In the title compound, C
4H
8N
3O
+·C
2HO
4−·H
2O, the asymmetric unit comprises one creatinium cation, one hydrogen oxalate anion and one water molecule. All non-H atoms lie on a crystallographic mirror plane and both the cation skeleton and the anion are therefore totally planar. In the crystal packing, an extended network of O—H
O and N—H
O hydrogen-bonding interactions results in the formation of two-dimensional sheets parallel to the
ac plane.
Supporting information
CCDC reference: 651363
Key indicators
- Single-crystal X-ray study
- T = 294 K
- Mean (C-C) = 0.002 Å
- R factor = 0.034
- wR factor = 0.097
- Data-to-parameter ratio = 8.5
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ?
PLAT088_ALERT_3_C Poor Data / Parameter Ratio .................... 8.48
PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 3.76
PLAT369_ALERT_2_C Long C(sp2)-C(sp2) Bond C9 - C10 ... 1.55 Ang.
Alert level G
FORMU01_ALERT_1_G There is a discrepancy between the atom counts in the
_chemical_formula_sum and _chemical_formula_moiety. This is
usually due to the moiety formula being in the wrong format.
Atom count from _chemical_formula_sum: C6 H11 N3 O6
Atom count from _chemical_formula_moiety:C6 H14 N3 O6
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
4 ALERT level C = Check and explain
1 ALERT level G = General alerts; check
2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
2 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
0 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
Data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: DIAMOND (Brandenburg & Putz, 2005) and SHELXTL/PC (Sheldrick, 1990); software used to prepare material for publication: SHELXL97.
Creatininium hydrogen oxalate monohydrate
top
Crystal data top
C4H8N3O+·C2HO4−·H2O | F(000) = 464 |
Mr = 221.18 | Dx = 1.514 Mg m−3 |
Orthorhombic, Pnma | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2n | Cell parameters from 5792 reflections |
a = 9.1728 (7) Å | θ = 2.5–27.8° |
b = 6.3520 (5) Å | µ = 0.14 mm−1 |
c = 16.6567 (12) Å | T = 294 K |
V = 970.51 (13) Å3 | Block, colourless |
Z = 4 | 0.21 × 0.18 × 0.10 mm |
Data collection top
Bruker SMART APEX CCD area-detector diffractometer | 895 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.018 |
Graphite monochromator | θmax = 25.0°, θmin = 2.5° |
ω scans | h = −10→10 |
6481 measured reflections | k = −7→7 |
933 independent reflections | l = −19→19 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.034 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.098 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.11 | w = 1/[σ2(Fo2) + (0.0614P)2 + 0.1548P] where P = (Fo2 + 2Fc2)/3 |
933 reflections | (Δ/σ)max < 0.001 |
110 parameters | Δρmax = 0.18 e Å−3 |
0 restraints | Δρmin = −0.23 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
C2 | 0.16471 (18) | 0.2500 | 0.54778 (9) | 0.0342 (4) | |
C4 | 0.34887 (18) | 0.2500 | 0.63692 (10) | 0.0389 (4) | |
C5 | 0.20624 (19) | 0.2500 | 0.68254 (10) | 0.0402 (4) | |
H5A | 0.1971 | 0.1255 | 0.7159 | 0.048* | 0.50 |
H5B | 0.1971 | 0.3745 | 0.7159 | 0.048* | 0.50 |
C7 | −0.05704 (19) | 0.2500 | 0.63194 (11) | 0.0435 (4) | |
H7A | −0.0789 | 0.3332 | 0.6785 | 0.065* | 0.50 |
H7B | −0.0899 | 0.1082 | 0.6403 | 0.065* | 0.50 |
H7C | −0.1056 | 0.3086 | 0.5860 | 0.065* | 0.50 |
N1 | 0.09882 (15) | 0.2500 | 0.61829 (8) | 0.0368 (4) | |
N3 | 0.31220 (16) | 0.2500 | 0.55718 (8) | 0.0376 (4) | |
H3N | 0.374 (3) | 0.2500 | 0.5171 (15) | 0.057 (6)* | |
N6 | 0.10137 (17) | 0.2500 | 0.47779 (9) | 0.0429 (4) | |
H6A | 0.004 (2) | 0.2500 | 0.4728 (12) | 0.040 (5)* | |
H6B | 0.160 (3) | 0.2500 | 0.4356 (15) | 0.059 (7)* | |
O8 | 0.47031 (15) | 0.2500 | 0.66429 (9) | 0.0559 (4) | |
C9 | 0.51525 (16) | 0.2500 | 0.27711 (10) | 0.0339 (4) | |
C10 | 0.42444 (17) | 0.2500 | 0.35543 (9) | 0.0383 (4) | |
O1 | 0.65463 (12) | 0.2500 | 0.28894 (8) | 0.0468 (4) | |
H1O | 0.702 (3) | 0.2500 | 0.2413 (19) | 0.075 (8)* | |
O2 | 0.45898 (13) | 0.2500 | 0.21184 (7) | 0.0532 (4) | |
O3 | 0.28895 (12) | 0.2500 | 0.34508 (7) | 0.0530 (4) | |
O4 | 0.48880 (12) | 0.2500 | 0.42032 (7) | 0.0499 (4) | |
O1W | 0.80123 (15) | 0.2500 | 0.43969 (9) | 0.0540 (4) | |
H1W | 0.704 (4) | 0.2500 | 0.4474 (17) | 0.092 (10)* | |
H2W | 0.803 (4) | 0.2500 | 0.382 (3) | 0.124 (12)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C2 | 0.0298 (8) | 0.0416 (8) | 0.0312 (8) | 0.000 | 0.0007 (6) | 0.000 |
C4 | 0.0336 (9) | 0.0477 (9) | 0.0353 (8) | 0.000 | −0.0035 (7) | 0.000 |
C5 | 0.0371 (10) | 0.0540 (9) | 0.0295 (8) | 0.000 | −0.0029 (6) | 0.000 |
C7 | 0.0315 (9) | 0.0622 (11) | 0.0368 (8) | 0.000 | 0.0057 (7) | 0.000 |
N1 | 0.0292 (7) | 0.0530 (8) | 0.0280 (7) | 0.000 | 0.0013 (5) | 0.000 |
N3 | 0.0278 (7) | 0.0541 (9) | 0.0310 (7) | 0.000 | 0.0030 (6) | 0.000 |
N6 | 0.0293 (7) | 0.0705 (10) | 0.0288 (7) | 0.000 | 0.0016 (6) | 0.000 |
O8 | 0.0347 (8) | 0.0859 (10) | 0.0471 (7) | 0.000 | −0.0083 (6) | 0.000 |
C9 | 0.0215 (7) | 0.0488 (9) | 0.0316 (8) | 0.000 | −0.0013 (6) | 0.000 |
C10 | 0.0224 (8) | 0.0610 (10) | 0.0314 (8) | 0.000 | 0.0003 (6) | 0.000 |
O1 | 0.0190 (6) | 0.0893 (10) | 0.0323 (7) | 0.000 | 0.0008 (5) | 0.000 |
O2 | 0.0252 (6) | 0.1044 (11) | 0.0300 (7) | 0.000 | −0.0024 (5) | 0.000 |
O3 | 0.0201 (6) | 0.1072 (12) | 0.0318 (6) | 0.000 | 0.0009 (5) | 0.000 |
O4 | 0.0264 (6) | 0.0940 (10) | 0.0295 (6) | 0.000 | −0.0015 (5) | 0.000 |
O1W | 0.0311 (8) | 0.0870 (11) | 0.0438 (8) | 0.000 | −0.0076 (6) | 0.000 |
Geometric parameters (Å, º) top
C2—N6 | 1.303 (2) | C7—H7C | 0.9600 |
C2—N1 | 1.321 (2) | N3—H3N | 0.88 (3) |
C2—N3 | 1.362 (2) | N6—H6A | 0.90 (2) |
C4—O8 | 1.204 (2) | N6—H6B | 0.88 (3) |
C4—N3 | 1.370 (2) | C9—O2 | 1.204 (2) |
C4—C5 | 1.513 (2) | C9—O1 | 1.2936 (19) |
C5—N1 | 1.455 (2) | C9—C10 | 1.548 (2) |
C5—H5A | 0.9700 | C10—O4 | 1.231 (2) |
C5—H5B | 0.9700 | C10—O3 | 1.255 (2) |
C7—N1 | 1.448 (2) | O1—H1O | 0.91 (3) |
C7—H7A | 0.9600 | O1W—H1W | 0.90 (3) |
C7—H7B | 0.9600 | O1W—H2W | 0.97 (4) |
| | | |
N6—C2—N1 | 126.28 (15) | C2—N1—C7 | 126.26 (14) |
N6—C2—N3 | 123.09 (15) | C2—N1—C5 | 110.13 (13) |
N1—C2—N3 | 110.63 (14) | C7—N1—C5 | 123.60 (14) |
O8—C4—N3 | 126.47 (17) | C2—N3—C4 | 110.81 (14) |
O8—C4—C5 | 127.59 (16) | C2—N3—H3N | 123.8 (16) |
N3—C4—C5 | 105.94 (13) | C4—N3—H3N | 125.4 (16) |
N1—C5—C4 | 102.49 (13) | C2—N6—H6A | 121.8 (12) |
N1—C5—H5A | 111.3 | C2—N6—H6B | 116.2 (17) |
C4—C5—H5A | 111.3 | H6A—N6—H6B | 122 (2) |
N1—C5—H5B | 111.3 | O2—C9—O1 | 124.16 (15) |
C4—C5—H5B | 111.3 | O2—C9—C10 | 122.05 (14) |
H5A—C5—H5B | 109.2 | O1—C9—C10 | 113.80 (13) |
N1—C7—H7A | 109.5 | O4—C10—O3 | 126.54 (15) |
N1—C7—H7B | 109.5 | O4—C10—C9 | 118.80 (14) |
H7A—C7—H7B | 109.5 | O3—C10—C9 | 114.66 (13) |
N1—C7—H7C | 109.5 | C9—O1—H1O | 110.1 (18) |
H7A—C7—H7C | 109.5 | H1W—O1W—H2W | 99 (3) |
H7B—C7—H7C | 109.5 | | |
| | | |
O8—C4—C5—N1 | 180.0 | N6—C2—N3—C4 | 180.0 |
N3—C4—C5—N1 | 0.0 | N1—C2—N3—C4 | 0.0 |
N6—C2—N1—C7 | 0.0 | O8—C4—N3—C2 | 180.0 |
N3—C2—N1—C7 | 180.0 | C5—C4—N3—C2 | 0.0 |
N6—C2—N1—C5 | 180.0 | O2—C9—C10—O4 | 180.0 |
N3—C2—N1—C5 | 0.0 | O1—C9—C10—O4 | 0.0 |
C4—C5—N1—C2 | 0.0 | O2—C9—C10—O3 | 0.0 |
C4—C5—N1—C7 | 180.0 | O1—C9—C10—O3 | 180.0 |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H2W···O2i | 0.97 (4) | 2.11 (4) | 2.9094 (19) | 138 (3) |
O1W—H2W···O1 | 0.97 (4) | 2.06 (4) | 2.8484 (18) | 138 (3) |
O1W—H1W···O4 | 0.90 (3) | 2.02 (3) | 2.8840 (18) | 159 (3) |
O1—H1O···O3i | 0.91 (3) | 1.64 (3) | 2.5498 (16) | 180 (3) |
N6—H6B···O3 | 0.88 (3) | 1.92 (3) | 2.8012 (18) | 179 (2) |
N6—H6A···O1Wii | 0.90 (2) | 1.94 (2) | 2.825 (2) | 169 (2) |
N3—H3N···O4 | 0.88 (3) | 1.92 (3) | 2.7966 (18) | 173 (2) |
Symmetry codes: (i) x+1/2, y, −z+1/2; (ii) x−1, y, z. |