metal-organic compounds
The chain structure of the title compound, [Cu(C12H8N3)]n, consists of alternating 2-(2-pyridyl)-1H-benzimidazolate anions and copper(I) cations. The chain, which has the CuI atom in a linear coordination geometry, runs along the a axis of the monoclinic unit cell.
Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536806031321/bt2159sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536806031321/bt2159Isup2.hkl |
CCDC reference: 620687
Key indicators
- Single-crystal X-ray study
- T = 295 K
- Mean () = 0.000 Å
- Disorder in main residue
- R factor = 0.041
- wR factor = 0.125
- Data-to-parameter ratio = 9.4
checkCIF/PLATON results
No syntax errors found
Alert level B PLAT301_ALERT_3_B Main Residue Disorder ......................... 48.00 Perc.
Alert level C PLAT088_ALERT_3_C Poor Data / Parameter Ratio .................... 9.40 PLAT152_ALERT_1_C Supplied and Calc Volume s.u. Inconsistent ..... ? PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 2.53 Ratio PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for N3 PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for N6 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C24
0 ALERT level A = In general: serious problem 1 ALERT level B = Potentially serious problem 6 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 4 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
Computing details top
Data collection: SMART (Bruker, 2004); cell refinement: SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97.
Crystal data top
[Cu(C12H8N3)] | F(000) = 520 |
Mr = 257.75 | Dx = 1.707 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 886 reflections |
a = 5.858 (1) Å | θ = 2.8–27.0° |
b = 22.090 (3) Å | µ = 2.15 mm−1 |
c = 8.212 (1) Å | T = 295 K |
β = 109.255 (2)° | Rod, yellow |
V = 1003.2 (2) Å3 | 0.21 × 0.12 × 0.10 mm |
Z = 4 |
Data collection top
Bruker SMART 1K area-detector diffractometer | 2181 independent reflections |
Radiation source: fine-focus sealed tube | 1913 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.018 |
φ and ω scans | θmax = 27.0°, θmin = 2.8° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −7→7 |
Tmin = 0.661, Tmax = 0.814 | k = −25→28 |
6798 measured reflections | l = −10→10 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.041 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.125 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.084P)2 + 0.692P] where P = (Fo2 + 2Fc2)/3 |
2181 reflections | (Δ/σ)max = 0.001 |
232 parameters | Δρmax = 0.53 e Å−3 |
200 restraints | Δρmin = −0.50 e Å−3 |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cu1 | 0.71214 (6) | 0.53306 (2) | 0.70560 (5) | 0.0371 (2) | |
N1 | 0.4132 (7) | 0.5089 (2) | 0.7310 (6) | 0.032 (1) | 0.50 |
N2 | 0.0394 (7) | 0.5130 (2) | 0.7431 (6) | 0.032 (1) | 0.50 |
N3 | 0.2609 (7) | 0.6171 (2) | 0.4830 (5) | 0.053 (1) | 0.50 |
N4 | 1.0094 (8) | 0.5532 (2) | 0.6777 (7) | 0.037 (1) | 0.50 |
N5 | 1.3862 (7) | 0.5547 (2) | 0.6723 (7) | 0.035 (1) | 0.50 |
N6 | 1.1388 (8) | 0.4468 (2) | 0.9032 (6) | 0.052 (2) | 0.50 |
C1 | 0.3751 (7) | 0.4574 (2) | 0.8091 (5) | 0.033 (1) | 0.50 |
C2 | 0.5226 (6) | 0.4086 (2) | 0.8832 (6) | 0.041 (1) | 0.50 |
C3 | 0.4372 (8) | 0.3632 (2) | 0.9653 (7) | 0.052 (2) | 0.50 |
C4 | 0.2043 (9) | 0.3667 (2) | 0.9734 (7) | 0.048 (2) | 0.50 |
C5 | 0.0567 (7) | 0.4155 (2) | 0.8993 (7) | 0.047 (2) | 0.50 |
C6 | 0.1421 (6) | 0.4608 (2) | 0.8172 (6) | 0.033 (1) | 0.50 |
C7 | 0.210 (1) | 0.5415 (3) | 0.6953 (17) | 0.029 (2) | 0.50 |
C8 | 0.1723 (8) | 0.6011 (1) | 0.6147 (5) | 0.028 (1) | 0.50 |
C9 | 0.0411 (8) | 0.6428 (2) | 0.6748 (5) | 0.038 (1) | 0.50 |
C10 | −0.0016 (8) | 0.7004 (2) | 0.6034 (6) | 0.032 (1) | 0.50 |
C11 | 0.0870 (9) | 0.7164 (1) | 0.4717 (6) | 0.052 (2) | 0.50 |
C12 | 0.2182 (9) | 0.6748 (2) | 0.4116 (6) | 0.046 (1) | 0.50 |
C13 | 1.0465 (7) | 0.6074 (2) | 0.6141 (6) | 0.039 (1) | 0.50 |
C14 | 0.8948 (6) | 0.6566 (2) | 0.5518 (8) | 0.061 (2) | 0.50 |
C15 | 0.9794 (8) | 0.7069 (2) | 0.4875 (9) | 0.072 (3) | 0.50 |
C16 | 1.2157 (9) | 0.7080 (2) | 0.4856 (8) | 0.062 (2) | 0.50 |
C17 | 1.3675 (6) | 0.6589 (2) | 0.5479 (7) | 0.048 (2) | 0.50 |
C18 | 1.2829 (6) | 0.6085 (2) | 0.6121 (6) | 0.034 (1) | 0.50 |
C19 | 1.217 (1) | 0.5225 (3) | 0.710 (2) | 0.029 (2) | 0.50 |
C20 | 1.2554 (9) | 0.4616 (1) | 0.7861 (6) | 0.031 (1) | 0.50 |
C21 | 1.4006 (8) | 0.4191 (2) | 0.7427 (5) | 0.041 (1) | 0.50 |
C22 | 1.4290 (8) | 0.3617 (2) | 0.8163 (6) | 0.047 (2) | 0.50 |
C23 | 1.3123 (9) | 0.3469 (2) | 0.9334 (6) | 0.052 (2) | 0.50 |
C24 | 1.1672 (9) | 0.3894 (2) | 0.9768 (6) | 0.032 (2) | 0.50 |
H2 | 0.6784 | 0.4063 | 0.8777 | 0.049* | 0.50 |
H3 | 0.5359 | 0.3306 | 1.0148 | 0.062* | 0.50 |
H4 | 0.1471 | 0.3363 | 1.0283 | 0.057* | 0.50 |
H5 | −0.0991 | 0.4178 | 0.9047 | 0.056* | 0.50 |
H9 | −0.0181 | 0.6321 | 0.7629 | 0.045* | 0.50 |
H10 | −0.0894 | 0.7283 | 0.6436 | 0.038* | 0.50 |
H11 | 0.0584 | 0.7550 | 0.4239 | 0.063* | 0.50 |
H12 | 0.2774 | 0.6855 | 0.3235 | 0.055* | 0.50 |
H14 | 0.7367 | 0.6558 | 0.5530 | 0.073* | 0.50 |
H15 | 0.8779 | 0.7398 | 0.4458 | 0.086* | 0.50 |
H16 | 1.2723 | 0.7417 | 0.4426 | 0.074* | 0.50 |
H17 | 1.5256 | 0.6596 | 0.5466 | 0.058* | 0.50 |
H21 | 1.4786 | 0.4290 | 0.6644 | 0.049* | 0.50 |
H22 | 1.5261 | 0.3333 | 0.7873 | 0.056* | 0.50 |
H23 | 1.3313 | 0.3085 | 0.9826 | 0.062* | 0.50 |
H24 | 1.0891 | 0.3795 | 1.0551 | 0.039* | 0.50 |
Atomic displacement parameters (Å2) top
U11 | U22 | U33 | U12 | U13 | U23 | |
Cu1 | 0.0195 (2) | 0.0444 (3) | 0.0518 (3) | 0.0022 (1) | 0.0179 (2) | 0.0032 (2) |
N1 | 0.021 (2) | 0.038 (2) | 0.039 (2) | −0.002 (2) | 0.015 (2) | −0.002 (2) |
N2 | 0.019 (2) | 0.036 (2) | 0.043 (3) | 0.001 (2) | 0.013 (2) | 0.001 (2) |
C1 | 0.022 (3) | 0.038 (3) | 0.043 (3) | −0.003 (3) | 0.017 (3) | −0.005 (2) |
C2 | 0.029 (3) | 0.044 (3) | 0.050 (3) | 0.007 (2) | 0.013 (2) | −0.003 (3) |
C3 | 0.051 (4) | 0.033 (3) | 0.065 (4) | 0.004 (3) | 0.011 (3) | 0.006 (3) |
C4 | 0.050 (4) | 0.023 (4) | 0.067 (4) | 0.001 (3) | 0.014 (3) | 0.014 (3) |
C5 | 0.039 (4) | 0.036 (3) | 0.069 (4) | −0.007 (3) | 0.023 (3) | −0.001 (3) |
C6 | 0.024 (3) | 0.040 (3) | 0.037 (3) | 0.002 (2) | 0.015 (3) | −0.001 (2) |
C7 | 0.028 (4) | 0.026 (5) | 0.033 (3) | −0.001 (3) | 0.011 (3) | −0.003 (4) |
C8 | 0.015 (3) | 0.036 (3) | 0.039 (3) | −0.001 (3) | 0.015 (3) | 0.000 (2) |
C9 | 0.036 (3) | 0.043 (3) | 0.038 (3) | 0.001 (3) | 0.017 (2) | −0.002 (3) |
C10 | 0.034 (3) | 0.027 (3) | 0.041 (3) | 0.007 (2) | 0.021 (2) | 0.001 (2) |
C11 | 0.048 (4) | 0.051 (4) | 0.063 (4) | 0.004 (4) | 0.026 (4) | 0.012 (3) |
C12 | 0.050 (4) | 0.046 (3) | 0.049 (3) | 0.000 (3) | 0.027 (3) | 0.012 (3) |
N3 | 0.042 (3) | 0.059 (3) | 0.061 (4) | 0.000 (3) | 0.022 (3) | 0.002 (3) |
N4 | 0.022 (2) | 0.041 (3) | 0.056 (3) | −0.001 (2) | 0.022 (2) | −0.003 (2) |
N5 | 0.017 (2) | 0.044 (3) | 0.046 (3) | 0.002 (2) | 0.0130 (18) | 0.002 (2) |
C13 | 0.024 (3) | 0.045 (3) | 0.053 (3) | −0.003 (3) | 0.020 (3) | −0.006 (3) |
C14 | 0.042 (4) | 0.044 (4) | 0.104 (6) | 0.008 (3) | 0.034 (4) | 0.004 (4) |
C15 | 0.063 (5) | 0.035 (4) | 0.119 (7) | 0.012 (4) | 0.031 (5) | 0.014 (4) |
C16 | 0.050 (4) | 0.040 (4) | 0.095 (6) | 0.004 (4) | 0.024 (4) | 0.013 (4) |
C17 | 0.038 (3) | 0.044 (3) | 0.067 (4) | −0.009 (3) | 0.024 (3) | −0.002 (3) |
C18 | 0.022 (3) | 0.040 (3) | 0.042 (3) | −0.001 (2) | 0.015 (3) | −0.002 (2) |
C19 | 0.022 (3) | 0.030 (5) | 0.037 (4) | 0.000 (3) | 0.012 (2) | −0.004 (4) |
C20 | 0.016 (3) | 0.040 (3) | 0.042 (3) | −0.002 (3) | 0.017 (3) | −0.002 (2) |
C21 | 0.036 (3) | 0.045 (3) | 0.049 (3) | 0.003 (2) | 0.024 (3) | 0.001 (3) |
C22 | 0.036 (3) | 0.044 (3) | 0.065 (4) | 0.005 (3) | 0.024 (3) | 0.003 (3) |
C23 | 0.048 (4) | 0.051 (4) | 0.059 (4) | 0.007 (3) | 0.021 (4) | 0.008 (3) |
C24 | 0.030 (3) | 0.031 (4) | 0.042 (3) | 0.009 (3) | 0.020 (2) | 0.016 (3) |
N6 | 0.038 (3) | 0.066 (4) | 0.052 (4) | 0.000 (3) | 0.016 (3) | −0.003 (4) |
Geometric parameters (Å, º) top
Cu1—N1 | 1.907 (4) | C14—C15 | 1.39 |
Cu1—N2i | 1.891 (4) | C15—C16 | 1.39 |
Cu1—N4 | 1.883 (4) | C15—H15 | 0.93 |
Cu1—N5ii | 1.899 (4) | C16—C17 | 1.39 |
N1—C7 | 1.340 (7) | C17—C18 | 1.39 |
N1—C1 | 1.360 (5) | C19—C20 | 1.468 (6) |
N2—C7 | 1.342 (7) | C20—C21 | 1.39 |
N2—C6 | 1.349 (5) | C20—N6 | 1.39 |
C1—C2 | 1.39 | C21—C22 | 1.39 |
C1—C6 | 1.39 | C22—C23 | 1.39 |
C2—C3 | 1.39 | C23—C24 | 1.39 |
C3—C4 | 1.39 | C24—N6 | 1.39 |
C4—C5 | 1.39 | C2—H2 | 0.93 |
C5—C6 | 1.39 | C3—H3 | 0.93 |
C7—C8 | 1.458 (6) | C4—H4 | 0.93 |
C8—C9 | 1.39 | C5—H5 | 0.93 |
C8—N3 | 1.39 | C9—H9 | 0.93 |
C9—C10 | 1.39 | C10—H10 | 0.93 |
C10—C11 | 1.39 | C11—H11 | 0.93 |
C11—C12 | 1.39 | C12—H12 | 0.93 |
C12—N3 | 1.39 | C14—H14 | 0.93 |
N4—C19 | 1.339 (7) | C16—H16 | 0.93 |
N4—C13 | 1.352 (5) | C17—H17 | 0.93 |
N5—C19 | 1.339 (7) | C21—H21 | 0.93 |
N5—C18 | 1.352 (5) | C22—H22 | 0.93 |
C13—C14 | 1.39 | C23—H23 | 0.93 |
C13—C18 | 1.39 | C24—H24 | 0.93 |
N1—Cu1—N4 | 177.4 (2) | N4—C19—C20 | 123.5 (5) |
N2i—Cu1—N5ii | 178.6 (2) | N5—C19—C20 | 124.3 (5) |
C7—N1—C1 | 106.3 (4) | C21—C20—N6 | 120.0 |
C7—N1—Cu1 | 127.5 (4) | C21—C20—C19 | 122.1 (5) |
C1—N1—Cu1 | 125.8 (3) | N6—C20—C19 | 117.9 (5) |
C7—N2—C6 | 105.6 (4) | C22—C21—C20 | 120.0 |
N1—C1—C2 | 132.8 (3) | C21—C22—C23 | 120.0 |
N1—C1—C6 | 107.1 (3) | C22—C23—C24 | 120.0 |
C2—C1—C6 | 120.0 | N6—C24—C23 | 120.0 |
C3—C2—C1 | 120.0 | C24—N6—C20 | 120.0 |
C2—C3—C4 | 120.0 | C3—C2—H2 | 120.0 |
C3—C4—C5 | 120.0 | C1—C2—H2 | 120.0 |
C6—C5—C4 | 120.0 | C2—C3—H3 | 120.0 |
N2—C6—C5 | 131.1 (3) | C4—C3—H3 | 120.0 |
N2—C6—C1 | 108.9 (3) | C3—C4—H4 | 120.0 |
C5—C6—C1 | 120.0 | C5—C4—H4 | 120.0 |
N1—C7—N2 | 112.2 (4) | C6—C5—H5 | 120.0 |
N1—C7—C8 | 125.0 (5) | C4—C5—H5 | 120.0 |
N2—C7—C8 | 122.8 (5) | C8—C9—H9 | 120.0 |
C9—C8—N3 | 120.0 | C10—C9—H9 | 120.0 |
C9—C8—C7 | 117.0 (5) | C11—C10—H10 | 120.0 |
N3—C8—C7 | 123.0 (5) | C9—C10—H10 | 120.0 |
C8—C9—C10 | 120.0 | C10—C11—H11 | 120.0 |
C11—C10—C9 | 120.0 | C12—C11—H11 | 120.0 |
C10—C11—C12 | 120.0 | N3—C12—H12 | 120.0 |
N3—C12—C11 | 120.0 | C11—C12—H12 | 120.0 |
C12—N3—C8 | 120.0 | C15—C14—H14 | 120.0 |
C19—N4—C13 | 105.9 (4) | C13—C14—H14 | 120.0 |
C19—N4—Cu1 | 132.1 (4) | C14—C15—H15 | 120.0 |
C13—N4—Cu1 | 122.0 (3) | C16—C15—H15 | 120.0 |
C19—N5—C18 | 106.0 (4) | C17—C16—H16 | 120.0 |
N4—C13—C14 | 132.0 (3) | C15—C16—H16 | 120.0 |
N4—C13—C18 | 108.0 (3) | C16—C17—H17 | 120.0 |
C14—C13—C18 | 120.0 | C18—C17—H17 | 120.0 |
C15—C14—C13 | 120.0 | C22—C21—H21 | 120.0 |
C14—C15—C16 | 120.0 | C20—C21—H21 | 120.0 |
C17—C16—C15 | 120.0 | C21—C22—H22 | 120.0 |
C16—C17—C18 | 120.0 | C23—C22—H22 | 120.0 |
N5—C18—C17 | 132.0 (3) | C22—C23—H23 | 120.0 |
N5—C18—C13 | 107.9 (3) | C24—C23—H23 | 120.0 |
C17—C18—C13 | 120.0 | N6—C24—H24 | 120.0 |
N4—C19—N5 | 112.2 (5) | C23—C24—H24 | 120.0 |
C7—N1—C1—C2 | −175.8 (7) | C19—N4—C13—C14 | 177.0 (7) |
Cu1—N1—C1—C2 | −2.8 (7) | Cu1—N4—C13—C14 | −2.9 (7) |
C7—N1—C1—C6 | 0.2 (8) | C19—N4—C13—C18 | −1.0 (8) |
Cu1—N1—C1—C6 | 173.3 (3) | Cu1—N4—C13—C18 | 179.1 (3) |
N1—C1—C2—C3 | 175.6 (5) | N4—C13—C14—C15 | −177.8 (6) |
C7—N2—C6—C5 | 175.5 (7) | C19—N5—C18—C17 | −177.3 (7) |
C7—N2—C6—C1 | −1.7 (8) | Cu1i—N5—C18—C17 | 5.6 (7) |
C4—C5—C6—N2 | −177.0 (6) | C19—N5—C18—C13 | −0.3 (8) |
N1—C1—C6—N2 | 0.9 (4) | Cu1i—N5—C18—C13 | −177.4 (3) |
C2—C1—C6—N2 | 177.6 (4) | C16—C17—C18—N5 | 176.7 (6) |
N1—C1—C6—C5 | −176.6 (4) | N4—C13—C18—N5 | 0.9 (5) |
C1—N1—C7—N2 | −1 (1) | C14—C13—C18—N5 | −177.4 (5) |
Cu1—N1—C7—N2 | −174.2 (5) | N4—C13—C18—C17 | 178.3 (5) |
C1—N1—C7—C8 | 178 (1) | C13—N4—C19—N5 | 0.9 (12) |
Cu1—N1—C7—C8 | 6 (2) | Cu1—N4—C19—N5 | −179.3 (5) |
C6—N2—C7—N1 | 2 (1) | C13—N4—C19—C20 | 178 (1) |
C6—N2—C7—C8 | −178 (1) | Cu1—N4—C19—C20 | −2 (2) |
N1—C7—C8—C9 | −142 (1) | C18—N5—C19—N4 | 0 (1) |
N2—C7—C8—C9 | 38 (1) | Cu1i—N5—C19—N4 | 176.6 (6) |
N1—C7—C8—N3 | 38 (2) | C18—N5—C19—C20 | −177 (1) |
N2—C7—C8—N3 | −141.9 (9) | Cu1i—N5—C19—C20 | −1 (2) |
C7—C8—C9—C10 | −179.9 (7) | N4—C19—C20—C21 | 146.6 (9) |
C7—C8—N3—C12 | 179.9 (7) | N5—C19—C20—C21 | −37 (2) |
N2i—Cu1—N4—C19 | 8.1 (9) | N4—C19—C20—N6 | −32 (1) |
N5ii—Cu1—N4—C19 | −174.5 (9) | N5—C19—C20—N6 | 144.4 (9) |
N2i—Cu1—N4—C13 | −172.1 (8) | C19—C20—C21—C22 | −179.1 (7) |
N5ii—Cu1—N4—C13 | 5.3 (8) | C19—C20—N6—C24 | 179.1 (7) |
Symmetry codes: (i) x+1, y, z; (ii) x−1, y, z. |