Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807040251/sj2331sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807040251/sj2331Isup2.hkl |
CCDC reference: 660307
Key indicators
- Single-crystal X-ray study
- T = 150 K
- Mean (C-C) = 0.005 Å
- R factor = 0.064
- wR factor = 0.172
- Data-to-parameter ratio = 9.8
checkCIF/PLATON results
No syntax errors found
Alert level B RINTA01_ALERT_3_B The value of Rint is greater than 0.15 Rint given 0.167 PLAT020_ALERT_3_B The value of Rint is greater than 0.10 ......... 0.17
Alert level C PLAT088_ALERT_3_C Poor Data / Parameter Ratio .................... 9.78 PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds (x 1000) Ang ... 5
Alert level G ABSTM02_ALERT_3_G When printed, the submitted absorption T values will be replaced by the scaled T values. Since the ratio of scaled T's is identical to the ratio of reported T values, the scaling does not imply a change to the absorption corrections used in the study. Ratio of Tmax expected/reported 0.998 Tmax scaled 0.998 Tmin scaled 0.923
0 ALERT level A = In general: serious problem 2 ALERT level B = Potentially serious problem 2 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 5 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
The n-propylurea (C3—U) crystals were grown by evaporation, using 30% weight % H2O2 as the solvent. This was a failed attempt at preparing an n-propylurea H2O2 adduct.
The extremely thin, easily-distorted n-propylurea crystals produced a streaked diffraction pattern, which resulted in an elevated Rint. H atoms were refined isotropically.
For the purpose of this paper, n-propylurea will be referred to as C3—U in compliance with the system used by Hashimoto et al.. (2005) and is derived from the number of carbon atoms in the alkyl group, H2NCONHCnH2n+1.
In common with all the members of the C4–14—U series, C3—U is planar and its alkyl chain displays an all-trans configuration (Fig. 1). This contrasts with non-planar C2—U, in which the terminal methyl group is in a skew position with respect to the N—C bond.
The H-bonding network in the title compound (Fig. 2) is typical for the longer chain n-alkylurea crystal structures and consists of pairs of molecules linked across crystallographic inversion centres (N···O 2.962 (4) Å). Furthermore, each oxygen is involved in two additional H-bonds, which link adjacent urea moieties into chains along c (N···O 2.924 (3), 3.042 (3) Å). All three N···O values agree well with those in the C5–14—U series, for which the corresponding distances fall in the ranges 2.95 (1), 3.06 (2) and 2.93 (2) Å.
Each chain is propogated by a c-glide operation and planes containing adjacent urea moieties intercept at an angle of 50.14 (9)°. This value is slightly more acute than in the analogous C5–14—U structures (54.0–55.4°, except for C5—U, 57.5°). Interestingly, although the crystal packing in C4—U is somewhat different to the remainder of the series, the structure has retained the above H-bonded chains, albeit with coplanar urea moieties.
The title compound is the third member (n = 3) of the straight-chain alkylurea series, H2NCONHCnH2n + 1. Crystal structures for the analogous compounds with n = 1 (Huiszoon & Tiemessen, 1976) and n = 2, 4–14 (Hashimoto et al., 2005) have been published previously.
Data collection: COLLECT (Nonius, 1998); cell refinement: SCALEPACK (Otwinowski & Minor, 1997); data reduction: SCALEPACK and DENZO (Otwinowski & Minor, 1997); program(s) used to solve structure: SIR92 (Altomare et al., 1993); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
C4H10N2O | F(000) = 224 |
Mr = 102.14 | Dx = 1.217 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 3437 reflections |
a = 7.8473 (10) Å | θ = 2–26° |
b = 7.7271 (10) Å | µ = 0.09 mm−1 |
c = 9.2429 (14) Å | T = 150 K |
β = 95.777 (6)° | Plate, colourless |
V = 557.61 (13) Å3 | 0.3 × 0.25 × 0.02 mm |
Z = 4 |
Nonius KappaCCD diffractometer | 710 reflections with I > 2σ(I) |
CCD rotation images, thick slices scans | Rint = 0.167 |
Absorption correction: multi-scan (SORTAV; Blessing, 1995, 1997) | θmax = 25.5°, θmin = 3.4° |
Tmin = 0.925, Tmax = 1.000 | h = −9→9 |
3437 measured reflections | k = −9→9 |
1017 independent reflections | l = −9→11 |
Refinement on F2 | 0 restraints |
Least-squares matrix: full | All H-atom parameters refined |
R[F2 > 2σ(F2)] = 0.064 | w = 1/[σ2(Fo2) + (0.0469P)2 + 0.3434P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.172 | (Δ/σ)max = 0.015 |
S = 1.10 | Δρmax = 0.19 e Å−3 |
1017 reflections | Δρmin = −0.24 e Å−3 |
104 parameters |
C4H10N2O | V = 557.61 (13) Å3 |
Mr = 102.14 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 7.8473 (10) Å | µ = 0.09 mm−1 |
b = 7.7271 (10) Å | T = 150 K |
c = 9.2429 (14) Å | 0.3 × 0.25 × 0.02 mm |
β = 95.777 (6)° |
Nonius KappaCCD diffractometer | 1017 independent reflections |
Absorption correction: multi-scan (SORTAV; Blessing, 1995, 1997) | 710 reflections with I > 2σ(I) |
Tmin = 0.925, Tmax = 1.000 | Rint = 0.167 |
3437 measured reflections |
R[F2 > 2σ(F2)] = 0.064 | 0 restraints |
wR(F2) = 0.172 | All H-atom parameters refined |
S = 1.10 | Δρmax = 0.19 e Å−3 |
1017 reflections | Δρmin = −0.24 e Å−3 |
104 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.1361 (4) | 0.2221 (4) | 0.5775 (3) | 0.0316 (7) | |
C2 | 0.2539 (4) | 0.5134 (4) | 0.5468 (3) | 0.0334 (7) | |
C3 | 0.3388 (5) | 0.6552 (4) | 0.6406 (3) | 0.0383 (8) | |
C4 | 0.3912 (5) | 0.8063 (5) | 0.5506 (4) | 0.0428 (9) | |
N1 | 0.0878 (4) | 0.1021 (3) | 0.6715 (3) | 0.0390 (7) | |
N2 | 0.2076 (3) | 0.3678 (3) | 0.6358 (3) | 0.0355 (7) | |
O1 | 0.1154 (3) | 0.2001 (3) | 0.44264 (19) | 0.0365 (6) | |
H1A | 0.025 (5) | 0.005 (5) | 0.629 (4) | 0.055 (10)* | |
H1B | 0.092 (4) | 0.135 (4) | 0.772 (4) | 0.043 (9)* | |
H2A | 0.221 (4) | 0.378 (4) | 0.736 (3) | 0.029 (7)* | |
H2B | 0.328 (4) | 0.469 (4) | 0.467 (3) | 0.037 (8)* | |
H2C | 0.149 (4) | 0.564 (4) | 0.486 (3) | 0.037 (8)* | |
H3A | 0.437 (4) | 0.608 (4) | 0.702 (4) | 0.047 (9)* | |
H3B | 0.262 (5) | 0.691 (5) | 0.720 (4) | 0.060 (11)* | |
H4A | 0.286 (5) | 0.857 (5) | 0.492 (4) | 0.059 (11)* | |
H4B | 0.474 (5) | 0.771 (5) | 0.486 (4) | 0.061 (11)* | |
H4C | 0.443 (5) | 0.903 (6) | 0.610 (4) | 0.069 (12)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0314 (16) | 0.0381 (17) | 0.0255 (15) | 0.0049 (13) | 0.0038 (12) | 0.0001 (12) |
C2 | 0.0356 (16) | 0.0382 (17) | 0.0258 (14) | −0.0018 (14) | 0.0008 (12) | 0.0017 (12) |
C3 | 0.0464 (19) | 0.0381 (17) | 0.0293 (15) | −0.0034 (15) | −0.0018 (14) | 0.0018 (13) |
C4 | 0.047 (2) | 0.0408 (19) | 0.0391 (19) | −0.0076 (17) | −0.0011 (16) | −0.0006 (15) |
N1 | 0.0540 (18) | 0.0368 (14) | 0.0266 (14) | −0.0058 (13) | 0.0066 (12) | −0.0001 (11) |
N2 | 0.0480 (16) | 0.0379 (14) | 0.0205 (13) | −0.0068 (12) | 0.0020 (10) | 0.0005 (11) |
O1 | 0.0484 (14) | 0.0372 (12) | 0.0233 (11) | −0.0038 (10) | 0.0005 (9) | −0.0012 (8) |
C1—O1 | 1.252 (3) | C3—H3A | 0.98 (3) |
C1—N2 | 1.346 (4) | C3—H3B | 1.03 (4) |
C1—N1 | 1.351 (4) | C4—H4A | 1.02 (4) |
C2—N2 | 1.461 (4) | C4—H4B | 0.96 (4) |
C2—C3 | 1.510 (4) | C4—H4C | 0.99 (4) |
C2—H2B | 1.05 (3) | N1—H1A | 0.96 (4) |
C2—H2C | 1.03 (3) | N1—H1B | 0.96 (3) |
C3—C4 | 1.515 (4) | N2—H2A | 0.92 (3) |
O1—C1—N2 | 121.3 (3) | H3A—C3—H3B | 100 (3) |
O1—C1—N1 | 122.0 (3) | C3—C4—H4A | 110 (2) |
N2—C1—N1 | 116.7 (2) | C3—C4—H4B | 111 (2) |
N2—C2—C3 | 110.8 (2) | H4A—C4—H4B | 110 (3) |
N2—C2—H2B | 109.5 (17) | C3—C4—H4C | 113 (2) |
C3—C2—H2B | 113.6 (17) | H4A—C4—H4C | 106 (3) |
N2—C2—H2C | 112.0 (17) | H4B—C4—H4C | 107 (3) |
C3—C2—H2C | 108.6 (18) | C1—N1—H1A | 116 (2) |
H2B—C2—H2C | 102 (2) | C1—N1—H1B | 117 (2) |
C2—C3—C4 | 111.9 (3) | H1A—N1—H1B | 125 (3) |
C2—C3—H3A | 109.7 (19) | C1—N2—C2 | 122.4 (2) |
C4—C3—H3A | 111 (2) | C1—N2—H2A | 118.4 (18) |
C2—C3—H3B | 110 (2) | C2—N2—H2A | 119.1 (18) |
C4—C3—H3B | 113 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O1i | 0.96 (4) | 2.00 (4) | 2.962 (4) | 175 (3) |
N1—H1B···O1ii | 0.96 (3) | 2.02 (3) | 2.924 (3) | 156 (3) |
N2—H2A···O1ii | 0.92 (3) | 2.24 (3) | 3.042 (3) | 145 (2) |
Symmetry codes: (i) −x, −y, −z+1; (ii) x, −y+1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C4H10N2O |
Mr | 102.14 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 150 |
a, b, c (Å) | 7.8473 (10), 7.7271 (10), 9.2429 (14) |
β (°) | 95.777 (6) |
V (Å3) | 557.61 (13) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.3 × 0.25 × 0.02 |
Data collection | |
Diffractometer | Nonius KappaCCD |
Absorption correction | Multi-scan (SORTAV; Blessing, 1995, 1997) |
Tmin, Tmax | 0.925, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3437, 1017, 710 |
Rint | 0.167 |
(sin θ/λ)max (Å−1) | 0.606 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.064, 0.172, 1.10 |
No. of reflections | 1017 |
No. of parameters | 104 |
H-atom treatment | All H-atom parameters refined |
Δρmax, Δρmin (e Å−3) | 0.19, −0.24 |
Computer programs: COLLECT (Nonius, 1998), SCALEPACK (Otwinowski & Minor, 1997), SCALEPACK and DENZO (Otwinowski & Minor, 1997), SIR92 (Altomare et al., 1993), SHELXL97 (Sheldrick, 1997), ORTEP-3 for Windows (Farrugia, 1997), WinGX (Farrugia, 1999).
C1—O1 | 1.252 (3) | C2—N2 | 1.461 (4) |
C1—N2 | 1.346 (4) | C2—C3 | 1.510 (4) |
C1—N1 | 1.351 (4) | C3—C4 | 1.515 (4) |
O1—C1—N2 | 121.3 (3) | N2—C2—C3 | 110.8 (2) |
O1—C1—N1 | 122.0 (3) | C2—C3—C4 | 111.9 (3) |
N2—C1—N1 | 116.7 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O1i | 0.96 (4) | 2.00 (4) | 2.962 (4) | 175 (3) |
N1—H1B···O1ii | 0.96 (3) | 2.02 (3) | 2.924 (3) | 156 (3) |
N2—H2A···O1ii | 0.92 (3) | 2.24 (3) | 3.042 (3) | 145 (2) |
Symmetry codes: (i) −x, −y, −z+1; (ii) x, −y+1/2, z+1/2. |
For the purpose of this paper, n-propylurea will be referred to as C3—U in compliance with the system used by Hashimoto et al.. (2005) and is derived from the number of carbon atoms in the alkyl group, H2NCONHCnH2n+1.
In common with all the members of the C4–14—U series, C3—U is planar and its alkyl chain displays an all-trans configuration (Fig. 1). This contrasts with non-planar C2—U, in which the terminal methyl group is in a skew position with respect to the N—C bond.
The H-bonding network in the title compound (Fig. 2) is typical for the longer chain n-alkylurea crystal structures and consists of pairs of molecules linked across crystallographic inversion centres (N···O 2.962 (4) Å). Furthermore, each oxygen is involved in two additional H-bonds, which link adjacent urea moieties into chains along c (N···O 2.924 (3), 3.042 (3) Å). All three N···O values agree well with those in the C5–14—U series, for which the corresponding distances fall in the ranges 2.95 (1), 3.06 (2) and 2.93 (2) Å.
Each chain is propogated by a c-glide operation and planes containing adjacent urea moieties intercept at an angle of 50.14 (9)°. This value is slightly more acute than in the analogous C5–14—U structures (54.0–55.4°, except for C5—U, 57.5°). Interestingly, although the crystal packing in C4—U is somewhat different to the remainder of the series, the structure has retained the above H-bonded chains, albeit with coplanar urea moieties.