In the crystal structure of the title compound, [Co2(C14H12N2O8)(C10H8N2)2(H2O)2]·4H2O, p-phenylenediaminetetraacetate (PhDTA) is located across an inversion center and bridges two CoII atoms to form the dinuclear molecule. The CoII atom has a distorted octahedral coordination geometry. Extensive intermolecular hydrogen bonding helps to stabilize the crystal structure.
Supporting information
CCDC reference: 610930
Key indicators
- Single-crystal X-ray study
- T = 295 K
- Mean (C-C) = 0.004 Å
- R factor = 0.031
- wR factor = 0.078
- Data-to-parameter ratio = 11.5
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ?
PLAT230_ALERT_2_C Hirshfeld Test Diff for O4 - C4 .. 5.00 su
PLAT410_ALERT_2_C Short Intra H...H Contact H4 .. H18A .. 1.97 Ang.
PLAT720_ALERT_4_C Number of Unusual/Non-Standard Label(s) ........ 6
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
4 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
2 ALERT type 2 Indicator that the structure model may be wrong or deficient
0 ALERT type 3 Indicator that the structure quality may be low
1 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: SMART (Bruker, 2002); cell refinement: SAINT (Bruker, 2002); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXL97.
Diaqua-bis(2,2'-bipyridine)-dicobalt(II)
(µ-
p-phenylenediamine-
N,
N,
N',
N'-tetraacetato) tetrahydrate
top
Crystal data top
[Co2(C14H12N2O8)(C10H8N2)2(H2O)2]·4H2O | Z = 1 |
Mr = 874.58 | F(000) = 452 |
Triclinic, P1 | Dx = 1.552 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.8813 (9) Å | Cell parameters from 1700 reflections |
b = 9.9042 (9) Å | θ = 2.1–25.0° |
c = 10.824 (1) Å | µ = 0.96 mm−1 |
α = 66.108 (2)° | T = 295 K |
β = 75.257 (2)° | Block, red |
γ = 86.508 (2)° | 0.26 × 0.22 × 0.20 mm |
V = 935.59 (15) Å3 | |
Data collection top
Bruker APEX area-dectector diffractometer | 3278 independent reflections |
Radiation source: fine-focus sealed tube | 2976 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.016 |
Detector resolution: 0 pixels mm-1 | θmax = 25.0°, θmin = 2.1° |
φ and ω scans | h = −11→11 |
Absorption correction: multi-scan (SADABS; Bruker, 2002) | k = −11→11 |
Tmin = 0.737, Tmax = 0.820 | l = −12→12 |
6768 measured reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.031 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.078 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0423P)2 + 0.2519P] where P = (Fo2 + 2Fc2)/3 |
3278 reflections | (Δ/σ)max = 0.001 |
285 parameters | Δρmax = 0.29 e Å−3 |
6 restraints | Δρmin = −0.21 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O6 | 0.7527 (2) | 0.3088 (3) | 0.6459 (2) | 0.0620 (5) | |
Co1 | 0.77246 (3) | 0.84133 (3) | 0.70566 (3) | 0.02853 (11) | |
O1 | 0.80423 (16) | 0.88843 (16) | 0.86295 (15) | 0.0377 (4) | |
O4 | 0.97254 (14) | 0.78061 (15) | 0.64011 (15) | 0.0368 (4) | |
O5W | 0.80799 (17) | 1.06175 (17) | 0.56758 (17) | 0.0411 (4) | |
N2 | 0.55431 (17) | 0.87833 (19) | 0.75897 (18) | 0.0334 (4) | |
N1 | 0.78332 (16) | 0.60972 (18) | 0.87061 (17) | 0.0290 (4) | |
N3 | 0.68953 (18) | 0.77378 (19) | 0.57546 (18) | 0.0334 (4) | |
C2 | 0.6421 (2) | 0.5481 (2) | 0.9384 (2) | 0.0293 (4) | |
C4 | 0.9964 (2) | 0.6426 (2) | 0.6836 (2) | 0.0365 (5) | |
H4 | 0.626 | 0.431 | 0.825 | 0.043* | |
C13 | 0.5492 (2) | 0.7755 (2) | 0.5950 (2) | 0.0346 (5) | |
C1 | 0.5777 (2) | 0.4616 (2) | 0.8945 (2) | 0.0361 (5) | |
H1 | 0.601 | 0.641 | 1.079 | 0.043* | |
C18 | 0.8756 (2) | 0.5374 (2) | 0.7874 (2) | 0.0348 (5) | |
H18A | 0.8224 | 0.5075 | 0.7380 | 0.042* | |
H18B | 0.9116 | 0.4495 | 0.8489 | 0.042* | |
O3 | 0.8945 (2) | 0.8112 (2) | 1.0454 (2) | 0.0649 (5) | |
O2 | 1.10696 (17) | 0.59163 (19) | 0.64410 (19) | 0.0596 (5) | |
C12 | 0.4731 (2) | 0.8328 (2) | 0.6997 (2) | 0.0359 (5) | |
C6 | 0.8506 (2) | 0.7899 (2) | 0.9585 (2) | 0.0356 (5) | |
C3 | 0.5621 (2) | 0.5850 (2) | 1.0447 (2) | 0.0363 (5) | |
C19 | 0.8569 (2) | 0.6345 (2) | 0.9632 (2) | 0.0341 (5) | |
H19A | 0.9544 | 0.6123 | 0.9380 | 0.041* | |
H19B | 0.8168 | 0.5656 | 1.0585 | 0.041* | |
C11 | 0.3294 (3) | 0.8440 (3) | 0.7325 (3) | 0.0575 (7) | |
H11 | 0.2743 | 0.8111 | 0.6913 | 0.069* | |
C14 | 0.4830 (3) | 0.7301 (3) | 0.5199 (3) | 0.0512 (6) | |
H14 | 0.3859 | 0.7294 | 0.5369 | 0.061* | |
C8 | 0.4932 (2) | 0.9372 (3) | 0.8493 (3) | 0.0465 (6) | |
H8 | 0.5495 | 0.9697 | 0.8897 | 0.056* | |
C17 | 0.7641 (2) | 0.7311 (3) | 0.4766 (2) | 0.0426 (5) | |
H17 | 0.8611 | 0.7313 | 0.4615 | 0.051* | |
C15 | 0.5617 (3) | 0.6860 (3) | 0.4194 (3) | 0.0559 (7) | |
H15 | 0.5183 | 0.6559 | 0.3674 | 0.067* | |
C16 | 0.7045 (3) | 0.6870 (3) | 0.3966 (3) | 0.0519 (6) | |
H16 | 0.7597 | 0.6584 | 0.3286 | 0.062* | |
C10 | 0.2687 (3) | 0.9042 (4) | 0.8264 (3) | 0.0639 (8) | |
H10 | 0.1721 | 0.9122 | 0.8494 | 0.077* | |
C9 | 0.3512 (3) | 0.9523 (3) | 0.8855 (3) | 0.0580 (7) | |
H9 | 0.3123 | 0.9941 | 0.9488 | 0.070* | |
O7 | 0.0594 (2) | 0.8327 (2) | 0.2079 (2) | 0.0695 (6) | |
H5WA | 0.783 (3) | 1.123 (3) | 0.603 (3) | 0.065 (9)* | |
H5WB | 0.8838 (18) | 1.097 (3) | 0.506 (2) | 0.067 (9)* | |
H6WA | 0.812 (2) | 0.279 (3) | 0.693 (3) | 0.058 (9)* | |
H6WB | 0.801 (3) | 0.361 (3) | 0.5646 (18) | 0.093 (13)* | |
H7WB | 0.017 (3) | 0.826 (4) | 0.153 (3) | 0.081 (11)* | |
H7WA | 0.089 (3) | 0.9218 (15) | 0.173 (3) | 0.079 (11)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O6 | 0.0564 (12) | 0.0771 (14) | 0.0568 (13) | 0.0114 (11) | −0.0178 (11) | −0.0302 (12) |
Co1 | 0.02315 (16) | 0.02983 (17) | 0.03057 (17) | 0.00095 (11) | −0.00340 (11) | −0.01210 (12) |
O1 | 0.0436 (9) | 0.0335 (8) | 0.0397 (9) | 0.0012 (7) | −0.0124 (7) | −0.0171 (7) |
O4 | 0.0245 (7) | 0.0313 (8) | 0.0426 (9) | −0.0004 (6) | 0.0022 (6) | −0.0090 (7) |
O5W | 0.0407 (9) | 0.0309 (9) | 0.0401 (9) | −0.0018 (7) | 0.0028 (8) | −0.0099 (7) |
N2 | 0.0288 (9) | 0.0360 (10) | 0.0335 (10) | 0.0051 (7) | −0.0049 (7) | −0.0146 (8) |
N1 | 0.0245 (8) | 0.0269 (9) | 0.0319 (9) | −0.0012 (7) | −0.0011 (7) | −0.0115 (7) |
N3 | 0.0304 (9) | 0.0371 (10) | 0.0323 (9) | 0.0042 (7) | −0.0060 (7) | −0.0152 (8) |
C2 | 0.0266 (10) | 0.0238 (10) | 0.0294 (10) | −0.0016 (8) | −0.0012 (8) | −0.0058 (8) |
C4 | 0.0264 (11) | 0.0399 (13) | 0.0388 (12) | 0.0027 (9) | −0.0020 (9) | −0.0152 (10) |
C13 | 0.0313 (11) | 0.0364 (12) | 0.0343 (11) | 0.0029 (9) | −0.0093 (9) | −0.0120 (10) |
C1 | 0.0363 (12) | 0.0345 (12) | 0.0349 (12) | −0.0045 (9) | 0.0041 (10) | −0.0183 (10) |
C18 | 0.0287 (11) | 0.0297 (11) | 0.0405 (12) | 0.0005 (8) | 0.0005 (9) | −0.0140 (10) |
O3 | 0.0806 (14) | 0.0699 (13) | 0.0691 (13) | 0.0073 (10) | −0.0441 (11) | −0.0383 (11) |
O2 | 0.0363 (9) | 0.0475 (10) | 0.0686 (12) | 0.0110 (8) | 0.0121 (8) | −0.0132 (9) |
C12 | 0.0292 (11) | 0.0381 (12) | 0.0363 (12) | 0.0044 (9) | −0.0085 (9) | −0.0112 (10) |
C6 | 0.0279 (11) | 0.0437 (13) | 0.0365 (12) | −0.0024 (9) | −0.0056 (9) | −0.0184 (10) |
C3 | 0.0333 (11) | 0.0365 (12) | 0.0403 (12) | −0.0067 (9) | −0.0012 (10) | −0.0204 (10) |
C19 | 0.0263 (10) | 0.0380 (12) | 0.0335 (11) | 0.0015 (9) | −0.0074 (9) | −0.0100 (9) |
C11 | 0.0312 (13) | 0.083 (2) | 0.0682 (18) | 0.0081 (13) | −0.0134 (12) | −0.0402 (16) |
C14 | 0.0407 (13) | 0.0664 (17) | 0.0590 (16) | 0.0074 (12) | −0.0213 (12) | −0.0334 (14) |
C8 | 0.0392 (13) | 0.0562 (15) | 0.0504 (14) | 0.0111 (11) | −0.0074 (11) | −0.0312 (13) |
C17 | 0.0379 (12) | 0.0530 (14) | 0.0373 (13) | 0.0081 (11) | −0.0058 (10) | −0.0217 (11) |
C15 | 0.0626 (17) | 0.0653 (18) | 0.0574 (16) | 0.0084 (14) | −0.0292 (14) | −0.0347 (14) |
C16 | 0.0633 (17) | 0.0578 (16) | 0.0413 (14) | 0.0131 (13) | −0.0136 (12) | −0.0279 (13) |
C10 | 0.0311 (13) | 0.088 (2) | 0.074 (2) | 0.0175 (13) | −0.0064 (13) | −0.0403 (18) |
C9 | 0.0442 (15) | 0.0730 (19) | 0.0609 (17) | 0.0196 (13) | −0.0025 (13) | −0.0399 (15) |
O7 | 0.0821 (15) | 0.0542 (13) | 0.0767 (15) | −0.0127 (11) | −0.0448 (12) | −0.0140 (11) |
Geometric parameters (Å, º) top
Co1—N1 | 2.2828 (17) | C18—H18B | 0.9700 |
Co1—N2 | 2.1345 (17) | O3—C6 | 1.224 (3) |
Co1—N3 | 2.1268 (17) | C12—C11 | 1.382 (3) |
Co1—O1 | 2.0366 (15) | C6—C19 | 1.517 (3) |
Co1—O4 | 2.0642 (14) | C3—C1i | 1.387 (3) |
Co1—O5W | 2.0752 (16) | C3—H1 | 0.9300 |
O1—C6 | 1.265 (3) | C19—H19A | 0.9700 |
O4—C4 | 1.281 (3) | C19—H19B | 0.9700 |
O5W—H5WA | 0.84 (3) | C11—C10 | 1.373 (4) |
O5W—H5WB | 0.846 (19) | C11—H11 | 0.9300 |
N2—C8 | 1.334 (3) | C14—C15 | 1.375 (4) |
N2—C12 | 1.341 (3) | C14—H14 | 0.9300 |
N1—C2 | 1.441 (2) | C8—C9 | 1.374 (3) |
N1—C18 | 1.477 (3) | C8—H8 | 0.9300 |
N1—C19 | 1.479 (3) | C17—C16 | 1.374 (3) |
N3—C17 | 1.339 (3) | C17—H17 | 0.9300 |
N3—C13 | 1.348 (3) | C15—C16 | 1.369 (4) |
C2—C1 | 1.384 (3) | C15—H15 | 0.9300 |
C2—C3 | 1.387 (3) | C16—H16 | 0.9300 |
C4—O2 | 1.226 (3) | C10—C9 | 1.364 (4) |
C4—C18 | 1.515 (3) | C10—H10 | 0.9300 |
C13—C14 | 1.376 (3) | C9—H9 | 0.9300 |
C13—C12 | 1.486 (3) | O6—H6WA | 0.84 (2) |
C1—C3i | 1.387 (3) | O6—H6WB | 0.85 (2) |
C1—H4 | 0.9300 | O7—H7WB | 0.83 (3) |
C18—H18A | 0.9700 | O7—H7WA | 0.84 (2) |
| | | |
H6WA—O6—H6WB | 104 (3) | N1—C18—H18A | 109.6 |
O1—Co1—O4 | 97.82 (6) | C4—C18—H18A | 109.6 |
O1—Co1—O5W | 91.47 (6) | N1—C18—H18B | 109.6 |
O4—Co1—O5W | 95.18 (6) | C4—C18—H18B | 109.6 |
O1—Co1—N3 | 165.84 (6) | H18A—C18—H18B | 108.1 |
O4—Co1—N3 | 93.84 (6) | N2—C12—C11 | 121.2 (2) |
O5W—Co1—N3 | 95.47 (7) | N2—C12—C13 | 115.21 (18) |
O1—Co1—N2 | 91.37 (6) | C11—C12—C13 | 123.6 (2) |
O4—Co1—N2 | 169.70 (6) | O3—C6—O1 | 124.9 (2) |
O5W—Co1—N2 | 89.20 (7) | O3—C6—C19 | 117.3 (2) |
N3—Co1—N2 | 76.44 (7) | O1—C6—C19 | 117.76 (18) |
O1—Co1—N1 | 78.75 (6) | C1i—C3—C2 | 121.9 (2) |
O4—Co1—N1 | 75.90 (6) | C1i—C3—H1 | 117.5 |
O5W—Co1—N1 | 165.56 (6) | C2—C3—H1 | 120.6 |
N3—Co1—N1 | 96.44 (6) | N1—C19—C6 | 114.87 (17) |
N2—Co1—N1 | 101.52 (6) | N1—C19—H19A | 108.5 |
C6—O1—Co1 | 118.95 (13) | C6—C19—H19A | 108.5 |
C4—O4—Co1 | 118.27 (13) | N1—C19—H19B | 108.5 |
Co1—O5W—H5WA | 115 (2) | C6—C19—H19B | 108.5 |
Co1—O5W—H5WB | 124 (2) | H19A—C19—H19B | 107.5 |
H5WA—O5W—H5WB | 107 (3) | C10—C11—C12 | 119.5 (2) |
C8—N2—C12 | 118.31 (19) | C10—C11—H11 | 120.3 |
C8—N2—Co1 | 125.32 (16) | C12—C11—H11 | 120.3 |
C12—N2—Co1 | 116.32 (14) | C15—C14—C13 | 119.4 (2) |
C2—N1—C18 | 117.09 (16) | C15—C14—H14 | 120.3 |
C2—N1—C19 | 114.13 (16) | C13—C14—H14 | 120.3 |
C18—N1—C19 | 110.06 (16) | N2—C8—C9 | 123.2 (2) |
C2—N1—Co1 | 107.95 (12) | N2—C8—H8 | 118.4 |
C18—N1—Co1 | 102.15 (12) | C9—C8—H8 | 118.4 |
C19—N1—Co1 | 103.86 (11) | N3—C17—C16 | 123.2 (2) |
C17—N3—C13 | 117.94 (19) | N3—C17—H17 | 118.4 |
C17—N3—Co1 | 125.82 (15) | C16—C17—H17 | 118.4 |
C13—N3—Co1 | 116.24 (14) | C16—C15—C14 | 119.4 (2) |
C1—C2—C3 | 117.59 (19) | C16—C15—H15 | 120.3 |
C1—C2—N1 | 122.48 (18) | C14—C15—H15 | 120.3 |
C3—C2—N1 | 119.73 (18) | C15—C16—C17 | 118.4 (2) |
O2—C4—O4 | 124.7 (2) | C15—C16—H16 | 120.8 |
O2—C4—C18 | 118.93 (19) | C17—C16—H16 | 120.8 |
O4—C4—C18 | 116.33 (17) | C9—C10—C11 | 119.4 (2) |
N3—C13—C14 | 121.6 (2) | C9—C10—H10 | 120.3 |
N3—C13—C12 | 115.44 (18) | C11—C10—H10 | 120.3 |
C14—C13—C12 | 122.9 (2) | C10—C9—C8 | 118.3 (2) |
C2—C1—C3i | 120.5 (2) | C10—C9—H9 | 120.8 |
C2—C1—H4 | 122.2 | C8—C9—H9 | 120.8 |
C3i—C1—H4 | 117.3 | H7WB—O7—H7WA | 106 (3) |
N1—C18—C4 | 110.16 (17) | | |
Symmetry code: (i) −x+1, −y+1, −z+2. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O5W—H5WA···O6ii | 0.84 (3) | 2.06 (3) | 2.879 (4) | 166 (3) |
O5W—H5WB···O4iii | 0.85 (2) | 1.87 (2) | 2.699 (2) | 165 (3) |
O6—H6WA···O7iv | 0.84 (2) | 1.88 (3) | 2.701 (3) | 165 (3) |
O6—H6WB···O2v | 0.85 (2) | 2.07 (2) | 2.862 (3) | 155 (3) |
O7—H7WA···O1vi | 0.84 (2) | 2.06 (2) | 2.871 (3) | 161 (3) |
O7—H7WB···O3vii | 0.83 (3) | 1.93 (3) | 2.757 (3) | 172 (3) |
Symmetry codes: (ii) x, y+1, z; (iii) −x+2, −y+2, −z+1; (iv) −x+1, −y+1, −z+1; (v) −x+2, −y+1, −z+1; (vi) −x+1, −y+2, −z+1; (vii) x−1, y, z−1. |