Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807026979/hb2443sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807026979/hb2443Isup2.hkl |
CCDC reference: 654580
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean (C-C) = 0.005 Å
- R factor = 0.056
- wR factor = 0.152
- Data-to-parameter ratio = 13.6
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT026_ALERT_3_C Ratio Observed / Unique Reflections too Low .... 49 Perc. PLAT063_ALERT_3_C Crystal Probably too Large for Beam Size ....... 0.62 mm PLAT066_ALERT_1_C Predicted and Reported Transmissions Identical . ? PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds (x 1000) Ang ... 5 PLAT380_ALERT_4_C Check Incorrectly? Oriented X(sp2)-Methyl Moiety C3 PLAT380_ALERT_4_C Check Incorrectly? Oriented X(sp2)-Methyl Moiety C9 PLAT380_ALERT_4_C Check Incorrectly? Oriented X(sp2)-Methyl Moiety C10
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 7 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 3 ALERT type 3 Indicator that the structure quality may be low 3 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
8 mmol (0.8 ml) of 2,4-dimethyl-pyrrole and 4 mmol (1240 mg) (2-ethoxycarbonylmethoxy-4-formyl-phenoxy)-acetic acid ethyl ester were dissolved in 350 ml absolute DCM and 0.15 ml trifluoroacetic acid was added immediately under an nitrogen atmosphere. After being stirred at room temperature for 8 h, 320 ml DCM was evaporated, a solution of 2,3-dichloro-5,6-dicyano-benzoquinone (4 mmol) in DCM (30 ml) was added and stirred for half an hour, followed by injecting 74 mmol triethylamine (8 ml) into the dark residue. Then 75 mmol (12 ml) boron trifluoride ethyl ether complex was injected slowly. After stirring for 3 h, the solution was washed with an aqueous solution of NaHCO3, the organic layer was dried over Na2SO4, and the solvent was evaporated by reduced pressure.
Chromatography on a silica column was carried out and eluted with ethyl acetate/petroleum ether (1:4 v/v) mitxture. The collected red fraction was subsequently recrystallized from chloroform/hexane (1:4 v/v) to acquire 507 mg (yield 24%) of the title compound.
Red slabs of (I) were acquired after 7 weeks by slow evaporation of a DCM/hexane (1:2 v/v) solution.
The H atoms were geometrically placed (C—H = 0.93–0.96 Å) and refined as riding with Uiso(H) = 1.5Ueq(C) (methyl) or 1.2Ueq(C) (aromatic).
Boron-dipyrromethene (BODIPY) dyes are well known as fluorescence labels and biomolecule sensors (Wu et al., 2005; Trieflinger et al., 2005; Dost et al., 2006). So As part of our ongoing studies of BOPIPY species (Qin et al., 2005; Yu et al., 2007) the structure of the title compound, (I), (Fig. 1) is now reported.
The BODIPY skeleton formed by the three conjugated heterocyclic rings is almost coplanar, with an r.m.s. deviation of 0.061 (3) Å; the maximum deviations from the mean plane are 0.113 (3) Å for B and 0.094 (3) Å for C4. Perhaps due to the presence of the C3 and C10 methyl groups, the benzene ring is almost perpendicular to the BODIPY mean plane, with the dihedral angle is 82.3 (1)°. The B—N distances in the central ring are almost identical, indicating delocaization of the formal positive charge on one of the N atoms (Table 1).
For background, see: Wu et al. (2005); Trieflinger et al. (2005); Dost et al. (2006); Qin et al. (2005); Yu et al. (2007).
Data collection: APEX2 (Bruker, 2005); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 1997); software used to prepare material for publication: SHELXTL.
C27H31BF2N2O6 | F(000) = 1112 |
Mr = 528.35 | Dx = 1.315 Mg m−3 |
Monoclinic, P21/n | Melting point: 392K K |
Hall symbol: -P 2yn | Mo Kα radiation, λ = 0.71073 Å |
a = 9.6068 (6) Å | Cell parameters from 6052 reflections |
b = 7.5418 (6) Å | θ = 2.2–27.5° |
c = 36.896 (2) Å | µ = 0.10 mm−1 |
β = 93.231 (5)° | T = 298 K |
V = 2669.0 (3) Å3 | Slab, red |
Z = 4 | 0.62 × 0.21 × 0.08 mm |
Bruker SMART APEX II CCD diffractometer | 4681 independent reflections |
Radiation source: fine-focus sealed tube | 2283 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.079 |
Detector resolution: 3.53 pixels mm-1 | θmax = 25.0°, θmin = 2.2° |
ω scans | h = −11→11 |
Absorption correction: multi-scan (SADABS; Bruker, 1997) | k = −8→8 |
Tmin = 0.940, Tmax = 0.992 | l = −43→43 |
12387 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.056 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.152 | H-atom parameters constrained |
S = 0.93 | w = 1/[σ2(Fo2) + (0.0659P)2] where P = (Fo2 + 2Fc2)/3 |
4681 reflections | (Δ/σ)max < 0.001 |
343 parameters | Δρmax = 0.25 e Å−3 |
0 restraints | Δρmin = −0.20 e Å−3 |
C27H31BF2N2O6 | V = 2669.0 (3) Å3 |
Mr = 528.35 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 9.6068 (6) Å | µ = 0.10 mm−1 |
b = 7.5418 (6) Å | T = 298 K |
c = 36.896 (2) Å | 0.62 × 0.21 × 0.08 mm |
β = 93.231 (5)° |
Bruker SMART APEX II CCD diffractometer | 4681 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 1997) | 2283 reflections with I > 2σ(I) |
Tmin = 0.940, Tmax = 0.992 | Rint = 0.079 |
12387 measured reflections |
R[F2 > 2σ(F2)] = 0.056 | 0 restraints |
wR(F2) = 0.152 | H-atom parameters constrained |
S = 0.93 | Δρmax = 0.25 e Å−3 |
4681 reflections | Δρmin = −0.20 e Å−3 |
343 parameters |
Experimental. Mp.: 392–393 K(uncorrected); 1H NMR (CDCl3, 400 MHz): δ 6.961 (d, 1H, Ar—H, J = 8.4 Hz), 6.840 (dd, 1H, Ar—H, J = 8.0 Hz), 6.746 (d, 1H, Ar—H, J = 1.2 Hz), 5.962 (s, 2H, pyrrole-H), 4.763 (s, 2H, methoxy-H), 4.698 (s, 2H, methoxy-H), 4.287–4.234 (m, 2H, ethoxy-H), 4.222–4.169 (m, 2H, ethoxy-H), 2.530 (s, 6H, pyrrole-CH3), 1.430 (s, 6H, pyrrole-CH3), 1.278 (t, 3H, ethyl ester-CH3), 1.242 (t, 3H, ethyl ester-CH3); 13C NMR (CDCl3, 400 MHz): δ 168.667, 168.464, 155.704, 148.751, 148.432, 143.270, 140.728, 131.649, 128.818, 121.834, 121.341, 115.443, 114.494, 66.679, 66.292, 61.616, 61.555, 14.720, 14.500, 14.280, 14.211; HRMS(TOF MS EI+): Found: 528.2246, calculated: 528.2243. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O6 | −0.1822 (2) | 0.8666 (3) | 0.06347 (5) | 0.0579 (6) | |
O5 | −0.00951 (19) | 1.0920 (3) | 0.04268 (5) | 0.0507 (6) | |
O4 | 0.2203 (2) | 0.9416 (3) | 0.02309 (5) | 0.0577 (6) | |
F2 | 0.5394 (2) | 1.1742 (3) | 0.24401 (5) | 0.0815 (7) | |
C27 | 0.1234 (3) | 1.0922 (4) | 0.10128 (8) | 0.0458 (8) | |
H27A | 0.1871 | 1.1750 | 0.0936 | 0.055* | |
O3 | 0.3274 (2) | 1.1992 (4) | 0.01361 (6) | 0.0743 (8) | |
C26 | 0.0153 (3) | 1.0365 (4) | 0.07791 (7) | 0.0424 (8) | |
N2 | 0.3670 (3) | 1.2976 (4) | 0.20215 (7) | 0.0535 (7) | |
C25 | −0.0805 (3) | 0.9139 (4) | 0.08945 (8) | 0.0467 (8) | |
N1 | 0.4885 (3) | 1.0196 (4) | 0.18797 (6) | 0.0534 (7) | |
F1 | 0.61150 (19) | 1.2953 (3) | 0.19255 (6) | 0.0860 (7) | |
O2 | −0.3397 (2) | 0.4649 (3) | 0.08974 (7) | 0.0765 (8) | |
C24 | 0.1374 (3) | 1.0247 (4) | 0.13646 (8) | 0.0452 (8) | |
O1 | −0.1254 (2) | 0.5049 (4) | 0.07078 (7) | 0.0823 (8) | |
C23 | 0.2524 (3) | 1.2409 (5) | 0.17989 (8) | 0.0482 (8) | |
C22 | −0.0683 (3) | 0.8504 (5) | 0.12437 (8) | 0.0547 (9) | |
H22A | −0.1333 | 0.7701 | 0.1324 | 0.066* | |
C21 | 0.2249 (3) | 1.1173 (5) | 0.02085 (8) | 0.0536 (9) | |
C20 | −0.2360 (4) | 0.5594 (5) | 0.07760 (9) | 0.0566 (9) | |
C19 | 0.2586 (3) | 1.0815 (4) | 0.16097 (7) | 0.0443 (8) | |
C18 | −0.2858 (3) | 0.7483 (5) | 0.07327 (9) | 0.0569 (9) | |
H18A | −0.3620 | 0.7518 | 0.0549 | 0.068* | |
H18B | −0.3217 | 0.7874 | 0.0960 | 0.068* | |
C17 | 0.0898 (3) | 1.2038 (5) | 0.02750 (8) | 0.0539 (9) | |
H17A | 0.1075 | 1.3036 | 0.0437 | 0.065* | |
H17B | 0.0502 | 1.2501 | 0.0047 | 0.065* | |
C16 | 0.3740 (3) | 0.9695 (5) | 0.16491 (7) | 0.0488 (8) | |
C15 | 0.0413 (3) | 0.9063 (5) | 0.14764 (8) | 0.0543 (9) | |
H15A | 0.0494 | 0.8625 | 0.1712 | 0.065* | |
C14 | 0.4054 (3) | 0.8035 (5) | 0.14945 (8) | 0.0544 (9) | |
C13 | 0.1425 (3) | 1.3670 (5) | 0.18329 (9) | 0.0575 (9) | |
C12 | 0.5842 (3) | 0.8895 (6) | 0.18741 (9) | 0.0629 (10) | |
C11 | 0.5356 (4) | 0.7565 (5) | 0.16382 (10) | 0.0667 (11) | |
H11A | 0.5832 | 0.6530 | 0.1586 | 0.080* | |
C10 | 0.3210 (4) | 0.6941 (5) | 0.12208 (9) | 0.0720 (11) | |
H10A | 0.3709 | 0.5874 | 0.1170 | 0.108* | |
H10B | 0.3050 | 0.7609 | 0.1001 | 0.108* | |
H10C | 0.2331 | 0.6641 | 0.1317 | 0.108* | |
C9 | 0.4263 (4) | 1.5517 (6) | 0.24383 (9) | 0.0861 (13) | |
H9A | 0.5151 | 1.4933 | 0.2464 | 0.129* | |
H9B | 0.3863 | 1.5578 | 0.2671 | 0.129* | |
H9C | 0.4384 | 1.6695 | 0.2347 | 0.129* | |
C8 | 0.7207 (3) | 0.8948 (6) | 0.20889 (11) | 0.0952 (15) | |
H8A | 0.7273 | 1.0029 | 0.2227 | 0.143* | |
H8B | 0.7954 | 0.8897 | 0.1927 | 0.143* | |
H8C | 0.7270 | 0.7953 | 0.2251 | 0.143* | |
C7 | 0.3452 (4) | 0.8467 (6) | 0.01443 (12) | 0.0840 (13) | |
H7A | 0.4207 | 0.8733 | 0.0321 | 0.101* | |
H7B | 0.3735 | 0.8809 | −0.0094 | 0.101* | |
C6 | −0.4550 (4) | 0.1959 (6) | 0.09749 (12) | 0.0955 (14) | |
H6A | −0.4454 | 0.0703 | 0.1011 | 0.143* | |
H6B | −0.5098 | 0.2180 | 0.0754 | 0.143* | |
H6C | −0.5004 | 0.2470 | 0.1175 | 0.143* | |
C5 | 0.3318 (4) | 1.4503 (5) | 0.21813 (9) | 0.0628 (10) | |
C4 | 0.1942 (4) | 1.4927 (5) | 0.20706 (9) | 0.0663 (10) | |
H4A | 0.1455 | 1.5912 | 0.2147 | 0.080* | |
B | 0.5065 (4) | 1.1986 (6) | 0.20735 (10) | 0.0595 (11) | |
C3 | −0.0018 (4) | 1.3661 (5) | 0.16650 (10) | 0.0809 (12) | |
H3A | −0.0504 | 1.4699 | 0.1740 | 0.121* | |
H3B | −0.0498 | 1.2621 | 0.1741 | 0.121* | |
H3C | 0.0015 | 1.3657 | 0.1405 | 0.121* | |
C2 | −0.3184 (4) | 0.2748 (5) | 0.09514 (12) | 0.0856 (13) | |
H2A | −0.2714 | 0.2244 | 0.0749 | 0.103* | |
H2B | −0.2618 | 0.2531 | 0.1173 | 0.103* | |
C1 | 0.3110 (5) | 0.6528 (6) | 0.01509 (13) | 0.1050 (15) | |
H1A | 0.3918 | 0.5853 | 0.0095 | 0.158* | |
H1B | 0.2364 | 0.6281 | −0.0026 | 0.158* | |
H1C | 0.2829 | 0.6207 | 0.0388 | 0.158* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O6 | 0.0483 (12) | 0.0693 (17) | 0.0549 (13) | −0.0203 (12) | −0.0077 (11) | 0.0065 (12) |
O5 | 0.0440 (11) | 0.0644 (17) | 0.0433 (12) | −0.0055 (11) | −0.0022 (9) | 0.0107 (11) |
O4 | 0.0510 (13) | 0.0592 (19) | 0.0629 (14) | 0.0028 (13) | 0.0033 (11) | 0.0007 (12) |
F2 | 0.0780 (13) | 0.1115 (19) | 0.0524 (12) | −0.0054 (13) | −0.0198 (10) | −0.0045 (11) |
C27 | 0.0427 (16) | 0.048 (2) | 0.0469 (18) | −0.0087 (16) | 0.0020 (14) | 0.0028 (16) |
O3 | 0.0523 (14) | 0.085 (2) | 0.0860 (17) | −0.0195 (14) | 0.0077 (12) | 0.0007 (15) |
C26 | 0.0389 (15) | 0.045 (2) | 0.0430 (18) | 0.0013 (16) | −0.0003 (14) | 0.0030 (16) |
N2 | 0.0592 (17) | 0.055 (2) | 0.0455 (15) | −0.0085 (15) | −0.0056 (13) | −0.0067 (14) |
C25 | 0.0404 (16) | 0.051 (2) | 0.0485 (19) | −0.0083 (16) | −0.0019 (15) | 0.0019 (16) |
N1 | 0.0473 (15) | 0.063 (2) | 0.0497 (15) | 0.0006 (15) | −0.0027 (13) | 0.0047 (15) |
F1 | 0.0632 (12) | 0.0949 (18) | 0.1007 (16) | −0.0268 (13) | 0.0126 (11) | −0.0043 (13) |
O2 | 0.0625 (15) | 0.0504 (18) | 0.119 (2) | −0.0049 (13) | 0.0233 (14) | 0.0027 (15) |
C24 | 0.0443 (17) | 0.049 (2) | 0.0424 (18) | 0.0000 (17) | 0.0010 (14) | −0.0006 (16) |
O1 | 0.0527 (14) | 0.078 (2) | 0.117 (2) | 0.0019 (14) | 0.0122 (14) | −0.0158 (16) |
C23 | 0.0500 (18) | 0.053 (2) | 0.0415 (18) | −0.0021 (18) | −0.0016 (15) | 0.0006 (17) |
C22 | 0.0516 (18) | 0.063 (3) | 0.049 (2) | −0.0173 (18) | 0.0011 (16) | 0.0040 (18) |
C21 | 0.051 (2) | 0.059 (3) | 0.051 (2) | −0.006 (2) | −0.0065 (16) | 0.0029 (19) |
C20 | 0.0440 (19) | 0.062 (3) | 0.063 (2) | −0.004 (2) | −0.0056 (17) | −0.0109 (19) |
C19 | 0.0437 (17) | 0.051 (2) | 0.0376 (17) | −0.0056 (16) | −0.0003 (14) | 0.0027 (16) |
C18 | 0.0426 (17) | 0.066 (3) | 0.062 (2) | −0.0160 (19) | −0.0021 (16) | 0.0035 (19) |
C17 | 0.0470 (18) | 0.058 (2) | 0.056 (2) | −0.0039 (18) | 0.0019 (16) | 0.0113 (18) |
C16 | 0.0457 (17) | 0.059 (3) | 0.0411 (17) | −0.0051 (18) | −0.0008 (14) | 0.0038 (17) |
C15 | 0.0577 (19) | 0.064 (3) | 0.0411 (18) | −0.0140 (19) | 0.0001 (16) | 0.0066 (16) |
C14 | 0.057 (2) | 0.056 (3) | 0.051 (2) | 0.0013 (19) | 0.0070 (16) | 0.0000 (18) |
C13 | 0.059 (2) | 0.060 (3) | 0.054 (2) | 0.000 (2) | 0.0037 (17) | 0.0042 (19) |
C12 | 0.056 (2) | 0.076 (3) | 0.056 (2) | 0.008 (2) | 0.0037 (18) | 0.012 (2) |
C11 | 0.066 (2) | 0.067 (3) | 0.067 (2) | 0.015 (2) | 0.0134 (19) | 0.008 (2) |
C10 | 0.086 (3) | 0.064 (3) | 0.065 (2) | −0.002 (2) | 0.007 (2) | −0.011 (2) |
C9 | 0.113 (3) | 0.091 (3) | 0.054 (2) | −0.027 (3) | −0.007 (2) | −0.019 (2) |
C8 | 0.057 (2) | 0.134 (4) | 0.093 (3) | 0.017 (3) | −0.017 (2) | 0.006 (3) |
C7 | 0.059 (2) | 0.089 (4) | 0.103 (3) | 0.014 (2) | 0.003 (2) | −0.015 (3) |
C6 | 0.103 (3) | 0.067 (3) | 0.117 (4) | −0.027 (3) | 0.017 (3) | 0.001 (3) |
C5 | 0.079 (3) | 0.064 (3) | 0.0453 (19) | −0.010 (2) | 0.0061 (18) | −0.0028 (19) |
C4 | 0.087 (3) | 0.055 (3) | 0.058 (2) | 0.010 (2) | 0.010 (2) | −0.006 (2) |
B | 0.050 (2) | 0.079 (4) | 0.050 (2) | −0.010 (2) | 0.0032 (19) | −0.003 (2) |
C3 | 0.069 (2) | 0.082 (3) | 0.090 (3) | 0.017 (2) | −0.005 (2) | 0.002 (2) |
C2 | 0.082 (3) | 0.048 (3) | 0.126 (4) | −0.002 (2) | −0.003 (2) | −0.002 (2) |
C1 | 0.122 (4) | 0.069 (4) | 0.123 (4) | 0.022 (3) | 0.002 (3) | −0.018 (3) |
B—N1 | 1.533 (5) | C16—C14 | 1.415 (5) |
B—N2 | 1.537 (5) | C15—H15A | 0.9300 |
B—F1 | 1.382 (4) | C14—C11 | 1.377 (4) |
B—F2 | 1.384 (4) | C14—C10 | 1.506 (4) |
O6—C25 | 1.377 (3) | C13—C4 | 1.366 (5) |
O6—C18 | 1.399 (3) | C13—C3 | 1.486 (4) |
O5—C26 | 1.373 (3) | C12—C11 | 1.392 (5) |
O5—C17 | 1.413 (3) | C12—C8 | 1.494 (4) |
O4—C21 | 1.328 (4) | C11—H11A | 0.9300 |
O4—C7 | 1.448 (4) | C10—H10A | 0.9600 |
C27—C26 | 1.377 (4) | C10—H10B | 0.9600 |
C27—C24 | 1.394 (4) | C10—H10C | 0.9600 |
C27—H27A | 0.9300 | C9—C5 | 1.487 (5) |
O3—C21 | 1.206 (4) | C9—H9A | 0.9600 |
C26—C25 | 1.389 (4) | C9—H9B | 0.9600 |
N2—C5 | 1.346 (4) | C9—H9C | 0.9600 |
N2—C23 | 1.402 (4) | C8—H8A | 0.9600 |
C25—C22 | 1.373 (4) | C8—H8B | 0.9600 |
N1—C12 | 1.345 (4) | C8—H8C | 0.9600 |
N1—C16 | 1.404 (4) | C7—C1 | 1.499 (5) |
O2—C20 | 1.323 (4) | C7—H7A | 0.9700 |
O2—C2 | 1.461 (4) | C7—H7B | 0.9700 |
C24—C15 | 1.365 (4) | C6—C2 | 1.448 (5) |
C24—C19 | 1.496 (4) | C6—H6A | 0.9600 |
O1—C20 | 1.180 (4) | C6—H6B | 0.9600 |
C23—C19 | 1.393 (4) | C6—H6C | 0.9600 |
C23—C13 | 1.432 (4) | C5—C4 | 1.398 (5) |
C22—C15 | 1.386 (4) | C4—H4A | 0.9300 |
C22—H22A | 0.9300 | C3—H3A | 0.9600 |
C21—C17 | 1.485 (4) | C3—H3B | 0.9600 |
C20—C18 | 1.508 (5) | C3—H3C | 0.9600 |
C19—C16 | 1.395 (4) | C2—H2A | 0.9700 |
C18—H18A | 0.9700 | C2—H2B | 0.9700 |
C18—H18B | 0.9700 | C1—H1A | 0.9600 |
C17—H17A | 0.9700 | C1—H1B | 0.9600 |
C17—H17B | 0.9700 | C1—H1C | 0.9600 |
C25—O6—C18 | 118.2 (2) | C14—C11—C12 | 108.7 (3) |
C26—O5—C17 | 118.1 (2) | C14—C11—H11A | 125.7 |
C21—O4—C7 | 116.6 (3) | C12—C11—H11A | 125.7 |
C26—C27—C24 | 120.1 (3) | C14—C10—H10A | 109.5 |
C26—C27—H27A | 119.9 | C14—C10—H10B | 109.5 |
C24—C27—H27A | 119.9 | H10A—C10—H10B | 109.5 |
O5—C26—C27 | 125.8 (3) | C14—C10—H10C | 109.5 |
O5—C26—C25 | 114.2 (2) | H10A—C10—H10C | 109.5 |
C27—C26—C25 | 120.0 (3) | H10B—C10—H10C | 109.5 |
C5—N2—C23 | 108.0 (3) | C5—C9—H9A | 109.5 |
C5—N2—B | 126.9 (3) | C5—C9—H9B | 109.5 |
C23—N2—B | 125.1 (3) | H9A—C9—H9B | 109.5 |
C22—C25—O6 | 125.6 (3) | C5—C9—H9C | 109.5 |
C22—C25—C26 | 119.8 (3) | H9A—C9—H9C | 109.5 |
O6—C25—C26 | 114.6 (3) | H9B—C9—H9C | 109.5 |
C12—N1—C16 | 107.9 (3) | C12—C8—H8A | 109.5 |
C12—N1—B | 126.2 (3) | C12—C8—H8B | 109.5 |
C16—N1—B | 125.7 (3) | H8A—C8—H8B | 109.5 |
C20—O2—C2 | 118.2 (3) | C12—C8—H8C | 109.5 |
C15—C24—C27 | 119.2 (3) | H8A—C8—H8C | 109.5 |
C15—C24—C19 | 121.4 (3) | H8B—C8—H8C | 109.5 |
C27—C24—C19 | 119.3 (3) | O4—C7—C1 | 107.1 (3) |
C19—C23—N2 | 120.1 (3) | O4—C7—H7A | 110.3 |
C19—C23—C13 | 132.0 (3) | C1—C7—H7A | 110.3 |
N2—C23—C13 | 107.8 (3) | O4—C7—H7B | 110.3 |
C25—C22—C15 | 119.8 (3) | C1—C7—H7B | 110.3 |
C25—C22—H22A | 120.1 | H7A—C7—H7B | 108.6 |
C15—C22—H22A | 120.1 | C2—C6—H6A | 109.5 |
O3—C21—O4 | 123.7 (3) | C2—C6—H6B | 109.5 |
O3—C21—C17 | 123.0 (4) | H6A—C6—H6B | 109.5 |
O4—C21—C17 | 113.3 (3) | C2—C6—H6C | 109.5 |
O1—C20—O2 | 126.1 (4) | H6A—C6—H6C | 109.5 |
O1—C20—C18 | 126.2 (3) | H6B—C6—H6C | 109.5 |
O2—C20—C18 | 107.7 (3) | N2—C5—C4 | 108.9 (3) |
C23—C19—C16 | 121.8 (3) | N2—C5—C9 | 124.1 (3) |
C23—C19—C24 | 119.7 (3) | C4—C5—C9 | 127.0 (4) |
C16—C19—C24 | 118.5 (3) | C13—C4—C5 | 109.4 (3) |
O6—C18—C20 | 113.8 (3) | C13—C4—H4A | 125.3 |
O6—C18—H18A | 108.8 | C5—C4—H4A | 125.3 |
C20—C18—H18A | 108.8 | F1—B—F2 | 108.9 (3) |
O6—C18—H18B | 108.8 | F1—B—N1 | 110.3 (3) |
C20—C18—H18B | 108.8 | F2—B—N1 | 110.7 (3) |
H18A—C18—H18B | 107.7 | F1—B—N2 | 110.2 (3) |
O5—C17—C21 | 114.8 (3) | F2—B—N2 | 109.6 (3) |
O5—C17—H17A | 108.6 | N1—B—N2 | 107.2 (3) |
C21—C17—H17A | 108.6 | C13—C3—H3A | 109.5 |
O5—C17—H17B | 108.6 | C13—C3—H3B | 109.5 |
C21—C17—H17B | 108.6 | H3A—C3—H3B | 109.5 |
H17A—C17—H17B | 107.5 | C13—C3—H3C | 109.5 |
C19—C16—N1 | 119.4 (3) | H3A—C3—H3C | 109.5 |
C19—C16—C14 | 132.9 (3) | H3B—C3—H3C | 109.5 |
N1—C16—C14 | 107.7 (3) | C6—C2—O2 | 106.9 (3) |
C24—C15—C22 | 121.0 (3) | C6—C2—H2A | 110.3 |
C24—C15—H15A | 119.5 | O2—C2—H2A | 110.3 |
C22—C15—H15A | 119.5 | C6—C2—H2B | 110.3 |
C11—C14—C16 | 106.4 (3) | O2—C2—H2B | 110.3 |
C11—C14—C10 | 124.1 (4) | H2A—C2—H2B | 108.6 |
C16—C14—C10 | 129.5 (3) | C7—C1—H1A | 109.5 |
C4—C13—C23 | 105.9 (3) | C7—C1—H1B | 109.5 |
C4—C13—C3 | 124.6 (3) | H1A—C1—H1B | 109.5 |
C23—C13—C3 | 129.5 (3) | C7—C1—H1C | 109.5 |
N1—C12—C11 | 109.3 (3) | H1A—C1—H1C | 109.5 |
N1—C12—C8 | 123.5 (4) | H1B—C1—H1C | 109.5 |
C11—C12—C8 | 127.2 (4) | ||
C17—O5—C26—C27 | 6.0 (4) | B—N1—C16—C14 | 173.3 (3) |
C17—O5—C26—C25 | −174.1 (3) | C27—C24—C15—C22 | 1.1 (5) |
C24—C27—C26—O5 | −179.7 (3) | C19—C24—C15—C22 | −178.0 (3) |
C24—C27—C26—C25 | 0.5 (5) | C25—C22—C15—C24 | 0.3 (5) |
C18—O6—C25—C22 | 2.3 (5) | C19—C16—C14—C11 | −179.7 (3) |
C18—O6—C25—C26 | −177.8 (3) | N1—C16—C14—C11 | 0.9 (3) |
O5—C26—C25—C22 | −178.9 (3) | C19—C16—C14—C10 | 1.6 (6) |
C27—C26—C25—C22 | 0.9 (5) | N1—C16—C14—C10 | −177.7 (3) |
O5—C26—C25—O6 | 1.1 (4) | C19—C23—C13—C4 | 176.6 (3) |
C27—C26—C25—O6 | −179.0 (3) | N2—C23—C13—C4 | 0.0 (4) |
C26—C27—C24—C15 | −1.5 (5) | C19—C23—C13—C3 | −1.2 (6) |
C26—C27—C24—C19 | 177.6 (3) | N2—C23—C13—C3 | −177.7 (3) |
C5—N2—C23—C19 | −177.7 (3) | C16—N1—C12—C11 | 1.2 (4) |
B—N2—C23—C19 | 1.5 (5) | B—N1—C12—C11 | −173.4 (3) |
C5—N2—C23—C13 | −0.7 (4) | C16—N1—C12—C8 | −179.6 (3) |
B—N2—C23—C13 | 178.5 (3) | B—N1—C12—C8 | 5.7 (5) |
O6—C25—C22—C15 | 178.6 (3) | C16—C14—C11—C12 | −0.2 (4) |
C26—C25—C22—C15 | −1.3 (5) | C10—C14—C11—C12 | 178.5 (3) |
C7—O4—C21—O3 | −3.2 (5) | N1—C12—C11—C14 | −0.6 (4) |
C7—O4—C21—C17 | 175.8 (3) | C8—C12—C11—C14 | −179.7 (3) |
C2—O2—C20—O1 | −0.6 (5) | C21—O4—C7—C1 | −174.3 (3) |
C2—O2—C20—C18 | 178.2 (3) | C23—N2—C5—C4 | 1.1 (4) |
N2—C23—C19—C16 | 3.5 (5) | B—N2—C5—C4 | −178.1 (3) |
C13—C23—C19—C16 | −172.7 (3) | C23—N2—C5—C9 | 180.0 (3) |
N2—C23—C19—C24 | −178.3 (3) | B—N2—C5—C9 | 0.8 (5) |
C13—C23—C19—C24 | 5.5 (5) | C23—C13—C4—C5 | 0.6 (4) |
C15—C24—C19—C23 | −98.2 (4) | C3—C13—C4—C5 | 178.5 (3) |
C27—C24—C19—C23 | 82.7 (4) | N2—C5—C4—C13 | −1.1 (4) |
C15—C24—C19—C16 | 80.1 (4) | C9—C5—C4—C13 | −180.0 (3) |
C27—C24—C19—C16 | −99.0 (3) | C12—N1—B—F1 | 63.3 (4) |
C25—O6—C18—C20 | −73.6 (4) | C16—N1—B—F1 | −110.3 (3) |
O1—C20—C18—O6 | −6.4 (5) | C12—N1—B—F2 | −57.2 (4) |
O2—C20—C18—O6 | 174.9 (3) | C16—N1—B—F2 | 129.1 (3) |
C26—O5—C17—C21 | 69.4 (4) | C12—N1—B—N2 | −176.7 (3) |
O3—C21—C17—O5 | −167.7 (3) | C16—N1—B—N2 | 9.6 (4) |
O4—C21—C17—O5 | 13.3 (4) | C5—N2—B—F1 | −68.2 (4) |
C23—C19—C16—N1 | −1.3 (4) | C23—N2—B—F1 | 112.8 (4) |
C24—C19—C16—N1 | −179.5 (3) | C5—N2—B—F2 | 51.7 (5) |
C23—C19—C16—C14 | 179.4 (3) | C23—N2—B—F2 | −127.4 (3) |
C24—C19—C16—C14 | 1.2 (5) | C5—N2—B—N1 | 171.8 (3) |
C12—N1—C16—C19 | 179.2 (3) | C23—N2—B—N1 | −7.2 (4) |
B—N1—C16—C19 | −6.1 (5) | C20—O2—C2—C6 | −162.9 (3) |
C12—N1—C16—C14 | −1.3 (3) |
Experimental details
Crystal data | |
Chemical formula | C27H31BF2N2O6 |
Mr | 528.35 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 298 |
a, b, c (Å) | 9.6068 (6), 7.5418 (6), 36.896 (2) |
β (°) | 93.231 (5) |
V (Å3) | 2669.0 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.62 × 0.21 × 0.08 |
Data collection | |
Diffractometer | Bruker SMART APEX II CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 1997) |
Tmin, Tmax | 0.940, 0.992 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 12387, 4681, 2283 |
Rint | 0.079 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.056, 0.152, 0.93 |
No. of reflections | 4681 |
No. of parameters | 343 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.25, −0.20 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2001), SAINT, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL (Bruker, 1997), SHELXTL.
Boron-dipyrromethene (BODIPY) dyes are well known as fluorescence labels and biomolecule sensors (Wu et al., 2005; Trieflinger et al., 2005; Dost et al., 2006). So As part of our ongoing studies of BOPIPY species (Qin et al., 2005; Yu et al., 2007) the structure of the title compound, (I), (Fig. 1) is now reported.
The BODIPY skeleton formed by the three conjugated heterocyclic rings is almost coplanar, with an r.m.s. deviation of 0.061 (3) Å; the maximum deviations from the mean plane are 0.113 (3) Å for B and 0.094 (3) Å for C4. Perhaps due to the presence of the C3 and C10 methyl groups, the benzene ring is almost perpendicular to the BODIPY mean plane, with the dihedral angle is 82.3 (1)°. The B—N distances in the central ring are almost identical, indicating delocaization of the formal positive charge on one of the N atoms (Table 1).