supplementary materials


Acta Cryst. (2007). E63, o3841    [ doi:10.1107/S1600536807032874 ]

7,8-Dichloro-1,2,3,4-tetrahydrophenazine

C. H. Zambrano, R. D. Pike, R. J. P. Gibson, B. D. Barger and E. E. Dueno

Abstract top

In the structure of the title compound, C12H10Cl2N2, the cyclohexene ring adopts a half-chair conformation.

Comment top

One of the primary interests of our lab is the synthesis and characterization of novel substituted quinoxalines and the closely related phenazines. Quinoxalines and their derivatives have received considerable attention in the past several years due to their electronic properties (Page et al., 1998; Simpson & Gordon, 1995), H-bonding ability (Pascal & Ho, 1993; Wozniak et al., 1993), and their capacity to coordinate to metals (Wu et al., 2002; Willett et al., 2001). During our investigations, we have prepared a number of substituted quinoxalines and phenazines, which readily coordinate to copper iodide forming novel structures. Our current work involves the synthesis of new nitrogen heterocycles (Gibson, et al., 2006) which may lead to novel three-dimensional structures upon coordination to cuprous salts. Here, we report the crystal structure of 7,8-dichloro-1,2,3,4-tetrahydrophenazine (I), (Figure 1).

The structure of (I) exhibits bond distances and angles that are normal, for all fall within ranges established in the literature for similar nitrogen heterocycles (Brown et al., 2004). There are two molecules per unit cell, related to each other by an inversion center. The chloride substituents are almost eclipsed with respect to each other, with a torsion angle Cl1—C10—C9—Cl2 of 0.36 (16)°. Both aromatic rings are essentially planar and almost co-planar with a dihedral angle of 1.20 (18)°, based on least-squares plane calculations on C12—C11—C10—C9—C8—C7 and C7—C12—N1—C1—C6—N2. The H-saturated fragment of the ring system adopts a twisted, cyclohexyl-like conformation as evidenced by the angles depicted by atoms C5 C4 C3 110.68 (12)°, C2 C3 C4 109.92 (12)°, and the C2—C3—C4—C5 torsion angle of 63.62 (17)°, which suggest the presence of some angle and torsional strain.

Related literature top

For related literature, see: Brown et al. (2004); Farrugia (1997); Gibson et al. (2006); Page et al. (1998); Pascal & Ho (1993); Simpson & Gordon (1995); Willett et al. (2001); Wozniak et al. (1993); Wu et al. (2002).

Experimental top

A 20 ml test tube was charged with 4,5-Dichloro-o-phenylenediamine (177 mg, 1 mmol) and 1,2-Cyclohexanedione (112 mg, 1 mmol). This was heated in a boiling water bath for 1 h, until the reaction mixture was homogeneous. The residue was then dissolved in boiling ethanol (100% EtOH, 15 ml). Upon cooling to 0° C, light yellow crystals of (1) were obtained (215 mg, 85% yield) mp 215–216° C.

Refinement top

H atoms were treated as riding, with C—H = 1.00 with Uiso(H) = 1.2 Ueq(C) for all H atoms.

Computing details top

Data collection: APEX2 (Bruker, 2004); cell refinement: SAINT-Plus (Bruker, 2004); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: XSHELL (Bruker, 2004); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 1997).

Figures top
[Figure 1] Fig. 1. ORTEP drawing of (I) (Farrugia, 1997). Displacement ellipsoids are drawn at the 50% probability level. H atoms are shown as spheres.
7,8-dichloro-1,2,3,4-tetrahydrophenazine top
Crystal data top
C12H10Cl2N2Z = 2
Mr = 253.12F000 = 260
Triclinic, P1Dx = 1.549 Mg m3
Hall symbol: -P 1Cu Kα radiation
λ = 1.54178 Å
a = 6.3442 (3) ÅCell parameters from 71 reflections
b = 7.3885 (3) Åθ = 9.5–41.0º
c = 11.7831 (5) ŵ = 5.13 mm1
α = 85.720 (2)ºT = 200 (2) K
β = 82.122 (2)ºBlock, yellow
γ = 83.572 (2)º0.35 × 0.21 × 0.08 mm
V = 542.68 (4) Å3
Data collection top
Bruker SMART APEX II CCD
diffractometer
1868 independent reflections
Radiation source: fine-focus sealed tube1810 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.034
T = 200(2) Kθmax = 67.0º
ω and ψ scansθmin = 3.8º
Absorption correction: multi-scan
(SADABS; Sheldrick, 2004)
h = 7→7
Tmin = 0.267, Tmax = 0.685k = 8→8
9473 measured reflectionsl = 14→14
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.032All H-atom parameters refined
wR(F2) = 0.089  w = 1/[σ2(Fo2) + (0.067P)2 + 0.0594P]
where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.001
1868 reflectionsΔρmax = 0.23 e Å3
185 parametersΔρmin = 0.29 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Crystal data top
C12H10Cl2N2γ = 83.572 (2)º
Mr = 253.12V = 542.68 (4) Å3
Triclinic, P1Z = 2
a = 6.3442 (3) ÅCu Kα
b = 7.3885 (3) ŵ = 5.13 mm1
c = 11.7831 (5) ÅT = 200 (2) K
α = 85.720 (2)º0.35 × 0.21 × 0.08 mm
β = 82.122 (2)º
Data collection top
Bruker SMART APEX II CCD
diffractometer
1868 independent reflections
Absorption correction: multi-scan
(SADABS; Sheldrick, 2004)
1810 reflections with I > 2σ(I)
Tmin = 0.267, Tmax = 0.685Rint = 0.034
9473 measured reflections
Refinement top
R[F2 > 2σ(F2)] = 0.032185 parameters
wR(F2) = 0.089All H-atom parameters refined
S = 1.05Δρmax = 0.23 e Å3
1868 reflectionsΔρmin = 0.29 e Å3
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R– factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Cl10.93385 (5)0.65523 (4)0.28885 (3)0.04023 (16)
Cl20.50704 (6)0.83977 (5)0.20124 (3)0.04102 (16)
N10.54783 (19)0.67203 (16)0.69452 (11)0.0335 (3)
N20.16607 (18)0.84040 (15)0.61792 (10)0.0314 (3)
C10.3736 (2)0.71175 (17)0.76619 (11)0.0313 (3)
C20.3837 (3)0.6595 (2)0.89145 (13)0.0402 (3)
C30.2006 (2)0.7516 (2)0.97160 (12)0.0395 (3)
C40.0116 (2)0.7388 (2)0.92727 (12)0.0390 (3)
C50.0180 (2)0.8423 (2)0.81112 (13)0.0382 (3)
C60.1794 (2)0.79711 (17)0.72703 (11)0.0307 (3)
C70.3461 (2)0.79900 (16)0.54201 (11)0.0294 (3)
C80.3393 (2)0.83969 (17)0.42346 (12)0.0322 (3)
C90.5173 (2)0.79438 (17)0.34757 (11)0.0322 (3)
C100.7083 (2)0.71125 (16)0.38628 (11)0.0316 (3)
C110.7188 (2)0.67350 (18)0.50048 (12)0.0340 (3)
C120.5361 (2)0.71473 (17)0.58085 (11)0.0298 (3)
H80.202 (3)0.896 (2)0.3985 (14)0.039 (4)*
H110.855 (3)0.616 (2)0.5315 (13)0.037 (4)*
H2A0.376 (3)0.524 (3)0.9028 (15)0.047 (4)*
H3A0.205 (3)0.698 (2)1.0494 (15)0.037 (4)*
H4A0.025 (3)0.613 (2)0.9204 (13)0.036 (4)*
H5A0.142 (3)0.818 (3)0.7777 (16)0.050 (5)*
H2B0.523 (3)0.682 (3)0.9123 (17)0.057 (5)*
H3B0.218 (3)0.880 (2)0.9745 (14)0.043 (4)*
H4B0.127 (3)0.781 (2)0.9851 (15)0.043 (4)*
H5B0.032 (3)0.976 (2)0.8240 (15)0.046 (4)*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Cl10.0375 (2)0.0407 (2)0.0404 (2)0.00292 (16)0.00363 (15)0.00642 (15)
Cl20.0478 (2)0.0431 (2)0.0313 (2)0.00231 (17)0.00522 (15)0.00027 (15)
N10.0326 (6)0.0321 (6)0.0357 (6)0.0007 (5)0.0071 (5)0.0007 (5)
N20.0302 (6)0.0283 (6)0.0354 (6)0.0037 (5)0.0041 (5)0.0023 (4)
C10.0332 (7)0.0272 (6)0.0337 (7)0.0040 (5)0.0056 (5)0.0001 (5)
C20.0387 (8)0.0460 (8)0.0348 (7)0.0002 (7)0.0069 (6)0.0016 (6)
C30.0451 (8)0.0406 (8)0.0329 (7)0.0077 (6)0.0032 (6)0.0014 (6)
C40.0387 (7)0.0392 (8)0.0373 (7)0.0057 (6)0.0011 (6)0.0008 (6)
C50.0336 (7)0.0381 (8)0.0402 (8)0.0006 (6)0.0004 (6)0.0025 (6)
C60.0325 (6)0.0242 (6)0.0354 (7)0.0051 (5)0.0048 (5)0.0013 (5)
C70.0297 (6)0.0231 (6)0.0358 (7)0.0046 (5)0.0051 (5)0.0001 (5)
C80.0337 (7)0.0274 (6)0.0363 (7)0.0043 (6)0.0077 (5)0.0009 (5)
C90.0398 (7)0.0261 (6)0.0318 (6)0.0078 (5)0.0059 (5)0.0003 (5)
C100.0328 (6)0.0246 (6)0.0372 (7)0.0044 (5)0.0013 (5)0.0041 (5)
C110.0318 (7)0.0301 (6)0.0399 (7)0.0012 (6)0.0059 (6)0.0024 (5)
C120.0320 (6)0.0249 (6)0.0331 (6)0.0039 (5)0.0066 (5)0.0002 (5)
Geometric parameters (Å, °) top
Cl1—C101.7394 (13)C4—C51.520 (2)
Cl2—C91.7405 (13)C4—H4A0.955 (17)
N1—C11.3151 (19)C4—H4B0.970 (18)
N1—C121.3632 (19)C5—C61.5090 (19)
N2—C61.3132 (18)C5—H5A0.97 (2)
N2—C71.3716 (18)C5—H5B1.001 (18)
C1—C61.4378 (19)C7—C121.4104 (19)
C1—C21.506 (2)C7—C81.412 (2)
C2—C31.524 (2)C8—C91.368 (2)
C2—H2A1.006 (19)C8—H80.995 (18)
C2—H2B0.99 (2)C9—C101.413 (2)
C3—C41.524 (2)C10—C111.363 (2)
C3—H3A0.974 (18)C11—C121.4133 (19)
C3—H3B0.969 (18)C11—H111.019 (17)
C1—N1—C12116.95 (11)C4—C5—H5A110.3 (11)
C6—N2—C7116.96 (12)C6—C5—H5B108.7 (10)
N1—C1—C6121.78 (13)C4—C5—H5B107.7 (10)
N1—C1—C2117.16 (12)H5A—C5—H5B108.0 (16)
C6—C1—C2121.04 (13)N2—C6—C1121.97 (13)
C1—C2—C3113.99 (13)N2—C6—C5117.29 (12)
C1—C2—H2A107.4 (10)C1—C6—C5120.73 (13)
C3—C2—H2A107.6 (10)N2—C7—C12120.84 (12)
C1—C2—H2B110.1 (12)N2—C7—C8119.23 (12)
C3—C2—H2B111.0 (12)C12—C7—C8119.92 (12)
H2A—C2—H2B106.4 (16)C9—C8—C7119.21 (12)
C4—C3—C2109.92 (12)C9—C8—H8122.7 (9)
C4—C3—H3A112.9 (10)C7—C8—H8118.0 (9)
C2—C3—H3A109.4 (10)C8—C9—C10120.99 (12)
C4—C3—H3B107.7 (10)C8—C9—Cl2119.22 (10)
C2—C3—H3B110.3 (10)C10—C9—Cl2119.79 (10)
H3A—C3—H3B106.5 (14)C11—C10—C9120.61 (12)
C5—C4—C3110.68 (12)C11—C10—Cl1118.89 (11)
C5—C4—H4A109.9 (9)C9—C10—Cl1120.50 (10)
C3—C4—H4A107.9 (10)C10—C11—C12119.75 (13)
C5—C4—H4B113.5 (11)C10—C11—H11122.7 (9)
C3—C4—H4B108.5 (10)C12—C11—H11117.6 (9)
H4A—C4—H4B106.2 (14)N1—C12—C7121.50 (12)
C6—C5—C4113.28 (12)N1—C12—C11119.01 (12)
C6—C5—H5A108.7 (11)C7—C12—C11119.49 (12)
C12—N1—C1—C60.29 (19)C12—C7—C8—C90.80 (19)
C12—N1—C1—C2178.13 (12)C7—C8—C9—C101.3 (2)
N1—C1—C2—C3164.89 (13)C7—C8—C9—Cl2178.55 (9)
C6—C1—C2—C316.7 (2)C8—C9—C10—C110.3 (2)
C1—C2—C3—C446.64 (17)Cl2—C9—C10—C11179.53 (10)
C2—C3—C4—C563.51 (17)C8—C9—C10—Cl1179.73 (9)
C3—C4—C5—C648.59 (17)Cl2—C9—C10—Cl10.43 (15)
C7—N2—C6—C10.57 (19)C9—C10—C11—C121.2 (2)
C7—N2—C6—C5179.97 (11)Cl1—C10—C11—C12178.78 (9)
N1—C1—C6—N20.3 (2)C1—N1—C12—C70.49 (19)
C2—C1—C6—N2178.61 (11)C1—N1—C12—C11179.57 (12)
N1—C1—C6—C5179.63 (11)N2—C7—C12—N10.18 (19)
C2—C1—C6—C52.0 (2)C8—C7—C12—N1179.40 (11)
C4—C5—C6—N2162.46 (13)N2—C7—C12—C11179.88 (11)
C4—C5—C6—C118.14 (19)C8—C7—C12—C110.66 (19)
C6—N2—C7—C120.36 (18)C10—C11—C12—N1178.41 (12)
C6—N2—C7—C8178.87 (11)C10—C11—C12—C71.6 (2)
N2—C7—C8—C9178.43 (11)
Acknowledgements top

EED acknowledges the National Science Foundation for primary support of this research (EPSCOR grant No. 450901). RDP is indebted to the NSF (CHE-0443345) and the College of William and Mary for the purchase of the X-ray equipment.

references
References top

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