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The title compound, C24H29NO2, is one of the inter­mediates of the potent HIV protease inhibitor Indinavir. The oxazolidine ring adopts an envelope conformation. The orientation of the benzyl groups facilitates C—H...π inter­actions, forming mol­ecular chains along the a axis.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536806039389/rz2071sup1.cif
Contains datablocks I, global

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S1600536806039389/rz2071Isup2.hkl
Contains datablock I

CCDC reference: 624970

Key indicators

  • Single-crystal X-ray study
  • T = 273 K
  • Mean [sigma](C-C) = 0.004 Å
  • Disorder in main residue
  • R factor = 0.038
  • wR factor = 0.101
  • Data-to-parameter ratio = 7.8

checkCIF/PLATON results

No syntax errors found



Alert level B PLAT029_ALERT_3_B _diffrn_measured_fraction_theta_full Low ....... 0.96
Alert level C PLAT089_ALERT_3_C Poor Data / Parameter Ratio (Zmax .LT. 18) ..... 7.81 PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 2.94 Ratio PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for C9 PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for C18 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C5 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C14 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C23 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C23A PLAT301_ALERT_3_C Main Residue Disorder ......................... 7.00 Perc.
Alert level G REFLT03_ALERT_1_G ALERT: Expected hkl max differ from CIF values From the CIF: _diffrn_reflns_theta_max 25.00 From the CIF: _reflns_number_total 2069 From the CIF: _diffrn_reflns_limit_ max hkl 11. 13. 20. From the CIF: _diffrn_reflns_limit_ min hkl -11. -13. -19. TEST1: Expected hkl limits for theta max Calculated maximum hkl 11. 13. 22. Calculated minimum hkl -11. -13. -22. REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 25.00 From the CIF: _reflns_number_total 2069 Count of symmetry unique reflns 2159 Completeness (_total/calc) 95.83% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 0 Fraction of Friedel pairs measured 0.000 Are heavy atom types Z>Si present no PLAT791_ALERT_1_G Confirm the Absolute Configuration of C3 = . R PLAT791_ALERT_1_G Confirm the Absolute Configuration of C12 = . S
0 ALERT level A = In general: serious problem 1 ALERT level B = Potentially serious problem 9 ALERT level C = Check and explain 4 ALERT level G = General alerts; check 3 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 7 ALERT type 2 Indicator that the structure model may be wrong or deficient 3 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check

Computing details top

Data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL/PC (Sheldrick, 1990) and PLATON (Spek, 2003); software used to prepare material for publication: SHELXL97.

(2S)-2-Benzyl-1-[(4R)-4-benzyl-2,2-dimethyl-1,3-oxazolan-3-yl]pent-4-en-1-one top
Crystal data top
C24H29NO2F(000) = 784
Mr = 363.48Dx = 1.126 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 3930 reflections
a = 10.0061 (12) Åθ = 2.3–21.2°
b = 11.5146 (14) ŵ = 0.07 mm1
c = 18.602 (2) ÅT = 273 K
V = 2143.3 (4) Å3Block, colourless
Z = 40.19 × 0.13 × 0.09 mm
Data collection top
Bruker SMART APEX CCD area-detector
diffractometer
1832 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.025
Graphite monochromatorθmax = 25.0°, θmin = 2.1°
ω scansh = 1111
10985 measured reflectionsk = 1313
2069 independent reflectionsl = 1920
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.038H-atom parameters constrained
wR(F2) = 0.101 w = 1/[σ2(Fo2) + (0.0558P)2 + 0.202P]
where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
2069 reflectionsΔρmax = 0.11 e Å3
265 parametersΔρmin = 0.18 e Å3
4 restraintsAbsolute structure: Flack (1983), 1532 Friedels pairs
Primary atom site location: structure-invariant direct methods
Special details top

Experimental. 1H NMR (CDCl3): δ 1.55 (s, 3H), 1.65 (s, 3H), 1.89 (d, 1H, J = 12.8 Hz), 2.20–2.60 (m, 3H), 2.75 (dd, 1H, J = 4.5, 12.8 Hz), 2.85 (m, 1H), 3.20 (dd, 1H, J = 9.8, 12.8 Hz), 3.61–3.75 (m, 1H), 3.85 (m, 1H), 5.14 (dd, 2H, J = 8.6, 128 Hz), 5.80 (m, 1H), 7.01 (d, 2H, J = 6.8 Hz), 7.11–7.32 (m, 8H).

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/UeqOcc. (<1)
O10.53561 (18)0.73286 (14)0.79416 (9)0.0686 (5)
O20.70312 (18)0.80858 (14)0.99131 (9)0.0685 (5)
N10.61033 (17)0.84793 (14)0.88289 (10)0.0482 (4)
C10.6490 (2)0.75085 (19)0.93062 (13)0.0586 (6)
C20.6435 (3)0.9197 (2)0.99535 (13)0.0654 (7)
H2A0.69650.97201.02470.079*
H2B0.55390.91511.01510.079*
C30.6408 (2)0.95905 (18)0.91781 (12)0.0497 (5)
H30.56841.01500.90990.060*
C40.7741 (2)1.0089 (2)0.89280 (15)0.0562 (6)
H4A0.84560.95810.90850.067*
H4B0.77541.01110.84070.067*
C50.7989 (2)1.12866 (19)0.92122 (13)0.0546 (6)
C60.7340 (2)1.22289 (19)0.89251 (15)0.0626 (6)
H60.67681.21210.85360.075*
C70.7513 (3)1.3327 (2)0.91975 (17)0.0767 (8)
H70.70471.39490.90000.092*
C80.8366 (4)1.3506 (2)0.97577 (18)0.0910 (10)
H80.84941.42490.99410.109*
C90.9025 (4)1.2591 (3)1.0044 (2)0.1195 (14)
H90.96011.27051.04300.143*
C100.8851 (4)1.1494 (2)0.9770 (2)0.0986 (11)
H100.93301.08790.99660.118*
C110.5534 (2)0.83061 (18)0.81805 (13)0.0520 (5)
C120.5063 (2)0.9344 (2)0.77493 (13)0.0573 (6)
H120.53791.00600.79790.069*
C130.5603 (3)0.9283 (3)0.69837 (14)0.0676 (7)
H13A0.53990.85250.67840.081*
H13B0.51510.98610.66920.081*
C140.7080 (3)0.9483 (2)0.69401 (14)0.0626 (6)
C150.7591 (3)1.0588 (3)0.69392 (15)0.0723 (7)
H150.70051.12150.69460.087*
C160.8934 (4)1.0795 (4)0.69289 (19)0.0982 (11)
H160.92591.15510.69250.118*
C170.9789 (4)0.9873 (5)0.6924 (2)0.1218 (15)
H171.07061.00040.69290.146*
C180.9319 (4)0.8770 (5)0.6912 (3)0.1350 (17)
H180.99100.81470.68960.162*
C190.7955 (4)0.8576 (3)0.6924 (2)0.1001 (10)
H190.76320.78190.69210.120*
C200.7597 (3)0.6792 (2)0.89876 (18)0.0832 (9)
H20A0.79150.62480.93400.125*
H20B0.83160.72920.88430.125*
H20C0.72660.63780.85770.125*
C210.5285 (3)0.6798 (2)0.95281 (17)0.0855 (9)
H21A0.46340.72960.97480.128*
H21B0.55550.62110.98650.128*
H21C0.49010.64350.91120.128*
C220.3524 (3)0.9341 (3)0.77338 (15)0.0768 (8)
H22A0.32321.00430.74920.092*
H22B0.32370.86900.74410.092*
C230.2799 (8)0.9268 (8)0.8450 (4)0.078 (3)0.578 (14)
H230.29690.86330.87450.093*0.578 (14)
C240.1974 (10)1.0030 (10)0.8666 (6)0.120 (4)0.578 (14)
H24A0.17871.06730.83810.144*0.578 (14)
H24B0.15560.99450.91100.144*0.578 (14)
C23A0.2993 (10)0.9857 (12)0.8426 (5)0.085 (4)0.422 (14)
H23A0.32081.06000.85830.102*0.422 (14)
C24A0.223 (2)0.9184 (14)0.8768 (8)0.146 (7)0.422 (14)
H24C0.20480.84470.85890.175*0.422 (14)
H24D0.18570.94240.92010.175*0.422 (14)
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O10.0831 (12)0.0529 (9)0.0699 (11)0.0158 (9)0.0081 (9)0.0130 (8)
O20.0807 (11)0.0639 (10)0.0609 (11)0.0000 (9)0.0163 (9)0.0069 (8)
N10.0515 (10)0.0421 (9)0.0509 (11)0.0014 (8)0.0021 (8)0.0023 (8)
C10.0644 (13)0.0494 (12)0.0620 (15)0.0009 (11)0.0053 (13)0.0046 (11)
C20.0751 (15)0.0658 (15)0.0555 (16)0.0013 (14)0.0032 (13)0.0048 (12)
C30.0526 (12)0.0473 (11)0.0491 (14)0.0037 (10)0.0041 (10)0.0069 (10)
C40.0550 (14)0.0534 (12)0.0601 (16)0.0000 (10)0.0035 (11)0.0084 (11)
C50.0548 (12)0.0519 (12)0.0570 (14)0.0051 (10)0.0080 (12)0.0022 (10)
C60.0686 (15)0.0551 (12)0.0642 (16)0.0087 (11)0.0159 (13)0.0036 (12)
C70.0873 (18)0.0526 (13)0.090 (2)0.0048 (13)0.0182 (17)0.0082 (13)
C80.120 (3)0.0523 (15)0.100 (2)0.0141 (16)0.026 (2)0.0071 (16)
C90.157 (3)0.0738 (18)0.127 (3)0.012 (2)0.088 (3)0.0119 (18)
C100.114 (2)0.0596 (16)0.122 (3)0.0034 (16)0.066 (2)0.0003 (17)
C110.0484 (11)0.0545 (13)0.0531 (14)0.0071 (10)0.0003 (10)0.0056 (11)
C120.0567 (13)0.0606 (13)0.0548 (15)0.0030 (11)0.0104 (11)0.0028 (11)
C130.0749 (17)0.0763 (16)0.0515 (16)0.0054 (14)0.0096 (12)0.0007 (13)
C140.0668 (15)0.0740 (16)0.0470 (15)0.0021 (13)0.0009 (11)0.0023 (12)
C150.0745 (18)0.0820 (17)0.0604 (18)0.0042 (15)0.0009 (13)0.0048 (14)
C160.083 (2)0.130 (3)0.081 (2)0.030 (2)0.0013 (17)0.016 (2)
C170.064 (2)0.180 (4)0.122 (3)0.008 (3)0.011 (2)0.038 (3)
C180.092 (3)0.152 (4)0.161 (4)0.038 (3)0.036 (3)0.044 (4)
C190.098 (2)0.089 (2)0.114 (3)0.0113 (19)0.027 (2)0.011 (2)
C200.0876 (19)0.0590 (14)0.103 (2)0.0194 (14)0.0152 (18)0.0024 (15)
C210.0934 (19)0.0775 (18)0.086 (2)0.0248 (16)0.0024 (17)0.0197 (16)
C220.0588 (14)0.105 (2)0.0667 (17)0.0108 (16)0.0122 (13)0.0055 (16)
C230.058 (4)0.101 (6)0.073 (5)0.012 (4)0.003 (3)0.010 (4)
C240.104 (6)0.147 (8)0.107 (6)0.024 (6)0.026 (4)0.005 (6)
C23A0.049 (5)0.099 (8)0.108 (7)0.004 (6)0.008 (4)0.014 (7)
C24A0.145 (13)0.178 (15)0.114 (10)0.017 (13)0.056 (9)0.029 (10)
Geometric parameters (Å, º) top
O1—C111.223 (3)C13—H13A0.9700
O2—C21.414 (3)C13—H13B0.9700
O2—C11.418 (3)C14—C191.364 (4)
N1—C111.349 (3)C14—C151.370 (4)
N1—C31.467 (3)C15—C161.365 (4)
N1—C11.479 (3)C15—H150.9300
C1—C201.503 (4)C16—C171.363 (6)
C1—C211.515 (4)C16—H160.9300
C2—C31.512 (3)C17—C181.355 (6)
C2—H2A0.9700C17—H170.9300
C2—H2B0.9700C18—C191.383 (6)
C3—C41.525 (3)C18—H180.9300
C3—H30.9800C19—H190.9300
C4—C51.498 (3)C20—H20A0.9600
C4—H4A0.9700C20—H20B0.9600
C4—H4B0.9700C20—H20C0.9600
C5—C101.370 (4)C21—H21A0.9600
C5—C61.373 (3)C21—H21B0.9600
C6—C71.373 (3)C21—H21C0.9600
C6—H60.9300C22—C23A1.513 (8)
C7—C81.363 (4)C22—C231.519 (7)
C7—H70.9300C22—H22A0.9700
C8—C91.353 (5)C22—H22B0.9700
C8—H80.9300C23—C241.270 (8)
C9—C101.373 (4)C23—H230.9300
C9—H90.9300C24—H24A0.9300
C10—H100.9300C24—H24B0.9300
C11—C121.515 (3)C23A—C24A1.259 (10)
C12—C131.525 (4)C23A—H23A0.9300
C12—C221.540 (3)C24A—H24C0.9300
C12—H120.9800C24A—H24D0.9300
C13—C141.498 (4)
C2—O2—C1107.79 (18)C14—C13—H13A109.0
C11—N1—C3127.79 (17)C12—C13—H13A109.0
C11—N1—C1122.39 (17)C14—C13—H13B109.0
C3—N1—C1109.81 (16)C12—C13—H13B109.0
O2—C1—N1102.92 (16)H13A—C13—H13B107.8
O2—C1—C20106.9 (2)C19—C14—C15118.1 (3)
N1—C1—C20111.8 (2)C19—C14—C13121.1 (3)
O2—C1—C21109.9 (2)C15—C14—C13120.7 (3)
N1—C1—C21111.3 (2)C16—C15—C14122.0 (3)
C20—C1—C21113.4 (2)C16—C15—H15119.0
O2—C2—C3103.17 (19)C14—C15—H15119.0
O2—C2—H2A111.1C17—C16—C15118.8 (4)
C3—C2—H2A111.1C17—C16—H16120.6
O2—C2—H2B111.1C15—C16—H16120.6
C3—C2—H2B111.1C18—C17—C16120.8 (4)
H2A—C2—H2B109.1C18—C17—H17119.6
N1—C3—C299.49 (17)C16—C17—H17119.6
N1—C3—C4112.01 (18)C17—C18—C19119.5 (4)
C2—C3—C4112.9 (2)C17—C18—H18120.2
N1—C3—H3110.7C19—C18—H18120.2
C2—C3—H3110.7C14—C19—C18120.7 (4)
C4—C3—H3110.7C14—C19—H19119.6
C5—C4—C3112.6 (2)C18—C19—H19119.6
C5—C4—H4A109.1C1—C20—H20A109.5
C3—C4—H4A109.1C1—C20—H20B109.5
C5—C4—H4B109.1H20A—C20—H20B109.5
C3—C4—H4B109.1C1—C20—H20C109.5
H4A—C4—H4B107.8H20A—C20—H20C109.5
C10—C5—C6117.0 (2)H20B—C20—H20C109.5
C10—C5—C4122.2 (2)C1—C21—H21A109.5
C6—C5—C4120.8 (2)C1—C21—H21B109.5
C5—C6—C7121.6 (2)H21A—C21—H21B109.5
C5—C6—H6119.2C1—C21—H21C109.5
C7—C6—H6119.2H21A—C21—H21C109.5
C8—C7—C6120.0 (3)H21B—C21—H21C109.5
C8—C7—H7120.0C23A—C22—C12109.5 (5)
C6—C7—H7120.0C23—C22—C12117.5 (4)
C9—C8—C7119.2 (3)C23A—C22—H22A87.8
C9—C8—H8120.4C23—C22—H22A107.9
C7—C8—H8120.4C12—C22—H22A107.9
C8—C9—C10120.6 (3)C23A—C22—H22B132.6
C8—C9—H9119.7C23—C22—H22B107.9
C10—C9—H9119.7C12—C22—H22B107.9
C5—C10—C9121.4 (3)H22A—C22—H22B107.2
C5—C10—H10119.3C24—C23—C22123.4 (11)
C9—C10—H10119.3C24—C23—H23118.3
O1—C11—N1121.5 (2)C22—C23—H23118.3
O1—C11—C12119.3 (2)C23—C24—H24A120.0
N1—C11—C12119.22 (18)C23—C24—H24B120.0
C11—C12—C13110.4 (2)H24A—C24—H24B120.0
C11—C12—C22108.6 (2)C24A—C23A—C22113.7 (15)
C13—C12—C22109.7 (2)C24A—C23A—H23A123.2
C11—C12—H12109.4C22—C23A—H23A123.2
C13—C12—H12109.4C23A—C24A—H24C120.0
C22—C12—H12109.4C23A—C24A—H24D120.0
C14—C13—C12113.1 (2)H24C—C24A—H24D120.0
C2—O2—C1—N126.5 (2)C3—N1—C11—O1178.5 (2)
C2—O2—C1—C20144.3 (2)C1—N1—C11—O12.9 (3)
C2—O2—C1—C2192.2 (2)C3—N1—C11—C123.5 (3)
C11—N1—C1—O2179.85 (18)C1—N1—C11—C12175.0 (2)
C3—N1—C1—O21.1 (2)O1—C11—C12—C1352.3 (3)
C11—N1—C1—C2065.8 (3)N1—C11—C12—C13129.7 (2)
C3—N1—C1—C20115.4 (2)O1—C11—C12—C2268.0 (3)
C11—N1—C1—C2162.2 (3)N1—C11—C12—C22110.1 (2)
C3—N1—C1—C21116.6 (2)C11—C12—C13—C1470.1 (3)
C1—O2—C2—C341.4 (2)C22—C12—C13—C14170.3 (2)
C11—N1—C3—C2156.6 (2)C12—C13—C14—C1995.8 (3)
C1—N1—C3—C222.1 (2)C12—C13—C14—C1582.0 (3)
C11—N1—C3—C483.9 (3)C19—C14—C15—C160.6 (5)
C1—N1—C3—C497.4 (2)C13—C14—C15—C16177.3 (3)
O2—C2—C3—N137.4 (2)C14—C15—C16—C170.4 (6)
O2—C2—C3—C481.5 (2)C15—C16—C17—C181.6 (7)
N1—C3—C4—C5173.19 (19)C16—C17—C18—C191.7 (8)
C2—C3—C4—C575.5 (2)C15—C14—C19—C180.4 (6)
C3—C4—C5—C10103.4 (3)C13—C14—C19—C18177.4 (4)
C3—C4—C5—C675.8 (3)C17—C18—C19—C140.7 (8)
C10—C5—C6—C72.0 (4)C11—C12—C22—C23A81.1 (6)
C4—C5—C6—C7177.3 (3)C13—C12—C22—C23A158.2 (6)
C5—C6—C7—C81.3 (5)C11—C12—C22—C2353.0 (5)
C6—C7—C8—C90.6 (5)C13—C12—C22—C23173.6 (5)
C7—C8—C9—C100.8 (7)C23A—C22—C23—C2442.7 (13)
C6—C5—C10—C92.1 (5)C12—C22—C23—C24121.6 (10)
C4—C5—C10—C9177.2 (4)C23—C22—C23A—C24A9.9 (13)
C8—C9—C10—C51.5 (7)C12—C22—C23A—C24A122.4 (14)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C13—H13A···O10.972.562.881 (4)100
C20—H20C···O10.962.503.032 (4)115
C21—H21C···O10.962.453.015 (4)117
C4—H4B···Cg10.972.883.815 (2)163
C2—H2A···Cg1i0.973.233.896 (2)128
Symmetry code: (i) x+3/2, y+2, z+1/2.
 

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