Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807027997/bi2191sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807027997/bi2191Isup2.hkl |
CCDC reference: 654929
Key indicators
- Single-crystal X-ray study
- T = 291 K
- Mean (C-C)= 0.003 Å
- R factor = 0.050
- wR factor = 0.102
- Data-to-parameter ratio = 15.5
checkCIF/PLATON results
No syntax errors found No errors found in this datablock
Under a nitrogen atmosphere, a mixture of 4-amino-1,5-dimethyl-2-phenyl-1,2-dihydropyrazol-3-one (2.03 g, 10 mmol), Na2SO4 (3.0 g) and 5-methylthiophene-2-carboxaldehyde (1.26 g, 10 mmol) in absolute ethanol (30 ml) was refluxed for 6 h to yield a yellow precipitate. The product was collected by vacuum filtration and washed with ethanol. The crude solid was redissolved in CH2Cl2 (100 ml) and washed with water (2 × 10 ml) and brine (10 ml). After drying over Na2SO4, the solvent was removed under vacuum, and a yellow solid was isolated in 90% yield (2.80 g). Yellow single crystals suitable for X-ray analysis were grown from CH2Cl2 and absolute ethanol (4:1) by slow evaporation of the solvent at room temperature over a period of one week.
All H atoms were positioned geometrically and refined using a riding model (including free rotation about the local threefold axes of the methyl groups), with C—H = 0.93–0.96 Å and with Uiso(H) = 1.2Ueq(C) (1.5Ueq(C) for methyl groups).
Schiff bases have significant importance in chemistry, because they are potentially capable of forming stable complexes with metal ions (Yan et al., 2006). Schiff bases that have solvent-dependent UV-vis spectra (solvatochromicity) can be suitable NLO (non-linear optically active) materials (Alemi & Shaabani, 2000). Some chiral Schiff bases are also applied in the enantioselective oxidation of methyl phenyl sulfide (Kim & Shin, 1999).
In the structure of the title compound (Fig. 1), all bond lengths and angles have normal values. The molecule contains one benzene ring, C1–C6 (denoted A) and two five-membered rings N2/N1/C7—C9 (denoted B) and C13—C16/S1 (denoted C). Rings B and C are nearly coplanar, the dihedral angle between them being 9.23 (13)°. The C12=N3 bond length of 1.268 (3) Å is typical for a C=N double bond; it links rings B and C to form a conjugated system. Ring A is not part of the conjugated system, the dihedral angle between rings A and B being 53.29 (9)°.
There are π-π interactions between neighbouring molecules through the imine functionalities: the Cg1—Cg1i separation is 3.590 (3) Å, where Cg denotes the centroid of atoms C12 and N3 [symmetry code: (i) -x, -y, -z]. Through the π-π interaction, the neighbouring molecules form dimers (Fig. 2), which are connected through intermolecular C—H···O interactions (C14—H14···Oii, symmetry code: (ii) 1 - x, -y, -z) into chains running along the a axis (Fig. 2).
For examples of applications of Schiff bases, see: Alemi & Shaabani (2000); Kim & Shin (1999). A CuII complex of a comparable Schiff base molecule has been reported (Yan et al., 2006).
Data collection: SMART (Bruker, 2000); cell refinement: SAINT (Bruker, 2000); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Bruker, 2000); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL.
C17H17N3OS | Z = 2 |
Mr = 311.40 | F(000) = 328 |
Triclinic, P1 | Dx = 1.298 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.042 (4) Å | Cell parameters from 2812 reflections |
b = 8.664 (5) Å | θ = 2.5–27.8° |
c = 13.988 (8) Å | µ = 0.21 mm−1 |
α = 106.729 (7)° | T = 291 K |
β = 95.394 (7)° | Block, yellow |
γ = 99.568 (8)° | 0.30 × 0.24 × 0.22 mm |
V = 796.8 (8) Å3 |
Bruker SMART APEX CCD diffractometer | 3140 independent reflections |
Radiation source: sealed tube | 1998 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.035 |
φ and ω scans | θmax = 26.0°, θmin = 1.5° |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | h = −8→8 |
Tmin = 0.94, Tmax = 0.96 | k = −10→10 |
8047 measured reflections | l = −17→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.050 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.102 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.04P)2] where P = (Fo2 + 2Fc2)/3 |
3140 reflections | (Δ/σ)max < 0.001 |
202 parameters | Δρmax = 0.16 e Å−3 |
0 restraints | Δρmin = −0.17 e Å−3 |
C17H17N3OS | γ = 99.568 (8)° |
Mr = 311.40 | V = 796.8 (8) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.042 (4) Å | Mo Kα radiation |
b = 8.664 (5) Å | µ = 0.21 mm−1 |
c = 13.988 (8) Å | T = 291 K |
α = 106.729 (7)° | 0.30 × 0.24 × 0.22 mm |
β = 95.394 (7)° |
Bruker SMART APEX CCD diffractometer | 3140 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2000) | 1998 reflections with I > 2σ(I) |
Tmin = 0.94, Tmax = 0.96 | Rint = 0.035 |
8047 measured reflections |
R[F2 > 2σ(F2)] = 0.050 | 0 restraints |
wR(F2) = 0.102 | H-atom parameters constrained |
S = 1.02 | Δρmax = 0.16 e Å−3 |
3140 reflections | Δρmin = −0.17 e Å−3 |
202 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. Least-squares planes (x,y,z in crystal coordinates) and deviations from them (* indicates atom used to define plane) 2.9350 (0.0057) x + 7.0338 (0.0060) y - 6.6058 (0.0135) z = 1.5325 (0.0040) * -0.0027 (0.0013) C13 * 0.0001 (0.0015) C14 * 0.0034 (0.0016) C15 * -0.0046 (0.0013) C16 * 0.0036 (0.0010) S1 Rms deviation of fitted atoms = 0.0033 3.0685 (0.0065) x + 6.5656 (0.0067) y - 8.4118 (0.0119) z = 1.5741 (0.0028) Angle to previous plane (with approximate e.s.d.) = 9.23 (0.13) * 0.0236 (0.0012) C7 * 0.0020 (0.0012) C8 * -0.0275 (0.0012) C9 * -0.0404 (0.0012) N1 * 0.0424 (0.0012) N2 Rms deviation of fitted atoms = 0.0308 - 5.4111 (0.0052) x + 0.4922 (0.0083) y + 9.7421 (0.0108) z = 1.5837 (0.0060) Angle to previous plane (with approximate e.s.d.) = 53.29 (0.09) * -0.0062 (0.0015) C1 * 0.0107 (0.0015) C2 * -0.0067 (0.0017) C3 * -0.0018 (0.0018) C4 * 0.0064 (0.0017) C5 * -0.0024 (0.0015) C6 Rms deviation of fitted atoms = 0.0064 |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.2382 (3) | 0.5530 (2) | 0.26628 (15) | 0.0407 (5) | |
C2 | 0.3531 (3) | 0.5054 (3) | 0.33425 (16) | 0.0492 (5) | |
H2 | 0.3351 | 0.3956 | 0.3321 | 0.059* | |
C3 | 0.4955 (3) | 0.6234 (3) | 0.40559 (18) | 0.0573 (6) | |
H3 | 0.5758 | 0.5922 | 0.4502 | 0.069* | |
C4 | 0.5182 (4) | 0.7880 (3) | 0.4104 (2) | 0.0657 (7) | |
H4 | 0.6127 | 0.8670 | 0.4587 | 0.079* | |
C5 | 0.4005 (4) | 0.8342 (3) | 0.34351 (19) | 0.0603 (6) | |
H5 | 0.4154 | 0.9446 | 0.3474 | 0.072* | |
C6 | 0.2586 (3) | 0.7164 (3) | 0.26973 (17) | 0.0489 (5) | |
H6 | 0.1799 | 0.7472 | 0.2242 | 0.059* | |
C7 | 0.1688 (3) | 0.3090 (2) | 0.11286 (15) | 0.0415 (5) | |
C8 | 0.0216 (3) | 0.2627 (2) | 0.02558 (14) | 0.0398 (4) | |
C9 | −0.1188 (3) | 0.3556 (2) | 0.05033 (15) | 0.0415 (4) | |
C10 | −0.1957 (3) | 0.5374 (3) | 0.21270 (17) | 0.0532 (6) | |
H10A | −0.2793 | 0.5868 | 0.1776 | 0.080* | |
H10B | −0.1199 | 0.6201 | 0.2712 | 0.080* | |
H10C | −0.2733 | 0.4539 | 0.2332 | 0.080* | |
C11 | −0.3114 (3) | 0.3438 (3) | −0.01048 (18) | 0.0558 (6) | |
H11A | −0.4147 | 0.3204 | 0.0266 | 0.084* | |
H11B | −0.3280 | 0.2573 | −0.0734 | 0.084* | |
H11C | −0.3145 | 0.4464 | −0.0235 | 0.084* | |
C12 | 0.1536 (3) | 0.0752 (3) | −0.08877 (16) | 0.0481 (5) | |
H12 | 0.2465 | 0.0823 | −0.0350 | 0.058* | |
C13 | 0.1674 (3) | −0.0296 (3) | −0.18876 (16) | 0.0469 (5) | |
C14 | 0.3103 (3) | −0.1160 (3) | −0.21765 (18) | 0.0556 (6) | |
H14 | 0.4160 | −0.1185 | −0.1733 | 0.067* | |
C15 | 0.2785 (3) | −0.2008 (3) | −0.32260 (18) | 0.0552 (6) | |
H15 | 0.3629 | −0.2643 | −0.3538 | 0.066* | |
C16 | 0.1167 (3) | −0.1822 (3) | −0.37344 (17) | 0.0498 (5) | |
C17 | 0.0376 (4) | −0.2539 (4) | −0.48488 (19) | 0.0726 (7) | |
H17A | 0.1350 | −0.3005 | −0.5205 | 0.109* | |
H17B | 0.0040 | −0.1686 | −0.5102 | 0.109* | |
H17C | −0.0762 | −0.3381 | −0.4946 | 0.109* | |
N1 | 0.1036 (2) | 0.4266 (2) | 0.18842 (13) | 0.0435 (4) | |
N2 | −0.0651 (2) | 0.4632 (2) | 0.14565 (13) | 0.0435 (4) | |
N3 | 0.0206 (2) | 0.1574 (2) | −0.07154 (13) | 0.0444 (4) | |
O1 | 0.3281 (2) | 0.26705 (19) | 0.12588 (11) | 0.0546 (4) | |
S1 | −0.00437 (8) | −0.05443 (8) | −0.29243 (4) | 0.05310 (18) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0326 (10) | 0.0420 (10) | 0.0424 (11) | 0.0097 (8) | 0.0073 (8) | 0.0036 (9) |
C2 | 0.0442 (12) | 0.0528 (12) | 0.0512 (13) | 0.0157 (10) | 0.0017 (9) | 0.0151 (10) |
C3 | 0.0418 (13) | 0.0715 (16) | 0.0538 (14) | 0.0164 (11) | −0.0056 (10) | 0.0131 (12) |
C4 | 0.0456 (14) | 0.0673 (16) | 0.0669 (16) | 0.0049 (12) | −0.0048 (12) | 0.0018 (13) |
C5 | 0.0579 (15) | 0.0437 (12) | 0.0670 (16) | 0.0014 (11) | 0.0073 (12) | 0.0036 (11) |
C6 | 0.0489 (13) | 0.0492 (12) | 0.0477 (12) | 0.0147 (10) | 0.0074 (9) | 0.0112 (10) |
C7 | 0.0326 (10) | 0.0420 (10) | 0.0482 (12) | 0.0076 (8) | 0.0073 (8) | 0.0110 (9) |
C8 | 0.0337 (11) | 0.0444 (10) | 0.0391 (11) | 0.0071 (8) | 0.0058 (8) | 0.0099 (9) |
C9 | 0.0334 (10) | 0.0479 (11) | 0.0419 (11) | 0.0053 (8) | 0.0055 (8) | 0.0136 (9) |
C10 | 0.0388 (12) | 0.0599 (13) | 0.0589 (14) | 0.0180 (10) | 0.0129 (10) | 0.0091 (11) |
C11 | 0.0330 (12) | 0.0783 (16) | 0.0549 (14) | 0.0099 (11) | 0.0027 (9) | 0.0208 (12) |
C12 | 0.0434 (12) | 0.0503 (12) | 0.0460 (12) | 0.0079 (10) | 0.0044 (9) | 0.0096 (10) |
C13 | 0.0408 (11) | 0.0466 (12) | 0.0515 (13) | 0.0115 (9) | 0.0074 (9) | 0.0105 (10) |
C14 | 0.0510 (14) | 0.0553 (13) | 0.0582 (14) | 0.0202 (11) | 0.0026 (11) | 0.0106 (11) |
C15 | 0.0509 (14) | 0.0566 (13) | 0.0597 (14) | 0.0245 (11) | 0.0178 (11) | 0.0100 (11) |
C16 | 0.0474 (13) | 0.0499 (12) | 0.0475 (12) | 0.0124 (10) | 0.0074 (10) | 0.0063 (10) |
C17 | 0.0628 (16) | 0.0858 (19) | 0.0563 (15) | 0.0200 (14) | 0.0022 (12) | 0.0013 (14) |
N1 | 0.0323 (9) | 0.0471 (9) | 0.0450 (10) | 0.0104 (7) | −0.0008 (7) | 0.0054 (8) |
N2 | 0.0301 (9) | 0.0522 (10) | 0.0459 (10) | 0.0153 (7) | 0.0045 (7) | 0.0079 (8) |
N3 | 0.0399 (10) | 0.0456 (9) | 0.0438 (10) | 0.0065 (8) | 0.0094 (7) | 0.0081 (8) |
O1 | 0.0381 (8) | 0.0607 (9) | 0.0583 (10) | 0.0194 (7) | 0.0027 (7) | 0.0042 (8) |
S1 | 0.0431 (3) | 0.0625 (4) | 0.0508 (3) | 0.0231 (3) | 0.0049 (2) | 0.0068 (3) |
C1—C6 | 1.385 (3) | C10—H10B | 0.960 |
C1—C2 | 1.386 (3) | C10—H10C | 0.960 |
C1—N1 | 1.435 (3) | C11—H11A | 0.960 |
C2—C3 | 1.389 (3) | C11—H11B | 0.960 |
C2—H2 | 0.930 | C11—H11C | 0.960 |
C3—C4 | 1.389 (4) | C12—N3 | 1.268 (3) |
C3—H3 | 0.930 | C12—C13 | 1.454 (3) |
C4—C5 | 1.379 (4) | C12—H12 | 0.930 |
C4—H4 | 0.930 | C13—C14 | 1.375 (3) |
C5—C6 | 1.402 (3) | C13—S1 | 1.737 (2) |
C5—H5 | 0.930 | C14—C15 | 1.417 (3) |
C6—H6 | 0.930 | C14—H14 | 0.930 |
C7—O1 | 1.249 (2) | C15—C16 | 1.344 (3) |
C7—N1 | 1.411 (3) | C15—H15 | 0.930 |
C7—C8 | 1.438 (3) | C16—C17 | 1.513 (3) |
C8—C9 | 1.384 (3) | C16—S1 | 1.735 (2) |
C8—N3 | 1.400 (3) | C17—H17A | 0.960 |
C9—N2 | 1.365 (3) | C17—H17B | 0.960 |
C9—C11 | 1.503 (3) | C17—H17C | 0.960 |
C10—N2 | 1.466 (3) | N1—N2 | 1.404 (2) |
C10—H10A | 0.960 | ||
C6—C1—C2 | 121.4 (2) | C9—C11—H11B | 109.5 |
C6—C1—N1 | 120.60 (19) | H11A—C11—H11B | 109.5 |
C2—C1—N1 | 117.92 (18) | C9—C11—H11C | 109.5 |
C1—C2—C3 | 119.3 (2) | H11A—C11—H11C | 109.5 |
C1—C2—H2 | 120.3 | H11B—C11—H11C | 109.5 |
C3—C2—H2 | 120.3 | N3—C12—C13 | 123.0 (2) |
C4—C3—C2 | 120.2 (2) | N3—C12—H12 | 118.5 |
C4—C3—H3 | 119.9 | C13—C12—H12 | 118.5 |
C2—C3—H3 | 119.9 | C14—C13—C12 | 128.2 (2) |
C5—C4—C3 | 119.9 (2) | C14—C13—S1 | 110.38 (17) |
C5—C4—H4 | 120.0 | C12—C13—S1 | 121.38 (16) |
C3—C4—H4 | 120.0 | C13—C14—C15 | 112.4 (2) |
C4—C5—C6 | 120.7 (2) | C13—C14—H14 | 123.8 |
C4—C5—H5 | 119.6 | C15—C14—H14 | 123.8 |
C6—C5—H5 | 119.6 | C16—C15—C14 | 114.6 (2) |
C1—C6—C5 | 118.4 (2) | C16—C15—H15 | 122.7 |
C1—C6—H6 | 120.8 | C14—C15—H15 | 122.7 |
C5—C6—H6 | 120.8 | C15—C16—C17 | 129.1 (2) |
O1—C7—N1 | 122.89 (19) | C15—C16—S1 | 110.47 (17) |
O1—C7—C8 | 131.38 (19) | C17—C16—S1 | 120.48 (18) |
N1—C7—C8 | 105.67 (17) | C16—C17—H17A | 109.5 |
C9—C8—N3 | 123.41 (18) | C16—C17—H17B | 109.5 |
C9—C8—C7 | 107.40 (17) | H17A—C17—H17B | 109.5 |
N3—C8—C7 | 128.90 (18) | C16—C17—H17C | 109.5 |
N2—C9—C8 | 110.14 (17) | H17A—C17—H17C | 109.5 |
N2—C9—C11 | 121.05 (18) | H17B—C17—H17C | 109.5 |
C8—C9—C11 | 128.74 (19) | N2—N1—C7 | 108.63 (16) |
N2—C10—H10A | 109.5 | N2—N1—C1 | 119.75 (16) |
N2—C10—H10B | 109.5 | C7—N1—C1 | 121.40 (17) |
H10A—C10—H10B | 109.5 | C9—N2—N1 | 107.56 (15) |
N2—C10—H10C | 109.5 | C9—N2—C10 | 126.39 (17) |
H10A—C10—H10C | 109.5 | N1—N2—C10 | 118.71 (17) |
H10B—C10—H10C | 109.5 | C12—N3—C8 | 120.05 (18) |
C9—C11—H11A | 109.5 | C16—S1—C13 | 92.15 (11) |
Experimental details
Crystal data | |
Chemical formula | C17H17N3OS |
Mr | 311.40 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 291 |
a, b, c (Å) | 7.042 (4), 8.664 (5), 13.988 (8) |
α, β, γ (°) | 106.729 (7), 95.394 (7), 99.568 (8) |
V (Å3) | 796.8 (8) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.21 |
Crystal size (mm) | 0.30 × 0.24 × 0.22 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 2000) |
Tmin, Tmax | 0.94, 0.96 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 8047, 3140, 1998 |
Rint | 0.035 |
(sin θ/λ)max (Å−1) | 0.617 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.050, 0.102, 1.02 |
No. of reflections | 3140 |
No. of parameters | 202 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.16, −0.17 |
Computer programs: SMART (Bruker, 2000), SAINT (Bruker, 2000), SAINT, SHELXTL (Bruker, 2000), SHELXTL.
Schiff bases have significant importance in chemistry, because they are potentially capable of forming stable complexes with metal ions (Yan et al., 2006). Schiff bases that have solvent-dependent UV-vis spectra (solvatochromicity) can be suitable NLO (non-linear optically active) materials (Alemi & Shaabani, 2000). Some chiral Schiff bases are also applied in the enantioselective oxidation of methyl phenyl sulfide (Kim & Shin, 1999).
In the structure of the title compound (Fig. 1), all bond lengths and angles have normal values. The molecule contains one benzene ring, C1–C6 (denoted A) and two five-membered rings N2/N1/C7—C9 (denoted B) and C13—C16/S1 (denoted C). Rings B and C are nearly coplanar, the dihedral angle between them being 9.23 (13)°. The C12=N3 bond length of 1.268 (3) Å is typical for a C=N double bond; it links rings B and C to form a conjugated system. Ring A is not part of the conjugated system, the dihedral angle between rings A and B being 53.29 (9)°.
There are π-π interactions between neighbouring molecules through the imine functionalities: the Cg1—Cg1i separation is 3.590 (3) Å, where Cg denotes the centroid of atoms C12 and N3 [symmetry code: (i) -x, -y, -z]. Through the π-π interaction, the neighbouring molecules form dimers (Fig. 2), which are connected through intermolecular C—H···O interactions (C14—H14···Oii, symmetry code: (ii) 1 - x, -y, -z) into chains running along the a axis (Fig. 2).