Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807025500/ng2271sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807025500/ng2271Isup2.hkl |
CCDC reference: 650581
Key indicators
- Single-crystal X-ray study
- T = 120 K
- Mean (C-C) = 0.004 Å
- R factor = 0.034
- wR factor = 0.096
- Data-to-parameter ratio = 17.7
checkCIF/PLATON results
No syntax errors found
Alert level B PLAT232_ALERT_2_B Hirshfeld Test Diff (M-X) Zn1 - Si2 .. 18.36 su PLAT232_ALERT_2_B Hirshfeld Test Diff (M-X) Zn1 - O4 .. 15.63 su
Alert level C PLAT029_ALERT_3_C _diffrn_measured_fraction_theta_full Low ....... 0.98 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C21
Alert level G PLAT794_ALERT_5_G Check Predicted Bond Valency for Zn1 (2) 1.90
0 ALERT level A = In general: serious problem 2 ALERT level B = Potentially serious problem 2 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 3 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 1 ALERT type 5 Informative message, check
The title compound crystallized from acetonitrile and 2-propanol solution of equimolar quantities of zinc acetyloacetonate, tri-tert-butoxysilanethiol and 2-ethylimidazole at 255 K.
All H atoms were positioned geometrically and refined using riding model with C—H distances of 0.93 and with isotropic temperature factors Uiso 1.2 times the equivalent isotropic temperature factors Ueq of their attached atoms.
The geometry of coordinating atoms in the molecule of the title complex, (I) (Fig. 1), may be approximated to distorted trigonal bipyramidal.The central atom of zinc is coordinated by five atoms; two sulfur S1, S2, one nitrogen N1 and two oxygen atoms O1 and O4 (Fig. 1). The basal trigonal plane is formed by atoms Zn1, S1, S2 and N1; Zn1 deviates from the plane at the O4 side by 0.0460 (5) Å and it is the most deviating atom. The O1 and O4 atoms occupy two apical positions. The perpendicular distances between O1, O4 and plane Zn1—S1—S2—N1 are 2.4134 (14) Å and 2.3701 (13) Å respectively. Complexation of O1 and O4 with zinc is reflected in the respective Si—O bond lengths: Si1—O1 and Si2—O4 are definitely longer then the rest of Si—O bonds.
Molecules of zinc thiolate and 2-propanol are linked via N—H···O and O—H···S hydrogen bonds to generate antiparallel chains along the c axis, as shown in Fig. 2. The tert-butyl groups on both sides of each chain prevent other interactions than hydrophobic between the chains.
The analogous penta-coordinated complex with 1-methylimidazole (which has a blocked N—H function) also has a tbp geometry (Dołęga Anna et al., 2004) but the molecules pack in crystal as discrete units.
For an analogous compound with 1-methylimidazole, see Dołęga et al. (2004).
Data collection: CrysAlis CCD (Oxford Diffraction, 2006); cell refinement: CrysAlis RED (Oxford Diffraction, 2006); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
[Zn(C12H27O3SSi)2(C5H8N2)]·C3H8O | F(000) = 1688 |
Mr = 780.57 | Dx = 1.161 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 26429 reflections |
a = 9.8958 (2) Å | θ = 2.2–32.3° |
b = 25.3673 (6) Å | µ = 0.74 mm−1 |
c = 19.8040 (5) Å | T = 120 K |
β = 116.064 (2)° | Prism, colourless |
V = 4465.82 (18) Å3 | 0.32 × 0.16 × 0.09 mm |
Z = 4 |
Oxford Diffraction KM-4-CCD κ-geometry diffractometer | 7709 independent reflections |
Graphite monochromator | 6892 reflections with I > 2σ(I) |
Detector resolution: 8.1883 pixels mm-1 | Rint = 0.018 |
ω scans, 0.75° width | θmax = 25.1°, θmin = 2.2° |
Absorption correction: analytical (CrysAlis RED; Oxford Diffraction, 2006) | h = −11→11 |
Tmin = 0.769, Tmax = 0.885 | k = −29→30 |
25240 measured reflections | l = −23→16 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.034 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.096 | H-atom parameters constrained |
S = 1.13 | w = 1/[σ2(Fo2) + (0.0555P)2 + 1.9663P] where P = (Fo2 + 2Fc2)/3 |
7709 reflections | (Δ/σ)max = 0.002 |
436 parameters | Δρmax = 0.43 e Å−3 |
0 restraints | Δρmin = −0.32 e Å−3 |
[Zn(C12H27O3SSi)2(C5H8N2)]·C3H8O | V = 4465.82 (18) Å3 |
Mr = 780.57 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 9.8958 (2) Å | µ = 0.74 mm−1 |
b = 25.3673 (6) Å | T = 120 K |
c = 19.8040 (5) Å | 0.32 × 0.16 × 0.09 mm |
β = 116.064 (2)° |
Oxford Diffraction KM-4-CCD κ-geometry diffractometer | 7709 independent reflections |
Absorption correction: analytical (CrysAlis RED; Oxford Diffraction, 2006) | 6892 reflections with I > 2σ(I) |
Tmin = 0.769, Tmax = 0.885 | Rint = 0.018 |
25240 measured reflections |
R[F2 > 2σ(F2)] = 0.034 | 0 restraints |
wR(F2) = 0.096 | H-atom parameters constrained |
S = 1.13 | Δρmax = 0.43 e Å−3 |
7709 reflections | Δρmin = −0.32 e Å−3 |
436 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Zn1 | 0.11065 (2) | 0.858298 (9) | 0.168011 (12) | 0.02689 (9) | |
S1 | −0.14032 (5) | 0.838733 (18) | 0.11807 (3) | 0.02538 (12) | |
S2 | 0.27814 (6) | 0.866765 (19) | 0.29095 (3) | 0.02821 (12) | |
Si1 | −0.09197 (6) | 0.75822 (2) | 0.12344 (3) | 0.02343 (13) | |
Si2 | 0.22006 (6) | 0.94624 (2) | 0.28076 (3) | 0.02166 (12) | |
O1 | 0.09257 (15) | 0.75833 (5) | 0.15834 (8) | 0.0287 (3) | |
O2 | −0.15485 (17) | 0.72856 (5) | 0.04283 (8) | 0.0306 (3) | |
O3 | −0.15266 (17) | 0.72450 (5) | 0.17437 (8) | 0.0303 (3) | |
O4 | 0.09130 (14) | 0.95017 (5) | 0.19224 (7) | 0.0226 (3) | |
O5 | 0.16053 (15) | 0.96744 (5) | 0.34042 (8) | 0.0283 (3) | |
O6 | 0.35044 (15) | 0.98787 (5) | 0.28657 (7) | 0.0247 (3) | |
N1 | 0.17911 (19) | 0.86101 (6) | 0.08619 (10) | 0.0274 (4) | |
N2 | 0.3103 (2) | 0.86372 (7) | 0.02171 (10) | 0.0350 (4) | |
H2 | 0.3855 | 0.869 | 0.0102 | 0.042* | |
C1 | 0.1993 (3) | 0.71605 (9) | 0.16691 (14) | 0.0388 (5) | |
C2 | 0.3435 (3) | 0.73192 (11) | 0.23355 (16) | 0.0534 (7) | |
H2A | 0.3738 | 0.7671 | 0.2248 | 0.064* | |
H2B | 0.4228 | 0.7065 | 0.24 | 0.064* | |
H2C | 0.3275 | 0.7325 | 0.279 | 0.064* | |
C3 | 0.2208 (4) | 0.71335 (12) | 0.09567 (16) | 0.0575 (7) | |
H3A | 0.1239 | 0.7062 | 0.0526 | 0.069* | |
H3B | 0.2919 | 0.6851 | 0.1003 | 0.069* | |
H3C | 0.2605 | 0.7471 | 0.088 | 0.069* | |
C4 | 0.1415 (3) | 0.66356 (10) | 0.18129 (17) | 0.0538 (7) | |
H4A | 0.1212 | 0.6668 | 0.2253 | 0.065* | |
H4B | 0.2176 | 0.6362 | 0.1906 | 0.065* | |
H4C | 0.0486 | 0.6539 | 0.1373 | 0.065* | |
C5 | −0.2955 (3) | 0.70240 (9) | −0.00344 (12) | 0.0383 (5) | |
C6 | −0.4276 (3) | 0.73258 (12) | −0.00333 (16) | 0.0556 (7) | |
H6A | −0.4215 | 0.7323 | 0.0474 | 0.067* | |
H6B | −0.5218 | 0.7159 | −0.0383 | 0.067* | |
H6C | −0.4249 | 0.7691 | −0.019 | 0.067* | |
C7 | −0.2893 (4) | 0.64690 (10) | 0.02595 (17) | 0.0646 (9) | |
H7A | −0.2012 | 0.6286 | 0.0269 | 0.078* | |
H7B | −0.3808 | 0.6278 | −0.007 | 0.078* | |
H7C | −0.2817 | 0.6483 | 0.0769 | 0.078* | |
C8 | −0.3043 (3) | 0.70145 (11) | −0.08191 (13) | 0.0487 (6) | |
H8A | −0.3056 | 0.7377 | −0.0994 | 0.058* | |
H8B | −0.3964 | 0.6833 | −0.1162 | 0.058* | |
H8C | −0.2166 | 0.6828 | −0.0808 | 0.058* | |
C9 | −0.1582 (3) | 0.73539 (9) | 0.24493 (12) | 0.0355 (5) | |
C10 | −0.0101 (3) | 0.75815 (10) | 0.30176 (13) | 0.0428 (6) | |
H10A | 0.0715 | 0.7334 | 0.3094 | 0.051* | |
H10B | −0.0149 | 0.764 | 0.3496 | 0.051* | |
H10C | 0.0088 | 0.7917 | 0.283 | 0.051* | |
C11 | −0.2876 (3) | 0.77313 (11) | 0.23045 (15) | 0.0494 (6) | |
H11A | −0.2652 | 0.8075 | 0.2152 | 0.059* | |
H11B | −0.3005 | 0.7772 | 0.2765 | 0.059* | |
H11C | −0.3803 | 0.759 | 0.1904 | 0.059* | |
C12 | −0.1868 (4) | 0.68200 (11) | 0.27136 (15) | 0.0555 (7) | |
H12A | −0.2846 | 0.6684 | 0.2351 | 0.067* | |
H12B | −0.1869 | 0.6859 | 0.3206 | 0.067* | |
H12C | −0.1075 | 0.6573 | 0.2754 | 0.067* | |
C13 | 0.0247 (2) | 0.99659 (7) | 0.14529 (11) | 0.0264 (4) | |
C14 | 0.1271 (3) | 1.01286 (10) | 0.10996 (13) | 0.0399 (5) | |
H14A | 0.2263 | 1.0223 | 0.1496 | 0.048* | |
H14B | 0.0836 | 1.0433 | 0.0771 | 0.048* | |
H14C | 0.1374 | 0.9835 | 0.0804 | 0.048* | |
C15 | −0.1274 (2) | 0.97845 (8) | 0.08538 (11) | 0.0302 (4) | |
H15A | −0.113 | 0.9493 | 0.0568 | 0.036* | |
H15B | −0.1773 | 1.0078 | 0.0513 | 0.036* | |
H15C | −0.19 | 0.9666 | 0.1095 | 0.036* | |
C16 | 0.0056 (3) | 1.04084 (8) | 0.19196 (13) | 0.0374 (5) | |
H16A | −0.058 | 1.0287 | 0.2153 | 0.045* | |
H16B | −0.0419 | 1.0712 | 0.1595 | 0.045* | |
H16C | 0.1043 | 1.0512 | 0.2312 | 0.045* | |
C17 | 0.0593 (3) | 0.94675 (10) | 0.36897 (12) | 0.0361 (5) | |
C18 | −0.0770 (3) | 0.92107 (11) | 0.30563 (13) | 0.0432 (6) | |
H18A | −0.1272 | 0.9468 | 0.2653 | 0.052* | |
H18B | −0.1474 | 0.9091 | 0.3251 | 0.052* | |
H18C | −0.0441 | 0.8908 | 0.2858 | 0.052* | |
C19 | 0.1431 (3) | 0.90773 (12) | 0.43099 (14) | 0.0530 (7) | |
H19A | 0.175 | 0.8777 | 0.4104 | 0.064* | |
H19B | 0.077 | 0.8954 | 0.4528 | 0.064* | |
H19C | 0.2318 | 0.9248 | 0.4701 | 0.064* | |
C20 | 0.0106 (3) | 0.99499 (12) | 0.39924 (15) | 0.0511 (7) | |
H20A | 0.0994 | 1.0119 | 0.4386 | 0.061* | |
H20B | −0.0579 | 0.9839 | 0.4203 | 0.061* | |
H20C | −0.0409 | 1.0201 | 0.3582 | 0.061* | |
C21 | 0.4762 (2) | 1.01019 (8) | 0.35030 (11) | 0.0266 (4) | |
C22 | 0.4187 (3) | 1.05600 (10) | 0.38037 (15) | 0.0447 (6) | |
H22A | 0.3676 | 1.0816 | 0.34 | 0.054* | |
H22B | 0.5036 | 1.0731 | 0.4217 | 0.054* | |
H22C | 0.3479 | 1.0427 | 0.3987 | 0.054* | |
C23 | 0.5826 (3) | 1.03099 (12) | 0.32033 (15) | 0.0506 (6) | |
H23A | 0.6187 | 1.0017 | 0.3004 | 0.061* | |
H23B | 0.6684 | 1.0482 | 0.361 | 0.061* | |
H23C | 0.5298 | 1.0565 | 0.2802 | 0.061* | |
C24 | 0.5511 (3) | 0.96889 (10) | 0.40965 (14) | 0.0490 (6) | |
H24A | 0.4788 | 0.9552 | 0.4267 | 0.059* | |
H24B | 0.6368 | 0.9846 | 0.4523 | 0.059* | |
H24C | 0.5865 | 0.94 | 0.3886 | 0.059* | |
C25 | 0.0917 (2) | 0.84240 (9) | 0.01462 (12) | 0.0343 (5) | |
H25 | −0.0091 | 0.8304 | −0.0035 | 0.041* | |
C26 | 0.1718 (3) | 0.84400 (9) | −0.02545 (13) | 0.0378 (5) | |
H26 | 0.1388 | 0.8335 | −0.0763 | 0.045* | |
C27 | 0.3117 (2) | 0.87356 (8) | 0.08902 (12) | 0.0318 (5) | |
C28 | 0.4440 (3) | 0.89577 (12) | 0.15449 (14) | 0.0539 (7) | |
H28A | 0.4124 | 0.9055 | 0.1938 | 0.065* | |
H28B | 0.5215 | 0.8679 | 0.1755 | 0.065* | |
C29 | 0.5123 (4) | 0.94198 (12) | 0.13745 (17) | 0.0628 (8) | |
H29A | 0.5409 | 0.9333 | 0.0973 | 0.075* | |
H29B | 0.602 | 0.9525 | 0.1826 | 0.075* | |
H29C | 0.4398 | 0.9711 | 0.1211 | 0.075* | |
O7 | 0.54940 (18) | 0.62127 (8) | 0.48632 (9) | 0.0447 (4) | |
H7 | 0.6368 | 0.6308 | 0.5162 | 0.054* | |
C30 | 0.5533 (2) | 0.59525 (9) | 0.42315 (12) | 0.0328 (5) | |
H30 | 0.6121 | 0.5618 | 0.4405 | 0.039* | |
C31 | 0.6262 (3) | 0.62962 (10) | 0.38684 (14) | 0.0424 (6) | |
H31A | 0.729 | 0.6381 | 0.4235 | 0.051* | |
H31B | 0.5682 | 0.6623 | 0.3692 | 0.051* | |
H31C | 0.6288 | 0.6109 | 0.3441 | 0.051* | |
C32 | 0.3924 (3) | 0.58204 (11) | 0.37114 (14) | 0.0456 (6) | |
H32A | 0.3343 | 0.6147 | 0.3538 | 0.055* | |
H32B | 0.3495 | 0.5605 | 0.398 | 0.055* | |
H32C | 0.3888 | 0.5623 | 0.3278 | 0.055* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.02290 (14) | 0.03310 (15) | 0.02241 (14) | −0.00520 (9) | 0.00787 (11) | −0.00236 (9) |
S1 | 0.0221 (2) | 0.0231 (2) | 0.0275 (3) | −0.00115 (18) | 0.0077 (2) | −0.00005 (18) |
S2 | 0.0275 (3) | 0.0241 (2) | 0.0242 (3) | 0.00294 (19) | 0.0032 (2) | 0.00118 (18) |
Si1 | 0.0273 (3) | 0.0212 (3) | 0.0222 (3) | −0.0029 (2) | 0.0113 (2) | −0.0008 (2) |
Si2 | 0.0200 (3) | 0.0229 (3) | 0.0185 (3) | 0.0002 (2) | 0.0052 (2) | −0.00069 (19) |
O1 | 0.0280 (8) | 0.0257 (7) | 0.0315 (8) | 0.0033 (6) | 0.0122 (7) | 0.0012 (6) |
O2 | 0.0374 (8) | 0.0301 (7) | 0.0256 (8) | −0.0085 (6) | 0.0149 (7) | −0.0053 (6) |
O3 | 0.0419 (9) | 0.0269 (7) | 0.0258 (7) | −0.0070 (6) | 0.0182 (7) | −0.0018 (6) |
O4 | 0.0201 (7) | 0.0216 (6) | 0.0203 (7) | 0.0012 (5) | 0.0036 (6) | 0.0016 (5) |
O5 | 0.0269 (7) | 0.0346 (8) | 0.0237 (7) | −0.0022 (6) | 0.0113 (6) | −0.0037 (6) |
O6 | 0.0219 (7) | 0.0277 (7) | 0.0198 (7) | −0.0025 (5) | 0.0048 (6) | −0.0009 (5) |
N1 | 0.0251 (9) | 0.0285 (9) | 0.0267 (9) | −0.0032 (7) | 0.0096 (8) | −0.0008 (7) |
N2 | 0.0300 (10) | 0.0440 (11) | 0.0345 (10) | −0.0017 (8) | 0.0174 (9) | 0.0028 (8) |
C1 | 0.0382 (13) | 0.0324 (11) | 0.0470 (14) | 0.0135 (10) | 0.0198 (11) | 0.0051 (10) |
C2 | 0.0346 (14) | 0.0544 (16) | 0.0619 (18) | 0.0154 (12) | 0.0127 (13) | 0.0028 (13) |
C3 | 0.0698 (19) | 0.0546 (16) | 0.0609 (18) | 0.0253 (14) | 0.0404 (16) | 0.0045 (13) |
C4 | 0.0567 (16) | 0.0319 (13) | 0.0716 (19) | 0.0143 (12) | 0.0271 (15) | 0.0093 (12) |
C5 | 0.0481 (14) | 0.0354 (12) | 0.0281 (12) | −0.0207 (10) | 0.0138 (11) | −0.0098 (9) |
C6 | 0.0407 (15) | 0.0767 (19) | 0.0458 (16) | −0.0236 (13) | 0.0158 (13) | −0.0202 (14) |
C7 | 0.102 (3) | 0.0393 (14) | 0.0476 (16) | −0.0335 (15) | 0.0280 (17) | −0.0087 (12) |
C8 | 0.0609 (17) | 0.0530 (15) | 0.0287 (13) | −0.0182 (13) | 0.0166 (12) | −0.0106 (11) |
C9 | 0.0498 (14) | 0.0361 (12) | 0.0263 (11) | −0.0087 (10) | 0.0219 (11) | −0.0010 (9) |
C10 | 0.0582 (16) | 0.0429 (13) | 0.0277 (12) | −0.0087 (11) | 0.0192 (12) | 0.0001 (10) |
C11 | 0.0584 (16) | 0.0609 (16) | 0.0430 (15) | −0.0023 (13) | 0.0353 (14) | −0.0032 (12) |
C12 | 0.088 (2) | 0.0476 (15) | 0.0413 (15) | −0.0232 (14) | 0.0375 (16) | 0.0003 (11) |
C13 | 0.0240 (10) | 0.0236 (9) | 0.0233 (10) | 0.0010 (8) | 0.0028 (9) | 0.0049 (8) |
C14 | 0.0322 (12) | 0.0464 (13) | 0.0349 (12) | −0.0047 (10) | 0.0091 (10) | 0.0122 (10) |
C15 | 0.0246 (10) | 0.0315 (10) | 0.0256 (11) | 0.0011 (8) | 0.0029 (9) | 0.0031 (8) |
C16 | 0.0350 (12) | 0.0267 (10) | 0.0339 (12) | 0.0061 (9) | 0.0001 (10) | −0.0008 (9) |
C17 | 0.0325 (12) | 0.0525 (14) | 0.0268 (11) | −0.0091 (10) | 0.0161 (10) | −0.0055 (9) |
C18 | 0.0343 (13) | 0.0610 (15) | 0.0361 (13) | −0.0151 (11) | 0.0172 (11) | −0.0092 (11) |
C19 | 0.0545 (16) | 0.0713 (18) | 0.0346 (14) | −0.0109 (14) | 0.0208 (13) | 0.0078 (12) |
C20 | 0.0425 (14) | 0.0752 (18) | 0.0424 (14) | −0.0064 (13) | 0.0248 (12) | −0.0205 (13) |
C21 | 0.0221 (10) | 0.0290 (10) | 0.0215 (10) | −0.0041 (8) | 0.0031 (8) | −0.0027 (8) |
C22 | 0.0401 (14) | 0.0395 (13) | 0.0439 (14) | −0.0024 (10) | 0.0088 (12) | −0.0116 (10) |
C23 | 0.0394 (14) | 0.0657 (17) | 0.0432 (15) | −0.0195 (12) | 0.0148 (12) | −0.0081 (12) |
C24 | 0.0393 (14) | 0.0429 (14) | 0.0390 (14) | −0.0043 (11) | −0.0065 (12) | 0.0052 (11) |
C25 | 0.0290 (11) | 0.0437 (12) | 0.0281 (11) | −0.0096 (9) | 0.0106 (10) | −0.0062 (9) |
C26 | 0.0410 (13) | 0.0439 (13) | 0.0290 (12) | −0.0072 (10) | 0.0158 (11) | −0.0053 (9) |
C27 | 0.0292 (11) | 0.0351 (11) | 0.0300 (11) | −0.0025 (9) | 0.0120 (10) | 0.0053 (9) |
C28 | 0.0367 (14) | 0.0796 (19) | 0.0365 (14) | −0.0215 (13) | 0.0079 (12) | 0.0050 (13) |
C29 | 0.0608 (18) | 0.0635 (18) | 0.0585 (18) | −0.0278 (15) | 0.0209 (15) | −0.0179 (14) |
O7 | 0.0265 (8) | 0.0795 (12) | 0.0296 (9) | −0.0119 (8) | 0.0137 (7) | −0.0124 (8) |
C30 | 0.0286 (11) | 0.0398 (12) | 0.0293 (11) | 0.0002 (9) | 0.0121 (10) | 0.0012 (9) |
C31 | 0.0415 (14) | 0.0523 (14) | 0.0394 (13) | −0.0064 (11) | 0.0233 (12) | −0.0001 (11) |
C32 | 0.0376 (13) | 0.0612 (16) | 0.0373 (13) | −0.0107 (11) | 0.0158 (11) | −0.0080 (11) |
Zn1—N1 | 2.0134 (17) | C12—H12C | 0.98 |
Zn1—S2 | 2.2749 (6) | C13—C16 | 1.518 (3) |
Zn1—S1 | 2.2878 (5) | C13—C14 | 1.519 (3) |
Zn1—O4 | 2.4039 (12) | C13—C15 | 1.522 (3) |
Zn1—O1 | 2.5436 (14) | C14—H14A | 0.98 |
S1—Si1 | 2.0897 (7) | C14—H14B | 0.98 |
S2—Si2 | 2.0818 (7) | C14—H14C | 0.98 |
Si1—O1 | 1.6442 (15) | C15—H15A | 0.98 |
Si1—O2 | 1.6214 (14) | C15—H15B | 0.98 |
Si1—O3 | 1.6253 (14) | C15—H15C | 0.98 |
Si2—O4 | 1.6563 (13) | C16—H16A | 0.98 |
Si2—O5 | 1.6261 (14) | C16—H16B | 0.98 |
Si2—O6 | 1.6317 (14) | C16—H16C | 0.98 |
O1—C1 | 1.462 (2) | C17—C19 | 1.510 (4) |
O2—C5 | 1.448 (3) | C17—C18 | 1.527 (3) |
O3—C9 | 1.449 (2) | C17—C20 | 1.531 (3) |
O4—C13 | 1.465 (2) | C18—H18A | 0.98 |
O5—C17 | 1.448 (2) | C18—H18B | 0.98 |
O6—C21 | 1.443 (2) | C18—H18C | 0.98 |
N1—C27 | 1.327 (3) | C19—H19A | 0.98 |
N1—C25 | 1.379 (3) | C19—H19B | 0.98 |
N2—C27 | 1.350 (3) | C19—H19C | 0.98 |
N2—C26 | 1.370 (3) | C20—H20A | 0.98 |
N2—H2 | 0.88 | C20—H20B | 0.98 |
C1—C2 | 1.512 (4) | C20—H20C | 0.98 |
C1—C3 | 1.518 (3) | C21—C24 | 1.504 (3) |
C1—C4 | 1.524 (3) | C21—C23 | 1.513 (3) |
C2—H2A | 0.98 | C21—C22 | 1.525 (3) |
C2—H2B | 0.98 | C22—H22A | 0.98 |
C2—H2C | 0.98 | C22—H22B | 0.98 |
C3—H3A | 0.98 | C22—H22C | 0.98 |
C3—H3B | 0.98 | C23—H23A | 0.98 |
C3—H3C | 0.98 | C23—H23B | 0.98 |
C4—H4A | 0.98 | C23—H23C | 0.98 |
C4—H4B | 0.98 | C24—H24A | 0.98 |
C4—H4C | 0.98 | C24—H24B | 0.98 |
C5—C7 | 1.514 (3) | C24—H24C | 0.98 |
C5—C6 | 1.515 (4) | C25—C26 | 1.346 (3) |
C5—C8 | 1.518 (3) | C25—H25 | 0.95 |
C6—H6A | 0.98 | C26—H26 | 0.95 |
C6—H6B | 0.98 | C27—C28 | 1.490 (3) |
C6—H6C | 0.98 | C28—C29 | 1.464 (4) |
C7—H7A | 0.98 | C28—H28A | 0.99 |
C7—H7B | 0.98 | C28—H28B | 0.99 |
C7—H7C | 0.98 | C29—H29A | 0.98 |
C8—H8A | 0.98 | C29—H29B | 0.98 |
C8—H8B | 0.98 | C29—H29C | 0.98 |
C8—H8C | 0.98 | O7—C30 | 1.430 (3) |
C9—C10 | 1.516 (3) | O7—H7 | 0.8401 |
C9—C11 | 1.521 (4) | C30—C31 | 1.501 (3) |
C9—C12 | 1.523 (3) | C30—C32 | 1.506 (3) |
C10—H10A | 0.98 | C30—H30 | 1 |
C10—H10B | 0.98 | C31—H31A | 0.98 |
C10—H10C | 0.98 | C31—H31B | 0.98 |
C11—H11A | 0.98 | C31—H31C | 0.98 |
C11—H11B | 0.98 | C32—H32A | 0.98 |
C11—H11C | 0.98 | C32—H32B | 0.98 |
C12—H12A | 0.98 | C32—H32C | 0.98 |
C12—H12B | 0.98 | ||
N1—Zn1—S2 | 120.90 (5) | O4—C13—C16 | 110.46 (16) |
N1—Zn1—S1 | 110.16 (5) | O4—C13—C14 | 107.82 (16) |
S2—Zn1—S1 | 128.70 (2) | C16—C13—C14 | 111.48 (18) |
N1—Zn1—O4 | 102.24 (6) | O4—C13—C15 | 105.46 (15) |
S2—Zn1—O4 | 77.25 (3) | C16—C13—C15 | 110.65 (17) |
S1—Zn1—O4 | 97.47 (3) | C14—C13—C15 | 110.76 (17) |
N1—Zn1—O1 | 90.62 (6) | C13—C14—H14A | 109.5 |
S2—Zn1—O1 | 99.72 (3) | C13—C14—H14B | 109.5 |
S1—Zn1—O1 | 73.98 (3) | H14A—C14—H14B | 109.5 |
O4—Zn1—O1 | 166.52 (4) | C13—C14—H14C | 109.5 |
Si1—S1—Zn1 | 90.53 (2) | H14A—C14—H14C | 109.5 |
Si2—S2—Zn1 | 86.98 (2) | H14B—C14—H14C | 109.5 |
O2—Si1—O3 | 106.26 (7) | C13—C15—H15A | 109.5 |
O2—Si1—O1 | 106.83 (8) | C13—C15—H15B | 109.5 |
O3—Si1—O1 | 112.64 (8) | H15A—C15—H15B | 109.5 |
O2—Si1—S1 | 115.04 (6) | C13—C15—H15C | 109.5 |
O3—Si1—S1 | 114.04 (6) | H15A—C15—H15C | 109.5 |
O1—Si1—S1 | 101.94 (6) | H15B—C15—H15C | 109.5 |
O5—Si2—O6 | 105.21 (7) | C13—C16—H16A | 109.5 |
O5—Si2—O4 | 113.16 (7) | C13—C16—H16B | 109.5 |
O6—Si2—O4 | 104.62 (7) | H16A—C16—H16B | 109.5 |
O5—Si2—S2 | 114.99 (6) | C13—C16—H16C | 109.5 |
O6—Si2—S2 | 116.35 (6) | H16A—C16—H16C | 109.5 |
O4—Si2—S2 | 102.24 (5) | H16B—C16—H16C | 109.5 |
C1—O1—Si1 | 131.29 (14) | O5—C17—C19 | 109.18 (19) |
C1—O1—Zn1 | 134.39 (12) | O5—C17—C18 | 110.31 (17) |
Si1—O1—Zn1 | 93.54 (6) | C19—C17—C18 | 111.1 (2) |
C5—O2—Si1 | 133.00 (13) | O5—C17—C20 | 104.71 (18) |
C9—O3—Si1 | 132.76 (13) | C19—C17—C20 | 111.1 (2) |
C13—O4—Si2 | 129.96 (12) | C18—C17—C20 | 110.2 (2) |
C13—O4—Zn1 | 134.86 (11) | C17—C18—H18A | 109.5 |
Si2—O4—Zn1 | 93.52 (6) | C17—C18—H18B | 109.5 |
C17—O5—Si2 | 134.23 (13) | H18A—C18—H18B | 109.5 |
C21—O6—Si2 | 131.84 (12) | C17—C18—H18C | 109.5 |
C27—N1—C25 | 106.70 (17) | H18A—C18—H18C | 109.5 |
C27—N1—Zn1 | 130.56 (15) | H18B—C18—H18C | 109.5 |
C25—N1—Zn1 | 122.31 (14) | C17—C19—H19A | 109.5 |
C27—N2—C26 | 108.30 (18) | C17—C19—H19B | 109.5 |
C27—N2—H2 | 125.8 | H19A—C19—H19B | 109.5 |
C26—N2—H2 | 125.9 | C17—C19—H19C | 109.5 |
O1—C1—C2 | 105.24 (18) | H19A—C19—H19C | 109.5 |
O1—C1—C3 | 108.31 (18) | H19B—C19—H19C | 109.5 |
C2—C1—C3 | 111.0 (2) | C17—C20—H20A | 109.5 |
O1—C1—C4 | 110.58 (19) | C17—C20—H20B | 109.5 |
C2—C1—C4 | 110.9 (2) | H20A—C20—H20B | 109.5 |
C3—C1—C4 | 110.6 (2) | C17—C20—H20C | 109.5 |
C1—C2—H2A | 109.5 | H20A—C20—H20C | 109.5 |
C1—C2—H2B | 109.5 | H20B—C20—H20C | 109.5 |
H2A—C2—H2B | 109.5 | O6—C21—C24 | 110.46 (17) |
C1—C2—H2C | 109.5 | O6—C21—C23 | 105.98 (16) |
H2A—C2—H2C | 109.5 | C24—C21—C23 | 111.1 (2) |
H2B—C2—H2C | 109.5 | O6—C21—C22 | 108.30 (16) |
C1—C3—H3A | 109.5 | C24—C21—C22 | 111.5 (2) |
C1—C3—H3B | 109.5 | C23—C21—C22 | 109.33 (19) |
H3A—C3—H3B | 109.5 | C21—C22—H22A | 109.5 |
C1—C3—H3C | 109.5 | C21—C22—H22B | 109.5 |
H3A—C3—H3C | 109.5 | H22A—C22—H22B | 109.5 |
H3B—C3—H3C | 109.5 | C21—C22—H22C | 109.5 |
C1—C4—H4A | 109.5 | H22A—C22—H22C | 109.5 |
C1—C4—H4B | 109.5 | H22B—C22—H22C | 109.5 |
H4A—C4—H4B | 109.5 | C21—C23—H23A | 109.5 |
C1—C4—H4C | 109.5 | C21—C23—H23B | 109.5 |
H4A—C4—H4C | 109.5 | H23A—C23—H23B | 109.5 |
H4B—C4—H4C | 109.5 | C21—C23—H23C | 109.5 |
O2—C5—C7 | 108.5 (2) | H23A—C23—H23C | 109.5 |
O2—C5—C6 | 110.94 (18) | H23B—C23—H23C | 109.5 |
C7—C5—C6 | 111.0 (2) | C21—C24—H24A | 109.5 |
O2—C5—C8 | 105.17 (18) | C21—C24—H24B | 109.5 |
C7—C5—C8 | 110.7 (2) | H24A—C24—H24B | 109.5 |
C6—C5—C8 | 110.4 (2) | C21—C24—H24C | 109.5 |
C5—C6—H6A | 109.5 | H24A—C24—H24C | 109.5 |
C5—C6—H6B | 109.5 | H24B—C24—H24C | 109.5 |
H6A—C6—H6B | 109.5 | C26—C25—N1 | 109.25 (19) |
C5—C6—H6C | 109.5 | C26—C25—H25 | 125.4 |
H6A—C6—H6C | 109.5 | N1—C25—H25 | 125.4 |
H6B—C6—H6C | 109.5 | C25—C26—N2 | 106.31 (19) |
C5—C7—H7A | 109.5 | C25—C26—H26 | 126.8 |
C5—C7—H7B | 109.5 | N2—C26—H26 | 126.8 |
H7A—C7—H7B | 109.5 | N1—C27—N2 | 109.44 (19) |
C5—C7—H7C | 109.5 | N1—C27—C28 | 127.0 (2) |
H7A—C7—H7C | 109.5 | N2—C27—C28 | 123.6 (2) |
H7B—C7—H7C | 109.5 | C29—C28—C27 | 114.8 (2) |
C5—C8—H8A | 109.5 | C29—C28—H28A | 108.6 |
C5—C8—H8B | 109.5 | C27—C28—H28A | 108.6 |
H8A—C8—H8B | 109.5 | C29—C28—H28B | 108.6 |
C5—C8—H8C | 109.5 | C27—C28—H28B | 108.6 |
H8A—C8—H8C | 109.5 | H28A—C28—H28B | 107.5 |
H8B—C8—H8C | 109.5 | C28—C29—H29A | 109.5 |
O3—C9—C10 | 110.77 (18) | C28—C29—H29B | 109.5 |
O3—C9—C11 | 108.88 (18) | H29A—C29—H29B | 109.5 |
C10—C9—C11 | 111.0 (2) | C28—C29—H29C | 109.5 |
O3—C9—C12 | 104.69 (17) | H29A—C29—H29C | 109.5 |
C10—C9—C12 | 110.4 (2) | H29B—C29—H29C | 109.5 |
C11—C9—C12 | 110.9 (2) | C30—O7—H7 | 109.4 |
C9—C10—H10A | 109.5 | O7—C30—C31 | 110.75 (19) |
C9—C10—H10B | 109.5 | O7—C30—C32 | 105.92 (18) |
H10A—C10—H10B | 109.5 | C31—C30—C32 | 112.8 (2) |
C9—C10—H10C | 109.5 | O7—C30—H30 | 109.1 |
H10A—C10—H10C | 109.5 | C31—C30—H30 | 109.1 |
H10B—C10—H10C | 109.5 | C32—C30—H30 | 109.1 |
C9—C11—H11A | 109.5 | C30—C31—H31A | 109.5 |
C9—C11—H11B | 109.5 | C30—C31—H31B | 109.5 |
H11A—C11—H11B | 109.5 | H31A—C31—H31B | 109.5 |
C9—C11—H11C | 109.5 | C30—C31—H31C | 109.5 |
H11A—C11—H11C | 109.5 | H31A—C31—H31C | 109.5 |
H11B—C11—H11C | 109.5 | H31B—C31—H31C | 109.5 |
C9—C12—H12A | 109.5 | C30—C32—H32A | 109.5 |
C9—C12—H12B | 109.5 | C30—C32—H32B | 109.5 |
H12A—C12—H12B | 109.5 | H32A—C32—H32B | 109.5 |
C9—C12—H12C | 109.5 | C30—C32—H32C | 109.5 |
H12A—C12—H12C | 109.5 | H32A—C32—H32C | 109.5 |
H12B—C12—H12C | 109.5 | H32B—C32—H32C | 109.5 |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O7i | 0.88 | 1.89 | 2.774 (2) | 179 |
O7—H7···S1ii | 0.84 | 2.37 | 3.1976 (16) | 168 |
Symmetry codes: (i) x, −y+3/2, z−1/2; (ii) x+1, −y+3/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [Zn(C12H27O3SSi)2(C5H8N2)]·C3H8O |
Mr | 780.57 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 120 |
a, b, c (Å) | 9.8958 (2), 25.3673 (6), 19.8040 (5) |
β (°) | 116.064 (2) |
V (Å3) | 4465.82 (18) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.74 |
Crystal size (mm) | 0.32 × 0.16 × 0.09 |
Data collection | |
Diffractometer | Oxford Diffraction KM-4-CCD κ-geometry |
Absorption correction | Analytical (CrysAlis RED; Oxford Diffraction, 2006) |
Tmin, Tmax | 0.769, 0.885 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 25240, 7709, 6892 |
Rint | 0.018 |
(sin θ/λ)max (Å−1) | 0.596 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.034, 0.096, 1.13 |
No. of reflections | 7709 |
No. of parameters | 436 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.43, −0.32 |
Computer programs: CrysAlis CCD (Oxford Diffraction, 2006), CrysAlis RED (Oxford Diffraction, 2006), CrysAlis RED, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
Zn1—N1 | 2.0134 (17) | Zn1—O1 | 2.5436 (14) |
Zn1—S2 | 2.2749 (6) | S1—Si1 | 2.0897 (7) |
Zn1—S1 | 2.2878 (5) | S2—Si2 | 2.0818 (7) |
Zn1—O4 | 2.4039 (12) | ||
N1—Zn1—S2 | 120.90 (5) | S2—Zn1—S1 | 128.70 (2) |
N1—Zn1—S1 | 110.16 (5) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···O7i | 0.88 | 1.89 | 2.774 (2) | 178.5 |
O7—H7···S1ii | 0.84 | 2.37 | 3.1976 (16) | 167.7 |
Symmetry codes: (i) x, −y+3/2, z−1/2; (ii) x+1, −y+3/2, z+1/2. |
The geometry of coordinating atoms in the molecule of the title complex, (I) (Fig. 1), may be approximated to distorted trigonal bipyramidal.The central atom of zinc is coordinated by five atoms; two sulfur S1, S2, one nitrogen N1 and two oxygen atoms O1 and O4 (Fig. 1). The basal trigonal plane is formed by atoms Zn1, S1, S2 and N1; Zn1 deviates from the plane at the O4 side by 0.0460 (5) Å and it is the most deviating atom. The O1 and O4 atoms occupy two apical positions. The perpendicular distances between O1, O4 and plane Zn1—S1—S2—N1 are 2.4134 (14) Å and 2.3701 (13) Å respectively. Complexation of O1 and O4 with zinc is reflected in the respective Si—O bond lengths: Si1—O1 and Si2—O4 are definitely longer then the rest of Si—O bonds.
Molecules of zinc thiolate and 2-propanol are linked via N—H···O and O—H···S hydrogen bonds to generate antiparallel chains along the c axis, as shown in Fig. 2. The tert-butyl groups on both sides of each chain prevent other interactions than hydrophobic between the chains.
The analogous penta-coordinated complex with 1-methylimidazole (which has a blocked N—H function) also has a tbp geometry (Dołęga Anna et al., 2004) but the molecules pack in crystal as discrete units.