The title compound, C
13H
8Cl
2N
2, was prepared by reaction of ο-phenylenediamine with 2,4-dichlorobenzaldehyde under reflux in ethanol. The dihedral angle between the benzimidazole system and the benzene ring is 42.00 (15)°. In the crystal structure, intermolecular N—H
N interactions are present.
Supporting information
CCDC reference: 614289
Key indicators
- Single-crystal X-ray study
- T = 295 K
- Mean (C-C) = 0.005 Å
- R factor = 0.050
- wR factor = 0.156
- Data-to-parameter ratio = 16.8
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT030_ALERT_1_C _diffrn_reflns_number .LE. _reflns_number_total ?
PLAT031_ALERT_4_C Refined Extinction Parameter within Range ...... 2.57 Sigma
PLAT340_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 5
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
3 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
0 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
1 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
Data collection: CAD-4 Software (Enraf–Nonius, 1989); cell refinement: CAD-4 Software; data reduction: NRCVAX (Gabe et al., 1989); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL/PC (Sheldrick, 1990); software used to prepare material for publication: WinGX (Farrugia, 1999).
2-(2,4-Dichlorophenyl)-1
H-benzimidazole
top
Crystal data top
C13H8Cl2N2 | F(000) = 1072 |
Mr = 263.11 | Dx = 1.435 Mg m−3 |
Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2ab | Cell parameters from 25 reflections |
a = 8.5630 (17) Å | θ = 4–14° |
b = 9.910 (2) Å | µ = 0.51 mm−1 |
c = 28.694 (6) Å | T = 295 K |
V = 2435.0 (9) Å3 | Block, yellow |
Z = 8 | 0.30 × 0.20 × 0.15 mm |
Data collection top
Bruker P4 diffractometer | Rint = 0.000 |
Radiation source: fine-focus sealed tube | θmax = 27.0°, θmin = 1.4° |
Graphite monochromator | h = −10→10 |
ω scans | k = −12→12 |
2602 measured reflections | l = −36→36 |
2602 independent reflections | 3 standard reflections every 100 reflections |
1316 reflections with I > 2σ(I) | intensity decay: none |
Refinement top
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.050 | H-atom parameters constrained |
wR(F2) = 0.156 | w = 1/[σ2(Fo2) + (0.0711P)2 + 0.589P] where P = (Fo2 + 2Fc2)/3 |
S = 1.01 | (Δ/σ)max < 0.001 |
2602 reflections | Δρmax = 0.28 e Å−3 |
155 parameters | Δρmin = −0.35 e Å−3 |
0 restraints | Extinction correction: SHELXL97, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0018 (7) |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Cl1 | 0.21343 (11) | 0.07444 (12) | 0.05040 (3) | 0.0723 (4) | |
Cl2 | −0.39874 (13) | 0.18750 (17) | 0.04715 (5) | 0.1087 (6) | |
N1 | 0.3227 (3) | 0.1713 (2) | 0.14976 (9) | 0.0389 (6) | |
H1A | 0.3131 | 0.0871 | 0.1430 | 0.047* | |
N2 | 0.2710 (3) | 0.3937 (2) | 0.15192 (9) | 0.0406 (6) | |
C1 | 0.5670 (4) | 0.1752 (3) | 0.19938 (11) | 0.0468 (8) | |
H1B | 0.5886 | 0.0833 | 0.1986 | 0.056* | |
C2 | 0.6596 (4) | 0.2634 (3) | 0.22402 (12) | 0.0531 (9) | |
H2B | 0.7449 | 0.2302 | 0.2405 | 0.064* | |
C3 | 0.6279 (4) | 0.4038 (3) | 0.22489 (12) | 0.0508 (9) | |
H3A | 0.6932 | 0.4608 | 0.2418 | 0.061* | |
C4 | 0.5033 (4) | 0.4571 (3) | 0.20141 (11) | 0.0459 (8) | |
H4A | 0.4835 | 0.5494 | 0.2020 | 0.055* | |
C5 | 0.4061 (3) | 0.3692 (3) | 0.17650 (11) | 0.0354 (7) | |
C6 | 0.4401 (3) | 0.2289 (3) | 0.17576 (10) | 0.0361 (7) | |
C7 | 0.2248 (3) | 0.2727 (3) | 0.13667 (10) | 0.0357 (7) | |
C8 | 0.0770 (4) | 0.2514 (3) | 0.11164 (11) | 0.0416 (8) | |
C9 | −0.0532 (4) | 0.3232 (3) | 0.12684 (14) | 0.0587 (10) | |
H9A | −0.0417 | 0.3841 | 0.1513 | 0.070* | |
C10 | −0.1982 (4) | 0.3072 (4) | 0.10696 (16) | 0.0688 (12) | |
H10A | −0.2835 | 0.3564 | 0.1176 | 0.083* | |
C11 | −0.2139 (4) | 0.2165 (5) | 0.07099 (14) | 0.0661 (11) | |
C12 | −0.0891 (4) | 0.1436 (4) | 0.05448 (13) | 0.0642 (11) | |
H12A | −0.1023 | 0.0825 | 0.0302 | 0.077* | |
C13 | 0.0560 (4) | 0.1620 (3) | 0.07434 (12) | 0.0497 (9) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cl1 | 0.0582 (6) | 0.0942 (8) | 0.0646 (6) | 0.0107 (6) | −0.0073 (5) | −0.0348 (6) |
Cl2 | 0.0455 (6) | 0.1759 (15) | 0.1047 (10) | −0.0213 (8) | −0.0216 (6) | 0.0118 (10) |
N1 | 0.0442 (15) | 0.0208 (12) | 0.0518 (16) | −0.0025 (11) | −0.0044 (12) | −0.0026 (12) |
N2 | 0.0420 (15) | 0.0249 (13) | 0.0549 (16) | −0.0001 (11) | −0.0030 (13) | −0.0054 (12) |
C1 | 0.054 (2) | 0.0302 (16) | 0.057 (2) | 0.0012 (16) | −0.0123 (17) | 0.0023 (15) |
C2 | 0.052 (2) | 0.048 (2) | 0.060 (2) | −0.0006 (17) | −0.0177 (18) | 0.0051 (17) |
C3 | 0.056 (2) | 0.041 (2) | 0.056 (2) | −0.0145 (17) | −0.0072 (18) | −0.0056 (16) |
C4 | 0.0504 (19) | 0.0283 (16) | 0.059 (2) | −0.0062 (15) | −0.0047 (17) | −0.0057 (15) |
C5 | 0.0409 (17) | 0.0237 (14) | 0.0414 (17) | −0.0007 (13) | 0.0010 (14) | 0.0004 (13) |
C6 | 0.0418 (17) | 0.0262 (15) | 0.0402 (17) | −0.0036 (13) | −0.0009 (14) | −0.0006 (13) |
C7 | 0.0388 (17) | 0.0252 (15) | 0.0431 (17) | −0.0004 (14) | 0.0017 (14) | −0.0018 (13) |
C8 | 0.0398 (18) | 0.0353 (17) | 0.0497 (19) | −0.0024 (15) | 0.0002 (15) | 0.0036 (15) |
C9 | 0.049 (2) | 0.049 (2) | 0.079 (3) | 0.0028 (18) | −0.003 (2) | −0.010 (2) |
C10 | 0.042 (2) | 0.080 (3) | 0.085 (3) | 0.009 (2) | 0.002 (2) | 0.001 (2) |
C11 | 0.040 (2) | 0.093 (3) | 0.065 (2) | −0.013 (2) | −0.0071 (18) | 0.015 (2) |
C12 | 0.051 (2) | 0.087 (3) | 0.054 (2) | −0.017 (2) | −0.0064 (19) | −0.016 (2) |
C13 | 0.049 (2) | 0.052 (2) | 0.048 (2) | −0.0017 (17) | 0.0011 (16) | −0.0015 (17) |
Geometric parameters (Å, º) top
Cl1—C13 | 1.744 (4) | C4—C5 | 1.401 (4) |
Cl2—C11 | 1.748 (4) | C4—H4A | 0.9300 |
N1—C7 | 1.362 (4) | C5—C6 | 1.421 (4) |
N1—C6 | 1.376 (4) | C7—C8 | 1.470 (4) |
N1—H1A | 0.8600 | C8—C9 | 1.392 (5) |
N2—C7 | 1.337 (4) | C8—C13 | 1.401 (5) |
N2—C5 | 1.376 (4) | C9—C10 | 1.376 (5) |
C1—C2 | 1.376 (4) | C9—H9A | 0.9300 |
C1—C6 | 1.387 (4) | C10—C11 | 1.375 (6) |
C1—H1B | 0.9300 | C10—H10A | 0.9300 |
C2—C3 | 1.418 (5) | C11—C12 | 1.375 (5) |
C2—H2B | 0.9300 | C12—C13 | 1.379 (5) |
C3—C4 | 1.369 (4) | C12—H12A | 0.9300 |
C3—H3A | 0.9300 | | |
| | | |
C7—N1—C6 | 107.1 (2) | C10—C11—Cl2 | 119.3 (3) |
C7—N2—C5 | 105.0 (2) | C11—C12—C13 | 119.3 (4) |
C2—C1—C6 | 117.4 (3) | C12—C13—C8 | 121.0 (3) |
C1—C2—C3 | 121.5 (3) | C12—C13—Cl1 | 117.9 (3) |
C4—C3—C2 | 121.3 (3) | C8—C13—Cl1 | 121.1 (3) |
C3—C4—C5 | 118.3 (3) | C6—N1—H1A | 126.47 |
N2—C5—C4 | 130.6 (3) | C7—N1—H1A | 126.47 |
N2—C5—C6 | 109.7 (2) | C2—C1—H1B | 121.33 |
C4—C5—C6 | 119.7 (3) | C6—C1—H1B | 121.32 |
N1—C6—C1 | 132.7 (3) | C1—C2—H2B | 119.26 |
N1—C6—C5 | 105.3 (3) | C3—C2—H2B | 119.26 |
C1—C6—C5 | 121.9 (3) | C2—C3—H3A | 119.35 |
N2—C7—N1 | 112.9 (3) | C4—C3—H3A | 119.35 |
N2—C7—C8 | 122.9 (3) | C3—C4—H4A | 120.84 |
N1—C7—C8 | 124.0 (3) | C5—C4—H4A | 120.84 |
C9—C8—C13 | 117.4 (3) | C8—C9—H9A | 118.87 |
C9—C8—C7 | 117.6 (3) | C10—C9—H9A | 118.87 |
C13—C8—C7 | 125.0 (3) | C9—C10—H10A | 120.82 |
C10—C9—C8 | 122.3 (4) | C11—C10—H10A | 120.82 |
C11—C10—C9 | 118.4 (4) | C11—C12—H12A | 120.37 |
C12—C11—C10 | 121.7 (3) | C13—C12—H12A | 120.37 |
C12—C11—Cl2 | 118.9 (3) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···N2i | 0.86 | 2.06 | 2.866 (2) | 155 |
N1—H1A···Cl1 | 0.86 | 2.79 | 3.150 (3) | 106 |
Symmetry code: (i) −x+1/2, y−1/2, z. |