supplementary materials
Piperazinediium bis(pyridine-2,6-dicarboxylato)nickelate(II) tetrahydrate
The proton-transfer ion pair was prepared by a reaction between piperazine and
pyridine-2,6-dicarboxylic acid. Starting with a 1:1 molar ratio of the
reactants in THF, a puffy white precipitate was obtained. By recrystallization
in an aqueous solution, pale-yellow crystals were obtained. A solution of
Ni(NO3)2.6H2O (145 mg, 0.5 mmol) in water (20 ml) was added to an
aqueous solution of (pipzH2)(pydc) (253 mg, 1.0 mmol) in water (20 ml) in a
1:2 molar ratio. Green crystals of (I) suitable for X-ray characterization
were obtained after a few days at room temperature.
Hydrogen atoms were positioned geometrically and refined with a riding model
(including torsional freedom for methyl groups), with C—H = 0.95–0.98 Å,
and with U(H) constrained to be 1.2 (1.5 for methyl groups) times Ueq
of the carrier atom.
Data collection: SMART (Bruker, 1998); cell refinement: SAINT (Bruker, 1998); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 1998); software used to prepare material for publication: SHELXTL.
Piperazinediium bis(pyridine-2,6-dicarboxylato)nickelate(II) tetrahydrate
top
Crystal data top
| (C4H12N2)[Ni(C7H3NO4)2]·4H2O | F(000) = 1144 |
| Mr = 549.14 | Dx = 1.636 Mg m−3 |
| Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
| a = 7.9776 (11) Å | Cell parameters from 6417 reflections |
| b = 13.2767 (19) Å | θ = 2.5–27.0° |
| c = 21.054 (3) Å | µ = 0.94 mm−1 |
| β = 90.502 (2)° | T = 150 K |
| V = 2229.8 (5) Å3 | Block, green |
| Z = 4 | 0.18 × 0.15 × 0.07 mm |
Data collection top
Bruker SMART area-detector diffractometer | 5111 independent reflections |
| Radiation source: fine-focus sealed tube | 3612 reflections with I > 2σ(I) |
| graphite | Rint = 0.054 |
| Detector resolution: 100 pixels mm-1 | θmax = 27.6°, θmin = 1.8° |
| ω scans | h = −10→10 |
Absorption correction: multi-scan (SADABS; Bruker, 1998) | k = −17→17 |
| Tmin = 0.849, Tmax = 0.937 | l = −27→27 |
| 25180 measured reflections | |
Refinement top
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.038 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.094 | H-atom parameters constrained |
| S = 1.01 | w = 1/[σ2(Fo2) + (0.0467P)2] where P = (Fo2 + 2Fc2)/3 |
| 5111 reflections | (Δ/σ)max < 0.001 |
| 318 parameters | Δρmax = 0.36 e Å−3 |
| 0 restraints | Δρmin = −0.42 e Å−3 |
Crystal data top
| (C4H12N2)[Ni(C7H3NO4)2]·4H2O | V = 2229.8 (5) Å3 |
| Mr = 549.14 | Z = 4 |
| Monoclinic, P21/n | Mo Kα radiation |
| a = 7.9776 (11) Å | µ = 0.94 mm−1 |
| b = 13.2767 (19) Å | T = 150 K |
| c = 21.054 (3) Å | 0.18 × 0.15 × 0.07 mm |
| β = 90.502 (2)° | |
Data collection top
Bruker SMART area-detector diffractometer | 5111 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 1998) | 3612 reflections with I > 2σ(I) |
| Tmin = 0.849, Tmax = 0.937 | Rint = 0.054 |
| 25180 measured reflections | θmax = 27.6° |
Refinement top
| R[F2 > 2σ(F2)] = 0.038 | H-atom parameters constrained |
| wR(F2) = 0.094 | Δρmax = 0.36 e Å−3 |
| S = 1.01 | Δρmin = −0.42 e Å−3 |
| 5111 reflections | Absolute structure: ? |
| 318 parameters | Flack parameter: ? |
| 0 restraints | Rogers parameter: ? |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top| | x | y | z | Uiso*/Ueq | |
| Ni1 | 0.23343 (4) | 0.75474 (2) | 0.007996 (14) | 0.01605 (10) | |
| O1 | 0.40312 (19) | 0.70749 (12) | −0.06451 (8) | 0.0202 (4) | |
| O2 | 0.4609 (2) | 0.57156 (12) | −0.12315 (8) | 0.0223 (4) | |
| O3 | −0.0547 (2) | 0.61563 (12) | 0.14314 (8) | 0.0218 (4) | |
| O4 | 0.0453 (2) | 0.73511 (11) | 0.07875 (8) | 0.0205 (4) | |
| O5 | 0.4136 (2) | 0.76423 (12) | 0.08329 (8) | 0.0214 (4) | |
| O6 | 0.5285 (2) | 0.87901 (13) | 0.14854 (8) | 0.0256 (4) | |
| O7 | 0.0134 (2) | 0.95380 (13) | −0.11768 (8) | 0.0256 (4) | |
| O8 | 0.07588 (19) | 0.80978 (12) | −0.06660 (8) | 0.0204 (4) | |
| O9 | 0.0331 (2) | 0.11768 (14) | 0.32180 (9) | 0.0364 (5) | |
| H9B | 0.0478 | 0.1686 | 0.3531 | 0.048 (9)* | |
| H9A | −0.0006 | 0.0605 | 0.3456 | 0.077 (12)* | |
| O10 | 0.7399 (2) | 0.44110 (14) | 0.71874 (9) | 0.0328 (5) | |
| H10A | 0.6671 | 0.4377 | 0.6829 | 0.039* | |
| H10B | 0.6714 | 0.4158 | 0.7518 | 0.039* | |
| O11 | −0.0361 (2) | 0.43955 (13) | 0.21897 (8) | 0.0304 (4) | |
| H11A | 0.0223 | 0.4592 | 0.2565 | 0.036* | |
| H11B | −0.0404 | 0.4999 | 0.1947 | 0.036* | |
| O12 | 0.1234 (2) | 0.26988 (13) | 0.16332 (9) | 0.0291 (4) | |
| H12B | 0.0522 | 0.2448 | 0.1305 | 0.035* | |
| H12A | 0.0542 | 0.3246 | 0.1758 | 0.035* | |
| N1 | 0.2149 (2) | 0.60746 (14) | 0.01186 (9) | 0.0156 (4) | |
| N2 | 0.2654 (2) | 0.90052 (14) | 0.01493 (9) | 0.0152 (4) | |
| N3 | 0.4462 (2) | 0.27255 (15) | 0.20231 (9) | 0.0207 (5) | |
| H3B | 0.4720 | 0.3226 | 0.1753 | 0.025* | |
| H3A | 0.3530 | 0.2441 | 0.1860 | 0.025* | |
| N4 | 0.7096 (2) | 0.27635 (14) | 0.29515 (9) | 0.0195 (5) | |
| H4B | 0.8001 | 0.3024 | 0.3150 | 0.023* | |
| H4A | 0.6636 | 0.2288 | 0.3200 | 0.023* | |
| C1 | 0.3960 (3) | 0.61423 (18) | −0.07599 (11) | 0.0176 (5) | |
| C2 | 0.3014 (3) | 0.55085 (17) | −0.02846 (11) | 0.0159 (5) | |
| C3 | 0.3007 (3) | 0.44672 (18) | −0.02384 (11) | 0.0192 (5) | |
| H3 | 0.3609 | 0.4062 | −0.0531 | 0.023* | |
| C4 | 0.2093 (3) | 0.40361 (18) | 0.02486 (11) | 0.0200 (5) | |
| H4 | 0.2071 | 0.3325 | 0.0295 | 0.024* | |
| C5 | 0.1213 (3) | 0.46372 (17) | 0.06671 (11) | 0.0192 (5) | |
| H5 | 0.0595 | 0.4345 | 0.1004 | 0.023* | |
| C6 | 0.1251 (3) | 0.56680 (17) | 0.05859 (11) | 0.0167 (5) | |
| C7 | 0.0316 (3) | 0.64473 (17) | 0.09696 (11) | 0.0176 (5) | |
| C8 | 0.4416 (3) | 0.85382 (18) | 0.10199 (11) | 0.0184 (5) | |
| C9 | 0.3618 (3) | 0.93598 (17) | 0.06175 (11) | 0.0164 (5) | |
| C10 | 0.3872 (3) | 1.03821 (17) | 0.06906 (11) | 0.0182 (5) | |
| H10 | 0.4550 | 1.0635 | 0.1028 | 0.022* | |
| C11 | 0.3114 (3) | 1.10280 (18) | 0.02607 (12) | 0.0211 (5) | |
| H11 | 0.3280 | 1.1734 | 0.0299 | 0.025* | |
| C12 | 0.2111 (3) | 1.06511 (17) | −0.02263 (11) | 0.0185 (5) | |
| H12 | 0.1590 | 1.1090 | −0.0525 | 0.022* | |
| C13 | 0.1889 (3) | 0.96183 (17) | −0.02646 (11) | 0.0164 (5) | |
| C14 | 0.0830 (3) | 0.90522 (18) | −0.07527 (11) | 0.0178 (5) | |
| C15 | 0.5776 (3) | 0.19368 (18) | 0.20308 (12) | 0.0216 (5) | |
| H15A | 0.5970 | 0.1697 | 0.1592 | 0.026* | |
| H15B | 0.5393 | 0.1357 | 0.2288 | 0.026* | |
| C16 | 0.4186 (3) | 0.31777 (19) | 0.26631 (11) | 0.0223 (5) | |
| H16A | 0.3736 | 0.2661 | 0.2954 | 0.027* | |
| H16B | 0.3357 | 0.3730 | 0.2630 | 0.027* | |
| C17 | 0.5813 (3) | 0.35802 (18) | 0.29238 (12) | 0.0245 (6) | |
| H17A | 0.6217 | 0.4134 | 0.2650 | 0.029* | |
| H17B | 0.5635 | 0.3855 | 0.3355 | 0.029* | |
| C18 | 0.7395 (3) | 0.23442 (18) | 0.23072 (12) | 0.0206 (5) | |
| H18A | 0.8237 | 0.1798 | 0.2334 | 0.025* | |
| H18B | 0.7841 | 0.2878 | 0.2027 | 0.025* | |
Atomic displacement parameters (Å2) top| | U11 | U22 | U33 | U12 | U13 | U23 |
| Ni1 | 0.01895 (16) | 0.01449 (16) | 0.01470 (17) | −0.00075 (13) | −0.00121 (11) | −0.00007 (13) |
| O1 | 0.0234 (9) | 0.0173 (9) | 0.0199 (9) | −0.0017 (7) | 0.0036 (7) | −0.0006 (7) |
| O2 | 0.0268 (9) | 0.0224 (9) | 0.0176 (9) | 0.0025 (7) | 0.0040 (7) | −0.0021 (7) |
| O3 | 0.0284 (9) | 0.0205 (9) | 0.0164 (9) | 0.0003 (7) | 0.0051 (7) | 0.0011 (7) |
| O4 | 0.0263 (9) | 0.0180 (9) | 0.0173 (9) | 0.0015 (7) | 0.0032 (7) | −0.0002 (7) |
| O5 | 0.0274 (9) | 0.0177 (9) | 0.0190 (9) | 0.0029 (7) | −0.0055 (7) | 0.0010 (7) |
| O6 | 0.0270 (9) | 0.0275 (10) | 0.0221 (10) | 0.0057 (8) | −0.0125 (8) | −0.0034 (8) |
| O7 | 0.0295 (10) | 0.0274 (10) | 0.0197 (10) | −0.0041 (8) | −0.0115 (8) | 0.0067 (8) |
| O8 | 0.0229 (9) | 0.0189 (9) | 0.0192 (10) | −0.0030 (7) | −0.0063 (7) | −0.0005 (7) |
| O9 | 0.0616 (13) | 0.0251 (10) | 0.0226 (11) | −0.0076 (9) | 0.0043 (10) | −0.0009 (9) |
| O10 | 0.0251 (10) | 0.0455 (12) | 0.0277 (11) | −0.0005 (8) | −0.0042 (8) | −0.0036 (9) |
| O11 | 0.0461 (11) | 0.0246 (10) | 0.0204 (10) | −0.0028 (8) | −0.0056 (9) | 0.0027 (8) |
| O12 | 0.0230 (9) | 0.0279 (10) | 0.0363 (11) | 0.0005 (7) | −0.0109 (8) | −0.0049 (8) |
| N1 | 0.0179 (10) | 0.0162 (10) | 0.0125 (10) | −0.0002 (8) | −0.0020 (8) | −0.0006 (8) |
| N2 | 0.0145 (9) | 0.0184 (10) | 0.0126 (10) | −0.0002 (8) | −0.0014 (8) | −0.0009 (8) |
| N3 | 0.0185 (10) | 0.0279 (12) | 0.0157 (11) | −0.0053 (8) | −0.0028 (8) | 0.0014 (9) |
| N4 | 0.0199 (10) | 0.0206 (11) | 0.0178 (11) | −0.0060 (8) | −0.0058 (9) | 0.0004 (8) |
| C1 | 0.0147 (11) | 0.0203 (13) | 0.0179 (13) | 0.0004 (9) | −0.0025 (10) | 0.0014 (10) |
| C2 | 0.0134 (11) | 0.0186 (12) | 0.0156 (12) | −0.0010 (9) | −0.0018 (9) | −0.0023 (10) |
| C3 | 0.0171 (12) | 0.0212 (12) | 0.0193 (13) | 0.0016 (10) | −0.0011 (10) | −0.0041 (10) |
| C4 | 0.0216 (12) | 0.0161 (12) | 0.0222 (14) | 0.0019 (10) | −0.0024 (10) | 0.0025 (10) |
| C5 | 0.0223 (12) | 0.0196 (12) | 0.0157 (13) | −0.0010 (10) | −0.0006 (10) | 0.0031 (10) |
| C6 | 0.0158 (11) | 0.0210 (12) | 0.0132 (12) | −0.0004 (9) | −0.0023 (9) | 0.0009 (10) |
| C7 | 0.0198 (12) | 0.0180 (12) | 0.0151 (13) | −0.0005 (10) | −0.0031 (10) | −0.0018 (10) |
| C8 | 0.0167 (12) | 0.0224 (13) | 0.0161 (13) | 0.0019 (10) | −0.0001 (10) | 0.0005 (10) |
| C9 | 0.0150 (11) | 0.0202 (12) | 0.0141 (12) | 0.0024 (9) | −0.0002 (9) | −0.0019 (10) |
| C10 | 0.0179 (11) | 0.0189 (12) | 0.0179 (13) | −0.0011 (10) | −0.0038 (10) | −0.0041 (10) |
| C11 | 0.0207 (12) | 0.0159 (12) | 0.0266 (15) | −0.0006 (10) | 0.0019 (11) | −0.0027 (10) |
| C12 | 0.0177 (12) | 0.0196 (13) | 0.0183 (13) | 0.0016 (10) | 0.0000 (10) | 0.0049 (10) |
| C13 | 0.0160 (11) | 0.0207 (12) | 0.0125 (12) | −0.0010 (9) | 0.0016 (9) | 0.0020 (10) |
| C14 | 0.0157 (11) | 0.0239 (13) | 0.0138 (13) | −0.0011 (10) | 0.0011 (9) | 0.0008 (10) |
| C15 | 0.0244 (13) | 0.0207 (13) | 0.0199 (14) | −0.0019 (10) | 0.0003 (11) | −0.0021 (11) |
| C16 | 0.0232 (13) | 0.0267 (14) | 0.0169 (13) | 0.0012 (11) | 0.0013 (10) | 0.0003 (11) |
| C17 | 0.0310 (14) | 0.0219 (13) | 0.0205 (14) | 0.0026 (11) | −0.0012 (11) | −0.0036 (11) |
| C18 | 0.0192 (12) | 0.0227 (13) | 0.0198 (13) | 0.0002 (10) | 0.0001 (10) | 0.0002 (10) |
Geometric parameters (Å, °) top
| Ni1—N2 | 1.9575 (19) | N4—C17 | 1.492 (3) |
| Ni1—N1 | 1.9626 (19) | N4—H4B | 0.9000 |
| Ni1—O8 | 2.1320 (16) | N4—H4A | 0.9000 |
| Ni1—O5 | 2.1340 (16) | C1—C2 | 1.514 (3) |
| Ni1—O4 | 2.1400 (16) | C2—C3 | 1.386 (3) |
| Ni1—O1 | 2.1429 (16) | C3—C4 | 1.387 (3) |
| O1—C1 | 1.263 (3) | C3—H3 | 0.9500 |
| O2—C1 | 1.259 (3) | C4—C5 | 1.385 (3) |
| O3—C7 | 1.257 (3) | C4—H4 | 0.9500 |
| O4—C7 | 1.265 (3) | C5—C6 | 1.380 (3) |
| O5—C8 | 1.272 (3) | C5—H5 | 0.9500 |
| O6—C8 | 1.242 (3) | C6—C7 | 1.513 (3) |
| O7—C14 | 1.230 (3) | C8—C9 | 1.518 (3) |
| O8—C14 | 1.282 (3) | C9—C10 | 1.381 (3) |
| O9—H9B | 0.9500 | C10—C11 | 1.382 (3) |
| O9—H9A | 0.9501 | C10—H10 | 0.9500 |
| O10—H10A | 0.9501 | C11—C12 | 1.388 (3) |
| O10—H10B | 0.9499 | C11—H11 | 0.9500 |
| O11—H11A | 0.9500 | C12—C13 | 1.385 (3) |
| O11—H11B | 0.9501 | C12—H12 | 0.9500 |
| O12—H12B | 0.9500 | C13—C14 | 1.523 (3) |
| O12—H12A | 0.9499 | C15—C18 | 1.512 (3) |
| N1—C2 | 1.331 (3) | C15—H15A | 0.9900 |
| N1—C6 | 1.336 (3) | C15—H15B | 0.9900 |
| N2—C9 | 1.331 (3) | C16—C17 | 1.503 (3) |
| N2—C13 | 1.336 (3) | C16—H16A | 0.9900 |
| N3—C15 | 1.481 (3) | C16—H16B | 0.9900 |
| N3—C16 | 1.493 (3) | C17—H17A | 0.9900 |
| N3—H3B | 0.9001 | C17—H17B | 0.9900 |
| N3—H3A | 0.9000 | C18—H18A | 0.9900 |
| N4—C18 | 1.487 (3) | C18—H18B | 0.9900 |
| | | |
| N2—Ni1—N1 | 172.66 (8) | C6—C5—H5 | 120.6 |
| N2—Ni1—O8 | 77.97 (7) | C4—C5—H5 | 120.6 |
| N1—Ni1—O8 | 109.14 (7) | N1—C6—C5 | 120.3 (2) |
| N2—Ni1—O5 | 78.45 (7) | N1—C6—C7 | 112.8 (2) |
| N1—Ni1—O5 | 94.50 (7) | C5—C6—C7 | 126.9 (2) |
| O8—Ni1—O5 | 156.31 (6) | O3—C7—O4 | 125.1 (2) |
| N2—Ni1—O4 | 99.22 (7) | O3—C7—C6 | 118.6 (2) |
| N1—Ni1—O4 | 78.25 (7) | O4—C7—C6 | 116.3 (2) |
| O8—Ni1—O4 | 98.16 (6) | O6—C8—O5 | 126.3 (2) |
| O5—Ni1—O4 | 87.82 (6) | O6—C8—C9 | 118.4 (2) |
| N2—Ni1—O1 | 105.06 (7) | O5—C8—C9 | 115.3 (2) |
| N1—Ni1—O1 | 77.65 (7) | N2—C9—C10 | 120.9 (2) |
| O8—Ni1—O1 | 87.00 (6) | N2—C9—C8 | 113.3 (2) |
| O5—Ni1—O1 | 96.95 (6) | C10—C9—C8 | 125.7 (2) |
| O4—Ni1—O1 | 155.72 (6) | C9—C10—C11 | 118.3 (2) |
| C1—O1—Ni1 | 113.30 (14) | C9—C10—H10 | 120.9 |
| C7—O4—Ni1 | 112.92 (14) | C11—C10—H10 | 120.9 |
| C8—O5—Ni1 | 113.61 (14) | C10—C11—C12 | 120.4 (2) |
| C14—O8—Ni1 | 114.66 (14) | C10—C11—H11 | 119.8 |
| H9B—O9—H9A | 103.8 | C12—C11—H11 | 119.8 |
| H10A—O10—H10B | 102.3 | C13—C12—C11 | 118.2 (2) |
| H11A—O11—H11B | 103.3 | C13—C12—H12 | 120.9 |
| H12B—O12—H12A | 97.1 | C11—C12—H12 | 120.9 |
| C2—N1—C6 | 121.7 (2) | N2—C13—C12 | 120.5 (2) |
| C2—N1—Ni1 | 119.77 (15) | N2—C13—C14 | 112.8 (2) |
| C6—N1—Ni1 | 118.30 (15) | C12—C13—C14 | 126.7 (2) |
| C9—N2—C13 | 121.7 (2) | O7—C14—O8 | 127.0 (2) |
| C9—N2—Ni1 | 118.62 (15) | O7—C14—C13 | 118.4 (2) |
| C13—N2—Ni1 | 119.71 (15) | O8—C14—C13 | 114.6 (2) |
| C15—N3—C16 | 112.59 (18) | N3—C15—C18 | 110.69 (19) |
| C15—N3—H3B | 111.3 | N3—C15—H15A | 109.5 |
| C16—N3—H3B | 108.0 | C18—C15—H15A | 109.5 |
| C15—N3—H3A | 106.8 | N3—C15—H15B | 109.5 |
| C16—N3—H3A | 112.7 | C18—C15—H15B | 109.5 |
| H3B—N3—H3A | 105.2 | H15A—C15—H15B | 108.1 |
| C18—N4—C17 | 110.60 (18) | N3—C16—C17 | 109.8 (2) |
| C18—N4—H4B | 115.7 | N3—C16—H16A | 109.7 |
| C17—N4—H4B | 106.6 | C17—C16—H16A | 109.7 |
| C18—N4—H4A | 109.6 | N3—C16—H16B | 109.7 |
| C17—N4—H4A | 104.4 | C17—C16—H16B | 109.7 |
| H4B—N4—H4A | 109.2 | H16A—C16—H16B | 108.2 |
| O2—C1—O1 | 125.0 (2) | N4—C17—C16 | 110.2 (2) |
| O2—C1—C2 | 118.8 (2) | N4—C17—H17A | 109.6 |
| O1—C1—C2 | 116.1 (2) | C16—C17—H17A | 109.6 |
| N1—C2—C3 | 121.1 (2) | N4—C17—H17B | 109.6 |
| N1—C2—C1 | 111.8 (2) | C16—C17—H17B | 109.6 |
| C3—C2—C1 | 127.1 (2) | H17A—C17—H17B | 108.1 |
| C2—C3—C4 | 117.8 (2) | N4—C18—C15 | 109.97 (19) |
| C2—C3—H3 | 121.1 | N4—C18—H18A | 109.7 |
| C4—C3—H3 | 121.1 | C15—C18—H18A | 109.7 |
| C5—C4—C3 | 120.4 (2) | N4—C18—H18B | 109.7 |
| C5—C4—H4 | 119.8 | C15—C18—H18B | 109.7 |
| C3—C4—H4 | 119.8 | H18A—C18—H18B | 108.2 |
| C6—C5—C4 | 118.8 (2) | | |
| | | |
| N2—Ni1—O1—C1 | −178.68 (15) | O1—C1—C2—C3 | −167.5 (2) |
| N1—Ni1—O1—C1 | 8.35 (15) | N1—C2—C3—C4 | −1.1 (3) |
| O8—Ni1—O1—C1 | −101.99 (16) | C1—C2—C3—C4 | 177.8 (2) |
| O5—Ni1—O1—C1 | 101.46 (16) | C2—C3—C4—C5 | 0.5 (3) |
| O4—Ni1—O1—C1 | 1.3 (3) | C3—C4—C5—C6 | 0.6 (3) |
| N2—Ni1—O4—C7 | −162.01 (16) | C2—N1—C6—C5 | 0.7 (3) |
| N1—Ni1—O4—C7 | 10.98 (16) | Ni1—N1—C6—C5 | −173.99 (17) |
| O8—Ni1—O4—C7 | 118.95 (16) | C2—N1—C6—C7 | −177.69 (19) |
| O5—Ni1—O4—C7 | −84.08 (16) | Ni1—N1—C6—C7 | 7.6 (2) |
| O1—Ni1—O4—C7 | 18.0 (3) | C4—C5—C6—N1 | −1.3 (3) |
| N2—Ni1—O5—C8 | 7.61 (16) | C4—C5—C6—C7 | 176.9 (2) |
| N1—Ni1—O5—C8 | −170.29 (16) | Ni1—O4—C7—O3 | 170.98 (18) |
| O8—Ni1—O5—C8 | 13.2 (3) | Ni1—O4—C7—C6 | −10.2 (2) |
| O4—Ni1—O5—C8 | −92.26 (16) | N1—C6—C7—O3 | −178.59 (19) |
| O1—Ni1—O5—C8 | 111.63 (16) | C5—C6—C7—O3 | 3.1 (4) |
| N2—Ni1—O8—C14 | 4.62 (15) | N1—C6—C7—O4 | 2.5 (3) |
| N1—Ni1—O8—C14 | −177.30 (15) | C5—C6—C7—O4 | −175.8 (2) |
| O5—Ni1—O8—C14 | −1.0 (3) | Ni1—O5—C8—O6 | 172.99 (19) |
| O4—Ni1—O8—C14 | 102.37 (16) | Ni1—O5—C8—C9 | −8.2 (2) |
| O1—Ni1—O8—C14 | −101.48 (16) | C13—N2—C9—C10 | −0.4 (3) |
| N2—Ni1—N1—C2 | −114.2 (6) | Ni1—N2—C9—C10 | −179.45 (17) |
| O8—Ni1—N1—C2 | 80.63 (17) | C13—N2—C9—C8 | −177.99 (19) |
| O5—Ni1—N1—C2 | −97.89 (17) | Ni1—N2—C9—C8 | 2.9 (2) |
| O4—Ni1—N1—C2 | 175.29 (18) | O6—C8—C9—N2 | −177.1 (2) |
| O1—Ni1—N1—C2 | −1.75 (16) | O5—C8—C9—N2 | 3.9 (3) |
| N2—Ni1—N1—C6 | 60.6 (6) | O6—C8—C9—C10 | 5.4 (3) |
| O8—Ni1—N1—C6 | −104.56 (16) | O5—C8—C9—C10 | −173.5 (2) |
| O5—Ni1—N1—C6 | 76.92 (16) | N2—C9—C10—C11 | −0.7 (3) |
| O4—Ni1—N1—C6 | −9.90 (16) | C8—C9—C10—C11 | 176.6 (2) |
| O1—Ni1—N1—C6 | 173.06 (17) | C9—C10—C11—C12 | 0.7 (3) |
| N1—Ni1—N2—C9 | 11.2 (7) | C10—C11—C12—C13 | 0.3 (3) |
| O8—Ni1—N2—C9 | 176.82 (17) | C9—N2—C13—C12 | 1.5 (3) |
| O5—Ni1—N2—C9 | −5.48 (16) | Ni1—N2—C13—C12 | −179.48 (17) |
| O4—Ni1—N2—C9 | 80.37 (16) | C9—N2—C13—C14 | −179.07 (19) |
| O1—Ni1—N2—C9 | −99.65 (16) | Ni1—N2—C13—C14 | 0.0 (2) |
| N1—Ni1—N2—C13 | −167.9 (5) | C11—C12—C13—N2 | −1.4 (3) |
| O8—Ni1—N2—C13 | −2.27 (16) | C11—C12—C13—C14 | 179.2 (2) |
| O5—Ni1—N2—C13 | 175.44 (17) | Ni1—O8—C14—O7 | 174.76 (19) |
| O4—Ni1—N2—C13 | −98.72 (16) | Ni1—O8—C14—C13 | −5.8 (2) |
| O1—Ni1—N2—C13 | 81.26 (17) | N2—C13—C14—O7 | −176.5 (2) |
| Ni1—O1—C1—O2 | 167.25 (18) | C12—C13—C14—O7 | 3.0 (3) |
| Ni1—O1—C1—C2 | −12.8 (2) | N2—C13—C14—O8 | 4.1 (3) |
| C6—N1—C2—C3 | 0.5 (3) | C12—C13—C14—O8 | −176.5 (2) |
| Ni1—N1—C2—C3 | 175.12 (16) | C16—N3—C15—C18 | −55.1 (3) |
| C6—N1—C2—C1 | −178.59 (19) | C15—N3—C16—C17 | 55.5 (3) |
| Ni1—N1—C2—C1 | −4.0 (2) | C18—N4—C17—C16 | 59.7 (2) |
| O2—C1—C2—N1 | −168.6 (2) | N3—C16—C17—N4 | −57.0 (3) |
| O1—C1—C2—N1 | 11.5 (3) | C17—N4—C18—C15 | −58.5 (2) |
| O2—C1—C2—C3 | 12.4 (3) | N3—C15—C18—N4 | 55.8 (3) |
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| O9—H9B···O5i | 0.95 | 1.87 | 2.819 (2) | 177 |
| O9—H9A···O2ii | 0.95 | 1.90 | 2.828 (2) | 166 |
| O10—H10A···O7 | 0.95 | 1.99 | 2.927 (2) | 167 |
| O10—H10B···O9 | 0.95 | 1.90 | 2.846 (3) | 173 |
| O11—H11A···O6iii | 0.95 | 2.30 | 2.903 (2) | 120 |
| O11—H11A···O10iv | 0.95 | 2.37 | 3.124 (2) | 136 |
| O11—H11B···O3 | 0.95 | 1.88 | 2.834 (2) | 177 |
| O12—H12B···O8v | 0.95 | 1.83 | 2.781 (2) | 177 |
| O12—H12A···O11 | 0.95 | 1.92 | 2.844 (2) | 164 |
| N3—H3B···O2vi | 0.90 | 1.86 | 2.763 (3) | 176 |
| N3—H3B···O1vi | 0.90 | 2.58 | 3.161 (3) | 123 |
| N3—H3A···O12 | 0.90 | 1.92 | 2.696 (2) | 144 |
| N4—H4B···O6vii | 0.90 | 1.86 | 2.754 (2) | 170 |
| N4—H4A···O3iii | 0.90 | 1.90 | 2.792 (3) | 169 |
| C15—H15A···O1vi | 0.99 | 2.58 | 3.204 (3) | 121 |
| C16—H16B···O10iv | 0.99 | 2.57 | 3.457 (3) | 149 |
| C17—H17B···O7iv | 0.99 | 2.39 | 3.184 (3) | 137 |
| C18—H18B···O11viii | 0.99 | 2.50 | 3.270 (3) | 135 |
| Symmetry codes: (i) x−1/2, −y+3/2, z−1/2; (ii) −x+1/2, y+1/2, −z−1/2; (iii) −x+1/2, y−1/2, −z+1/2; (iv) x+1/2, −y+3/2, z+1/2; (v) −x, −y+1, −z; (vi) −x+1, −y+1, −z; (vii) −x+3/2, y−1/2, −z+1/2; (viii) x+1, y, z. |
Table 1
Selected geometric parameters (Å, °) top| Ni1—N2 | 1.9575 (19) | Ni1—O5 | 2.1340 (16) |
| Ni1—N1 | 1.9626 (19) | Ni1—O4 | 2.1400 (16) |
| Ni1—O8 | 2.1320 (16) | Ni1—O1 | 2.1429 (16) |
| | | |
| N2—Ni1—N1 | 172.66 (8) | O8—Ni1—O1 | 87.00 (6) |
| O8—Ni1—O5 | 156.31 (6) | O4—Ni1—O1 | 155.72 (6) |
| O5—Ni1—O4 | 87.82 (6) | | |
| | | |
| O5—Ni1—O4—C7 | −84.08 (16) | O4—Ni1—O5—C8 | −92.26 (16) |
Table 2
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| O9—H9B···O5i | 0.95 | 1.87 | 2.819 (2) | 177 |
| O9—H9A···O2ii | 0.95 | 1.90 | 2.828 (2) | 166 |
| O10—H10A···O7 | 0.95 | 1.99 | 2.927 (2) | 167 |
| O10—H10B···O9 | 0.95 | 1.90 | 2.846 (3) | 173 |
| O11—H11A···O6iii | 0.95 | 2.30 | 2.903 (2) | 120 |
| O11—H11A···O10iv | 0.95 | 2.37 | 3.124 (2) | 136 |
| O11—H11B···O3 | 0.95 | 1.88 | 2.834 (2) | 177 |
| O12—H12B···O8v | 0.95 | 1.83 | 2.781 (2) | 177 |
| O12—H12A···O11 | 0.95 | 1.92 | 2.844 (2) | 164 |
| N3—H3B···O2vi | 0.90 | 1.86 | 2.763 (3) | 176 |
| N3—H3B···O1vi | 0.90 | 2.58 | 3.161 (3) | 123 |
| N3—H3A···O12 | 0.90 | 1.92 | 2.696 (2) | 144 |
| N4—H4B···O6vii | 0.90 | 1.86 | 2.754 (2) | 170 |
| N4—H4A···O3iii | 0.90 | 1.90 | 2.792 (3) | 169 |
| C15—H15A···O1vi | 0.99 | 2.58 | 3.204 (3) | 121 |
| C16—H16B···O10iv | 0.99 | 2.57 | 3.457 (3) | 149 |
| C17—H17B···O7iv | 0.99 | 2.39 | 3.184 (3) | 137 |
| C18—H18B···O11viii | 0.99 | 2.50 | 3.270 (3) | 135 |
| Symmetry codes: (i) x−1/2, −y+3/2, z−1/2; (ii) −x+1/2, y+1/2, −z−1/2; (iii) −x+1/2, y−1/2, −z+1/2; (iv) x+1/2, −y+3/2, z+1/2; (v) −x, −y+1, −z; (vi) −x+1, −y+1, −z; (vii) −x+3/2, y−1/2, −z+1/2; (viii) x+1, y, z. |
Financial support by the Ilam University and Teacher Training University is
gratefully acknowledged by the authors.
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The intermolecular binding forces in supramolecular systems may consist of ion pairing, hydrogen bonding, hydrophobic or hydrophilic, host guest, π-π stacking and donor-acceptor interactions. In order to develop new types of proton transfer compounds and hydrogen bonding systems, our research group has recently focused on one-pot synthesis of water soluble self-assembly systems that can function as suitable ligands in the synthesis of metal complexes.
Here, we report on the synthesis and X-ray crystal structure of the title compound, (I). The selected bond lengths, bond and torsion angles are given in Table 1 which are within normal ranges (Allen et al., 1987). Accordingto the crystal structure of (I), the NiII compound is composed of an anionic complex, [Ni(pydc)2]2–, piperazinediium as counter-ion, (pipzH2)2+, and four uncoordinated water molecules. Atoms N1 and N2 of the two (pydc)2– fragments occupy the axial positions, while atoms O1, O4, O5 and O8 form the equatorial plane. The N1—Ni1—N2 angle deviates slightly from linearity [172.66 (8)°]. Therefore, the coordination around NiII is distorted octahedral.
The O1—Ni1—O8 and O4—Ni1—O5 angles are equal to 87.00 (6) and 87.82 (6)°, respectively. On the other hand, O4—Ni1—O5—C8 and O5—Ni1—O4—C7 torsion angles are -92.26 (16)° and -84.08 (16)°, respectively indicating that two (pydc)2– units are almost perpendicular to each other (Table 1). Considerable π-π stacking interactions between two aromatic rings of (pydc)2–, with distances of 3.4686 (14) Å and 3.5034 (14) Å are observed (Fig. 2) (Aghabozorg, Aghajani & Sharif, 2006; Aghabozorg, Zabihi et al., 2006). In the crystal structure, the spaces between two layers of [Ni(pydc)2]2– fragments are filled with layers of (pipzH2)2+ cations and water molecules (Fig. 3). The most important features of the crystal structure of (I) is the presence of a large number of O—H···O, N—H···O and C—H···O hydrogen bonds, with D···A distances ranging from 2.696 (3) to 3.457 (3) Å between (pipzH2)2+ and [Ni(pydc)2]2– fragments and uncoordinated water molecules. (Table 2). Ion pairing and van der Waals interactions are also effective in the packing. These interactions result in the formation of a supramolecular structure (Fig. 4).