supplementary materials


Acta Cryst. (2007). E63, m1687    [ doi:10.1107/S1600536807023409 ]

Sodium 2,4-dinitrophenolate monohydrate

N. von Prondzinski, M. Winter and K. Merz

Abstract top

The title compound, Na+·C6H3N2O5-·H2O, was obtained by the reaction of sodium hydroxide with 2,4-dinitrophenol in water. The crystal packing shows a laminated structure with intercalated coordinated 2,4-dinitrophenolate spacers, where Na+ cations and water molecules lie on twofold rotation axes. The laminated structure consists of NaO6 chains linked by 2,4-dinitrophenolate ligands. Each Na+ cation exhibits a distorted octahedral geometry. One cation is surrounded by four water molecules and two O atoms from two 4-nitro groups. The other is surrounded by two O atoms from two 2-nitro groups and four phenolate O atoms.

Comment top

2,4-Dinitrophenolate is a versatile ligand for crystal engineering, which is able to coordinate with phenoxy or nitro groups to metal centers, yielding different metal complexes (Prondzinski et al., 2007; Zaderenko et al., 1997). It is known that nitrophenols not only form various π-stacking complexes with other aromatic molecules but also form salts through specific electrostatic or hydrogen-bonding interactions (In et al., 1997). The bonding of electron-donor-acceptor complexes depends strongly on the substitution pattern of nitro and hydroxy groups on the benzene ring.

The asymmetric unit of (I) is shown in Fig. 1, where Na atoms and water molecules each lies on a twofold rotation axis. The crystal packing of (I) shows a laminated structure with intercalated coordinated 2,4-dinitrophenolate spacer (Fig. 2). The laminated structure consists of NaO6 chains linked by 2,4-dinitrophenolate ligands. Each Na atom exhibits a distorted octahedral geometry. The Na1 atom is surrounded by four water molecules and two O atoms from two para-nitro groups. The Na2 atom is surrounded by two O atoms from two ortho-nitro groups and four phenolate O atoms.

Related literature top

For general background, see: Prondzinski et al. 2007; Zaderenko et al. 1997. For a related structure, see: In et al. 1997.

Experimental top

Compound (I) was obtained as the product of the reaction of sodium hydroxide (0.20 g, 5 mmol) with 2,4-dinitrophenol (0.70 g, 3.8 mmol) in water (10 ml) (yield 0.66 g).

Refinement top

H atoms on water molecules were located in a difference map and refined isotropically. The other H atoms were positioned geometrically and refined as riding, with C—H = 0.94 Å and Uiso(H) = 1.2Ueq(C).

Computing details top

Data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 2001); software used to prepare material for publication: SHELXTL and local programs.

Figures top
[Figure 1] Fig. 1. The asymmetric unit of (I). Displacement ellipsoids are drawn at the 50% probability level.
[Figure 2] Fig. 2. The crystal packing of (I). Dashed lines denote hydrogen bonds.
Sodium 2,4-dinitrophenolate Monohydrate top
Crystal data top
Na+.C6H3NO5.H2OF(000) = 456
Mr = 224.11Dx = 1.851 Mg m3
Monoclinic, C2Mo Kα radiation, λ = 0.71073 Å
Hall symbol: C 2yCell parameters from 3132 reflections
a = 19.962 (3) Åθ = 3.2–27.0°
b = 11.4615 (17) ŵ = 0.21 mm1
c = 3.5291 (5) ÅT = 203 K
β = 95.136 (12)°Needle, yellow
V = 804.2 (2) Å30.20 × 0.10 × 0.10 mm
Z = 4
Data collection top
Bruker SMART 1K CCD area-detector
diffractometer
971 independent reflections
Radiation source: fine-focus sealed tube716 reflections with I > 2σ(I)
graphiteRint = 0.066
Detector resolution: 8.192 pixels mm-1θmax = 27.5°, θmin = 3.6°
φ and ω scanh = 2525
Absorption correction: multi-scan
(SADABS; Sheldrick, 1996)
k = 1414
Tmin = 0.959, Tmax = 0.979l = 44
5696 measured reflections
Refinement top
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.040H atoms treated by a mixture of independent and constrained refinement
S = 0.90 w = 1/[σ2(Fo2) + (0.0097P)2]
where P = (Fo2 + 2Fc2)/3
971 reflections(Δ/σ)max < 0.001
145 parametersΔρmax = 0.19 e Å3
1 restraintΔρmin = 0.22 e Å3
Crystal data top
Na+.C6H3NO5.H2OV = 804.2 (2) Å3
Mr = 224.11Z = 4
Monoclinic, C2Mo Kα radiation
a = 19.962 (3) ŵ = 0.21 mm1
b = 11.4615 (17) ÅT = 203 K
c = 3.5291 (5) Å0.20 × 0.10 × 0.10 mm
β = 95.136 (12)°
Data collection top
Bruker SMART 1K CCD area-detector
diffractometer
971 independent reflections
Absorption correction: multi-scan
(SADABS; Sheldrick, 1996)
716 reflections with I > 2σ(I)
Tmin = 0.959, Tmax = 0.979Rint = 0.066
5696 measured reflectionsθmax = 27.5°
Refinement top
R[F2 > 2σ(F2)] = 0.032H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.040Δρmax = 0.19 e Å3
S = 0.90Δρmin = 0.22 e Å3
971 reflectionsAbsolute structure: ?
145 parametersFlack parameter: ?
1 restraintRogers parameter: ?
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Na10.50000.10008 (15)0.00000.0181 (4)
Na20.00000.00873 (14)0.00000.0166 (5)
O50.07595 (10)0.03588 (16)0.4527 (6)0.0149 (5)
N10.34206 (13)0.1025 (2)0.1758 (7)0.0173 (7)
O10.06035 (10)0.18077 (16)0.7752 (6)0.0187 (6)
O40.38225 (10)0.03559 (17)0.0055 (6)0.0200 (6)
O30.12530 (9)0.3073 (2)0.4714 (5)0.0207 (5)
N20.11202 (13)0.2052 (2)0.5748 (7)0.0152 (6)
O20.35961 (10)0.19710 (18)0.3024 (6)0.0210 (6)
C10.25320 (16)0.0447 (3)0.1392 (8)0.0139 (8)
H1A0.28520.09760.02810.017*
C20.13592 (15)0.0009 (3)0.3809 (8)0.0120 (7)
C30.18714 (15)0.0772 (3)0.2110 (9)0.0132 (7)
H3A0.17480.15330.14570.016*
C40.22575 (15)0.1487 (3)0.3777 (8)0.0122 (8)
H4A0.23870.22560.42820.015*
C50.15992 (15)0.1149 (3)0.4466 (8)0.0123 (7)
C60.27234 (15)0.0690 (3)0.2343 (9)0.0117 (7)
O70.50000.2456 (3)0.50000.0178 (8)
O80.50000.0418 (3)0.50000.0181 (8)
H20.5300 (14)0.088 (3)0.511 (10)0.022 (10)*
H10.4654 (15)0.298 (3)0.498 (9)0.051 (11)*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Na10.0162 (11)0.0180 (10)0.0203 (11)0.0000.0020 (8)0.000
Na20.0116 (10)0.0212 (11)0.0167 (11)0.0000.0002 (8)0.000
O50.0122 (13)0.0141 (12)0.0178 (13)0.0009 (10)0.0013 (10)0.0014 (10)
N10.0212 (18)0.0185 (16)0.0129 (16)0.0039 (15)0.0055 (13)0.0065 (14)
O10.0119 (13)0.0183 (14)0.0236 (13)0.0022 (11)0.0113 (11)0.0010 (10)
O40.0094 (13)0.0237 (14)0.0258 (15)0.0054 (10)0.0052 (11)0.0030 (11)
O30.0187 (12)0.0143 (12)0.0288 (14)0.0007 (12)0.0004 (10)0.0036 (13)
N20.0171 (17)0.0168 (16)0.0128 (15)0.0001 (13)0.0073 (13)0.0014 (13)
O20.0166 (13)0.0165 (14)0.0298 (14)0.0059 (11)0.0012 (11)0.0006 (11)
C10.0128 (19)0.0193 (19)0.010 (2)0.0038 (15)0.0013 (15)0.0007 (15)
C20.0126 (19)0.0153 (18)0.0087 (18)0.0033 (16)0.0046 (15)0.0018 (14)
C30.0162 (19)0.0113 (18)0.0127 (18)0.0015 (15)0.0054 (15)0.0026 (14)
C40.0145 (19)0.0124 (17)0.0098 (18)0.0024 (14)0.0013 (14)0.0006 (13)
C50.0108 (18)0.0160 (18)0.0096 (18)0.0045 (16)0.0012 (13)0.0002 (15)
C60.0077 (19)0.017 (2)0.0101 (17)0.0032 (13)0.0011 (13)0.0018 (14)
O70.016 (2)0.0138 (19)0.024 (2)0.0000.0046 (17)0.000
O80.012 (2)0.013 (2)0.029 (2)0.0000.0019 (18)0.000
Geometric parameters (Å, °) top
Na1—O8i2.400 (3)N1—O41.245 (3)
Na1—O82.400 (3)N1—C61.441 (4)
Na1—O72.428 (2)O1—N21.230 (3)
Na1—O7i2.428 (2)O3—N21.247 (3)
Na1—O42.466 (2)N2—C51.454 (4)
Na1—O4ii2.466 (2)C1—C31.372 (4)
Na1—Na1i3.5291 (5)C1—C61.407 (4)
Na2—O5iii2.355 (2)C1—H1A0.9400
Na2—O52.355 (2)C2—C51.436 (4)
Na2—O5iv2.401 (2)C2—C31.435 (4)
Na2—O5v2.401 (2)C3—H3A0.9400
Na2—O1v2.408 (2)C4—C51.371 (4)
Na2—O1iv2.408 (2)C4—C61.368 (4)
Na2—Na2i3.5291 (5)C4—H4A0.9400
O5—C21.267 (3)O7—H10.92 (3)
N1—O21.235 (3)O8—H20.80 (3)
O8i—Na1—O894.67 (14)O5v—Na2—Na2i138.40 (5)
O8i—Na1—O7179.28 (11)O1v—Na2—Na2i106.54 (5)
O8—Na1—O786.05 (7)O1iv—Na2—Na2i73.46 (5)
O8i—Na1—O7i86.05 (7)O5iii—Na2—Na2v42.60 (5)
O8—Na1—O7i179.28 (11)O5—Na2—Na2v137.40 (5)
O7—Na1—O7i93.23 (12)O5iv—Na2—Na2v138.40 (5)
O8i—Na1—O482.26 (6)O5v—Na2—Na2v41.60 (5)
O8—Na1—O474.23 (6)O1v—Na2—Na2v73.46 (5)
O7—Na1—O497.94 (5)O1iv—Na2—Na2v106.54 (5)
O7i—Na1—O4105.88 (5)Na2i—Na2—Na2v180.00 (5)
O8i—Na1—O4ii74.23 (6)C2—O5—Na2116.73 (18)
O8—Na1—O4ii82.26 (6)C2—O5—Na2i127.66 (19)
O7—Na1—O4ii105.88 (5)Na2—O5—Na2i95.80 (7)
O7i—Na1—O4ii97.94 (5)O2—N1—O4122.4 (3)
O4—Na1—O4ii145.11 (12)O2—N1—C6118.9 (3)
O8i—Na1—Na1i42.67 (7)O4—N1—C6118.6 (3)
O8—Na1—Na1i137.33 (7)N2—O1—Na2i138.17 (18)
O7—Na1—Na1i136.61 (6)N1—O4—Na1112.46 (18)
O7i—Na1—Na1i43.39 (6)O1—N2—O3121.8 (2)
O4—Na1—Na1i95.35 (5)O1—N2—C5120.8 (3)
O4ii—Na1—Na1i84.65 (5)O3—N2—C5117.4 (2)
O8i—Na1—Na1v137.33 (7)C3—C1—C6119.0 (3)
O8—Na1—Na1v42.67 (7)C3—C1—H1A120.5
O7—Na1—Na1v43.39 (6)C6—C1—H1A120.5
O7i—Na1—Na1v136.61 (6)O5—C2—C5125.7 (3)
O4—Na1—Na1v84.65 (5)O5—C2—C3121.0 (3)
O4ii—Na1—Na1v95.35 (5)C5—C2—C3113.3 (3)
Na1i—Na1—Na1v180.00 (6)C1—C3—C2123.3 (3)
O5iii—Na2—O5154.92 (12)C1—C3—H3A118.4
O5iii—Na2—O5iv95.80 (7)C2—C3—H3A118.4
O5—Na2—O5iv78.85 (8)C5—C4—C6119.1 (3)
O5iii—Na2—O5v78.85 (8)C5—C4—H4A120.4
O5—Na2—O5v95.80 (7)C6—C4—H4A120.4
O5iv—Na2—O5v155.41 (11)C4—C5—C2124.1 (3)
O5iii—Na2—O1v106.72 (7)C4—C5—N2116.6 (3)
O5—Na2—O1v93.89 (8)C2—C5—N2119.2 (3)
O5iv—Na2—O1v134.48 (8)C4—C6—C1121.1 (3)
O5v—Na2—O1v69.40 (7)C4—C6—N1119.4 (3)
O5iii—Na2—O1iv93.89 (8)C1—C6—N1119.5 (3)
O5—Na2—O1iv106.72 (7)Na1—O7—Na1v93.23 (12)
O5iv—Na2—O1iv69.40 (7)Na1—O7—H1120 (2)
O5v—Na2—O1iv134.48 (8)Na1v—O7—H1114 (2)
O1v—Na2—O1iv70.04 (10)Na1v—O8—Na194.67 (14)
O5iii—Na2—Na2i137.40 (5)Na1v—O8—H2118 (2)
O5—Na2—Na2i42.60 (5)Na1—O8—H2116 (2)
O5iv—Na2—Na2i41.60 (5)
Symmetry codes: (i) x, y, z+1; (ii) −x−1, y, −z; (iii) −x, y, −z; (iv) −x, y, −z+1; (v) x, y, z−1.
Hydrogen-bond geometry (Å, °) top
D—H···AD—HH···AD···AD—H···A
O8—H2···O3vi0.80 (3)2.25 (3)3.035 (3)171 (3)
O7—H1···O5vii0.92 (3)2.07 (3)2.925 (3)154 (3)
Symmetry codes: (vi) x−1/2, y+1/2, z−1; (vii) −x−1/2, y−1/2, −z.
Table 1
Hydrogen-bond geometry (Å, °)
top
D—H···AD—HH···AD···AD—H···A
O8—H2···O3i0.80 (3)2.25 (3)3.035 (3)171 (3)
O7—H1···O5ii0.92 (3)2.07 (3)2.925 (3)154 (3)
Symmetry codes: (i) x−1/2, y+1/2, z−1; (ii) −x−1/2, y−1/2, −z.
Acknowledgements top

We are grateful to the Deutsche Forschungsgemeinschaft (SFB 558 Metall-Substratwechselwirkungen in der heterogenen Katalyse) for financial support.

references
References top

Bruker (2001). SMART, SAINT and SHELXTL. Bruker AXS Inc., Madison, Wisconsin, USA.

In, Y., Nagata, H., Doi, M., Ishida, T. & Wakahara, A. (1997). Acta Cryst. C53, 367–369.

Prondzinski, N. von, Babai, A., Mudring, A. V. & Merz, K. (2007). Z. Anorg. Allg. Chem. In the press.

Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany.

Sheldrick, G. M. (1997). SHELXS97 and SHELXL97. University of Göttingen, Germany.

Zaderenko, P., Gil, M. S., López, P., Ballesteros, P., Fonseca, I. & Albert, A. (1997). Acta Cryst. B53, 961–967.