The title compound, [Cu2(C2H2IO2)4(C10H8N2)2]·0.5H2O, is a copper(II) dimer, in which two Cu atoms are joined by two oxo bridges of iodoacetate groups. The distorted square-pyramidal environment of each Cu atom is completed by two N atoms of the 2,2′-bipyridine ligands (bpy), one iodoacetate O atom and two bridging iodoacetate O atoms. The dimer lies on an inversion center midway between the two Cu atoms.
Supporting information
CCDC reference: 620723
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean (C-C) = 0.011 Å
- Disorder in solvent or counterion
- R factor = 0.047
- wR factor = 0.131
- Data-to-parameter ratio = 14.1
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT029_ALERT_3_C _diffrn_measured_fraction_theta_full Low ....... 0.97
PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ?
PLAT066_ALERT_1_C Predicted and Reported Transmissions Identical . ?
PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for O3
PLAT302_ALERT_4_C Anion/Solvent Disorder ......................... 50.00 Perc.
PLAT342_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 11
PLAT480_ALERT_4_C Long H...A H-Bond Reported H52 .. O3 .. 2.69 Ang.
Alert level G
FORMU01_ALERT_1_G There is a discrepancy between the atom counts in the
_chemical_formula_sum and _chemical_formula_moiety. This is
usually due to the moiety formula being in the wrong format.
Atom count from _chemical_formula_sum: C28 H26 Cu2 I4 N4 O9
Atom count from _chemical_formula_moiety:C28 H25 Cu2 I4 N4 O8.5
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
7 ALERT level C = Check and explain
1 ALERT level G = General alerts; check
3 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
1 ALERT type 2 Indicator that the structure model may be wrong or deficient
2 ALERT type 3 Indicator that the structure quality may be low
2 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
Data collection: SMART (Bruker, 2000); cell refinement: SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 2000); software used to prepare material for publication: SHELXTL.
Di-µ-iodoacetato-bis[(2,2'-bipyridyl)(iodoacetato)copper(II)] hemihydrate
top
Crystal data top
[Cu2(C2H2IO2)4(C10H8N2)2]·0.5H2O | Z = 1 |
Mr = 1197.21 | F(000) = 564 |
Triclinic, P1 | Dx = 2.223 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 9.447 (3) Å | Cell parameters from 2929 reflections |
b = 9.631 (4) Å | θ = 2.3–27.0° |
c = 10.410 (4) Å | µ = 4.69 mm−1 |
α = 93.485 (4)° | T = 298 K |
β = 107.740 (5)° | Block, blue |
γ = 95.205 (4)° | 0.50 × 0.40 × 0.10 mm |
V = 894.5 (6) Å3 | |
Data collection top
Bruker SMART CCD area-detector diffractometer | 3076 independent reflections |
Radiation source: fine-focus sealed tube | 2745 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.026 |
φ and ω scans | θmax = 25.0°, θmin = 2.1° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2000) | h = −10→11 |
Tmin = 0.119, Tmax = 0.625 | k = −11→11 |
3664 measured reflections | l = −12→6 |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.047 | H-atom parameters constrained |
wR(F2) = 0.131 | w = 1/[σ2(Fo2) + (0.0585P)2 + 4.6211P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max < 0.001 |
3076 reflections | Δρmax = 1.46 e Å−3 |
218 parameters | Δρmin = −0.99 e Å−3 |
0 restraints | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0058 (9) |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
C1 | 0.2604 (8) | −0.1936 (7) | 0.0301 (7) | 0.0422 (16) | |
H1 | 0.2075 | −0.2008 | 0.0920 | 0.051* | |
C2 | 0.3350 (8) | −0.3041 (7) | 0.0058 (8) | 0.0429 (16) | |
H2 | 0.3325 | −0.3844 | 0.0508 | 0.051* | |
C3 | 0.4131 (8) | −0.2936 (7) | −0.0858 (8) | 0.0452 (17) | |
H3 | 0.4635 | −0.3672 | −0.1040 | 0.054* | |
C4 | 0.4160 (8) | −0.1729 (8) | −0.1508 (8) | 0.0435 (16) | |
H4 | 0.4693 | −0.1639 | −0.2123 | 0.052* | |
C5 | 0.3383 (6) | −0.0651 (6) | −0.1229 (6) | 0.0318 (13) | |
C6 | 0.3319 (7) | 0.0683 (7) | −0.1856 (6) | 0.0343 (14) | |
C7 | 0.4028 (8) | 0.1029 (8) | −0.2802 (7) | 0.0431 (16) | |
H7 | 0.4592 | 0.0403 | −0.3083 | 0.052* | |
C8 | 0.3885 (10) | 0.2317 (9) | −0.3324 (8) | 0.056 (2) | |
H8 | 0.4363 | 0.2568 | −0.3950 | 0.067* | |
C9 | 0.3031 (9) | 0.3221 (8) | −0.2909 (8) | 0.0495 (18) | |
H9 | 0.2910 | 0.4084 | −0.3258 | 0.059* | |
C10 | 0.2354 (8) | 0.2820 (7) | −0.1962 (7) | 0.0442 (16) | |
H10 | 0.1781 | 0.3431 | −0.1673 | 0.053* | |
C11 | 0.1762 (7) | 0.0379 (7) | 0.2564 (7) | 0.0366 (14) | |
C12 | 0.1623 (9) | 0.3627 (7) | 0.1112 (7) | 0.0450 (17) | |
C13 | 0.0788 (12) | 0.4608 (9) | 0.1710 (9) | 0.063 (2) | |
H13B | −0.0102 | 0.4794 | 0.1009 | 0.076* | |
H13A | 0.1415 | 0.5491 | 0.2045 | 0.076* | |
C14 | 0.1150 (8) | −0.0026 (8) | 0.3695 (7) | 0.0443 (16) | |
H14A | 0.0066 | −0.0175 | 0.3361 | 0.053* | |
H14B | 0.1449 | 0.0718 | 0.4428 | 0.053* | |
Cu1 | 0.16059 (8) | 0.09108 (8) | −0.00409 (8) | 0.0331 (2) | |
I1 | 0.01618 (7) | 0.37525 (6) | 0.33228 (5) | 0.0583 (2) | |
I2 | 0.20248 (9) | −0.19151 (6) | 0.44062 (6) | 0.0730 (3) | |
N1 | 0.2495 (6) | 0.1577 (6) | −0.1446 (5) | 0.0350 (12) | |
N2 | 0.2617 (6) | −0.0763 (5) | −0.0326 (5) | 0.0346 (12) | |
O1 | 0.0843 (5) | 0.0122 (5) | 0.1361 (4) | 0.0381 (10) | |
O2 | 0.0810 (6) | 0.2637 (5) | 0.0287 (5) | 0.0447 (11) | |
O3 | 0.3042 (6) | 0.0930 (6) | 0.2836 (6) | 0.0570 (14) | |
O4 | 0.2989 (7) | 0.3843 (7) | 0.1421 (7) | 0.0676 (16) | |
O5W | 0.5107 (14) | 0.3883 (11) | 0.4079 (10) | 0.056 (3) | 0.50 |
H51 | 0.4937 | 0.4324 | 0.3415 | 0.067* | 0.50 |
H52 | 0.5156 | 0.3105 | 0.3958 | 0.067* | 0.50 |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.041 (4) | 0.043 (4) | 0.042 (4) | 0.001 (3) | 0.013 (3) | 0.008 (3) |
C2 | 0.038 (4) | 0.034 (3) | 0.054 (4) | 0.008 (3) | 0.010 (3) | 0.006 (3) |
C3 | 0.037 (4) | 0.040 (4) | 0.057 (5) | 0.012 (3) | 0.011 (3) | 0.001 (3) |
C4 | 0.035 (4) | 0.050 (4) | 0.047 (4) | 0.007 (3) | 0.016 (3) | −0.003 (3) |
C5 | 0.025 (3) | 0.036 (3) | 0.033 (3) | 0.003 (2) | 0.009 (3) | 0.001 (3) |
C6 | 0.032 (3) | 0.040 (3) | 0.027 (3) | −0.001 (3) | 0.006 (3) | −0.003 (3) |
C7 | 0.046 (4) | 0.046 (4) | 0.040 (4) | 0.005 (3) | 0.019 (3) | 0.002 (3) |
C8 | 0.064 (5) | 0.068 (5) | 0.040 (4) | −0.001 (4) | 0.022 (4) | 0.012 (4) |
C9 | 0.061 (5) | 0.047 (4) | 0.046 (4) | 0.008 (3) | 0.021 (4) | 0.014 (3) |
C10 | 0.051 (4) | 0.041 (4) | 0.045 (4) | 0.011 (3) | 0.018 (3) | 0.012 (3) |
C11 | 0.038 (4) | 0.036 (3) | 0.037 (4) | 0.011 (3) | 0.012 (3) | 0.005 (3) |
C12 | 0.065 (5) | 0.035 (3) | 0.044 (4) | 0.012 (3) | 0.028 (4) | 0.011 (3) |
C13 | 0.104 (7) | 0.046 (4) | 0.063 (5) | 0.021 (4) | 0.056 (5) | 0.009 (4) |
C14 | 0.048 (4) | 0.054 (4) | 0.036 (4) | 0.010 (3) | 0.019 (3) | 0.009 (3) |
Cu1 | 0.0372 (4) | 0.0349 (4) | 0.0317 (4) | 0.0091 (3) | 0.0156 (3) | 0.0051 (3) |
I1 | 0.0787 (4) | 0.0642 (4) | 0.0453 (3) | 0.0242 (3) | 0.0331 (3) | 0.0117 (2) |
I2 | 0.1289 (6) | 0.0463 (3) | 0.0491 (4) | 0.0124 (3) | 0.0328 (4) | 0.0159 (2) |
N1 | 0.035 (3) | 0.040 (3) | 0.030 (3) | 0.007 (2) | 0.011 (2) | 0.004 (2) |
N2 | 0.034 (3) | 0.036 (3) | 0.033 (3) | 0.005 (2) | 0.010 (2) | 0.004 (2) |
O1 | 0.043 (3) | 0.047 (3) | 0.027 (2) | 0.010 (2) | 0.0128 (19) | 0.0059 (19) |
O2 | 0.052 (3) | 0.040 (3) | 0.046 (3) | 0.014 (2) | 0.018 (2) | −0.001 (2) |
O3 | 0.043 (3) | 0.074 (4) | 0.051 (3) | −0.006 (3) | 0.012 (2) | 0.010 (3) |
O4 | 0.057 (4) | 0.069 (4) | 0.074 (4) | −0.006 (3) | 0.023 (3) | −0.007 (3) |
O5W | 0.104 (9) | 0.050 (6) | 0.036 (5) | 0.051 (6) | 0.038 (6) | 0.018 (4) |
Geometric parameters (Å, º) top
C1—N2 | 1.339 (9) | C11—O3 | 1.217 (8) |
C1—C2 | 1.380 (10) | C11—O1 | 1.282 (8) |
C1—H1 | 0.9300 | C11—C14 | 1.516 (9) |
C2—C3 | 1.376 (11) | C12—O4 | 1.226 (10) |
C2—H2 | 0.9300 | C12—O2 | 1.266 (9) |
C3—C4 | 1.383 (11) | C12—C13 | 1.505 (11) |
C3—H3 | 0.9300 | C13—I1 | 2.130 (8) |
C4—C5 | 1.390 (9) | C13—H13B | 0.9700 |
C4—H4 | 0.9300 | C13—H13A | 0.9700 |
C5—N2 | 1.354 (8) | C14—I2 | 2.146 (7) |
C5—C6 | 1.474 (9) | C14—H14A | 0.9700 |
C6—N1 | 1.345 (9) | C14—H14B | 0.9700 |
C6—C7 | 1.389 (9) | Cu1—O2 | 1.939 (5) |
C7—C8 | 1.385 (11) | Cu1—O1 | 1.976 (4) |
C7—H7 | 0.9300 | Cu1—N2 | 1.998 (5) |
C8—C9 | 1.374 (12) | Cu1—N1 | 2.006 (5) |
C8—H8 | 0.9300 | Cu1—O1i | 2.390 (5) |
C9—C10 | 1.385 (10) | O1—Cu1i | 2.390 (5) |
C9—H9 | 0.9300 | O5W—H51 | 0.8150 |
C10—N1 | 1.342 (9) | O5W—H52 | 0.7604 |
C10—H10 | 0.9300 | | |
| | | |
N2—C1—C2 | 122.2 (7) | O2—C12—C13 | 115.1 (7) |
N2—C1—H1 | 118.9 | C12—C13—I1 | 111.5 (5) |
C2—C1—H1 | 118.9 | C12—C13—H13B | 109.3 |
C3—C2—C1 | 119.0 (7) | I1—C13—H13B | 109.3 |
C3—C2—H2 | 120.5 | C12—C13—H13A | 109.3 |
C1—C2—H2 | 120.5 | I1—C13—H13A | 109.3 |
C2—C3—C4 | 119.5 (7) | H13B—C13—H13A | 108.0 |
C2—C3—H3 | 120.2 | C11—C14—I2 | 108.2 (5) |
C4—C3—H3 | 120.2 | C11—C14—H14A | 110.1 |
C3—C4—C5 | 119.0 (7) | I2—C14—H14A | 110.1 |
C3—C4—H4 | 120.5 | C11—C14—H14B | 110.1 |
C5—C4—H4 | 120.5 | I2—C14—H14B | 110.1 |
N2—C5—C4 | 121.1 (6) | H14A—C14—H14B | 108.4 |
N2—C5—C6 | 114.5 (5) | O2—Cu1—O1 | 88.3 (2) |
C4—C5—C6 | 124.4 (6) | O2—Cu1—N2 | 174.6 (2) |
N1—C6—C7 | 121.0 (6) | O1—Cu1—N2 | 94.3 (2) |
N1—C6—C5 | 114.6 (5) | O2—Cu1—N1 | 96.4 (2) |
C7—C6—C5 | 124.5 (6) | O1—Cu1—N1 | 175.0 (2) |
C8—C7—C6 | 119.3 (7) | N2—Cu1—N1 | 80.8 (2) |
C8—C7—H7 | 120.4 | O2—Cu1—O1i | 90.21 (19) |
C6—C7—H7 | 120.4 | O1—Cu1—O1i | 78.46 (18) |
C9—C8—C7 | 119.5 (7) | N2—Cu1—O1i | 94.95 (19) |
C9—C8—H8 | 120.3 | N1—Cu1—O1i | 102.97 (19) |
C7—C8—H8 | 120.3 | C10—N1—C6 | 119.4 (6) |
C8—C9—C10 | 118.6 (7) | C10—N1—Cu1 | 125.5 (5) |
C8—C9—H9 | 120.7 | C6—N1—Cu1 | 115.1 (4) |
C10—C9—H9 | 120.7 | C1—N2—C5 | 119.2 (6) |
N1—C10—C9 | 122.2 (7) | C1—N2—Cu1 | 125.8 (5) |
N1—C10—H10 | 118.9 | C5—N2—Cu1 | 115.0 (4) |
C9—C10—H10 | 118.9 | C11—O1—Cu1 | 113.6 (4) |
O3—C11—O1 | 124.6 (6) | C11—O1—Cu1i | 144.8 (4) |
O3—C11—C14 | 119.8 (6) | Cu1—O1—Cu1i | 101.54 (18) |
O1—C11—C14 | 115.6 (6) | C12—O2—Cu1 | 120.9 (5) |
O4—C12—O2 | 125.3 (7) | H51—O5W—H52 | 116.5 |
O4—C12—C13 | 119.6 (8) | | |
Symmetry code: (i) −x, −y, −z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4···O3ii | 0.93 | 2.52 | 3.387 (9) | 155 |
C3—H3···O4ii | 0.93 | 2.41 | 3.139 (10) | 135 |
C2—H2···O4iii | 0.93 | 2.51 | 3.430 (10) | 172 |
O5W—H52···O3 | 0.76 | 2.69 | 3.252 (13) | 132 |
O5W—H51···O4 | 0.82 | 2.30 | 2.874 (12) | 127 |
Symmetry codes: (ii) −x+1, −y, −z; (iii) x, y−1, z. |