Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807040469/bh2122sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807040469/bh2122Isup2.hkl |
CCDC reference: 662414
Key indicators
- Single-crystal X-ray study
- T = 294 K
- Mean (C-C) = 0.005 Å
- R factor = 0.050
- wR factor = 0.134
- Data-to-parameter ratio = 15.9
checkCIF/PLATON results
No syntax errors found
Alert level B PLAT230_ALERT_2_B Hirshfeld Test Diff for N1 - C4 .. 13.26 su
Alert level C PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for S1 PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for C3 PLAT322_ALERT_2_C Check Hybridisation of S1 in Main Residue . ? PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds (x 1000) Ang ... 5
Alert level G PLAT793_ALERT_1_G Check the Absolute Configuration of C2 = ... R
0 ALERT level A = In general: serious problem 1 ALERT level B = Potentially serious problem 4 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 4 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
A suspension of 1,4-dibromomethylbenzene (5 mmol) in THF (10 ml) was added dropwise to a mixture of 2-mercapto-5-methyl-4,5-dihydrothiazole (11 mmol), KOH (11 mmol) and ethanol (20 ml). The reaction mixture was then stirred for 24 h at room temperature. The precipitate was filtered off, washed with water and recrystallized from ethanol (yield 65%, m.p. 378–379 K). Crystals of (I) suitable for single-crystal X-ray analysis were grown by slow evaporation of a solution in a mixture of chloroform/ethanol (1:1).
All H atoms were positioned geometrically and refined using a riding model approximation, with C—H bonds fixed to 0.93 (aromatic CH), 0.96 (methyl CH3, considered as a rigid group allowed to rotate) 0.97 (methylene CH2) or 0.98 Å (methine CH). Isotropic displacement parameters for H atoms were fixed as Uiso = 1.5Ueq(carrier C) for the methyl group and Uiso = 1.5Ueq(carrier C) otherwise.
As a type of ditopic ligand, dithioethers can be used as bridging ligands in the construction of coordination polymers with soft metal ions. A series of flexible or rigid chain-linked dithioethers containing N-heterocylcic moieties have been synthesized and investigated (Sharma et al., 1999; Constable et al., 2002). Early studies reported that several tetrazole and imidazole derivatives possess a variety of coordination properties (van den Heuvel et al., 1983; Yang et al., 2000). In order to study the properties of dihydrothiazole derivatives, we have synthesized the title compound, (I), and present here its molecular structure.
The title compound contains two 5-methyl-4,5-dihydrothiazole rings and a central benzene ring. The whole molecule lies on a crystallographic inversion centre [symmetry code: (i) -x,-y + 1,-z + 1] and the terminal (5-methyl-4,5-dihydrothiazole-2-yl)sulfanyl groups thus adopt a trans configuration with respect to the central benzene ring. In the thiazole ring, the C4 atom of the C═N bond has a distorted trigonal geometry, with the N1—C4—S2 [127.8 (3)°] and N1—C4—S1 [116.0 (3)°] angles deviating significantly from the ideal values expected for an sp2 hybridized C atom.
Due to the p–π configuration between the S2 atom and the adjacent C═N bond, the S2—C4 bond, 1.759 (3) Å, is significantly shorter than the S2—C5 bond, 1.822 (4) Å. These values compare well with the values of 1.726 (2), 1.720 (8) and 1.800 (3), 1.811 (2) Å reported in the literature (Wang et al., 2004, 2005). The effect is also observed for S1 in the substituted dihydrothiazole ring.
A closely dithiazole structure, 2,2'-[1,4-phenylenebis(methylenethio)]dithiazole, has been published by Zhang et al. (2003).
For related literature, see: Constable et al. (2002); van den Heuvel et al. (1983); Sharma et al. (1999); Wang et al. (2004, 2005); Yang et al. (2000); Zhang et al. (2003).
Data collection: SMART (Bruker, 1997); cell refinement: SAINT (Bruker, 1997); data reduction: SAINT (Bruker, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 1997); software used to prepare material for publication: SHELXTL (Bruker, 1997).
Fig. 1. View of the molecule of (I) showing the atom-labeling scheme. Displacement ellipsoids are drawn at the 35% probability level. Symmetry code: (A) -x, -y + 1, -z + 1. |
C16H20N2S4 | F(000) = 388 |
Mr = 368.62 | Dx = 1.345 Mg m−3 |
Monoclinic, P21/c | Melting point = 378–379 K |
Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.71073 Å |
a = 6.9337 (8) Å | Cell parameters from 1193 reflections |
b = 16.133 (2) Å | θ = 2.5–24.1° |
c = 8.2475 (10) Å | µ = 0.52 mm−1 |
β = 99.519 (6)° | T = 294 K |
V = 909.89 (19) Å3 | Plate, colourless |
Z = 2 | 0.24 × 0.20 × 0.18 mm |
Bruker SMART 1000 diffractometer | 1605 independent reflections |
Radiation source: fine-focus sealed tube | 1155 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.039 |
φ and ω scans | θmax = 25.0°, θmin = 2.5° |
Absorption correction: multi-scan (SADABS; Bruker, 1997) | h = −8→8 |
Tmin = 0.886, Tmax = 0.912 | k = −19→11 |
3806 measured reflections | l = −9→7 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.050 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.135 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0596P)2 + 0.5874P] where P = (Fo2 + 2Fc2)/3 |
1605 reflections | (Δ/σ)max = 0.001 |
101 parameters | Δρmax = 0.32 e Å−3 |
0 restraints | Δρmin = −0.34 e Å−3 |
C16H20N2S4 | V = 909.89 (19) Å3 |
Mr = 368.62 | Z = 2 |
Monoclinic, P21/c | Mo Kα radiation |
a = 6.9337 (8) Å | µ = 0.52 mm−1 |
b = 16.133 (2) Å | T = 294 K |
c = 8.2475 (10) Å | 0.24 × 0.20 × 0.18 mm |
β = 99.519 (6)° |
Bruker SMART 1000 diffractometer | 1605 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 1997) | 1155 reflections with I > 2σ(I) |
Tmin = 0.886, Tmax = 0.912 | Rint = 0.039 |
3806 measured reflections |
R[F2 > 2σ(F2)] = 0.050 | 0 restraints |
wR(F2) = 0.135 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.32 e Å−3 |
1605 reflections | Δρmin = −0.34 e Å−3 |
101 parameters |
x | y | z | Uiso*/Ueq | ||
S1 | 0.45045 (15) | 0.88289 (6) | 0.58489 (15) | 0.0666 (4) | |
S2 | 0.25410 (12) | 0.71998 (6) | 0.49929 (12) | 0.0529 (3) | |
N1 | 0.6275 (4) | 0.74297 (17) | 0.6648 (3) | 0.0439 (7) | |
C1 | 0.8272 (6) | 0.9020 (3) | 0.5154 (6) | 0.0711 (12) | |
H1A | 0.9653 | 0.9008 | 0.5552 | 0.107* | |
H1B | 0.7913 | 0.9553 | 0.4683 | 0.107* | |
H1C | 0.7945 | 0.8599 | 0.4331 | 0.107* | |
C2 | 0.7177 (5) | 0.8862 (2) | 0.6559 (5) | 0.0548 (10) | |
H2 | 0.7487 | 0.9298 | 0.7387 | 0.066* | |
C3 | 0.7621 (6) | 0.8028 (3) | 0.7355 (5) | 0.0694 (12) | |
H3A | 0.8931 | 0.7859 | 0.7229 | 0.083* | |
H3B | 0.7577 | 0.8070 | 0.8521 | 0.083* | |
C4 | 0.4649 (5) | 0.7737 (2) | 0.5910 (4) | 0.0457 (9) | |
C5 | 0.3269 (5) | 0.6153 (2) | 0.5662 (5) | 0.0552 (10) | |
H5A | 0.4316 | 0.5966 | 0.5104 | 0.066* | |
H5B | 0.3752 | 0.6153 | 0.6835 | 0.066* | |
C6 | 0.1541 (5) | 0.4940 (2) | 0.4149 (4) | 0.0447 (8) | |
H6 | 0.2573 | 0.4895 | 0.3563 | 0.054* | |
C7 | 0.1553 (5) | 0.5568 (2) | 0.5287 (4) | 0.0409 (8) | |
C8 | −0.0019 (5) | 0.5621 (2) | 0.6133 (4) | 0.0471 (9) | |
H8 | −0.0046 | 0.6042 | 0.6900 | 0.056* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0570 (6) | 0.0447 (6) | 0.0984 (9) | 0.0025 (5) | 0.0135 (6) | −0.0024 (5) |
S2 | 0.0413 (5) | 0.0431 (5) | 0.0681 (7) | −0.0072 (4) | −0.0094 (4) | 0.0057 (5) |
N1 | 0.0331 (14) | 0.0483 (17) | 0.0468 (17) | 0.0028 (12) | −0.0042 (13) | 0.0158 (13) |
C1 | 0.068 (3) | 0.066 (3) | 0.084 (3) | −0.019 (2) | 0.027 (2) | −0.002 (2) |
C2 | 0.056 (2) | 0.058 (2) | 0.051 (2) | −0.0226 (18) | 0.0062 (18) | −0.0135 (19) |
C3 | 0.058 (2) | 0.077 (3) | 0.067 (3) | −0.017 (2) | −0.011 (2) | 0.013 (2) |
C4 | 0.049 (2) | 0.046 (2) | 0.043 (2) | −0.0140 (16) | 0.0127 (17) | −0.0051 (16) |
C5 | 0.0438 (19) | 0.043 (2) | 0.074 (3) | −0.0050 (17) | −0.0040 (19) | 0.0080 (19) |
C6 | 0.0428 (18) | 0.044 (2) | 0.049 (2) | 0.0019 (15) | 0.0137 (16) | 0.0023 (17) |
C7 | 0.0390 (17) | 0.0343 (18) | 0.048 (2) | −0.0033 (14) | 0.0018 (16) | 0.0075 (15) |
C8 | 0.053 (2) | 0.0388 (19) | 0.048 (2) | −0.0020 (16) | 0.0062 (17) | −0.0091 (16) |
S1—C4 | 1.764 (4) | C3—H3A | 0.9700 |
S1—C2 | 1.850 (4) | C3—H3B | 0.9700 |
S2—C4 | 1.759 (3) | C5—C7 | 1.509 (5) |
S2—C5 | 1.822 (4) | C5—H5A | 0.9700 |
N1—C4 | 1.289 (4) | C5—H5B | 0.9700 |
N1—C3 | 1.401 (5) | C6—C7 | 1.380 (5) |
C1—C2 | 1.509 (5) | C6—C8i | 1.382 (5) |
C1—H1A | 0.9600 | C6—H6 | 0.9300 |
C1—H1B | 0.9600 | C7—C8 | 1.390 (5) |
C1—H1C | 0.9600 | C8—C6i | 1.382 (5) |
C2—C3 | 1.505 (5) | C8—H8 | 0.9300 |
C2—H2 | 0.9800 | ||
C4—S1—C2 | 88.30 (17) | H3A—C3—H3B | 108.0 |
C4—S2—C5 | 99.09 (17) | N1—C4—S2 | 127.8 (3) |
C4—N1—C3 | 113.7 (3) | N1—C4—S1 | 116.0 (3) |
C2—C1—H1A | 109.5 | S2—C4—S1 | 116.2 (2) |
C2—C1—H1B | 109.5 | C7—C5—S2 | 110.3 (2) |
H1A—C1—H1B | 109.5 | C7—C5—H5A | 109.6 |
C2—C1—H1C | 109.5 | S2—C5—H5A | 109.6 |
H1A—C1—H1C | 109.5 | C7—C5—H5B | 109.6 |
H1B—C1—H1C | 109.5 | S2—C5—H5B | 109.6 |
C3—C2—C1 | 113.2 (4) | H5A—C5—H5B | 108.1 |
C3—C2—S1 | 103.6 (2) | C7—C6—C8i | 120.9 (3) |
C1—C2—S1 | 111.5 (3) | C7—C6—H6 | 119.5 |
C3—C2—H2 | 109.5 | C8i—C6—H6 | 119.5 |
C1—C2—H2 | 109.5 | C6—C7—C8 | 118.0 (3) |
S1—C2—H2 | 109.5 | C6—C7—C5 | 120.9 (3) |
N1—C3—C2 | 111.1 (3) | C8—C7—C5 | 121.0 (3) |
N1—C3—H3A | 109.4 | C6i—C8—C7 | 121.1 (3) |
C2—C3—H3A | 109.4 | C6i—C8—H8 | 119.5 |
N1—C3—H3B | 109.4 | C7—C8—H8 | 119.5 |
C2—C3—H3B | 109.4 | ||
C4—S1—C2—C3 | −21.6 (3) | C2—S1—C4—N1 | 12.2 (3) |
C4—S1—C2—C1 | 100.4 (3) | C2—S1—C4—S2 | −169.1 (2) |
C4—N1—C3—C2 | −21.6 (5) | C4—S2—C5—C7 | 170.0 (3) |
C1—C2—C3—N1 | −92.7 (4) | C8i—C6—C7—C8 | −0.4 (5) |
S1—C2—C3—N1 | 28.2 (4) | C8i—C6—C7—C5 | 176.5 (3) |
C3—N1—C4—S2 | −175.4 (3) | S2—C5—C7—C6 | 113.9 (3) |
C3—N1—C4—S1 | 3.2 (4) | S2—C5—C7—C8 | −69.3 (4) |
C5—S2—C4—N1 | 7.4 (4) | C6—C7—C8—C6i | 0.4 (5) |
C5—S2—C4—S1 | −171.2 (2) | C5—C7—C8—C6i | −176.5 (3) |
Symmetry code: (i) −x, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C16H20N2S4 |
Mr | 368.62 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 294 |
a, b, c (Å) | 6.9337 (8), 16.133 (2), 8.2475 (10) |
β (°) | 99.519 (6) |
V (Å3) | 909.89 (19) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.52 |
Crystal size (mm) | 0.24 × 0.20 × 0.18 |
Data collection | |
Diffractometer | Bruker SMART 1000 |
Absorption correction | Multi-scan (SADABS; Bruker, 1997) |
Tmin, Tmax | 0.886, 0.912 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3806, 1605, 1155 |
Rint | 0.039 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.050, 0.135, 1.05 |
No. of reflections | 1605 |
No. of parameters | 101 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.32, −0.34 |
Computer programs: SMART (Bruker, 1997), SAINT (Bruker, 1997), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL (Bruker, 1997).
S1—C4 | 1.764 (4) | S2—C4 | 1.759 (3) |
S1—C2 | 1.850 (4) | S2—C5 | 1.822 (4) |
N1—C4—S2 | 127.8 (3) | N1—C4—S1 | 116.0 (3) |
As a type of ditopic ligand, dithioethers can be used as bridging ligands in the construction of coordination polymers with soft metal ions. A series of flexible or rigid chain-linked dithioethers containing N-heterocylcic moieties have been synthesized and investigated (Sharma et al., 1999; Constable et al., 2002). Early studies reported that several tetrazole and imidazole derivatives possess a variety of coordination properties (van den Heuvel et al., 1983; Yang et al., 2000). In order to study the properties of dihydrothiazole derivatives, we have synthesized the title compound, (I), and present here its molecular structure.
The title compound contains two 5-methyl-4,5-dihydrothiazole rings and a central benzene ring. The whole molecule lies on a crystallographic inversion centre [symmetry code: (i) -x,-y + 1,-z + 1] and the terminal (5-methyl-4,5-dihydrothiazole-2-yl)sulfanyl groups thus adopt a trans configuration with respect to the central benzene ring. In the thiazole ring, the C4 atom of the C═N bond has a distorted trigonal geometry, with the N1—C4—S2 [127.8 (3)°] and N1—C4—S1 [116.0 (3)°] angles deviating significantly from the ideal values expected for an sp2 hybridized C atom.
Due to the p–π configuration between the S2 atom and the adjacent C═N bond, the S2—C4 bond, 1.759 (3) Å, is significantly shorter than the S2—C5 bond, 1.822 (4) Å. These values compare well with the values of 1.726 (2), 1.720 (8) and 1.800 (3), 1.811 (2) Å reported in the literature (Wang et al., 2004, 2005). The effect is also observed for S1 in the substituted dihydrothiazole ring.
A closely dithiazole structure, 2,2'-[1,4-phenylenebis(methylenethio)]dithiazole, has been published by Zhang et al. (2003).