3)0.4086 (2)0.0234 (12)
H61.02360.51770.36650.023*
C70.8372 (7)0.6116 (3)0.3993 (2)0.0233 (12)
C80.6930 (7)0.5878 (3)0.3629 (2)0.0252 (12)
H80.59680.63110.35890.025*
C90.6670 (7)0.4999 (3)0.3277 (2)0.0255 (12)
H9A0.78750.47740.31190.025*
H9B0.58560.50910.28960.025*
C100.5805 (6)0.4298 (3)0.3739 (2)0.0163 (11)
H100.49430.46550.40190.016*
C110.7058 (6)0.3780 (3)0.4225 (2)0.0202 (11)
C120.5579 (7)0.3157 (3)0.4529 (2)0.0244 (12)
H12A0.61610.26130.47220.024*
H12B0.48950.34820.48740.024*
C130.4280 (7)0.2888 (3)0.3977 (2)0.0254 (12)
H13A0.29830.29090.41270.025*
H13B0.45570.22650.38270.025*
C140.4586 (6)0.3572 (3)0.3417 (2)0.0247 (12)
C150.5354 (7)0.3191 (3)0.2756 (2)0.0277 (13)
H150.66590.33970.27040.028*
C160.4164 (7)0.3667 (4)0.2242 (2)0.0307 (13)
H16A0.47230.42500.21080.031*
H16B0.40020.32800.18530.031*
C170.2326 (7)0.3818 (3)0.2591 (2)0.0285 (13)
H170.15730.32510.25790.029*
C180.1223 (6)0.4595 (4)0.2337 (2)0.0318 (14)
H180.15080.51720.25140.032*
C190.0096 (7)0.4577 (4)0.1898 (2)0.0363 (14)
C201.1435 (7)0.4498 (4)0.5724 (2)0.0334 (14)
H20A1.21190.47980.60750.033*
H20B1.22320.40520.55110.033*
H20C1.03510.41920.59060.033*
C210.8247 (7)0.6984 (4)0.4332 (3)0.0312 (13)
H210.72330.73640.42270.031*
C220.8522 (6)0.3181 (3)0.3887 (2)0.0226 (12)
H22A0.93020.35600.36080.023*
H22B0.79060.27200.36220.023*
H22C0.92880.28850.42180.023*
C230.5289 (8)0.2167 (4)0.2665 (3)0.0403 (15)
H23A0.40080.19580.26950.040*
H23B0.60270.18730.30040.040*
H23C0.57880.20100.22360.040*
C240.1017 (8)0.5426 (5)0.1668 (3)0.0556 (19)
H24A0.05120.59470.19040.056*
H24B0.23470.53840.17490.056*
H24C0.07970.55030.12010.056*
C250.0768 (8)0.3725 (5)0.1568 (3)0.0542 (19)
H25A0.04140.37370.11080.054*
H25B0.21140.36890.16030.054*
H25C0.02130.31950.17790.054*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O10.032 (2)0.024 (2)0.034 (2)0.0062 (16)0.0032 (17)0.0072 (17)
O20.029 (2)0.041 (2)0.045 (2)0.0038 (18)0.0115 (19)0.009 (2)
O30.041 (2)0.023 (2)0.044 (2)0.0047 (18)0.006 (2)0.0072 (19)
O40.0224 (18)0.038 (2)0.0154 (18)0.0064 (16)0.0032 (15)0.0013 (16)
C10.020 (3)0.021 (3)0.022 (3)0.004 (2)0.002 (2)0.004 (2)
C20.019 (3)0.023 (3)0.020 (3)0.003 (2)0.000 (2)0.002 (2)
C30.019 (3)0.023 (3)0.025 (3)0.001 (2)0.001 (2)0.003 (2)
C40.018 (3)0.029 (3)0.035 (3)0.005 (2)0.002 (2)0.009 (2)
C50.017 (3)0.027 (3)0.037 (3)0.005 (2)0.006 (2)0.001 (3)
C60.026 (3)0.024 (3)0.020 (3)0.004 (2)0.006 (2)0.002 (2)
C70.026 (3)0.019 (3)0.024 (3)0.001 (2)0.003 (2)0.000 (2)
C80.027 (3)0.019 (3)0.029 (3)0.001 (2)0.007 (2)0.009 (2)
C90.028 (3)0.032 (3)0.016 (3)0.003 (2)0.003 (2)0.007 (2)
C100.018 (2)0.017 (3)0.015 (3)0.001 (2)0.004 (2)0.002 (2)
C110.021 (3)0.022 (3)0.018 (3)0.002 (2)0.002 (2)0.002 (2)
C120.027 (3)0.027 (3)0.019 (3)0.007 (2)0.004 (2)0.002 (2)
C130.025 (3)0.026 (3)0.025 (3)0.004 (2)0.004 (2)0.000 (2)
C140.018 (3)0.028 (3)0.028 (3)0.008 (2)0.000 (2)0.003 (2)
C150.022 (3)0.033 (3)0.028 (3)0.003 (2)0.002 (2)0.002 (3)
C160.023 (3)0.048 (4)0.021 (3)0.001 (3)0.001 (2)0.002 (3)
C170.024 (3)0.042 (3)0.020 (3)0.000 (3)0.004 (2)0.007 (3)
C180.026 (3)0.042 (4)0.027 (3)0.003 (3)0.004 (3)0.006 (3)
C190.020 (3)0.069 (4)0.020 (3)0.011 (3)0.005 (2)0.010 (3)
C200.037 (3)0.035 (4)0.028 (3)0.002 (3)0.008 (3)0.005 (3)
C210.034 (3)0.023 (3)0.036 (3)0.008 (3)0.005 (3)0.005 (3)
C220.023 (3)0.022 (3)0.023 (3)0.000 (2)0.007 (2)0.003 (2)
C230.036 (3)0.050 (4)0.035 (4)0.001 (3)0.007 (3)0.009 (3)
C240.040 (4)0.088 (5)0.039 (4)0.019 (4)0.004 (3)0.026 (4)
C250.032 (3)0.096 (6)0.034 (4)0.007 (3)0.007 (3)0.004 (4)
Geometric parameters (Å, º) top
O1—C31.434 (5)C12—H12A0.9900
O1—H10.8400C12—H12B0.9900
O2—C51.207 (6)C13—C141.546 (7)
O3—C211.202 (6)C13—H13A0.9900
O4—C171.439 (6)C13—H13B0.9900
O4—C141.453 (5)C14—C151.573 (7)
C1—C21.527 (6)C15—C231.524 (7)
C1—C111.546 (6)C15—C161.534 (7)
C1—H1A0.9900C15—H151.0000
C1—H1B0.9900C16—C171.530 (7)
C2—C61.556 (6)C16—H16A0.9900
C2—C31.557 (6)C16—H16B0.9900
C2—H21.0000C17—C181.491 (7)
C3—C201.506 (7)C17—H171.0000
C3—C41.539 (7)C18—C191.315 (7)
C4—C51.509 (7)C18—H180.9500
C4—H4A0.9900C19—C241.496 (8)
C4—H4B0.9900C19—C251.510 (8)
C5—C61.519 (7)C20—H20A0.9800
C6—C71.515 (6)C20—H20B0.9800
C6—H61.0000C20—H20C0.9800
C7—C81.332 (7)C21—H210.9500
C7—C211.460 (7)C22—H22A0.9800
C8—C91.497 (7)C22—H22B0.9800
C8—H80.9500C22—H22C0.9800
C9—C101.537 (6)C23—H23A0.9800
C9—H9A0.9900C23—H23B0.9800
C9—H9B0.9900C23—H23C0.9800
C10—C141.538 (6)C24—H24A0.9800
C10—C111.551 (6)C24—H24B0.9800
C10—H101.0000C24—H24C0.9800
C11—C121.544 (6)C25—H25A0.9800
C11—C221.546 (6)C25—H25B0.9800
C12—C131.527 (6)C25—H25C0.9800
C3—O1—H1119.8C14—C13—H13A110.3
C17—O4—C14111.3 (3)C12—C13—H13B110.3
C2—C1—C11118.3 (4)C14—C13—H13B110.3
C2—C1—H1A107.7H13A—C13—H13B108.5
C11—C1—H1A107.7O4—C14—C10106.3 (4)
C2—C1—H1B107.7O4—C14—C13110.3 (4)
C11—C1—H1B107.7C10—C14—C13102.5 (4)
H1A—C1—H1B107.1O4—C14—C15105.2 (4)
C1—C2—C6118.2 (4)C10—C14—C15114.7 (4)
C1—C2—C3114.7 (4)C13—C14—C15117.4 (4)
C6—C2—C3105.0 (4)C23—C15—C16110.6 (4)
C1—C2—H2106.0C23—C15—C14116.8 (4)
C6—C2—H2106.0C16—C15—C14103.4 (4)
C3—C2—H2106.0C23—C15—H15108.6
O1—C3—C20105.2 (4)C16—C15—H15108.6
O1—C3—C4111.2 (4)C14—C15—H15108.6
C20—C3—C4113.8 (4)C17—C16—C15103.5 (4)
O1—C3—C2111.5 (4)C17—C16—H16A111.1
C20—C3—C2113.1 (4)C15—C16—H16A111.1
C4—C3—C2102.3 (4)C17—C16—H16B111.1
C5—C4—C3106.7 (4)C15—C16—H16B111.1
C5—C4—H4A110.4H16A—C16—H16B109.0
C3—C4—H4A110.4O4—C17—C18108.5 (4)
C5—C4—H4B110.4O4—C17—C16103.6 (4)
C3—C4—H4B110.4C18—C17—C16114.5 (4)
H4A—C4—H4B108.6O4—C17—H17110.0
O2—C5—C4125.9 (5)C18—C17—H17110.0
O2—C5—C6124.7 (5)C16—C17—H17110.0
C4—C5—C6109.3 (4)C19—C18—C17128.0 (6)
C7—C6—C5114.2 (4)C19—C18—H18116.0
C7—C6—C2116.3 (4)C17—C18—H18116.0
C5—C6—C2103.8 (4)C18—C19—C24121.7 (6)
C7—C6—H6107.3C18—C19—C25124.0 (6)
C5—C6—H6107.3C24—C19—C25114.3 (5)
C2—C6—H6107.3C3—C20—H20A109.5
C8—C7—C21116.7 (5)C3—C20—H20B109.5
C8—C7—C6122.3 (4)H20A—C20—H20B109.5
C21—C7—C6120.9 (4)C3—C20—H20C109.5
C7—C8—C9126.7 (4)H20A—C20—H20C109.5
C7—C8—H8116.6H20B—C20—H20C109.5
C9—C8—H8116.6O3—C21—C7125.4 (5)
C8—C9—C10109.6 (4)O3—C21—H21117.3
C8—C9—H9A109.7C7—C21—H21117.3
C10—C9—H9A109.7C11—C22—H22A109.5
C8—C9—H9B109.7C11—C22—H22B109.5
C10—C9—H9B109.7H22A—C22—H22B109.5
H9A—C9—H9B108.2C11—C22—H22C109.5
C9—C10—C14115.9 (4)H22A—C22—H22C109.5
C9—C10—C11119.3 (4)H22B—C22—H22C109.5
C14—C10—C11105.6 (4)C15—C23—H23A109.5
C9—C10—H10104.8C15—C23—H23B109.5
C14—C10—H10104.8H23A—C23—H23B109.5
C11—C10—H10104.8C15—C23—H23C109.5
C12—C11—C22108.6 (4)H23A—C23—H23C109.5
C12—C11—C1109.7 (4)H23B—C23—H23C109.5
C22—C11—C1110.2 (4)C19—C24—H24A109.5
C12—C11—C1098.5 (4)C19—C24—H24B109.5
C22—C11—C10113.3 (4)H24A—C24—H24B109.5
C1—C11—C10115.8 (4)C19—C24—H24C109.5
C13—C12—C11106.4 (4)H24A—C24—H24C109.5
C13—C12—H12A110.5H24B—C24—H24C109.5
C11—C12—H12A110.5C19—C25—H25A109.5
C13—C12—H12B110.5C19—C25—H25B109.5
C11—C12—H12B110.5H25A—C25—H25B109.5
H12A—C12—H12B108.6C19—C25—H25C109.5
C12—C13—C14107.1 (4)H25A—C25—H25C109.5
C12—C13—H13A110.3H25B—C25—H25C109.5
C11—C1—C2—C665.8 (6)C9—C10—C11—C166.0 (5)
C11—C1—C2—C3169.4 (4)C14—C10—C11—C1161.3 (4)
C1—C2—C3—O148.5 (5)C22—C11—C12—C1380.6 (5)
C6—C2—C3—O182.9 (4)C1—C11—C12—C13158.9 (4)
C1—C2—C3—C2069.8 (5)C10—C11—C12—C1337.5 (5)
C6—C2—C3—C20158.8 (4)C11—C12—C13—C1417.9 (5)
C1—C2—C3—C4167.5 (4)C17—O4—C14—C10132.1 (4)
C6—C2—C3—C436.0 (4)C17—O4—C14—C13117.4 (4)
O1—C3—C4—C590.6 (5)C17—O4—C14—C1510.1 (5)
C20—C3—C4—C5150.9 (4)C9—C10—C14—O475.1 (5)
C2—C3—C4—C528.6 (5)C11—C10—C14—O4150.3 (4)
C3—C4—C5—O2170.4 (5)C9—C10—C14—C13169.0 (4)
C3—C4—C5—C610.7 (5)C11—C10—C14—C1334.5 (4)
O2—C5—C6—C765.3 (6)C9—C10—C14—C1540.6 (5)
C4—C5—C6—C7115.8 (5)C11—C10—C14—C1593.9 (4)
O2—C5—C6—C2167.0 (5)C12—C13—C14—O4122.9 (4)
C4—C5—C6—C211.9 (5)C12—C13—C14—C109.9 (5)
C1—C2—C6—C732.8 (6)C12—C13—C14—C15116.7 (4)
C3—C2—C6—C796.6 (5)O4—C14—C15—C23108.6 (5)
C1—C2—C6—C5159.2 (4)C10—C14—C15—C23135.0 (5)
C3—C2—C6—C529.8 (4)C13—C14—C15—C2314.5 (6)
C5—C6—C7—C8154.9 (5)O4—C14—C15—C1613.1 (5)
C2—C6—C7—C884.1 (6)C10—C14—C15—C16103.3 (5)
C5—C6—C7—C2128.4 (7)C13—C14—C15—C16136.2 (4)
C2—C6—C7—C2192.6 (5)C23—C15—C16—C1795.9 (5)
C21—C7—C8—C9175.2 (4)C14—C15—C16—C1729.9 (5)
C6—C7—C8—C91.6 (8)C14—O4—C17—C18151.4 (4)
C7—C8—C9—C1086.2 (6)C14—O4—C17—C1629.3 (5)
C8—C9—C10—C14150.4 (4)C15—C16—C17—O436.3 (5)
C8—C9—C10—C1181.5 (5)C15—C16—C17—C18154.3 (4)
C2—C1—C11—C12159.0 (4)O4—C17—C18—C19150.5 (5)
C2—C1—C11—C2239.5 (5)C16—C17—C18—C1994.3 (6)
C2—C1—C11—C1090.7 (5)C17—C18—C19—C24176.9 (5)
C9—C10—C11—C12177.2 (4)C17—C18—C19—C251.0 (9)
C14—C10—C11—C1244.5 (4)C8—C7—C21—O3171.4 (5)
C9—C10—C11—C2262.7 (5)C6—C7—C21—O35.4 (8)
C14—C10—C11—C2270.0 (5)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
O1—H1···O30.842.012.794 (5)154
C4—H4A···O3i0.992.473.352 (6)148
C8—H8···O2ii0.952.543.328 (6)140
Symmetry codes: (i) x+1/2, y+3/2, z+1; (ii) x1, y, z.
 

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