Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807016212/sk3112sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807016212/sk3112Isup2.hkl |
CCDC reference: 646607
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean (C-C) = 0.005 Å
- R factor = 0.042
- wR factor = 0.096
- Data-to-parameter ratio = 16.2
checkCIF/PLATON results
No syntax errors found
Alert level B PLAT420_ALERT_2_B D-H Without Acceptor O2 - H2A ... ?
0 ALERT level A = In general: serious problem 1 ALERT level B = Potentially serious problem 0 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
A mixture of NiCl2.6H2O (0.060 g, 0.25 mmol) with Na2tda (0.108 g, 0.5 mmol) and bpp (0.050 g, 0.25 mmol), in the molar ratio 1:2:1, and water (4 ml) was placed in a Parr Teflon-lined stainless steel vessel (25 ml). The sealed vessel was heated and held at 423 K for 24 h before the reaction mixture was cooled to room temperature at a rate of 2.5 K h-1. The reaction yielded light-green crystals of (I) in a yield of ca 35% based on bpp. IR spectroscopic analysis (solid KBr disc, ν, cm-1): 3430.3 (m), 1714.5 (s), 1611.3 (s), 1551.2 (m), 1529.0 (m), 1375.4 (vs), 1272.0 (w), 1221.3 (s), 1068.7 (w), 1019.4 (w), 835.0 (w), 772.2 (s), 523.2 (w), 474.8 (m).
H atoms attached to O atoms were located in a difference Fourier map and refined with a global Uiso(H) value. The O—H distances are in the range 0.82 (4)–0.89 (5) Å. H atoms attached to C atoms were placed in geometrically idealized positions, with Csp3—H = 0.97 Å and Csp2—H = 0.93 Å, and constrained to ride on their parent atoms, with Uiso(H) = 1.2Ueq(C).
As an important structural unit, linear bipyridyl ligands such as 4,4'-bipyridine (Wang et al., 2005; Chen et al., 2006; Lou et al., 2006) and 4,4'-bipyridyl with rigid or flexible spacers (Plater et al., 2000; Biradha et al., 2002; Fu et al., 2003; Wu et al., 2005) have been extensively employed to construct novel metal–organic coordination polymers with intriguing structural topologies and unexpected properties with potential applications as functional materials. The compound 1,3-di-4-pyridylpropane (bpp) is a bipyridine-type ligand with a flexible –CH2CH2CH2– spacer, and a number of metal–bpp coordination polymers have been reported (Carlucci et al., 2000, 2002; Pan et al., 2001; Luan et al., 2005). Thiophene-2,5-dicarboxylic acid (H2tda), which is similar to other dicarboxylic acids, such as benzene-1,3-dicarboxylic acid (Bourne et al., 2001; Zhang et al., 2003; Konar et al., 2004), shows diverse coordination modes and can act as a mono-, bi-, tri- or tetradentate ligand (Chen et al., 1998, 1999; Eddaoudi et al., 2002; Zhang et al., 2006; Deng et al., 2006). However, metal coordination polymers based on mixed bpp and thiophene-2,5-dicarboxylate dianions (tda2-) ligands, to our knowledge, have not been reported to date. We report here the title new nickel(II) polymeric compound, [Ni(tda)(bpp)(H2O)2]n, (I), with a two-dimensional grid-type bilayer structure, obtained via hydrothermal synthesis.
The Ni atom of (I) has a distorted octahedral geometry (Fig. 1) defined by two O atoms from two carboxylate groups of two independent tda ligands along the a direction, two N atoms from two bpp ligands along the b direction, and two aqua O atoms (Table 1). Both carboxylate groups of the tda ligand coordinate to Ni in a monodentate syn fashion, with an angle of 11.54 (11)° between the carboxylate planes. The C—O bond distances in both carboxylate groups are almost equivalent, consistent with its delocalized state. The shortest Ni···Ni distance bridged by a tda ligand is 11.024 (4) Å. The bpp ligand is in a trans–gauche conformation and acts as a µ2-bridge linking two Ni centres, with an Ni···Ni separation of 11.828 (5) Å. The angle between the two pyridyl planes is 72.83 (16)°. The twist in the bpp ligand occurs at C7; the C3—C6—C7—C8 torsion angle is 73.2 (4)°. Two water molecules coordinate to the Ni atom in a cis fashion, with O1—Ni1—O2 = 82.05 (11)°.
As shown in Figs. 2 and 3, the Ni atoms are interlinked into a one-dimensional chain by the tda ligands along the a direction and this chain is propagated along the b direction by coordination between the Ni atoms and the flexible bpp ligands, to generate a two-dimensional grid-type layer 1 running parallel to the (001) plane. Two tda and two bpp ligands link four Ni atoms forming an Ni4 grid with dimensions of 11.024 × 11.828 Å2, which is the basic building unit for the whole two-dimensional network of (I) (Fig. 4). Based on layer 1, layers 2, 3 and 4 can also be produced via symmetry operations (-x, 1/2 + y, 1/2 - z), (-x, -y, -z) and (x, 1/2 - y, 1/2 + z), respectively (Fig. 2). As shown in Fig. 3, all Ni atoms in the same layer are coplanar, and the respective distances between planes 1 and 2, planes 2 and 3, and planes 3 and 4 are 1.570 (2), 6.098 (1), and 1.570 (2) Å, respectively.
In the structure of (I), there are two types of hydrogen bonds (Table 2), namely intramolecular O1—H1A···O4 and O1—H1B···O5i hydrogen bonds [symmetry code: (i) -1 + x, y, z], and intermolecular hydrogen bonds between the O2 atoms of the coordinated water molecules and the uncoordinated carboxylate O4ii atoms, O2—H2B···O4ii (Fig. 3) [symmetry code: (ii) 1 - x, 1/2 + y, 1/2 - z], leading to a two-dimensional hydrogen-bonding bilayer architecture between polymeric layers 1 and 2. The bilayer structure is also parallel to the (001) plane. There seems to be no obvious interaction between the bilayer structures, but the grid bilayers stack closely in an offset way. Additionally, there is a contact between O2—H2A and π ring (N2/C11/C10/C9/C13/C12)iii [symmetry code: (iii) 1 - x, -1/2 + y, 1/2 - z], and the distance between atom H2A and the centroid of the π ring is 2.97 (5) Å.
For related literature, see: Biradha et al. (2002); Bourne et al. (2001); Carlucci et al. (2000, 2002); Chen et al. (2006, 1999, 1998); Deng et al. (2006); Eddaoudi et al. (2002); Fu et al. (2003); Konar et al. (2004); Lou et al. (2006); Luan et al. (2005); Pan et al. (2001); Plater et al. (2000); Spek (2003); Wang et al. (2005); Wu et al. (2005); Zhang et al. (2006, 2003).
Data collection: RAPID-AUTO (Rigaku, 2001); cell refinement: RAPID-AUTO; data reduction: RAPID-AUTO; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997a); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997a); molecular graphics: SHELXTL (Sheldrick, 1997b) and Mercury (Macrae et al., 2006); software used to prepare material for publication: SHELXL97 and WinGX (Farrugia, 1999).
[Ni(C6H2O4S)(C13H14N2)(H2O)2] | F(000) = 960 |
Mr = 463.14 | Dx = 1.538 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 7838 reflections |
a = 11.024 (2) Å | θ = 2.0–27.3° |
b = 11.828 (2) Å | µ = 1.11 mm−1 |
c = 16.780 (6) Å | T = 298 K |
β = 113.94 (2)° | Prism, light green |
V = 1999.7 (9) Å3 | 0.30 × 0.25 × 0.18 mm |
Z = 4 |
Rigaku R-AXIS RAPID IP area-detector diffractometer | 3211 reflections with I > 2σ(I) |
ω scans | Rint = 0.033 |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | θmax = 27.3°, θmin = 2.0° |
Tmin = 0.731, Tmax = 0.825 | h = −14→14 |
7838 measured reflections | k = −14→15 |
4504 independent reflections | l = −21→21 |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
R[F2 > 2σ(F2)] = 0.042 | w = 1/[σ2(Fo2) + (0.0469P)2] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.096 | (Δ/σ)max = 0.001 |
S = 1.05 | Δρmax = 0.71 e Å−3 |
4504 reflections | Δρmin = −0.38 e Å−3 |
278 parameters |
[Ni(C6H2O4S)(C13H14N2)(H2O)2] | V = 1999.7 (9) Å3 |
Mr = 463.14 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 11.024 (2) Å | µ = 1.11 mm−1 |
b = 11.828 (2) Å | T = 298 K |
c = 16.780 (6) Å | 0.30 × 0.25 × 0.18 mm |
β = 113.94 (2)° |
Rigaku R-AXIS RAPID IP area-detector diffractometer | 4504 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 3211 reflections with I > 2σ(I) |
Tmin = 0.731, Tmax = 0.825 | Rint = 0.033 |
7838 measured reflections |
R[F2 > 2σ(F2)] = 0.042 | 0 restraints |
wR(F2) = 0.096 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.71 e Å−3 |
4504 reflections | Δρmin = −0.38 e Å−3 |
278 parameters |
Experimental. IR spectroscopic analysis (solid KBr disc, ν, cm-1): 3430.3 (m), 1714.5 (s), 1611.3 (s), 1551.2 (m), 1529.0 (m), 1375.4 (versus), 1272.0 (w), 1221.3 (s), 1068.7 (w), 1019.4 (w), 835.0 (w), 772.2 (s), 523.2 (w), 474.8 (m). |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
Ni1 | 0.33294 (3) | −0.02984 (3) | 0.19881 (2) | 0.02540 (11) | |
S1 | 0.87336 (6) | −0.15078 (6) | 0.26664 (5) | 0.03019 (17) | |
O1 | 0.4077 (2) | −0.1171 (2) | 0.31908 (14) | 0.0365 (5) | |
O2 | 0.3718 (3) | 0.1130 (2) | 0.28245 (18) | 0.0454 (6) | |
O3 | 0.52232 (16) | −0.01725 (17) | 0.20610 (13) | 0.0341 (5) | |
O4 | 0.61008 (19) | −0.17787 (18) | 0.27715 (15) | 0.0416 (5) | |
O5 | 1.15763 (19) | −0.17305 (19) | 0.29222 (14) | 0.0411 (5) | |
O6 | 1.14822 (17) | −0.03662 (19) | 0.19681 (14) | 0.0387 (5) | |
N1 | 0.2659 (2) | 0.0805 (2) | 0.09064 (16) | 0.0332 (5) | |
N2 | 0.3041 (2) | 0.8199 (2) | 0.12500 (16) | 0.0315 (5) | |
C1 | 0.3449 (3) | 0.1259 (3) | 0.0563 (2) | 0.0435 (8) | |
H1 | 0.4321 | 0.1004 | 0.0766 | 0.052* | |
C2 | 0.3053 (3) | 0.2080 (3) | −0.0070 (2) | 0.0449 (8) | |
H2 | 0.3647 | 0.235 | −0.0291 | 0.054* | |
C3 | 0.1783 (3) | 0.2508 (2) | −0.03801 (18) | 0.0342 (6) | |
C4 | 0.0960 (3) | 0.2019 (3) | −0.0040 (2) | 0.0554 (10) | |
H4 | 0.0082 | 0.2257 | −0.0236 | 0.066* | |
C5 | 0.1413 (3) | 0.1193 (3) | 0.0581 (2) | 0.0515 (9) | |
H5 | 0.0821 | 0.0883 | 0.0788 | 0.062* | |
C6 | 0.1313 (3) | 0.3476 (3) | −0.1018 (2) | 0.0428 (8) | |
H6A | 0.0398 | 0.3347 | −0.1417 | 0.051* | |
H6B | 0.1846 | 0.3509 | −0.1357 | 0.051* | |
C7 | 0.1418 (3) | 0.4603 (3) | −0.0545 (2) | 0.0396 (7) | |
H7A | 0.0905 | 0.5168 | −0.0966 | 0.048* | |
H7B | 0.1029 | 0.4516 | −0.0123 | 0.048* | |
C8 | 0.2833 (3) | 0.5023 (3) | −0.0078 (2) | 0.0446 (8) | |
H8A | 0.3347 | 0.4464 | 0.0349 | 0.054* | |
H8B | 0.3227 | 0.5108 | −0.0497 | 0.054* | |
C9 | 0.2906 (3) | 0.6137 (3) | 0.0375 (2) | 0.0371 (7) | |
C10 | 0.3346 (4) | 0.7122 (3) | 0.0135 (2) | 0.0550 (10) | |
H10 | 0.3604 | 0.7116 | −0.0328 | 0.066* | |
C11 | 0.3402 (4) | 0.8112 (3) | 0.0580 (2) | 0.0492 (9) | |
H11 | 0.3709 | 0.8758 | 0.0406 | 0.059* | |
C12 | 0.2606 (3) | 0.7246 (3) | 0.14740 (19) | 0.0371 (7) | |
H12 | 0.2343 | 0.7273 | 0.1935 | 0.045* | |
C13 | 0.2526 (3) | 0.6234 (3) | 0.1061 (2) | 0.0389 (7) | |
H13 | 0.2211 | 0.5601 | 0.1246 | 0.047* | |
C14 | 0.6135 (2) | −0.0898 (2) | 0.23658 (18) | 0.0284 (6) | |
C15 | 0.7364 (2) | −0.0646 (2) | 0.22304 (18) | 0.0287 (6) | |
C16 | 0.7592 (3) | 0.0253 (3) | 0.1796 (2) | 0.0380 (7) | |
H16 | 0.6972 | 0.0817 | 0.1528 | 0.046* | |
C17 | 0.8873 (3) | 0.0227 (3) | 0.1801 (2) | 0.0386 (7) | |
H17 | 0.9186 | 0.0768 | 0.1529 | 0.046* | |
C18 | 0.9606 (2) | −0.0676 (2) | 0.22476 (18) | 0.0286 (6) | |
C19 | 1.1005 (2) | −0.0961 (3) | 0.23969 (19) | 0.0303 (6) | |
H1A | 0.464 (4) | −0.161 (3) | 0.317 (2) | 0.059 (12)* | |
H1B | 0.343 (4) | −0.144 (3) | 0.324 (3) | 0.069 (13)* | |
H2A | 0.445 (5) | 0.102 (4) | 0.322 (3) | 0.083 (16)* | |
H2B | 0.382 (4) | 0.183 (4) | 0.266 (3) | 0.085 (16)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Ni1 | 0.01988 (15) | 0.02479 (19) | 0.0348 (2) | −0.000 (14) | 0.01443 (13) | 0.00044 (16) |
S1 | 0.0226 (3) | 0.0324 (4) | 0.0402 (4) | 0.0004 (3) | 0.0174 (3) | 0.0007 (3) |
O1 | 0.0275 (10) | 0.0439 (13) | 0.0416 (13) | 0.0040 (10) | 0.0175 (9) | 0.0014 (10) |
O2 | 0.0494 (14) | 0.0348 (14) | 0.0545 (16) | −0.0002 (12) | 0.0237 (13) | −0.0069 (12) |
O3 | 0.0218 (9) | 0.0324 (11) | 0.0518 (13) | 0.0034 (8) | 0.0187 (9) | 0.0045 (9) |
O4 | 0.0337 (10) | 0.0354 (13) | 0.0658 (15) | 0.0067 (9) | 0.0305 (11) | 0.0123 (11) |
O5 | 0.0303 (10) | 0.0478 (14) | 0.0504 (14) | 0.0064 (10) | 0.0216 (10) | 0.0138 (11) |
O6 | 0.0249 (9) | 0.0482 (13) | 0.0495 (13) | 0.0020 (9) | 0.0217 (9) | 0.0123 (11) |
N1 | 0.0315 (11) | 0.0295 (13) | 0.0415 (15) | −0.0009 (10) | 0.0177 (11) | 0.0032 (11) |
N2 | 0.0318 (11) | 0.0296 (14) | 0.0341 (14) | −0.0034 (10) | 0.0144 (10) | −0.0005 (10) |
C1 | 0.0363 (15) | 0.0387 (19) | 0.063 (2) | 0.0085 (14) | 0.0278 (15) | 0.0157 (16) |
C2 | 0.0488 (17) | 0.043 (2) | 0.054 (2) | 0.0008 (15) | 0.0321 (16) | 0.0083 (16) |
C3 | 0.0424 (15) | 0.0281 (16) | 0.0284 (15) | −0.0014 (13) | 0.0106 (13) | −0.0032 (12) |
C4 | 0.0341 (16) | 0.070 (3) | 0.060 (2) | 0.0114 (17) | 0.0172 (16) | 0.028 (2) |
C5 | 0.0314 (15) | 0.065 (2) | 0.060 (2) | 0.0019 (16) | 0.0203 (15) | 0.0244 (18) |
C6 | 0.0574 (19) | 0.0341 (18) | 0.0304 (17) | −0.0026 (15) | 0.0112 (14) | 0.0007 (13) |
C7 | 0.0492 (17) | 0.0321 (17) | 0.0312 (16) | 0.0029 (14) | 0.0098 (13) | −0.0008 (13) |
C8 | 0.0506 (18) | 0.0352 (19) | 0.048 (2) | −0.0007 (14) | 0.0202 (16) | −0.0095 (14) |
C9 | 0.0383 (15) | 0.0342 (17) | 0.0359 (17) | −0.0013 (14) | 0.0120 (13) | −0.0066 (14) |
C10 | 0.086 (3) | 0.046 (2) | 0.052 (2) | −0.019 (2) | 0.048 (2) | −0.0150 (18) |
C11 | 0.075 (2) | 0.0388 (19) | 0.046 (2) | −0.0162 (18) | 0.0363 (18) | −0.0032 (15) |
C12 | 0.0421 (15) | 0.0378 (18) | 0.0349 (17) | −0.0024 (14) | 0.0191 (13) | −0.0014 (14) |
C13 | 0.0506 (17) | 0.0303 (17) | 0.0365 (17) | −0.0059 (14) | 0.0186 (14) | 0.0003 (13) |
C14 | 0.0230 (12) | 0.0306 (16) | 0.0357 (16) | −0.0003 (12) | 0.0160 (11) | −0.0054 (13) |
C15 | 0.0208 (12) | 0.0329 (16) | 0.0347 (15) | −0.0005 (11) | 0.0138 (11) | −0.0045 (12) |
C16 | 0.0288 (13) | 0.0400 (18) | 0.0499 (19) | 0.0076 (14) | 0.0208 (13) | 0.0091 (16) |
C17 | 0.0296 (13) | 0.0420 (18) | 0.0512 (19) | 0.0005 (14) | 0.0238 (13) | 0.0111 (16) |
C18 | 0.0225 (11) | 0.0329 (15) | 0.0341 (15) | −0.0056 (11) | 0.0153 (11) | −0.0052 (12) |
C19 | 0.0238 (12) | 0.0373 (17) | 0.0345 (16) | −0.0035 (12) | 0.0168 (11) | −0.0062 (13) |
Ni1—O6i | 2.0245 (18) | C4—C5 | 1.366 (5) |
Ni1—O3 | 2.0466 (17) | C4—H4 | 0.9300 |
Ni1—N1 | 2.111 (3) | C5—H5 | 0.9300 |
Ni1—O1 | 2.114 (2) | C6—C7 | 1.532 (4) |
Ni1—N2ii | 2.115 (2) | C6—H6A | 0.9700 |
Ni1—O2 | 2.126 (2) | C6—H6B | 0.9700 |
S1—C18 | 1.713 (3) | C7—C8 | 1.518 (4) |
S1—C15 | 1.720 (3) | C7—H7A | 0.9700 |
O1—H1A | 0.83 (4) | C7—H7B | 0.9700 |
O1—H1B | 0.82 (4) | C8—C9 | 1.506 (4) |
O2—H2A | 0.83 (5) | C8—H8A | 0.9700 |
O2—H2B | 0.89 (5) | C8—H8B | 0.9700 |
O3—C14 | 1.262 (3) | C9—C13 | 1.381 (4) |
O4—C14 | 1.253 (3) | C9—C10 | 1.384 (4) |
O5—C19 | 1.246 (4) | C10—C11 | 1.377 (5) |
O6—C19 | 1.264 (3) | C10—H10 | 0.9300 |
O6—Ni1iii | 2.0245 (18) | C11—H11 | 0.9300 |
N1—C5 | 1.337 (4) | C12—C13 | 1.368 (4) |
N1—C1 | 1.337 (4) | C12—H12 | 0.9300 |
N2—C12 | 1.337 (4) | C13—H13 | 0.9300 |
N2—C11 | 1.340 (4) | C14—C15 | 1.492 (3) |
N2—Ni1iv | 2.115 (2) | C15—C16 | 1.369 (4) |
C1—C2 | 1.374 (4) | C16—C17 | 1.409 (4) |
C1—H1 | 0.9300 | C16—H16 | 0.9300 |
C2—C3 | 1.376 (4) | C17—C18 | 1.366 (4) |
C2—H2 | 0.9300 | C17—H17 | 0.9300 |
C3—C4 | 1.380 (4) | C18—C19 | 1.497 (3) |
C3—C6 | 1.508 (4) | ||
O6i—Ni1—O3 | 177.04 (9) | C3—C6—H6B | 109.4 |
O6i—Ni1—N1 | 90.64 (8) | C7—C6—H6B | 109.4 |
O3—Ni1—N1 | 89.96 (8) | H6A—C6—H6B | 108.0 |
O6i—Ni1—O1 | 89.80 (9) | C8—C7—C6 | 113.5 (3) |
O3—Ni1—O1 | 89.15 (9) | C8—C7—H7A | 108.9 |
N1—Ni1—O1 | 171.03 (9) | C6—C7—H7A | 108.9 |
O6i—Ni1—N2ii | 92.62 (9) | C8—C7—H7B | 108.9 |
O3—Ni1—N2ii | 90.20 (8) | C6—C7—H7B | 108.9 |
N1—Ni1—N2ii | 95.69 (10) | H7A—C7—H7B | 107.7 |
O1—Ni1—N2ii | 93.23 (9) | C9—C8—C7 | 112.4 (3) |
O6i—Ni1—O2 | 88.53 (9) | C9—C8—H8A | 109.1 |
O3—Ni1—O2 | 88.59 (9) | C7—C8—H8A | 109.1 |
N1—Ni1—O2 | 89.01 (11) | C9—C8—H8B | 109.1 |
O1—Ni1—O2 | 82.05 (11) | C7—C8—H8B | 109.1 |
N2ii—Ni1—O2 | 175.15 (11) | H8A—C8—H8B | 107.9 |
C18—S1—C15 | 91.57 (13) | C13—C9—C10 | 115.7 (3) |
Ni1—O1—H1A | 106 (3) | C13—C9—C8 | 121.4 (3) |
Ni1—O1—H1B | 106 (3) | C10—C9—C8 | 122.9 (3) |
H1A—O1—H1B | 118 (4) | C11—C10—C9 | 120.1 (3) |
Ni1—O2—H2A | 106 (3) | C11—C10—H10 | 119.9 |
Ni1—O2—H2B | 124 (3) | C9—C10—H10 | 119.9 |
H2A—O2—H2B | 101 (4) | N2—C11—C10 | 123.9 (3) |
C14—O3—Ni1 | 126.91 (18) | N2—C11—H11 | 118.1 |
C19—O6—Ni1iii | 131.38 (19) | C10—C11—H11 | 118.1 |
C5—N1—C1 | 115.3 (3) | N2—C12—C13 | 123.5 (3) |
C5—N1—Ni1 | 120.5 (2) | N2—C12—H12 | 118.2 |
C1—N1—Ni1 | 123.8 (2) | C13—C12—H12 | 118.2 |
C12—N2—C11 | 115.7 (3) | C12—C13—C9 | 121.1 (3) |
C12—N2—Ni1iv | 122.0 (2) | C12—C13—H13 | 119.5 |
C11—N2—Ni1iv | 122.1 (2) | C9—C13—H13 | 119.5 |
N1—C1—C2 | 124.0 (3) | O4—C14—O3 | 126.2 (2) |
N1—C1—H1 | 118.0 | O4—C14—C15 | 118.6 (2) |
C2—C1—H1 | 118.0 | O3—C14—C15 | 115.2 (2) |
C1—C2—C3 | 120.5 (3) | C16—C15—C14 | 127.7 (2) |
C1—C2—H2 | 119.7 | C16—C15—S1 | 111.56 (19) |
C3—C2—H2 | 119.7 | C14—C15—S1 | 120.8 (2) |
C2—C3—C4 | 115.4 (3) | C15—C16—C17 | 112.4 (3) |
C2—C3—C6 | 123.4 (3) | C15—C16—H16 | 123.8 |
C4—C3—C6 | 121.2 (3) | C17—C16—H16 | 123.8 |
C5—C4—C3 | 121.1 (3) | C18—C17—C16 | 112.8 (3) |
C5—C4—H4 | 119.4 | C18—C17—H17 | 123.6 |
C3—C4—H4 | 119.4 | C16—C17—H17 | 123.6 |
N1—C5—C4 | 123.6 (3) | C17—C18—C19 | 127.4 (3) |
N1—C5—H5 | 118.2 | C17—C18—S1 | 111.65 (19) |
C4—C5—H5 | 118.2 | C19—C18—S1 | 120.9 (2) |
C3—C6—C7 | 111.2 (2) | O5—C19—O6 | 127.0 (2) |
C3—C6—H6A | 109.4 | O5—C19—C18 | 118.3 (2) |
C7—C6—H6A | 109.4 | O6—C19—C18 | 114.7 (3) |
N1—Ni1—O3—C14 | −153.1 (2) | C12—N2—C11—C10 | −0.1 (5) |
O1—Ni1—O3—C14 | 35.8 (2) | Ni1iv—N2—C11—C10 | 173.7 (3) |
N2ii—Ni1—O3—C14 | −57.4 (2) | C9—C10—C11—N2 | −0.5 (6) |
O2—Ni1—O3—C14 | 117.9 (2) | C11—N2—C12—C13 | 0.2 (4) |
O6i—Ni1—N1—C5 | 4.9 (3) | Ni1iv—N2—C12—C13 | −173.6 (2) |
O3—Ni1—N1—C5 | −172.2 (3) | N2—C12—C13—C9 | 0.3 (5) |
N2ii—Ni1—N1—C5 | 97.6 (3) | C10—C9—C13—C12 | −0.8 (5) |
O2—Ni1—N1—C5 | −83.6 (3) | C8—C9—C13—C12 | 179.5 (3) |
O6i—Ni1—N1—C1 | 177.3 (3) | Ni1—O3—C14—O4 | −8.7 (4) |
O3—Ni1—N1—C1 | 0.2 (3) | Ni1—O3—C14—C15 | 172.38 (17) |
N2ii—Ni1—N1—C1 | −90.0 (3) | O4—C14—C15—C16 | 178.8 (3) |
O2—Ni1—N1—C1 | 88.8 (3) | O3—C14—C15—C16 | −2.2 (4) |
C5—N1—C1—C2 | 1.0 (5) | O4—C14—C15—S1 | −3.1 (4) |
Ni1—N1—C1—C2 | −171.8 (3) | O3—C14—C15—S1 | 175.9 (2) |
N1—C1—C2—C3 | 1.4 (6) | C18—S1—C15—C16 | −1.1 (2) |
C1—C2—C3—C4 | −2.8 (5) | C18—S1—C15—C14 | −179.5 (2) |
C1—C2—C3—C6 | 174.7 (3) | C14—C15—C16—C17 | 179.6 (3) |
C2—C3—C4—C5 | 1.8 (5) | S1—C15—C16—C17 | 1.4 (4) |
C6—C3—C4—C5 | −175.7 (3) | C15—C16—C17—C18 | −0.9 (4) |
C1—N1—C5—C4 | −2.0 (6) | C16—C17—C18—C19 | −179.0 (3) |
Ni1—N1—C5—C4 | 171.1 (3) | C16—C17—C18—S1 | 0.1 (4) |
C3—C4—C5—N1 | 0.6 (6) | C15—S1—C18—C17 | 0.6 (2) |
C2—C3—C6—C7 | −95.4 (4) | C15—S1—C18—C19 | 179.7 (2) |
C4—C3—C6—C7 | 81.8 (4) | Ni1iii—O6—C19—O5 | −4.8 (5) |
C3—C6—C7—C8 | 73.2 (4) | Ni1iii—O6—C19—C18 | 174.45 (18) |
C6—C7—C8—C9 | 179.5 (3) | C17—C18—C19—O5 | 170.1 (3) |
C7—C8—C9—C13 | 64.8 (4) | S1—C18—C19—O5 | −8.9 (4) |
C7—C8—C9—C10 | −114.9 (4) | C17—C18—C19—O6 | −9.3 (4) |
C13—C9—C10—C11 | 0.9 (5) | S1—C18—C19—O6 | 171.7 (2) |
C8—C9—C10—C11 | −179.4 (3) |
Symmetry codes: (i) x−1, y, z; (ii) x, y−1, z; (iii) x+1, y, z; (iv) x, y+1, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1A···O4 | 0.83 (4) | 1.98 (4) | 2.695 (3) | 144 (3) |
O1—H1B···O5i | 0.82 (4) | 1.92 (4) | 2.690 (3) | 156 (4) |
O2—H2B···O4v | 0.89 (5) | 1.81 (5) | 2.706 (3) | 174 (4) |
Symmetry codes: (i) x−1, y, z; (v) −x+1, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [Ni(C6H2O4S)(C13H14N2)(H2O)2] |
Mr | 463.14 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 298 |
a, b, c (Å) | 11.024 (2), 11.828 (2), 16.780 (6) |
β (°) | 113.94 (2) |
V (Å3) | 1999.7 (9) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.11 |
Crystal size (mm) | 0.30 × 0.25 × 0.18 |
Data collection | |
Diffractometer | Rigaku R-AXIS RAPID IP area-detector |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.731, 0.825 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7838, 4504, 3211 |
Rint | 0.033 |
(sin θ/λ)max (Å−1) | 0.646 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.042, 0.096, 1.05 |
No. of reflections | 4504 |
No. of parameters | 278 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.71, −0.38 |
Computer programs: RAPID-AUTO (Rigaku, 2001), RAPID-AUTO, SHELXS97 (Sheldrick, 1997a), SHELXL97 (Sheldrick, 1997a), SHELXTL (Sheldrick, 1997b) and Mercury (Macrae et al., 2006), SHELXL97 and WinGX (Farrugia, 1999).
Ni1—O6i | 2.0245 (18) | Ni1—O1 | 2.114 (2) |
Ni1—O3 | 2.0466 (17) | Ni1—N2ii | 2.115 (2) |
Ni1—N1 | 2.111 (3) | Ni1—O2 | 2.126 (2) |
Symmetry codes: (i) x−1, y, z; (ii) x, y−1, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1A···O4 | 0.83 (4) | 1.98 (4) | 2.695 (3) | 144 (3) |
O1—H1B···O5i | 0.82 (4) | 1.92 (4) | 2.690 (3) | 156 (4) |
O2—H2B···O4iii | 0.89 (5) | 1.81 (5) | 2.706 (3) | 174 (4) |
Symmetry codes: (i) x−1, y, z; (iii) −x+1, y+1/2, −z+1/2. |
As an important structural unit, linear bipyridyl ligands such as 4,4'-bipyridine (Wang et al., 2005; Chen et al., 2006; Lou et al., 2006) and 4,4'-bipyridyl with rigid or flexible spacers (Plater et al., 2000; Biradha et al., 2002; Fu et al., 2003; Wu et al., 2005) have been extensively employed to construct novel metal–organic coordination polymers with intriguing structural topologies and unexpected properties with potential applications as functional materials. The compound 1,3-di-4-pyridylpropane (bpp) is a bipyridine-type ligand with a flexible –CH2CH2CH2– spacer, and a number of metal–bpp coordination polymers have been reported (Carlucci et al., 2000, 2002; Pan et al., 2001; Luan et al., 2005). Thiophene-2,5-dicarboxylic acid (H2tda), which is similar to other dicarboxylic acids, such as benzene-1,3-dicarboxylic acid (Bourne et al., 2001; Zhang et al., 2003; Konar et al., 2004), shows diverse coordination modes and can act as a mono-, bi-, tri- or tetradentate ligand (Chen et al., 1998, 1999; Eddaoudi et al., 2002; Zhang et al., 2006; Deng et al., 2006). However, metal coordination polymers based on mixed bpp and thiophene-2,5-dicarboxylate dianions (tda2-) ligands, to our knowledge, have not been reported to date. We report here the title new nickel(II) polymeric compound, [Ni(tda)(bpp)(H2O)2]n, (I), with a two-dimensional grid-type bilayer structure, obtained via hydrothermal synthesis.
The Ni atom of (I) has a distorted octahedral geometry (Fig. 1) defined by two O atoms from two carboxylate groups of two independent tda ligands along the a direction, two N atoms from two bpp ligands along the b direction, and two aqua O atoms (Table 1). Both carboxylate groups of the tda ligand coordinate to Ni in a monodentate syn fashion, with an angle of 11.54 (11)° between the carboxylate planes. The C—O bond distances in both carboxylate groups are almost equivalent, consistent with its delocalized state. The shortest Ni···Ni distance bridged by a tda ligand is 11.024 (4) Å. The bpp ligand is in a trans–gauche conformation and acts as a µ2-bridge linking two Ni centres, with an Ni···Ni separation of 11.828 (5) Å. The angle between the two pyridyl planes is 72.83 (16)°. The twist in the bpp ligand occurs at C7; the C3—C6—C7—C8 torsion angle is 73.2 (4)°. Two water molecules coordinate to the Ni atom in a cis fashion, with O1—Ni1—O2 = 82.05 (11)°.
As shown in Figs. 2 and 3, the Ni atoms are interlinked into a one-dimensional chain by the tda ligands along the a direction and this chain is propagated along the b direction by coordination between the Ni atoms and the flexible bpp ligands, to generate a two-dimensional grid-type layer 1 running parallel to the (001) plane. Two tda and two bpp ligands link four Ni atoms forming an Ni4 grid with dimensions of 11.024 × 11.828 Å2, which is the basic building unit for the whole two-dimensional network of (I) (Fig. 4). Based on layer 1, layers 2, 3 and 4 can also be produced via symmetry operations (-x, 1/2 + y, 1/2 - z), (-x, -y, -z) and (x, 1/2 - y, 1/2 + z), respectively (Fig. 2). As shown in Fig. 3, all Ni atoms in the same layer are coplanar, and the respective distances between planes 1 and 2, planes 2 and 3, and planes 3 and 4 are 1.570 (2), 6.098 (1), and 1.570 (2) Å, respectively.
In the structure of (I), there are two types of hydrogen bonds (Table 2), namely intramolecular O1—H1A···O4 and O1—H1B···O5i hydrogen bonds [symmetry code: (i) -1 + x, y, z], and intermolecular hydrogen bonds between the O2 atoms of the coordinated water molecules and the uncoordinated carboxylate O4ii atoms, O2—H2B···O4ii (Fig. 3) [symmetry code: (ii) 1 - x, 1/2 + y, 1/2 - z], leading to a two-dimensional hydrogen-bonding bilayer architecture between polymeric layers 1 and 2. The bilayer structure is also parallel to the (001) plane. There seems to be no obvious interaction between the bilayer structures, but the grid bilayers stack closely in an offset way. Additionally, there is a contact between O2—H2A and π ring (N2/C11/C10/C9/C13/C12)iii [symmetry code: (iii) 1 - x, -1/2 + y, 1/2 - z], and the distance between atom H2A and the centroid of the π ring is 2.97 (5) Å.