The asymmetric unit of the title compound, (C6H22N4)[Cu2(C2O4)4(H2O)2], contains one-half of a C6H22N44+ cation and one-half of a [Cu2(ox)4(H2O)2]4− anion (ox is oxalate). The [Cu(ox)2(H2O)]2− units dimerize around an inversion center, giving an octahedrally distorted CuO6 coordination. The cation is also centrosymmetric. Extensive hydrogen bonding between the oxalate, the coordinated water molecules and the cations determines the crystal packing and may explain the strong interactions observed between the chelate Cu(ox)2 planes of the [Cu2(ox)4(H2O)2]4− anion.
Supporting information
CCDC reference: 618185
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean (C-C) = 0.004 Å
- R factor = 0.031
- wR factor = 0.079
- Data-to-parameter ratio = 13.2
checkCIF/PLATON results
No syntax errors found
Alert level B
PLAT029_ALERT_3_B _diffrn_measured_fraction_theta_full Low ....... 0.95
PLAT232_ALERT_2_B Hirshfeld Test Diff (M-X) Cu1 - O9 .. 15.30 su
Alert level C
PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ?
PLAT062_ALERT_4_C Rescale T(min) & T(max) by ..................... 0.97
PLAT369_ALERT_2_C Long C(sp2)-C(sp2) Bond C1 - C2 ... 1.55 Ang.
PLAT369_ALERT_2_C Long C(sp2)-C(sp2) Bond C3 - C4 ... 1.55 Ang.
0 ALERT level A = In general: serious problem
2 ALERT level B = Potentially serious problem
4 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
3 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
1 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
Data collection: SMART (Bruker,2000); cell refinement: SAINT (Bruker,2000); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL/PC (Sheldrick, 1999) and ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXTL/PC.
N,
N'-(2-Ammonioethyl)ethane-1,2-diaminium
di-µ
2-oxalato-bis[aquaoxalatocuprate(II)]
top
Crystal data top
(C6H22N4)[Cu2(C2O4)4(H2O)2] | F(000) = 680 |
Mr = 665.47 | Dx = 1.946 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 2738 reflections |
a = 9.736 (2) Å | θ = 2.4–26.8° |
b = 14.089 (3) Å | µ = 1.97 mm−1 |
c = 9.398 (2) Å | T = 298 K |
β = 118.263 (2)° | Pillar, blue |
V = 1135.4 (4) Å3 | 0.30 × 0.20 × 0.20 mm |
Z = 2 | |
Data collection top
Bruker SMART CCD area-detector diffractometer | 2356 independent reflections |
Radiation source: fine-focus sealed tube | 1971 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.024 |
ω scans | θmax = 27.0°, θmin = 2.4° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2000) | h = −12→12 |
Tmin = 0.589, Tmax = 0.694 | k = −17→16 |
6026 measured reflections | l = −10→11 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.031 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.079 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.98 | w = 1/[σ2(Fo2) + (0.0472P)2] where P = (Fo2 + 2Fc2)/3 |
2356 reflections | (Δ/σ)max = 0.001 |
179 parameters | Δρmax = 0.42 e Å−3 |
3 restraints | Δρmin = −0.52 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Cu1 | 0.67072 (3) | 0.447150 (19) | 0.63152 (4) | 0.02676 (12) | |
O1 | 0.87265 (17) | 0.49937 (11) | 0.6813 (2) | 0.0283 (4) | |
O2 | 1.04204 (19) | 0.60478 (12) | 0.8485 (2) | 0.0386 (5) | |
O3 | 0.68240 (19) | 0.52977 (11) | 0.8024 (2) | 0.0306 (4) | |
O4 | 0.8555 (2) | 0.62055 (12) | 0.9963 (2) | 0.0397 (4) | |
O5 | 0.66899 (18) | 0.35806 (11) | 0.4728 (2) | 0.0316 (4) | |
O6 | 0.5435 (2) | 0.22460 (13) | 0.3603 (3) | 0.0478 (5) | |
O7 | 0.45966 (17) | 0.40441 (11) | 0.5627 (2) | 0.0279 (4) | |
O8 | 0.30585 (19) | 0.28514 (12) | 0.4191 (2) | 0.0381 (4) | |
C1 | 0.9210 (3) | 0.55863 (15) | 0.7968 (3) | 0.0266 (5) | |
C2 | 0.8119 (3) | 0.57191 (16) | 0.8734 (3) | 0.0274 (5) | |
C3 | 0.4270 (3) | 0.33036 (15) | 0.4737 (3) | 0.0265 (5) | |
C4 | 0.5565 (3) | 0.30050 (16) | 0.4309 (3) | 0.0290 (5) | |
O9 | 0.8046 (2) | 0.31789 (15) | 0.8263 (2) | 0.0443 (5) | |
H91 | 0.869 (3) | 0.340 (2) | 0.914 (2) | 0.066* | |
H92 | 0.726 (2) | 0.303 (2) | 0.833 (4) | 0.066* | |
C5 | 0.1162 (3) | 0.34644 (18) | 0.6109 (3) | 0.0378 (6) | |
H5A | 0.0486 | 0.3584 | 0.4969 | 0.045* | |
H5B | 0.1915 | 0.2986 | 0.6196 | 0.045* | |
C6 | 0.2019 (3) | 0.43683 (16) | 0.6897 (3) | 0.0323 (6) | |
H6A | 0.2388 | 0.4663 | 0.6208 | 0.039* | |
H6B | 0.1299 | 0.4805 | 0.6997 | 0.039* | |
C7 | 0.4265 (3) | 0.51012 (17) | 0.9218 (3) | 0.0336 (6) | |
H7A | 0.3618 | 0.5547 | 0.9419 | 0.040* | |
H7B | 0.4538 | 0.5386 | 0.8446 | 0.040* | |
N1 | 0.0201 (2) | 0.30836 (14) | 0.6837 (3) | 0.0349 (5) | |
H1A | 0.0770 | 0.3074 | 0.7908 | 0.052* | |
H1B | −0.0109 | 0.2497 | 0.6478 | 0.052* | |
H1C | −0.0629 | 0.3453 | 0.6559 | 0.052* | |
N2 | 0.3378 (2) | 0.42038 (14) | 0.8535 (2) | 0.0308 (5) | |
H2A | 0.3033 | 0.3976 | 0.9203 | 0.037* | |
H2B | 0.4016 | 0.3767 | 0.8461 | 0.037* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cu1 | 0.02250 (18) | 0.03177 (19) | 0.02784 (19) | −0.00245 (11) | 0.01340 (14) | −0.00609 (12) |
O1 | 0.0242 (8) | 0.0329 (9) | 0.0296 (9) | −0.0022 (7) | 0.0143 (7) | −0.0061 (7) |
O2 | 0.0268 (9) | 0.0410 (10) | 0.0458 (12) | −0.0073 (8) | 0.0154 (9) | −0.0117 (9) |
O3 | 0.0281 (9) | 0.0385 (9) | 0.0302 (10) | −0.0045 (7) | 0.0178 (8) | −0.0075 (8) |
O4 | 0.0454 (11) | 0.0445 (10) | 0.0299 (10) | −0.0065 (8) | 0.0182 (9) | −0.0117 (8) |
O5 | 0.0261 (9) | 0.0380 (9) | 0.0343 (10) | −0.0050 (7) | 0.0171 (8) | −0.0099 (8) |
O6 | 0.0442 (11) | 0.0421 (11) | 0.0682 (15) | −0.0124 (9) | 0.0357 (11) | −0.0261 (10) |
O7 | 0.0221 (8) | 0.0315 (9) | 0.0315 (9) | −0.0018 (7) | 0.0138 (7) | −0.0053 (7) |
O8 | 0.0291 (9) | 0.0384 (10) | 0.0481 (12) | −0.0085 (8) | 0.0194 (9) | −0.0105 (9) |
C1 | 0.0245 (12) | 0.0265 (12) | 0.0280 (13) | 0.0025 (9) | 0.0118 (11) | 0.0015 (10) |
C2 | 0.0324 (13) | 0.0259 (12) | 0.0241 (13) | 0.0035 (10) | 0.0136 (11) | 0.0022 (10) |
C3 | 0.0265 (12) | 0.0263 (12) | 0.0266 (13) | 0.0006 (10) | 0.0125 (11) | 0.0012 (10) |
C4 | 0.0282 (13) | 0.0314 (12) | 0.0274 (13) | −0.0013 (10) | 0.0130 (11) | −0.0039 (10) |
O9 | 0.0385 (12) | 0.0551 (12) | 0.0390 (11) | −0.0131 (9) | 0.0181 (9) | −0.0029 (10) |
C5 | 0.0382 (14) | 0.0477 (15) | 0.0302 (14) | −0.0026 (12) | 0.0183 (12) | −0.0048 (12) |
C6 | 0.0322 (13) | 0.0362 (14) | 0.0319 (14) | 0.0052 (11) | 0.0179 (11) | 0.0055 (11) |
C7 | 0.0297 (13) | 0.0324 (13) | 0.0418 (16) | −0.0023 (11) | 0.0194 (12) | 0.0032 (12) |
N1 | 0.0327 (12) | 0.0323 (11) | 0.0353 (12) | 0.0000 (9) | 0.0124 (10) | −0.0034 (9) |
N2 | 0.0285 (11) | 0.0317 (10) | 0.0354 (13) | −0.0009 (8) | 0.0178 (10) | 0.0012 (9) |
Geometric parameters (Å, º) top
Cu1—O7 | 1.935 (2) | O9—H92 | 0.82 (3) |
Cu1—O1 | 1.938 (2) | C5—N1 | 1.496 (3) |
Cu1—O3 | 1.943 (2) | C5—C6 | 1.511 (3) |
Cu1—O5 | 1.944 (2) | C5—H5A | 0.9700 |
Cu1—O9 | 2.471 (2) | C5—H5B | 0.9700 |
Cu1—Cu1i | 3.405 (1) | C6—N2 | 1.498 (3) |
O1—C1 | 1.270 (3) | C6—H6A | 0.9700 |
O2—C1 | 1.227 (3) | C6—H6B | 0.9700 |
O3—C2 | 1.261 (3) | C7—N2 | 1.494 (3) |
O4—C2 | 1.233 (3) | C7—C7ii | 1.516 (5) |
O5—C4 | 1.266 (3) | C7—H7A | 0.9700 |
O6—C4 | 1.233 (3) | C7—H7B | 0.9700 |
O7—C3 | 1.279 (3) | N1—H1A | 0.8900 |
O8—C3 | 1.219 (3) | N1—H1B | 0.8900 |
C1—C2 | 1.551 (3) | N1—H1C | 0.8900 |
C3—C4 | 1.553 (3) | N2—H2A | 0.9000 |
O9—H91 | 0.82 (3) | N2—H2B | 0.9000 |
| | | |
O7—Cu1—O1 | 173.88 (7) | C6—C5—H5B | 108.9 |
O7—Cu1—O3 | 95.74 (7) | H5A—C5—H5B | 107.7 |
O1—Cu1—O3 | 85.26 (7) | N2—C6—C5 | 112.8 (2) |
O7—Cu1—O5 | 85.44 (7) | N2—C6—H6A | 109.0 |
O1—Cu1—O5 | 94.00 (6) | C5—C6—H6A | 109.0 |
O3—Cu1—O5 | 175.80 (7) | N2—C6—H6B | 109.0 |
C1—O1—Cu1 | 112.30 (14) | C5—C6—H6B | 109.0 |
C2—O3—Cu1 | 111.81 (15) | H6A—C6—H6B | 107.8 |
C4—O5—Cu1 | 110.13 (14) | N2—C7—C7ii | 110.2 (2) |
C3—O7—Cu1 | 111.63 (14) | N2—C7—H7A | 109.6 |
O2—C1—O1 | 125.8 (2) | C7ii—C7—H7A | 109.6 |
O2—C1—C2 | 119.5 (2) | N2—C7—H7B | 109.6 |
O1—C1—C2 | 114.7 (2) | C7ii—C7—H7B | 109.6 |
O4—C2—O3 | 124.9 (2) | H7A—C7—H7B | 108.1 |
O4—C2—C1 | 119.6 (2) | C5—N1—H1A | 109.5 |
O3—C2—C1 | 115.5 (2) | C5—N1—H1B | 109.5 |
O8—C3—O7 | 126.4 (2) | H1A—N1—H1B | 109.5 |
O8—C3—C4 | 119.5 (2) | C5—N1—H1C | 109.5 |
O7—C3—C4 | 114.14 (19) | H1A—N1—H1C | 109.5 |
O6—C4—O5 | 125.2 (2) | H1B—N1—H1C | 109.5 |
O6—C4—C3 | 119.0 (2) | C7—N2—C6 | 111.12 (18) |
O5—C4—C3 | 115.8 (2) | C7—N2—H2A | 109.4 |
H91—O9—H92 | 109 (2) | C6—N2—H2A | 109.4 |
N1—C5—C6 | 113.4 (2) | C7—N2—H2B | 109.4 |
N1—C5—H5A | 108.9 | C6—N2—H2B | 109.4 |
C6—C5—H5A | 108.9 | H2A—N2—H2B | 108.0 |
N1—C5—H5B | 108.9 | | |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1, −y+1, −z+2. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2B···O6iii | 0.90 | 1.95 | 2.840 (3) | 172 |
N2—H2A···O8iii | 0.90 | 2.57 | 3.007 (3) | 110 |
N2—H2A···O4ii | 0.90 | 2.05 | 2.895 (3) | 155 |
N1—H1C···O9iv | 0.89 | 2.52 | 2.979 (3) | 113 |
N1—H1C···O5iv | 0.89 | 2.36 | 3.113 (3) | 143 |
N1—H1C···O1iv | 0.89 | 2.30 | 3.045 (2) | 141 |
N1—H1B···O2v | 0.89 | 2.07 | 2.917 (3) | 160 |
N1—H1A···O8iii | 0.89 | 2.36 | 2.922 (3) | 121 |
N1—H1A···O4ii | 0.89 | 2.05 | 2.840 (3) | 147 |
O9—H92···O6iii | 0.82 (3) | 1.95 (3) | 2.773 (3) | 175 (3) |
O9—H91···O4vi | 0.82 (3) | 2.46 (2) | 3.043 (3) | 128 (2) |
O9—H91···O2vi | 0.82 (3) | 2.12 (2) | 2.905 (3) | 158 (3) |
Symmetry codes: (ii) −x+1, −y+1, −z+2; (iii) x, −y+1/2, z+1/2; (iv) x−1, y, z; (v) −x+1, y−1/2, −z+3/2; (vi) −x+2, −y+1, −z+2. |