Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807031819/cv2270sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807031819/cv2270Isup2.hkl |
CCDC reference: 657663
Key indicators
- Single-crystal X-ray study
- T = 292 K
- Mean (C-C) = 0.005 Å
- R factor = 0.068
- wR factor = 0.190
- Data-to-parameter ratio = 13.3
checkCIF/PLATON results
No syntax errors found
Alert level B PLAT220_ALERT_2_B Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.71 Ratio
Alert level C DIFMX01_ALERT_2_C The maximum difference density is > 0.1*ZMAX*0.75 _refine_diff_density_max given = 0.762 Test value = 0.600 DIFMX02_ALERT_1_C The maximum difference density is > 0.1*ZMAX*0.75 The relevant atom site should be identified. PLAT041_ALERT_1_C Calc. and Rep. SumFormula Strings Differ .... ? PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ? PLAT045_ALERT_1_C Calculated and Reported Z Differ by ............ 2.00 Ratio PLAT097_ALERT_2_C Maximum (Positive) Residual Density ............ 0.76 e/A PLAT222_ALERT_3_C Large Non-Solvent H Ueq(max)/Ueq(min) ... 3.47 Ratio PLAT230_ALERT_2_C Hirshfeld Test Diff for N1 - C3 .. 5.69 su PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C2 PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds (x 1000) Ang ... 5
0 ALERT level A = In general: serious problem 1 ALERT level B = Potentially serious problem 10 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 4 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 5 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
The title compound was synthesized according to the procedure of Li et al. (2006) in 10% isolated yield. Crystals of (I) suitable for X-ray data collection were obtained by slow evaporation of a chloroform and methaol solution in ratio of 20:1 at 293 K.
All H atoms were positioned geometrically (C—H = 0.96–0.97 Å) and refined using a riding model, with Uiso(H) = 1.2Ueq(C) (1.5Ueq(C) for methly) of the parent atoms.
In 1905, Behrend reported that the condensation of glycoluril and formadehyde in dilute HCl yielded an insoluble polymeric material now known as Behrend's polymer (Behrend et al., 1905). After 76 years, the molecular structure (obtained by heating Behrend's polymer in H2SO4) was disclosed by Mock and co-workers who named it cucurbituril (Freeman et al., 1981). Glycoluril and its derivatives have during the past two decades established an impressive career as building block for supramolecular chemistry (Freeman et al., 1981; Rebek, 2005; Rowan et al., 1999; Wu et al., 2002). As a part of our ongoing investigation into glycoluril derivatives (Li et al., 2006), we report here the structure of the title compound (I) (Fig. 1).
The molecular structure of (I) is shown in Fig. 1. It has four fused rings - two imidazole and two triazinane rings, respectively. The crystal packing is stabilized by intermolecular non-classical C—H···O hydrogen bonds (Table 1).
For preparation of the title compound, see: Li et al. (2006). For general background regarding glycoluril and its derivatives, see: Behrend et al. (1905); Freeman et al. (1981); Rebek (2005); Rowan et al. (1999); Wu et al. (2002).
Data collection: SMART (Bruker, 2001); cell refinement: SAINT (Bruker, 2001); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: PLATON.
Fig. 1. View of the molecule of (I) showing the atom-labelling scheme. Displacement ellipsoids are drawn at the 30% probability level. H atoms are represented by spheres of arbitrary radius. |
C18H28N6O6 | F(000) = 1808 |
Mr = 424.47 | Dx = 1.352 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 3350 reflections |
a = 20.3689 (13) Å | θ = 2.5–22.8° |
b = 7.8804 (5) Å | µ = 0.10 mm−1 |
c = 25.9921 (16) Å | T = 292 K |
β = 91.697 (1)° | Block, colourless |
V = 4170.3 (5) Å3 | 0.30 × 0.20 × 0.20 mm |
Z = 8 |
Bruker SMART 4K CCD area-detector diffractometer | 2901 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.031 |
Graphite monochromator | θmax = 25.0°, θmin = 2.0° |
φ and ω scans | h = −24→20 |
13315 measured reflections | k = −9→9 |
3662 independent reflections | l = −30→30 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.068 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.190 | H-atom parameters constrained |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0969P)2 + 6.5727P] where P = (Fo2 + 2Fc2)/3 |
3662 reflections | (Δ/σ)max < 0.001 |
275 parameters | Δρmax = 0.76 e Å−3 |
0 restraints | Δρmin = −0.50 e Å−3 |
C18H28N6O6 | V = 4170.3 (5) Å3 |
Mr = 424.47 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 20.3689 (13) Å | µ = 0.10 mm−1 |
b = 7.8804 (5) Å | T = 292 K |
c = 25.9921 (16) Å | 0.30 × 0.20 × 0.20 mm |
β = 91.697 (1)° |
Bruker SMART 4K CCD area-detector diffractometer | 2901 reflections with I > 2σ(I) |
13315 measured reflections | Rint = 0.031 |
3662 independent reflections |
R[F2 > 2σ(F2)] = 0.068 | 0 restraints |
wR(F2) = 0.190 | H-atom parameters constrained |
S = 1.04 | Δρmax = 0.76 e Å−3 |
3662 reflections | Δρmin = −0.50 e Å−3 |
275 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.5192 (2) | 0.4727 (9) | 0.3310 (2) | 0.115 (2) | |
H1A | 0.5198 | 0.3943 | 0.3027 | 0.172* | |
H1B | 0.5529 | 0.4427 | 0.3559 | 0.172* | |
H1C | 0.5270 | 0.5855 | 0.3186 | 0.172* | |
C2 | 0.45446 (17) | 0.4660 (5) | 0.35513 (14) | 0.0613 (9) | |
H2A | 0.4509 | 0.3599 | 0.3738 | 0.074* | |
H2B | 0.4517 | 0.5578 | 0.3799 | 0.074* | |
C3 | 0.39338 (16) | 0.6401 (4) | 0.29128 (11) | 0.0521 (8) | |
H3A | 0.3668 | 0.6243 | 0.2601 | 0.062* | |
H3B | 0.4368 | 0.6758 | 0.2813 | 0.062* | |
C4 | 0.33661 (15) | 0.4321 (4) | 0.33911 (11) | 0.0459 (7) | |
H4A | 0.3429 | 0.3321 | 0.3605 | 0.055* | |
H4B | 0.3063 | 0.4023 | 0.3111 | 0.055* | |
C5 | 0.39979 (14) | 0.8907 (4) | 0.35146 (11) | 0.0429 (7) | |
C6 | 0.31809 (13) | 0.5820 (3) | 0.42271 (10) | 0.0374 (6) | |
C7 | 0.30321 (13) | 0.7315 (3) | 0.34576 (10) | 0.0344 (6) | |
C8 | 0.24532 (14) | 0.7504 (4) | 0.30633 (11) | 0.0417 (7) | |
C9 | 0.14594 (14) | 0.6412 (4) | 0.27281 (13) | 0.0526 (8) | |
H9A | 0.1584 | 0.6089 | 0.2384 | 0.063* | |
H9B | 0.1296 | 0.7569 | 0.2716 | 0.063* | |
C10 | 0.09497 (19) | 0.5268 (6) | 0.29102 (18) | 0.0849 (13) | |
H10A | 0.1120 | 0.4134 | 0.2932 | 0.127* | |
H10B | 0.0579 | 0.5292 | 0.2674 | 0.127* | |
H10C | 0.0816 | 0.5629 | 0.3244 | 0.127* | |
C11 | 0.30001 (13) | 0.8576 (3) | 0.39207 (10) | 0.0363 (6) | |
C12 | 0.23560 (15) | 0.9608 (4) | 0.39291 (12) | 0.0462 (7) | |
C13 | 0.1855 (2) | 1.2302 (6) | 0.3808 (2) | 0.0906 (14) | |
H13A | 0.1944 | 1.3313 | 0.3610 | 0.109* | |
H13B | 0.1498 | 1.1688 | 0.3637 | 0.109* | |
C14 | 0.1675 (3) | 1.2762 (8) | 0.4321 (3) | 0.128 (2) | |
H14A | 0.1501 | 1.1787 | 0.4491 | 0.191* | |
H14B | 0.1348 | 1.3639 | 0.4303 | 0.191* | |
H14C | 0.2055 | 1.3168 | 0.4510 | 0.191* | |
C15 | 0.38474 (15) | 1.0349 (4) | 0.43596 (12) | 0.0472 (7) | |
H15A | 0.4276 | 1.0836 | 0.4299 | 0.057* | |
H15B | 0.3559 | 1.1264 | 0.4459 | 0.057* | |
C16 | 0.32934 (15) | 0.8260 (4) | 0.48422 (11) | 0.0470 (7) | |
H16A | 0.2969 | 0.9055 | 0.4963 | 0.056* | |
H16B | 0.3354 | 0.7390 | 0.5103 | 0.056* | |
C17 | 0.44876 (16) | 0.8037 (4) | 0.47574 (13) | 0.0542 (8) | |
H17A | 0.4868 | 0.8714 | 0.4674 | 0.065* | |
H17B | 0.4417 | 0.7211 | 0.4485 | 0.065* | |
C18 | 0.4623 (2) | 0.7123 (5) | 0.52582 (16) | 0.0754 (11) | |
H18A | 0.4609 | 0.7917 | 0.5538 | 0.113* | |
H18B | 0.5050 | 0.6608 | 0.5253 | 0.113* | |
H18C | 0.4296 | 0.6261 | 0.5303 | 0.113* | |
N1 | 0.39898 (13) | 0.4795 (3) | 0.31793 (9) | 0.0498 (7) | |
N2 | 0.36403 (11) | 0.7760 (3) | 0.32213 (8) | 0.0406 (6) | |
N3 | 0.30724 (11) | 0.5667 (3) | 0.36995 (8) | 0.0359 (5) | |
N4 | 0.35879 (11) | 0.9595 (3) | 0.38760 (9) | 0.0393 (6) | |
N5 | 0.30415 (11) | 0.7466 (3) | 0.43647 (8) | 0.0372 (5) | |
N6 | 0.39087 (12) | 0.9148 (3) | 0.47816 (9) | 0.0469 (6) | |
O1 | 0.45657 (11) | 0.9299 (3) | 0.34542 (9) | 0.0636 (7) | |
O2 | 0.33390 (12) | 0.4685 (3) | 0.45184 (8) | 0.0536 (6) | |
O3 | 0.24162 (13) | 0.8728 (4) | 0.27949 (11) | 0.0837 (9) | |
O4 | 0.20263 (9) | 0.6294 (2) | 0.30835 (7) | 0.0441 (5) | |
O5 | 0.18423 (11) | 0.8918 (3) | 0.39870 (10) | 0.0624 (7) | |
O6 | 0.24504 (12) | 1.1218 (3) | 0.38462 (13) | 0.0812 (9) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.056 (3) | 0.201 (6) | 0.087 (3) | 0.026 (3) | −0.002 (2) | 0.011 (4) |
C2 | 0.056 (2) | 0.072 (2) | 0.055 (2) | 0.0107 (17) | −0.0103 (16) | −0.0021 (17) |
C3 | 0.0484 (18) | 0.071 (2) | 0.0370 (16) | 0.0034 (15) | 0.0055 (13) | −0.0026 (15) |
C4 | 0.0529 (18) | 0.0413 (15) | 0.0428 (16) | 0.0034 (13) | −0.0097 (14) | −0.0052 (13) |
C5 | 0.0364 (16) | 0.0516 (17) | 0.0405 (15) | −0.0100 (13) | −0.0011 (12) | 0.0145 (13) |
C6 | 0.0384 (15) | 0.0360 (14) | 0.0377 (15) | −0.0082 (12) | −0.0034 (12) | 0.0062 (12) |
C7 | 0.0345 (14) | 0.0342 (13) | 0.0344 (14) | −0.0035 (11) | −0.0032 (11) | 0.0034 (11) |
C8 | 0.0417 (16) | 0.0445 (16) | 0.0384 (15) | −0.0039 (13) | −0.0077 (12) | 0.0089 (13) |
C9 | 0.0371 (16) | 0.0630 (19) | 0.0566 (19) | 0.0025 (14) | −0.0149 (14) | −0.0001 (15) |
C10 | 0.048 (2) | 0.103 (3) | 0.102 (3) | −0.021 (2) | −0.016 (2) | 0.015 (3) |
C11 | 0.0331 (14) | 0.0333 (13) | 0.0424 (15) | −0.0056 (11) | −0.0004 (11) | 0.0038 (11) |
C12 | 0.0420 (17) | 0.0380 (15) | 0.0581 (19) | −0.0074 (13) | −0.0053 (14) | −0.0002 (13) |
C13 | 0.080 (3) | 0.068 (3) | 0.124 (4) | 0.010 (2) | −0.005 (3) | 0.018 (3) |
C14 | 0.127 (5) | 0.117 (4) | 0.140 (5) | 0.008 (4) | 0.030 (4) | −0.047 (4) |
C15 | 0.0483 (18) | 0.0383 (15) | 0.0544 (18) | −0.0111 (13) | −0.0062 (14) | −0.0022 (13) |
C16 | 0.0562 (19) | 0.0498 (17) | 0.0351 (15) | −0.0069 (14) | 0.0009 (13) | −0.0058 (13) |
C17 | 0.0535 (19) | 0.0525 (18) | 0.0559 (19) | −0.0064 (15) | −0.0116 (15) | −0.0058 (15) |
C18 | 0.070 (2) | 0.074 (2) | 0.081 (3) | −0.010 (2) | −0.026 (2) | 0.017 (2) |
N1 | 0.0513 (16) | 0.0541 (15) | 0.0435 (14) | 0.0085 (12) | −0.0034 (12) | −0.0020 (12) |
N2 | 0.0381 (13) | 0.0480 (13) | 0.0356 (12) | −0.0042 (10) | −0.0001 (10) | 0.0049 (10) |
N3 | 0.0406 (13) | 0.0338 (11) | 0.0327 (12) | −0.0043 (9) | −0.0064 (9) | 0.0023 (9) |
N4 | 0.0376 (13) | 0.0367 (12) | 0.0433 (13) | −0.0089 (10) | −0.0043 (10) | 0.0037 (10) |
N5 | 0.0426 (13) | 0.0362 (12) | 0.0330 (12) | −0.0069 (10) | 0.0022 (10) | 0.0020 (9) |
N6 | 0.0536 (15) | 0.0437 (13) | 0.0428 (14) | −0.0072 (12) | −0.0069 (11) | −0.0048 (11) |
O1 | 0.0419 (13) | 0.0848 (17) | 0.0644 (15) | −0.0225 (12) | 0.0067 (11) | 0.0081 (12) |
O2 | 0.0770 (16) | 0.0419 (11) | 0.0411 (11) | −0.0071 (10) | −0.0120 (10) | 0.0114 (9) |
O3 | 0.0736 (17) | 0.0874 (18) | 0.0875 (19) | −0.0298 (14) | −0.0399 (15) | 0.0500 (16) |
O4 | 0.0349 (11) | 0.0496 (11) | 0.0471 (12) | −0.0065 (9) | −0.0091 (9) | 0.0052 (9) |
O5 | 0.0426 (13) | 0.0577 (14) | 0.0871 (18) | −0.0013 (11) | 0.0073 (12) | 0.0011 (12) |
O6 | 0.0559 (15) | 0.0467 (14) | 0.140 (3) | 0.0042 (11) | −0.0048 (16) | 0.0078 (15) |
C1—C2 | 1.479 (6) | C10—H10A | 0.9600 |
C1—H1A | 0.9600 | C10—H10B | 0.9600 |
C1—H1B | 0.9600 | C10—H10C | 0.9600 |
C1—H1C | 0.9600 | C11—N5 | 1.448 (3) |
C2—N1 | 1.469 (4) | C11—N4 | 1.449 (3) |
C2—H2A | 0.9700 | C11—C12 | 1.544 (4) |
C2—H2B | 0.9700 | C12—O5 | 1.192 (3) |
C3—N1 | 1.446 (4) | C12—O6 | 1.302 (4) |
C3—N2 | 1.475 (4) | C13—C14 | 1.438 (7) |
C3—H3A | 0.9700 | C13—O6 | 1.485 (5) |
C3—H3B | 0.9700 | C13—H13A | 0.9700 |
C4—N1 | 1.448 (4) | C13—H13B | 0.9700 |
C4—N3 | 1.468 (4) | C14—H14A | 0.9600 |
C4—H4A | 0.9700 | C14—H14B | 0.9600 |
C4—H4B | 0.9700 | C14—H14C | 0.9600 |
C5—O1 | 1.212 (3) | C15—N6 | 1.452 (4) |
C5—N2 | 1.377 (4) | C15—N4 | 1.474 (4) |
C5—N4 | 1.386 (4) | C15—H15A | 0.9700 |
C6—O2 | 1.210 (3) | C15—H15B | 0.9700 |
C6—N5 | 1.377 (3) | C16—N6 | 1.448 (4) |
C6—N3 | 1.388 (3) | C16—N5 | 1.469 (3) |
C7—N2 | 1.442 (3) | C16—H16A | 0.9700 |
C7—N3 | 1.444 (3) | C16—H16B | 0.9700 |
C7—C8 | 1.547 (4) | C17—N6 | 1.471 (4) |
C7—C11 | 1.564 (4) | C17—C18 | 1.506 (5) |
C8—O3 | 1.192 (3) | C17—H17A | 0.9700 |
C8—O4 | 1.293 (3) | C17—H17B | 0.9700 |
C9—O4 | 1.460 (3) | C18—H18A | 0.9600 |
C9—C10 | 1.464 (5) | C18—H18B | 0.9600 |
C9—H9A | 0.9700 | C18—H18C | 0.9600 |
C9—H9B | 0.9700 | ||
C2—C1—H1A | 109.5 | O5—C12—C11 | 120.7 (3) |
C2—C1—H1B | 109.5 | O6—C12—C11 | 112.4 (3) |
H1A—C1—H1B | 109.5 | C14—C13—O6 | 108.3 (5) |
C2—C1—H1C | 109.5 | C14—C13—H13A | 110.0 |
H1A—C1—H1C | 109.5 | O6—C13—H13A | 110.0 |
H1B—C1—H1C | 109.5 | C14—C13—H13B | 110.0 |
N1—C2—C1 | 113.3 (3) | O6—C13—H13B | 110.0 |
N1—C2—H2A | 108.9 | H13A—C13—H13B | 108.4 |
C1—C2—H2A | 108.9 | C13—C14—H14A | 109.5 |
N1—C2—H2B | 108.9 | C13—C14—H14B | 109.5 |
C1—C2—H2B | 108.9 | H14A—C14—H14B | 109.5 |
H2A—C2—H2B | 107.7 | C13—C14—H14C | 109.5 |
N1—C3—N2 | 113.8 (2) | H14A—C14—H14C | 109.5 |
N1—C3—H3A | 108.8 | H14B—C14—H14C | 109.5 |
N2—C3—H3A | 108.8 | N6—C15—N4 | 113.7 (2) |
N1—C3—H3B | 108.8 | N6—C15—H15A | 108.8 |
N2—C3—H3B | 108.8 | N4—C15—H15A | 108.8 |
H3A—C3—H3B | 107.7 | N6—C15—H15B | 108.8 |
N1—C4—N3 | 113.4 (2) | N4—C15—H15B | 108.8 |
N1—C4—H4A | 108.9 | H15A—C15—H15B | 107.7 |
N3—C4—H4A | 108.9 | N6—C16—N5 | 113.3 (2) |
N1—C4—H4B | 108.9 | N6—C16—H16A | 108.9 |
N3—C4—H4B | 108.9 | N5—C16—H16A | 108.9 |
H4A—C4—H4B | 107.7 | N6—C16—H16B | 108.9 |
O1—C5—N2 | 125.9 (3) | N5—C16—H16B | 108.9 |
O1—C5—N4 | 125.8 (3) | H16A—C16—H16B | 107.7 |
N2—C5—N4 | 108.2 (2) | N6—C17—C18 | 111.9 (3) |
O2—C6—N5 | 125.9 (3) | N6—C17—H17A | 109.2 |
O2—C6—N3 | 125.9 (3) | C18—C17—H17A | 109.2 |
N5—C6—N3 | 108.1 (2) | N6—C17—H17B | 109.2 |
N2—C7—N3 | 111.5 (2) | C18—C17—H17B | 109.2 |
N2—C7—C8 | 110.0 (2) | H17A—C17—H17B | 107.9 |
N3—C7—C8 | 114.1 (2) | C17—C18—H18A | 109.5 |
N2—C7—C11 | 103.2 (2) | C17—C18—H18B | 109.5 |
N3—C7—C11 | 103.9 (2) | H18A—C18—H18B | 109.5 |
C8—C7—C11 | 113.6 (2) | C17—C18—H18C | 109.5 |
O3—C8—O4 | 126.2 (3) | H18A—C18—H18C | 109.5 |
O3—C8—C7 | 120.0 (3) | H18B—C18—H18C | 109.5 |
O4—C8—C7 | 113.7 (2) | C3—N1—C4 | 110.5 (2) |
O4—C9—C10 | 108.1 (3) | C3—N1—C2 | 115.3 (3) |
O4—C9—H9A | 110.1 | C4—N1—C2 | 113.4 (3) |
C10—C9—H9A | 110.1 | C5—N2—C7 | 111.8 (2) |
O4—C9—H9B | 110.1 | C5—N2—C3 | 124.1 (2) |
C10—C9—H9B | 110.1 | C7—N2—C3 | 114.9 (2) |
H9A—C9—H9B | 108.4 | C6—N3—C7 | 110.9 (2) |
C9—C10—H10A | 109.5 | C6—N3—C4 | 123.2 (2) |
C9—C10—H10B | 109.5 | C7—N3—C4 | 115.5 (2) |
H10A—C10—H10B | 109.5 | C5—N4—C11 | 110.7 (2) |
C9—C10—H10C | 109.5 | C5—N4—C15 | 121.9 (2) |
H10A—C10—H10C | 109.5 | C11—N4—C15 | 115.6 (2) |
H10B—C10—H10C | 109.5 | C6—N5—C11 | 111.7 (2) |
N5—C11—N4 | 111.7 (2) | C6—N5—C16 | 123.5 (2) |
N5—C11—C12 | 109.6 (2) | C11—N5—C16 | 115.2 (2) |
N4—C11—C12 | 114.4 (2) | C16—N6—C15 | 110.0 (2) |
N5—C11—C7 | 103.1 (2) | C16—N6—C17 | 114.5 (2) |
N4—C11—C7 | 103.7 (2) | C15—N6—C17 | 114.0 (3) |
C12—C11—C7 | 113.6 (2) | C8—O4—C9 | 116.6 (2) |
O5—C12—O6 | 126.8 (3) | C12—O6—C13 | 116.6 (3) |
N2—C7—C8—O3 | −44.8 (4) | C8—C7—N3—C6 | −134.4 (2) |
N3—C7—C8—O3 | −170.9 (3) | C11—C7—N3—C6 | −10.2 (3) |
C11—C7—C8—O3 | 70.3 (4) | N2—C7—N3—C4 | −46.0 (3) |
N2—C7—C8—O4 | 138.7 (2) | C8—C7—N3—C4 | 79.3 (3) |
N3—C7—C8—O4 | 12.6 (3) | C11—C7—N3—C4 | −156.5 (2) |
C11—C7—C8—O4 | −106.1 (3) | N1—C4—N3—C6 | −91.5 (3) |
N2—C7—C11—N5 | −115.2 (2) | N1—C4—N3—C7 | 50.3 (3) |
N3—C7—C11—N5 | 1.2 (2) | O1—C5—N4—C11 | −166.8 (3) |
C8—C7—C11—N5 | 125.7 (2) | N2—C5—N4—C11 | 15.9 (3) |
N2—C7—C11—N4 | 1.4 (2) | O1—C5—N4—C15 | −25.8 (4) |
N3—C7—C11—N4 | 117.8 (2) | N2—C5—N4—C15 | 156.9 (2) |
C8—C7—C11—N4 | −117.7 (2) | N5—C11—N4—C5 | 100.0 (3) |
N2—C7—C11—C12 | 126.2 (2) | C12—C11—N4—C5 | −134.7 (2) |
N3—C7—C11—C12 | −117.4 (2) | C7—C11—N4—C5 | −10.4 (3) |
C8—C7—C11—C12 | 7.1 (3) | N5—C11—N4—C15 | −43.7 (3) |
N5—C11—C12—O5 | −50.3 (4) | C12—C11—N4—C15 | 81.6 (3) |
N4—C11—C12—O5 | −176.7 (3) | C7—C11—N4—C15 | −154.1 (2) |
C7—C11—C12—O5 | 64.4 (4) | N6—C15—N4—C5 | −90.4 (3) |
N5—C11—C12—O6 | 132.3 (3) | N6—C15—N4—C11 | 49.0 (3) |
N4—C11—C12—O6 | 6.0 (4) | O2—C6—N5—C11 | 168.3 (3) |
C7—C11—C12—O6 | −112.9 (3) | N3—C6—N5—C11 | −15.0 (3) |
N2—C3—N1—C4 | 51.4 (3) | O2—C6—N5—C16 | 24.0 (4) |
N2—C3—N1—C2 | −78.8 (3) | N3—C6—N5—C16 | −159.4 (2) |
N3—C4—N1—C3 | −51.2 (3) | N4—C11—N5—C6 | −102.5 (3) |
N3—C4—N1—C2 | 79.9 (3) | C12—C11—N5—C6 | 129.5 (2) |
C1—C2—N1—C3 | −65.4 (5) | C7—C11—N5—C6 | 8.2 (3) |
C1—C2—N1—C4 | 165.8 (4) | N4—C11—N5—C16 | 44.9 (3) |
O1—C5—N2—C7 | 167.7 (3) | C12—C11—N5—C16 | −83.0 (3) |
N4—C5—N2—C7 | −15.1 (3) | C7—C11—N5—C16 | 155.7 (2) |
O1—C5—N2—C3 | 22.6 (4) | N6—C16—N5—C6 | 91.7 (3) |
N4—C5—N2—C3 | −160.1 (2) | N6—C16—N5—C11 | −51.5 (3) |
N3—C7—N2—C5 | −102.8 (3) | N5—C16—N6—C15 | 53.3 (3) |
C8—C7—N2—C5 | 129.7 (2) | N5—C16—N6—C17 | −76.6 (3) |
C11—C7—N2—C5 | 8.1 (3) | N4—C15—N6—C16 | −52.1 (3) |
N3—C7—N2—C3 | 45.7 (3) | N4—C15—N6—C17 | 78.1 (3) |
C8—C7—N2—C3 | −81.9 (3) | C18—C17—N6—C16 | −66.0 (3) |
C11—C7—N2—C3 | 156.6 (2) | C18—C17—N6—C15 | 166.1 (3) |
N1—C3—N2—C5 | 93.8 (3) | O3—C8—O4—C9 | 2.6 (5) |
N1—C3—N2—C7 | −50.3 (3) | C7—C8—O4—C9 | 178.8 (2) |
O2—C6—N3—C7 | −167.5 (3) | C10—C9—O4—C8 | −162.9 (3) |
N5—C6—N3—C7 | 15.8 (3) | O5—C12—O6—C13 | −1.5 (6) |
O2—C6—N3—C4 | −24.3 (4) | C11—C12—O6—C13 | 175.7 (3) |
N5—C6—N3—C4 | 159.1 (2) | C14—C13—O6—C12 | 83.9 (5) |
N2—C7—N3—C6 | 100.3 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4B···O3i | 0.97 | 2.53 | 3.460 (4) | 160 |
Symmetry code: (i) −x+1/2, y−1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C18H28N6O6 |
Mr | 424.47 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 292 |
a, b, c (Å) | 20.3689 (13), 7.8804 (5), 25.9921 (16) |
β (°) | 91.697 (1) |
V (Å3) | 4170.3 (5) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.10 |
Crystal size (mm) | 0.30 × 0.20 × 0.20 |
Data collection | |
Diffractometer | Bruker SMART 4K CCD area-detector |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 13315, 3662, 2901 |
Rint | 0.031 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.068, 0.190, 1.04 |
No. of reflections | 3662 |
No. of parameters | 275 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.76, −0.50 |
Computer programs: SMART (Bruker, 2001), SAINT (Bruker, 2001), SAINT, SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), PLATON (Spek, 2003), PLATON.
D—H···A | D—H | H···A | D···A | D—H···A |
C4—H4B···O3i | 0.97 | 2.53 | 3.460 (4) | 160 |
Symmetry code: (i) −x+1/2, y−1/2, −z+1/2. |
In 1905, Behrend reported that the condensation of glycoluril and formadehyde in dilute HCl yielded an insoluble polymeric material now known as Behrend's polymer (Behrend et al., 1905). After 76 years, the molecular structure (obtained by heating Behrend's polymer in H2SO4) was disclosed by Mock and co-workers who named it cucurbituril (Freeman et al., 1981). Glycoluril and its derivatives have during the past two decades established an impressive career as building block for supramolecular chemistry (Freeman et al., 1981; Rebek, 2005; Rowan et al., 1999; Wu et al., 2002). As a part of our ongoing investigation into glycoluril derivatives (Li et al., 2006), we report here the structure of the title compound (I) (Fig. 1).
The molecular structure of (I) is shown in Fig. 1. It has four fused rings - two imidazole and two triazinane rings, respectively. The crystal packing is stabilized by intermolecular non-classical C—H···O hydrogen bonds (Table 1).