supplementary materials
catena-Poly[[[aqua(pyrazino[2,3-f][1,10]phenanthroline)copper(II)]-
-benzene-1,3-dicarboxylato] N,N-dimethylacetamide monohydrate]
In the title compound, [Cu(C8H4O4)(C14H8N4)(H2O)]·C4H9NO·H2O, the CuII atom is five-coordinated by three O atoms from two benzene-1,3-dicarboxylate (1,3-bdc) ligands and one water molecule, and two N atoms from one chelating pyrazino[2,3-f][1,10]phenanthroline (L) ligand in a distorted square-pyramidal geometry. The CuII atoms are bridged by the 1,3-bdc ligands to form a one-dimensional helical chain structure. A network of O-H
O hydrogen bonds completes the structure. There are two half-molecules of 1,3-bdc in the asymmetric unit; both complete molecules are generated by twofold rotation symmetry, with two C atoms lying on the rotation axis in each case.
The L ligand was synthesized according to the literature method (Dickeson
& Summers, 1970). A N,N-dimethylacetamide solution (15 ml) of
L (121 mg, 0.5 mmol) was mixed with an aqueous solution (6 ml) of
ClCl2.2H2O (86 mg, 0.5 mmol) with stirring at 385 K. Then the 1,3-bdcH2
was added to the mixture with stirring. The resulting solution was filtered,
the filtrate was allowed to stand in air at room temperature for two weeks,
and blue crystals of (I) were obtained (yield 29% based on Cu).
All H atoms on C atoms were positioned geometrically (C—H = 0.93 Å) and
refined as riding, with Uiso(H)=1.2Ueq(carrier). The water
H-atoms were located in a difference Fourier map, and were refined with
distance restraints of O–H = 0.85 (1) Å; Uiso was allowed to refine
freely.
Data collection: PROCESS-AUTO (Rigaku, 1998); cell refinement: PROCESS-AUTO; data reduction: PROCESS-AUTO; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL-Plus (Sheldrick, 1990); software used to prepare material for publication: SHELXL97.
catena-Poly[[[aqua(pyrazino[2,3-
f][1,10]phenanthroline)copper(II)]-µ- benzene-1,3-dicarboxylato]
N,
N-dimethylacetamide
monohydrate]
top
Crystal data top
| [Cu(C8H4O4)(C14H8N4)(H2O)]·C4H9NO·H2O | F(000) = 1204 |
| Mr = 583.05 | Dx = 1.516 Mg m−3 |
| Monoclinic, P2/c | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2yc | Cell parameters from 17473 reflections |
| a = 14.829 (3) Å | θ = 3.2–27.5° |
| b = 7.2111 (14) Å | µ = 0.91 mm−1 |
| c = 23.976 (5) Å | T = 293 K |
| β = 95.00 (3)° | Block, blue |
| V = 2554.1 (9) Å3 | 0.33 × 0.31 × 0.30 mm |
| Z = 4 | |
Data collection top
Rigaku R-AXIS RAPID diffractometer | 5813 independent reflections |
| Radiation source: rotating anode | 4102 reflections with I > 2σ(I) |
| graphite | Rint = 0.061 |
| Detector resolution: 10.0 pixels mm-1 | θmax = 27.5°, θmin = 3.1° |
| ω scans | h = −19→18 |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | k = −9→9 |
| Tmin = 0.733, Tmax = 0.766 | l = −31→31 |
| 23862 measured reflections | |
Refinement top
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.068 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.184 | H atoms treated by a mixture of independent and constrained refinement |
| S = 1.07 | w = 1/[σ2(Fo2) + (0.0676P)2 + 7.6293P] where P = (Fo2 + 2Fc2)/3 |
| 5813 reflections | (Δ/σ)max < 0.001 |
| 373 parameters | Δρmax = 1.09 e Å−3 |
| 7 restraints | Δρmin = −0.43 e Å−3 |
Crystal data top
| [Cu(C8H4O4)(C14H8N4)(H2O)]·C4H9NO·H2O | V = 2554.1 (9) Å3 |
| Mr = 583.05 | Z = 4 |
| Monoclinic, P2/c | Mo Kα radiation |
| a = 14.829 (3) Å | µ = 0.91 mm−1 |
| b = 7.2111 (14) Å | T = 293 K |
| c = 23.976 (5) Å | 0.33 × 0.31 × 0.30 mm |
| β = 95.00 (3)° | |
Data collection top
Rigaku R-AXIS RAPID diffractometer | 5813 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 4102 reflections with I > 2σ(I) |
| Tmin = 0.733, Tmax = 0.766 | Rint = 0.061 |
| 23862 measured reflections | θmax = 27.5° |
Refinement top
| R[F2 > 2σ(F2)] = 0.068 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.184 | Δρmax = 1.09 e Å−3 |
| S = 1.07 | Δρmin = −0.43 e Å−3 |
| 5813 reflections | Absolute structure: ? |
| 373 parameters | Flack parameter: ? |
| 7 restraints | Rogers parameter: ? |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top| | x | y | z | Uiso*/Ueq | |
| C1 | 0.4129 (3) | 0.2052 (8) | 0.5417 (2) | 0.0440 (12) | |
| H1 | 0.4376 | 0.1590 | 0.5759 | 0.053* | |
| C2 | 0.4719 (3) | 0.2530 (8) | 0.5017 (2) | 0.0497 (13) | |
| H2 | 0.5342 | 0.2429 | 0.5097 | 0.060* | |
| C3 | 0.4370 (3) | 0.3140 (7) | 0.4510 (2) | 0.0440 (11) | |
| H3 | 0.4752 | 0.3432 | 0.4235 | 0.053* | |
| C4 | 0.3426 (3) | 0.3333 (6) | 0.43985 (18) | 0.0357 (10) | |
| C5 | 0.2887 (3) | 0.2852 (6) | 0.48253 (17) | 0.0314 (9) | |
| C6 | 0.1916 (3) | 0.2943 (6) | 0.47436 (17) | 0.0297 (9) | |
| C7 | 0.0563 (3) | 0.2370 (7) | 0.5113 (2) | 0.0424 (11) | |
| H7 | 0.0246 | 0.1983 | 0.5411 | 0.051* | |
| C8 | 0.0072 (3) | 0.2930 (8) | 0.4617 (2) | 0.0475 (12) | |
| H8 | −0.0558 | 0.2909 | 0.4587 | 0.057* | |
| C9 | 0.0525 (3) | 0.3505 (7) | 0.4178 (2) | 0.0422 (11) | |
| H9 | 0.0208 | 0.3879 | 0.3845 | 0.051* | |
| C10 | 0.1472 (3) | 0.3528 (6) | 0.42319 (18) | 0.0339 (9) | |
| C11 | 0.2981 (3) | 0.3891 (6) | 0.38611 (18) | 0.0376 (10) | |
| C12 | 0.2044 (3) | 0.4006 (6) | 0.37806 (17) | 0.0346 (10) | |
| C13 | 0.2132 (4) | 0.4844 (7) | 0.2878 (2) | 0.0522 (14) | |
| H13 | 0.1863 | 0.5186 | 0.2528 | 0.063* | |
| C14 | 0.3063 (5) | 0.4713 (8) | 0.2957 (2) | 0.0570 (15) | |
| H14 | 0.3395 | 0.4941 | 0.2652 | 0.068* | |
| C15 | 0.3677 (3) | 0.1853 (8) | 0.67698 (17) | 0.0414 (12) | |
| C16 | 0.4361 (3) | 0.0762 (7) | 0.71521 (17) | 0.0361 (10) | |
| C17 | 0.5000 | 0.1725 (9) | 0.7500 | 0.0340 (13) | |
| H17 | 0.5000 | 0.3015 | 0.7500 | 0.041* | |
| C18 | 0.4360 (3) | −0.1149 (8) | 0.7155 (2) | 0.0456 (12) | |
| H18 | 0.3931 | −0.1798 | 0.6925 | 0.055* | |
| C19 | 0.5000 | −0.2104 (12) | 0.7500 | 0.058 (2) | |
| H19 | 0.5000 | −0.3394 | 0.7500 | 0.070* | |
| C20 | 0.0931 (3) | 0.2029 (7) | 0.66650 (17) | 0.0352 (10) | |
| C21 | 0.0441 (3) | 0.0973 (6) | 0.70954 (16) | 0.0319 (9) | |
| C22 | 0.0000 | 0.1949 (9) | 0.7500 | 0.0318 (13) | |
| H22 | 0.0000 | 0.3239 | 0.7500 | 0.038* | |
| C23 | 0.0432 (3) | −0.0947 (7) | 0.71019 (19) | 0.0407 (11) | |
| H23 | 0.0721 | −0.1597 | 0.6834 | 0.049* | |
| C24 | 0.0000 | −0.1916 (10) | 0.7500 | 0.0461 (17) | |
| H24 | 0.0000 | −0.3206 | 0.7500 | 0.055* | |
| C25 | 0.2265 (4) | −0.0370 (9) | 0.3096 (2) | 0.0595 (16) | |
| H25A | 0.2479 | 0.0777 | 0.2953 | 0.089* | |
| H25B | 0.1640 | −0.0243 | 0.3165 | 0.089* | |
| H25C | 0.2326 | −0.1338 | 0.2827 | 0.089* | |
| C26 | 0.3805 (4) | −0.0846 (9) | 0.3637 (2) | 0.0552 (14) | |
| H26A | 0.3996 | −0.0077 | 0.3343 | 0.083* | |
| H26B | 0.4014 | −0.2091 | 0.3589 | 0.083* | |
| H26C | 0.4055 | −0.0376 | 0.3992 | 0.083* | |
| C27 | 0.2456 (5) | −0.1394 (8) | 0.4071 (3) | 0.0586 (15) | |
| C28 | 0.1422 (3) | −0.1422 (8) | 0.4065 (3) | 0.0530 (13) | |
| H28A | 0.1174 | −0.2215 | 0.3768 | 0.080* | |
| H28B | 0.1191 | −0.0188 | 0.4005 | 0.080* | |
| H28C | 0.1253 | −0.1880 | 0.4417 | 0.080* | |
| N1 | 0.1455 (2) | 0.2367 (5) | 0.51787 (14) | 0.0328 (8) | |
| N2 | 0.3234 (2) | 0.2223 (6) | 0.53358 (15) | 0.0347 (8) | |
| N3 | 0.3510 (3) | 0.4285 (6) | 0.34392 (18) | 0.0497 (11) | |
| N4 | 0.1615 (3) | 0.4498 (6) | 0.32826 (16) | 0.0465 (10) | |
| N5 | 0.2799 (3) | −0.0837 (7) | 0.36185 (19) | 0.0558 (12) | |
| O1 | 0.3691 (3) | 0.3545 (6) | 0.67766 (17) | 0.0612 (11) | |
| O2 | 0.3140 (2) | 0.0834 (6) | 0.64574 (14) | 0.0533 (10) | |
| O1W | 0.2181 (3) | −0.1484 (5) | 0.55112 (14) | 0.0475 (9) | |
| HW11 | 0.241 (4) | −0.181 (7) | 0.5213 (13) | 0.064 (19)* | |
| HW12 | 0.234 (3) | −0.239 (5) | 0.5731 (15) | 0.044 (15)* | |
| O3 | 0.1262 (2) | 0.1001 (6) | 0.63021 (13) | 0.0490 (9) | |
| O2W | 0.2320 (3) | 0.5306 (7) | 0.61437 (18) | 0.0654 (12) | |
| HW21 | 0.186 (3) | 0.510 (12) | 0.632 (3) | 0.11 (3)* | |
| HW22 | 0.276 (3) | 0.545 (7) | 0.640 (3) | 0.14 (4)* | |
| O4 | 0.0964 (3) | 0.3738 (5) | 0.66852 (15) | 0.0518 (9) | |
| O5 | 0.2951 (3) | −0.1872 (6) | 0.45047 (14) | 0.0563 (10) | |
| Cu1 | 0.22665 (4) | 0.15296 (9) | 0.58553 (2) | 0.03622 (19) | |
Atomic displacement parameters (Å2) top| | U11 | U22 | U33 | U12 | U13 | U23 |
| C1 | 0.035 (2) | 0.057 (3) | 0.039 (2) | 0.001 (2) | −0.004 (2) | 0.000 (2) |
| C2 | 0.031 (2) | 0.066 (4) | 0.052 (3) | −0.003 (2) | 0.003 (2) | −0.001 (3) |
| C3 | 0.042 (3) | 0.046 (3) | 0.046 (3) | −0.007 (2) | 0.016 (2) | 0.001 (2) |
| C4 | 0.038 (2) | 0.035 (2) | 0.034 (2) | −0.005 (2) | 0.0055 (18) | −0.0019 (19) |
| C5 | 0.033 (2) | 0.033 (2) | 0.029 (2) | −0.0013 (18) | 0.0036 (17) | −0.0034 (17) |
| C6 | 0.035 (2) | 0.026 (2) | 0.0284 (19) | 0.0021 (17) | 0.0013 (17) | −0.0028 (16) |
| C7 | 0.034 (2) | 0.054 (3) | 0.040 (2) | 0.000 (2) | 0.006 (2) | 0.005 (2) |
| C8 | 0.027 (2) | 0.062 (3) | 0.053 (3) | 0.003 (2) | 0.000 (2) | 0.002 (3) |
| C9 | 0.041 (2) | 0.044 (3) | 0.039 (2) | 0.007 (2) | −0.006 (2) | −0.001 (2) |
| C10 | 0.041 (2) | 0.030 (2) | 0.031 (2) | 0.0021 (19) | −0.0005 (18) | −0.0013 (18) |
| C11 | 0.050 (3) | 0.032 (2) | 0.031 (2) | −0.002 (2) | 0.010 (2) | 0.0023 (18) |
| C12 | 0.047 (3) | 0.029 (2) | 0.028 (2) | 0.0007 (19) | 0.0039 (18) | 0.0008 (17) |
| C13 | 0.082 (4) | 0.044 (3) | 0.029 (2) | 0.007 (3) | 0.002 (2) | 0.010 (2) |
| C14 | 0.090 (5) | 0.045 (3) | 0.039 (3) | 0.005 (3) | 0.023 (3) | 0.009 (2) |
| C15 | 0.038 (2) | 0.065 (4) | 0.0213 (19) | 0.000 (2) | 0.0000 (18) | 0.001 (2) |
| C16 | 0.032 (2) | 0.050 (3) | 0.026 (2) | −0.002 (2) | 0.0028 (17) | −0.0013 (19) |
| C17 | 0.035 (3) | 0.042 (4) | 0.026 (3) | 0.000 | 0.005 (2) | 0.000 |
| C18 | 0.041 (3) | 0.052 (3) | 0.042 (3) | −0.008 (2) | −0.007 (2) | −0.006 (2) |
| C19 | 0.049 (4) | 0.053 (5) | 0.071 (5) | 0.000 | −0.004 (4) | 0.000 |
| C20 | 0.031 (2) | 0.050 (3) | 0.0251 (19) | 0.002 (2) | 0.0021 (17) | −0.0001 (19) |
| C21 | 0.030 (2) | 0.043 (2) | 0.0222 (18) | −0.0035 (18) | 0.0014 (16) | −0.0005 (17) |
| C22 | 0.033 (3) | 0.040 (3) | 0.023 (3) | 0.000 | 0.002 (2) | 0.000 |
| C23 | 0.047 (3) | 0.044 (3) | 0.032 (2) | 0.005 (2) | 0.008 (2) | −0.008 (2) |
| C24 | 0.062 (5) | 0.030 (4) | 0.047 (4) | 0.000 | 0.007 (3) | 0.000 |
| C25 | 0.080 (4) | 0.052 (3) | 0.044 (3) | 0.000 (3) | −0.014 (3) | 0.010 (3) |
| C26 | 0.044 (3) | 0.069 (4) | 0.055 (3) | −0.003 (3) | 0.017 (2) | −0.012 (3) |
| C27 | 0.073 (4) | 0.045 (3) | 0.061 (3) | −0.003 (3) | 0.017 (3) | −0.014 (3) |
| C28 | 0.037 (3) | 0.055 (3) | 0.068 (3) | 0.001 (2) | 0.010 (2) | −0.009 (3) |
| N1 | 0.0294 (18) | 0.040 (2) | 0.0293 (17) | 0.0012 (16) | 0.0047 (14) | −0.0005 (15) |
| N2 | 0.0292 (18) | 0.045 (2) | 0.0298 (17) | −0.0003 (16) | 0.0007 (14) | −0.0038 (16) |
| N3 | 0.059 (3) | 0.050 (3) | 0.042 (2) | 0.002 (2) | 0.016 (2) | 0.008 (2) |
| N4 | 0.060 (3) | 0.046 (2) | 0.033 (2) | 0.007 (2) | 0.0010 (19) | 0.0024 (18) |
| N5 | 0.060 (3) | 0.062 (3) | 0.046 (2) | 0.000 (2) | 0.004 (2) | 0.000 (2) |
| O1 | 0.065 (3) | 0.056 (3) | 0.059 (2) | 0.015 (2) | −0.018 (2) | −0.006 (2) |
| O2 | 0.052 (2) | 0.068 (3) | 0.0364 (17) | −0.0087 (19) | −0.0164 (16) | 0.0066 (17) |
| O1W | 0.060 (2) | 0.050 (2) | 0.0331 (17) | 0.0020 (18) | 0.0091 (16) | 0.0023 (16) |
| O3 | 0.050 (2) | 0.069 (2) | 0.0303 (16) | −0.0023 (18) | 0.0203 (15) | −0.0047 (16) |
| O2W | 0.061 (3) | 0.076 (3) | 0.060 (2) | −0.001 (2) | 0.008 (2) | 0.033 (2) |
| O4 | 0.059 (2) | 0.047 (2) | 0.052 (2) | −0.0009 (18) | 0.0232 (18) | 0.0075 (17) |
| O5 | 0.060 (2) | 0.075 (3) | 0.0345 (17) | 0.006 (2) | 0.0035 (16) | 0.0069 (18) |
| Cu1 | 0.0312 (3) | 0.0564 (4) | 0.0209 (2) | 0.0002 (3) | 0.00140 (19) | −0.0004 (2) |
Geometric parameters (Å, °) top
| C1—N2 | 1.331 (6) | C18—H18 | 0.9300 |
| C1—C2 | 1.397 (7) | C19—C18i | 1.387 (7) |
| C1—H1 | 0.9300 | C19—H19 | 0.9300 |
| C2—C3 | 1.351 (7) | C20—O4 | 1.234 (6) |
| C2—H2 | 0.9300 | C20—O3 | 1.274 (6) |
| C3—C4 | 1.408 (7) | C20—C21 | 1.518 (6) |
| C3—H3 | 0.9300 | C21—C23 | 1.385 (7) |
| C4—C5 | 1.396 (6) | C21—C22 | 1.405 (5) |
| C4—C11 | 1.453 (6) | C22—C21ii | 1.405 (5) |
| C5—N2 | 1.363 (5) | C22—H22 | 0.9300 |
| C5—C6 | 1.437 (6) | C23—C24 | 1.384 (6) |
| C6—N1 | 1.361 (5) | C23—H23 | 0.9300 |
| C6—C10 | 1.406 (6) | C24—C23ii | 1.384 (6) |
| C7—N1 | 1.318 (6) | C24—H24 | 0.9300 |
| C7—C8 | 1.400 (7) | C25—N5 | 1.462 (7) |
| C7—H7 | 0.9300 | C25—H25A | 0.9600 |
| C8—C9 | 1.362 (7) | C25—H25B | 0.9600 |
| C8—H8 | 0.9300 | C25—H25C | 0.9600 |
| C9—C10 | 1.399 (7) | C26—N5 | 1.489 (7) |
| C9—H9 | 0.9300 | C26—H26A | 0.9600 |
| C10—C12 | 1.473 (6) | C26—H26B | 0.9600 |
| C11—N3 | 1.363 (6) | C26—H26C | 0.9600 |
| C11—C12 | 1.388 (7) | C27—O5 | 1.267 (7) |
| C12—N4 | 1.351 (6) | C27—N5 | 1.302 (7) |
| C13—N4 | 1.311 (7) | C27—C28 | 1.531 (8) |
| C13—C14 | 1.381 (9) | C28—H28A | 0.9600 |
| C13—H13 | 0.9300 | C28—H28B | 0.9600 |
| C14—N3 | 1.318 (7) | C28—H28C | 0.9600 |
| C14—H14 | 0.9300 | Cu1—N1 | 2.026 (4) |
| C15—O1 | 1.221 (7) | Cu1—N2 | 2.043 (4) |
| C15—O2 | 1.277 (6) | Cu1—O2 | 1.920 (3) |
| C15—C16 | 1.525 (7) | Cu1—O3 | 1.947 (3) |
| C16—C18 | 1.378 (7) | Cu1—O1W | 2.324 (4) |
| C16—C17 | 1.392 (6) | O1W—HW11 | 0.85 (4) |
| C17—C16i | 1.392 (6) | O1W—HW12 | 0.86 (4) |
| C17—H17 | 0.9300 | O2W—HW21 | 0.85 (5) |
| C18—C19 | 1.387 (7) | O2W—HW22 | 0.86 (6) |
| | | |
| N2—C1—C2 | 123.5 (5) | C23—C21—C22 | 119.2 (4) |
| N2—C1—H1 | 118.3 | C23—C21—C20 | 121.0 (4) |
| C2—C1—H1 | 118.3 | C22—C21—C20 | 119.8 (4) |
| C3—C2—C1 | 119.0 (5) | C21—C22—C21ii | 119.9 (6) |
| C3—C2—H2 | 120.5 | C21—C22—H22 | 120.1 |
| C1—C2—H2 | 120.5 | C21ii—C22—H22 | 120.1 |
| C2—C3—C4 | 119.9 (4) | C24—C23—C21 | 121.2 (5) |
| C2—C3—H3 | 120.0 | C24—C23—H23 | 119.4 |
| C4—C3—H3 | 120.0 | C21—C23—H23 | 119.4 |
| C5—C4—C3 | 117.3 (4) | C23ii—C24—C23 | 119.4 (6) |
| C5—C4—C11 | 118.3 (4) | C23ii—C24—H24 | 120.3 |
| C3—C4—C11 | 124.3 (4) | C23—C24—H24 | 120.3 |
| N2—C5—C4 | 123.0 (4) | N5—C25—H25A | 109.5 |
| N2—C5—C6 | 115.6 (4) | N5—C25—H25B | 109.5 |
| C4—C5—C6 | 121.3 (4) | H25A—C25—H25B | 109.5 |
| N1—C6—C10 | 122.2 (4) | N5—C25—H25C | 109.5 |
| N1—C6—C5 | 116.5 (4) | H25A—C25—H25C | 109.5 |
| C10—C6—C5 | 121.3 (4) | H25B—C25—H25C | 109.5 |
| N1—C7—C8 | 123.0 (4) | N5—C26—H26A | 109.5 |
| N1—C7—H7 | 118.5 | N5—C26—H26B | 109.5 |
| C8—C7—H7 | 118.5 | H26A—C26—H26B | 109.5 |
| C9—C8—C7 | 119.3 (4) | N5—C26—H26C | 109.5 |
| C9—C8—H8 | 120.3 | H26A—C26—H26C | 109.5 |
| C7—C8—H8 | 120.3 | H26B—C26—H26C | 109.5 |
| C8—C9—C10 | 119.4 (4) | O5—C27—N5 | 121.8 (6) |
| C8—C9—H9 | 120.3 | O5—C27—C28 | 120.8 (5) |
| C10—C9—H9 | 120.3 | N5—C27—C28 | 117.3 (6) |
| C9—C10—C6 | 117.9 (4) | C27—C28—H28A | 109.5 |
| C9—C10—C12 | 124.9 (4) | C27—C28—H28B | 109.5 |
| C6—C10—C12 | 117.1 (4) | H28A—C28—H28B | 109.5 |
| N3—C11—C12 | 121.2 (4) | C27—C28—H28C | 109.5 |
| N3—C11—C4 | 118.0 (4) | H28A—C28—H28C | 109.5 |
| C12—C11—C4 | 120.8 (4) | H28B—C28—H28C | 109.5 |
| N4—C12—C11 | 121.8 (4) | C7—N1—C6 | 118.3 (4) |
| N4—C12—C10 | 117.0 (4) | C7—N1—Cu1 | 128.0 (3) |
| C11—C12—C10 | 121.1 (4) | C6—N1—Cu1 | 113.7 (3) |
| N4—C13—C14 | 121.8 (5) | C1—N2—C5 | 117.2 (4) |
| N4—C13—H13 | 119.1 | C1—N2—Cu1 | 129.2 (3) |
| C14—C13—H13 | 119.1 | C5—N2—Cu1 | 113.5 (3) |
| N3—C14—C13 | 123.8 (5) | C14—N3—C11 | 115.0 (5) |
| N3—C14—H14 | 118.1 | C13—N4—C12 | 116.3 (5) |
| C13—C14—H14 | 118.1 | C27—N5—C25 | 124.3 (6) |
| O1—C15—O2 | 126.3 (5) | C27—N5—C26 | 115.9 (5) |
| O1—C15—C16 | 119.9 (4) | C25—N5—C26 | 119.6 (5) |
| O2—C15—C16 | 113.8 (5) | C15—O2—Cu1 | 129.5 (4) |
| C18—C16—C17 | 119.8 (5) | Cu1—O1W—HW11 | 123 (4) |
| C18—C16—C15 | 121.2 (4) | Cu1—O1W—HW12 | 119 (3) |
| C17—C16—C15 | 119.0 (5) | HW11—O1W—HW12 | 101 (3) |
| C16—C17—C16i | 120.2 (6) | C20—O3—Cu1 | 128.4 (3) |
| C16—C17—H17 | 119.9 | HW21—O2W—HW22 | 105 (3) |
| C16i—C17—H17 | 119.9 | O2—Cu1—O3 | 91.92 (16) |
| C16—C18—C19 | 119.9 (5) | O2—Cu1—N1 | 174.00 (16) |
| C16—C18—H18 | 120.0 | O3—Cu1—N1 | 93.99 (15) |
| C19—C18—H18 | 120.0 | O2—Cu1—N2 | 93.37 (16) |
| C18i—C19—C18 | 120.4 (8) | O3—Cu1—N2 | 174.49 (15) |
| C18i—C19—H19 | 119.8 | N1—Cu1—N2 | 80.69 (14) |
| C18—C19—H19 | 119.8 | O2—Cu1—O1W | 92.00 (16) |
| O4—C20—O3 | 126.3 (4) | O3—Cu1—O1W | 89.51 (15) |
| O4—C20—C21 | 119.6 (4) | N1—Cu1—O1W | 89.09 (14) |
| O3—C20—C21 | 114.1 (4) | N2—Cu1—O1W | 91.83 (14) |
| | | |
| N2—C1—C2—C3 | −2.4 (9) | C22—C21—C23—C24 | −0.2 (6) |
| C1—C2—C3—C4 | 1.7 (8) | C20—C21—C23—C24 | 178.8 (3) |
| C2—C3—C4—C5 | −0.7 (7) | C21—C23—C24—C23ii | 0.1 (3) |
| C2—C3—C4—C11 | −177.0 (5) | C8—C7—N1—C6 | 0.3 (7) |
| C3—C4—C5—N2 | 0.2 (7) | C8—C7—N1—Cu1 | −177.9 (4) |
| C11—C4—C5—N2 | 176.7 (4) | C10—C6—N1—C7 | −0.2 (6) |
| C3—C4—C5—C6 | −177.9 (4) | C5—C6—N1—C7 | −177.8 (4) |
| C11—C4—C5—C6 | −1.4 (7) | C10—C6—N1—Cu1 | 178.2 (3) |
| N2—C5—C6—N1 | −1.0 (6) | C5—C6—N1—Cu1 | 0.7 (5) |
| C4—C5—C6—N1 | 177.2 (4) | C2—C1—N2—C5 | 1.9 (8) |
| N2—C5—C6—C10 | −178.6 (4) | C2—C1—N2—Cu1 | 177.8 (4) |
| C4—C5—C6—C10 | −0.3 (7) | C4—C5—N2—C1 | −0.8 (7) |
| N1—C7—C8—C9 | −0.1 (8) | C6—C5—N2—C1 | 177.4 (4) |
| C7—C8—C9—C10 | −0.1 (8) | C4—C5—N2—Cu1 | −177.4 (3) |
| C8—C9—C10—C6 | 0.2 (7) | C6—C5—N2—Cu1 | 0.8 (5) |
| C8—C9—C10—C12 | 176.0 (5) | C13—C14—N3—C11 | 2.7 (8) |
| N1—C6—C10—C9 | 0.0 (7) | C12—C11—N3—C14 | −2.1 (7) |
| C5—C6—C10—C9 | 177.4 (4) | C4—C11—N3—C14 | 177.5 (5) |
| N1—C6—C10—C12 | −176.2 (4) | C14—C13—N4—C12 | −0.1 (8) |
| C5—C6—C10—C12 | 1.2 (6) | C11—C12—N4—C13 | 0.6 (7) |
| C5—C4—C11—N3 | −177.4 (4) | C10—C12—N4—C13 | −177.2 (4) |
| C3—C4—C11—N3 | −1.2 (7) | O5—C27—N5—C25 | 176.3 (5) |
| C5—C4—C11—C12 | 2.2 (7) | C28—C27—N5—C25 | −4.6 (8) |
| C3—C4—C11—C12 | 178.4 (5) | O5—C27—N5—C26 | 1.5 (8) |
| N3—C11—C12—N4 | 0.5 (7) | C28—C27—N5—C26 | −179.4 (5) |
| C4—C11—C12—N4 | −179.1 (4) | O1—C15—O2—Cu1 | 6.5 (8) |
| N3—C11—C12—C10 | 178.2 (4) | C16—C15—O2—Cu1 | −172.2 (3) |
| C4—C11—C12—C10 | −1.3 (7) | O4—C20—O3—Cu1 | 25.4 (7) |
| C9—C10—C12—N4 | 1.6 (7) | C21—C20—O3—Cu1 | −156.0 (3) |
| C6—C10—C12—N4 | 177.5 (4) | C15—O2—Cu1—O3 | −107.8 (4) |
| C9—C10—C12—C11 | −176.2 (5) | C15—O2—Cu1—N2 | 70.6 (4) |
| C6—C10—C12—C11 | −0.4 (6) | C15—O2—Cu1—O1W | 162.6 (4) |
| N4—C13—C14—N3 | −1.8 (9) | C20—O3—Cu1—O2 | 82.1 (4) |
| O1—C15—C16—C18 | 179.8 (5) | C20—O3—Cu1—N1 | −96.8 (4) |
| O2—C15—C16—C18 | −1.4 (6) | C20—O3—Cu1—O1W | 174.1 (4) |
| O1—C15—C16—C17 | −0.7 (6) | C7—N1—Cu1—O3 | −3.4 (4) |
| O2—C15—C16—C17 | 178.0 (4) | C6—N1—Cu1—O3 | 178.4 (3) |
| C18—C16—C17—C16i | 0.3 (3) | C7—N1—Cu1—N2 | 178.1 (4) |
| C15—C16—C17—C16i | −179.2 (4) | C6—N1—Cu1—N2 | −0.2 (3) |
| C17—C16—C18—C19 | −0.5 (7) | C7—N1—Cu1—O1W | 86.1 (4) |
| C15—C16—C18—C19 | 178.9 (4) | C6—N1—Cu1—O1W | −92.2 (3) |
| C16—C18—C19—C18i | 0.3 (3) | C1—N2—Cu1—O2 | 4.4 (5) |
| O4—C20—C21—C23 | −176.6 (5) | C5—N2—Cu1—O2 | −179.4 (3) |
| O3—C20—C21—C23 | 4.6 (6) | C1—N2—Cu1—N1 | −176.4 (5) |
| O4—C20—C21—C22 | 2.4 (6) | C5—N2—Cu1—N1 | −0.3 (3) |
| O3—C20—C21—C22 | −176.4 (3) | C1—N2—Cu1—O1W | −87.7 (4) |
| C23—C21—C22—C21ii | 0.1 (3) | C5—N2—Cu1—O1W | 88.4 (3) |
| C20—C21—C22—C21ii | −178.9 (4) | | |
| Symmetry codes: (i) −x+1, y, −z+3/2; (ii) −x, y, −z+3/2. |
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1W—HW12···O2Wiii | 0.86 (4) | 1.93 (2) | 2.765 (6) | 162 (5) |
| O1W—HW11···O5 | 0.85 (4) | 1.94 (2) | 2.772 (5) | 165 (5) |
| O2W—HW22···O1 | 0.86 (6) | 2.10 (4) | 2.740 (6) | 131 (4) |
| O2W—HW21···O4 | 0.85 (4) | 1.92 (4) | 2.732 (6) | 159 (9) |
| Symmetry codes: (iii) x, y−1, z. |
Table 1
Selected geometric parameters (Å) top| Cu1—N1 | 2.026 (4) | Cu1—O3 | 1.947 (3) |
| Cu1—N2 | 2.043 (4) | Cu1—O1W | 2.324 (4) |
| Cu1—O2 | 1.920 (3) | | |
Table 2
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1W—HW12···O2Wi | 0.86 (4) | 1.93 (2) | 2.765 (6) | 162 (5) |
| O1W—HW11···O5 | 0.85 (4) | 1.94 (2) | 2.772 (5) | 165 (5) |
| O2W—HW22···O1 | 0.86 (6) | 2.10 (4) | 2.740 (6) | 131 (4) |
| O2W—HW21···O4 | 0.85 (4) | 1.92 (4) | 2.732 (6) | 159 (9) |
| Symmetry codes: (i) x, y−1, z. |
The author thanks Qiqihar University for supporting this work.
Cai, J.-H., Huang, Y.-H., Jiang, Y.-M. & Ng, S. W. (2006). Acta Cryst. E62, m2823–m2825.
Dickeson, J. E. & Summers, L. A. (1970). Aust. J. Chem. 23, 1023–1027.
Higashi, T. (1995). ABSCOR. Rigaku Corporation, Tokyo, Japan.
Ren, B.-D. & Zhao, Y.-J. (2006). Acta Cryst. E62, m170–m171.
Rigaku (1998). PROCESS-AUTO. Automatic Data Acquisition and Processing Package for Imaging Plate Diffractometer. Rigaku Corporation, Tokyo, Japan.
Sheldrick, G. M. (1990). SHELXTL-Plus, Structure Determination Program, Siemens Analytical X-Ray Instrument Inc., Madison, WI, USA.
Sheldrick, G. M. (1997). SHELXS97 and SHELXL97. University of Göttingen, Germany.
Yang, Y., Meng, F.-Y., Zeng, M.-H. & Ng, S. W. (2005). Acta Cryst. E61, m986–m988.
Zhang, Y.-M., Hou, D.-Y., Xin, G. & Li, T.-C. (2007). Acta Cryst. E63, m1363–m1364.
Recently, helical structures have received intense interest in coordination chemistry (Cai et al., 2006). It is well known that a bidentate organic acid ligand may be useful in the formation of helical chains in the presence of 2,2'-bipyridine (bipy) or 1,10-phenanthroline (phen). The N atoms from the bipy or phen ligand may occupy two coordination positions of central metals (Ren & Zhao, 2006). The additional coordination positions are available for the bidentate carboxylate ligands, leading to the formation of a helix (Yang et al., 2005).
We therefore selected benzene-1,3-dicarboxylic acid (1,3-bdcH2) as a bridging ligand and pyrazino[2,3-f][1,10]phenanthroline (L) as a secondary ligand, forming a the title compound, (I), a new helical Cu(II) coordination polymer, [Cu(1,3-bdc)(L)(H2O].DMA.H2O (DMA = N,N-dimethylacetamide), which is reported here.
Selected bond lengths and angles for (I) are given in Table 1. In (I) each CuII atom is five-coordinated by three O atoms from two monodentate 1,3-bdc ligands and one water molecule, and two N atoms from one chelating L ligand in a distorted square-pyramidal coordination sphere (Fig. 1). Two carboxylate O atoms (O2, O3) and two N atoms (N1, N2) form the equatorial plane, whereas the water molecule occupies the axial position with Cu1—O1w distance of 2.324 (4) Å.
The 1,3-bdc ligands linked the CuII atoms to form a one-dimensional helical chain structure (Fig. 2). The helical chain is decorated with L ligands, alternately at each side. Finally, O—H···O H-bonds complete the structure of (I) (Table 2).