Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807051367/pv2037sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807051367/pv2037Isup2.hkl |
CCDC reference: 669144
Key indicators
- Single-crystal X-ray study
- T = 173 K
- Mean (C-C) = 0.006 Å
- R factor = 0.046
- wR factor = 0.116
- Data-to-parameter ratio = 16.6
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT062_ALERT_4_C Rescale T(min) & T(max) by ..................... 0.95 PLAT420_ALERT_2_C D-H Without Acceptor N2 - H2A ... ? PLAT480_ALERT_4_C Long H...A H-Bond Reported H2A .. O2 .. 2.61 Ang.
Alert level G REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 27.57 From the CIF: _reflns_number_total 2135 Count of symmetry unique reflns 1278 Completeness (_total/calc) 167.06% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 857 Fraction of Friedel pairs measured 0.671 Are heavy atom types Z>Si present yes
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 3 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 3 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
A mixture of ethyl 2-bromo-5-methoxybenzoate (25.9 g, 0.1 mol) and 5.5 ml of hydrazine hydrate in 100 ml of ethanol was refluxed over water bath for 4 h. The precipitate formed was filtered and recrystallized from a mixture (8:2) of ethanol and toluene (m.p.:433–435 K). Analysis for C8H9BrN2O2: Found (Calculated): C: 39.14 (39.21); H: 3.66 (3.70); N: 11.39% (11.43%).
H atoms were refined with fixed individual displacement parameters [U(H) = 1.2 Ueq(C,N) or U(H) = 1.5 Ueq(Cmethyl)] using a riding model with C—H(aromatic) = 0.95 Å or C—H(methyl) = 0.98 Å, respectively. The methyl group was allowed to rotate but not to tip. The coordinates of the amino H atoms were refined.
Hydrazides are useful precursors in the synthesis of several heterocyclic systems (Narayana, Vijayaraj et al., 2005; Narayana, Ashalatha et al., 2005). Some substituted hydrazides are reported to exhibit carcinostatic activity (Cajocorius et al., 1977) against several types of tumors and also possess antimicrobial activity (Swain, 1959 & Liu et al., 2006). They are also used as intermediates in many pharmaceutically important compounds. Structures of maleic hydrazide (Katrusiak, 1993), isonicotinic acid hydrazide (Bhat et al., 1974) and N,N-dimethyl-N'-(o-fluorobenzoyl)hydrazide (Muir & Morris, 2003) have been reported. Recently the structure of 2-bromo-N'-isopropylidene-5-methoxybenzohydrazide was reported (Sarojini et al., 2007). In view of the importance of hydrazides, a new hydrazide, (I), C8H9BrN2O2, has been synthesized and its crystal structure is reported.
Geometric parameters of the title compound are in the usual ranges. The amide bond is in a cis conformation. The N—N—C=O moiety is planar [torsion angle N2—N1—C7—O1 0.6 (6)°] and forms a dihedral angle of 46.4 (2)° with the aromatic ring. The crystal packing is stabilized by two strong and one rather weak N—H···O hydrogen bonds.
For related structures, see: Anitha et al. (2005); Freeman & Bugg (1974); Jethmalani et al. (1996); Yathirajan et al. (2007). For related literature, see: Kagabu et al. (1998); Aranda & Morlock (2006). None of the refs in this (the original) Related literature section have been provided and none are mentioned elsewhere; shoud this be replaced with the following?
For related literature, see: Bhat et al. (1974); Cajocorius et al. (1977); Katrusiak (1993); Liu et al. (2006); Muir & Morris (2003); Narayana, Ashalatha et al. (2005); Narayana, Vijayaraj et al. (2005); Sarojini et al. (2007); Swain (1959).
Data collection: X-AREA (Stoe & Cie, 2001); cell refinement: X-AREA (Stoe & Cie, 2001); data reduction: X-AREA (Stoe & Cie, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 1990); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: XP in SHELXTL-Plus (Sheldrick, 1991); software used to prepare material for publication: SHELXL97 (Sheldrick, 1997).
Fig. 1. Perspective view of the title compound with the atom numbering; displacement ellipsoids are plotted at the 50% probability level. |
C8H9BrN2O2 | F(000) = 488 |
Mr = 245.08 | Dx = 1.759 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 6028 reflections |
a = 5.0150 (5) Å | θ = 3.7–27.1° |
b = 11.4093 (10) Å | µ = 4.41 mm−1 |
c = 16.1736 (14) Å | T = 173 K |
V = 925.42 (15) Å3 | Block, colourless |
Z = 4 | 0.32 × 0.27 × 0.23 mm |
Stoe IPDSII two-circle diffractometer | 2135 independent reflections |
Radiation source: fine-focus sealed tube | 2008 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.070 |
ω scans | θmax = 27.6°, θmin = 3.6° |
Absorption correction: multi-scan (MULABS; Spek, 2003; Blessing, 1995) | h = −6→5 |
Tmin = 0.263, Tmax = 0.380 | k = −14→14 |
7646 measured reflections | l = −21→21 |
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
R[F2 > 2σ(F2)] = 0.046 | w = 1/[σ2(Fo2) + (0.0796P)2] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.116 | (Δ/σ)max < 0.001 |
S = 1.04 | Δρmax = 0.95 e Å−3 |
2135 reflections | Δρmin = −0.94 e Å−3 |
129 parameters | Extinction correction: SHELXL97 (Sheldrick, 1997), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
0 restraints | Extinction coefficient: 0.025 (4) |
Primary atom site location: structure-invariant direct methods | Absolute structure: Flack (1983), 862 Friedel pairs |
Secondary atom site location: difference Fourier map | Absolute structure parameter: −0.014 (17) |
C8H9BrN2O2 | V = 925.42 (15) Å3 |
Mr = 245.08 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 5.0150 (5) Å | µ = 4.41 mm−1 |
b = 11.4093 (10) Å | T = 173 K |
c = 16.1736 (14) Å | 0.32 × 0.27 × 0.23 mm |
Stoe IPDSII two-circle diffractometer | 2135 independent reflections |
Absorption correction: multi-scan (MULABS; Spek, 2003; Blessing, 1995) | 2008 reflections with I > 2σ(I) |
Tmin = 0.263, Tmax = 0.380 | Rint = 0.070 |
7646 measured reflections |
R[F2 > 2σ(F2)] = 0.046 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.116 | Δρmax = 0.95 e Å−3 |
S = 1.04 | Δρmin = −0.94 e Å−3 |
2135 reflections | Absolute structure: Flack (1983), 862 Friedel pairs |
129 parameters | Absolute structure parameter: −0.014 (17) |
0 restraints |
Experimental. ; |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Br1 | 1.19431 (9) | 0.27433 (4) | 0.41643 (3) | 0.02729 (19) | |
O1 | 1.0833 (6) | 0.5462 (3) | 0.4178 (2) | 0.0235 (6) | |
O2 | 0.4447 (7) | 0.3871 (3) | 0.13391 (18) | 0.0249 (7) | |
N1 | 0.6358 (7) | 0.5633 (3) | 0.4286 (2) | 0.0173 (7) | |
H1 | 0.471 (12) | 0.537 (5) | 0.414 (4) | 0.021* | |
N2 | 0.6506 (8) | 0.6559 (3) | 0.4876 (2) | 0.0207 (7) | |
H2A | 0.694 (13) | 0.714 (5) | 0.462 (4) | 0.025* | |
H2B | 0.799 (13) | 0.634 (5) | 0.518 (3) | 0.025* | |
C1 | 0.8142 (9) | 0.4236 (3) | 0.3314 (2) | 0.0163 (7) | |
C2 | 0.9609 (9) | 0.3205 (4) | 0.3285 (3) | 0.0211 (8) | |
C3 | 0.9408 (10) | 0.2434 (4) | 0.2620 (3) | 0.0250 (9) | |
H3 | 1.0455 | 0.1740 | 0.2604 | 0.030* | |
C4 | 0.7651 (9) | 0.2693 (4) | 0.1979 (3) | 0.0240 (9) | |
H4 | 0.7510 | 0.2179 | 0.1519 | 0.029* | |
C5 | 0.6095 (9) | 0.3707 (4) | 0.2009 (2) | 0.0196 (8) | |
C6 | 0.6336 (8) | 0.4478 (4) | 0.2672 (2) | 0.0168 (8) | |
H6 | 0.5279 | 0.5168 | 0.2690 | 0.020* | |
C7 | 0.8561 (9) | 0.5152 (4) | 0.3976 (2) | 0.0165 (8) | |
C8 | 0.2815 (11) | 0.4903 (4) | 0.1332 (3) | 0.0266 (10) | |
H8A | 0.1511 | 0.4860 | 0.1782 | 0.040* | |
H8B | 0.1878 | 0.4958 | 0.0801 | 0.040* | |
H8C | 0.3941 | 0.5597 | 0.1407 | 0.040* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.0261 (3) | 0.0310 (3) | 0.0248 (2) | 0.00662 (19) | −0.00015 (18) | 0.00917 (16) |
O1 | 0.0107 (13) | 0.0321 (15) | 0.0278 (15) | −0.0018 (12) | 0.0003 (14) | −0.0065 (14) |
O2 | 0.0269 (18) | 0.0347 (17) | 0.0130 (13) | 0.0016 (15) | −0.0039 (12) | −0.0064 (12) |
N1 | 0.0085 (17) | 0.0267 (17) | 0.0167 (15) | −0.0009 (13) | −0.0030 (12) | −0.0070 (13) |
N2 | 0.0200 (19) | 0.0257 (18) | 0.0163 (15) | −0.0004 (15) | −0.0033 (14) | −0.0070 (13) |
C1 | 0.0131 (18) | 0.0242 (18) | 0.0114 (15) | −0.0030 (17) | 0.0014 (16) | 0.0010 (13) |
C2 | 0.022 (2) | 0.0241 (19) | 0.0177 (17) | −0.0023 (17) | 0.0042 (16) | 0.0059 (16) |
C3 | 0.028 (2) | 0.0171 (19) | 0.030 (2) | 0.0057 (16) | 0.0073 (19) | 0.0016 (16) |
C4 | 0.025 (2) | 0.0252 (19) | 0.0213 (18) | −0.0005 (18) | 0.0056 (16) | −0.0063 (16) |
C5 | 0.017 (2) | 0.028 (2) | 0.0132 (16) | −0.0017 (17) | 0.0026 (14) | −0.0052 (15) |
C6 | 0.014 (2) | 0.0214 (18) | 0.0152 (17) | 0.0000 (14) | 0.0047 (14) | −0.0030 (14) |
C7 | 0.015 (2) | 0.0218 (18) | 0.0132 (17) | 0.0011 (15) | 0.0011 (14) | 0.0016 (13) |
C8 | 0.025 (2) | 0.034 (2) | 0.0202 (18) | 0.002 (2) | −0.0069 (18) | −0.0035 (16) |
Br1—C2 | 1.916 (4) | C1—C7 | 1.511 (5) |
O1—C7 | 1.237 (6) | C2—C3 | 1.393 (6) |
O2—C5 | 1.376 (5) | C3—C4 | 1.393 (6) |
O2—C8 | 1.434 (6) | C3—H3 | 0.9500 |
N1—C7 | 1.332 (5) | C4—C5 | 1.396 (6) |
N1—N2 | 1.426 (5) | C4—H4 | 0.9500 |
N1—H1 | 0.91 (6) | C5—C6 | 1.391 (5) |
N2—H2A | 0.81 (6) | C6—H6 | 0.9500 |
N2—H2B | 0.92 (6) | C8—H8A | 0.9800 |
C1—C2 | 1.388 (6) | C8—H8B | 0.9800 |
C1—C6 | 1.405 (6) | C8—H8C | 0.9800 |
C5—O2—C8 | 117.5 (3) | C3—C4—H4 | 119.9 |
C7—N1—N2 | 121.0 (3) | C5—C4—H4 | 119.9 |
C7—N1—H1 | 121 (4) | O2—C5—C6 | 125.0 (4) |
N2—N1—H1 | 118 (4) | O2—C5—C4 | 114.9 (4) |
N1—N2—H2A | 107 (4) | C6—C5—C4 | 120.1 (4) |
N1—N2—H2B | 101 (3) | C5—C6—C1 | 120.1 (4) |
H2A—N2—H2B | 106 (6) | C5—C6—H6 | 120.0 |
C2—C1—C6 | 118.9 (4) | C1—C6—H6 | 120.0 |
C2—C1—C7 | 122.5 (4) | O1—C7—N1 | 123.1 (4) |
C6—C1—C7 | 118.5 (4) | O1—C7—C1 | 120.9 (4) |
C1—C2—C3 | 121.6 (4) | N1—C7—C1 | 115.9 (4) |
C1—C2—Br1 | 122.1 (3) | O2—C8—H8A | 109.5 |
C3—C2—Br1 | 116.3 (3) | O2—C8—H8B | 109.5 |
C2—C3—C4 | 119.1 (4) | H8A—C8—H8B | 109.5 |
C2—C3—H3 | 120.5 | O2—C8—H8C | 109.5 |
C4—C3—H3 | 120.5 | H8A—C8—H8C | 109.5 |
C3—C4—C5 | 120.2 (4) | H8B—C8—H8C | 109.5 |
C6—C1—C2—C3 | 2.7 (6) | O2—C5—C6—C1 | −178.2 (4) |
C7—C1—C2—C3 | −172.7 (4) | C4—C5—C6—C1 | −0.2 (6) |
C6—C1—C2—Br1 | −175.7 (3) | C2—C1—C6—C5 | −1.9 (6) |
C7—C1—C2—Br1 | 9.0 (6) | C7—C1—C6—C5 | 173.7 (4) |
C1—C2—C3—C4 | −1.4 (7) | N2—N1—C7—O1 | 0.6 (6) |
Br1—C2—C3—C4 | 177.1 (3) | N2—N1—C7—C1 | −176.0 (3) |
C2—C3—C4—C5 | −0.7 (7) | C2—C1—C7—O1 | 45.0 (6) |
C8—O2—C5—C6 | −1.4 (6) | C6—C1—C7—O1 | −130.4 (4) |
C8—O2—C5—C4 | −179.5 (4) | C2—C1—C7—N1 | −138.3 (4) |
C3—C4—C5—O2 | 179.7 (4) | C6—C1—C7—N1 | 46.3 (5) |
C3—C4—C5—C6 | 1.5 (7) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1i | 0.91 (6) | 1.95 (6) | 2.783 (5) | 152 (5) |
N2—H2A···O2ii | 0.81 (6) | 2.61 (6) | 3.324 (5) | 148 (6) |
N2—H2B···O2iii | 0.92 (6) | 2.29 (6) | 3.156 (5) | 156 (5) |
Symmetry codes: (i) x−1, y, z; (ii) −x+1, y+1/2, −z+1/2; (iii) −x+3/2, −y+1, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C8H9BrN2O2 |
Mr | 245.08 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 173 |
a, b, c (Å) | 5.0150 (5), 11.4093 (10), 16.1736 (14) |
V (Å3) | 925.42 (15) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 4.41 |
Crystal size (mm) | 0.32 × 0.27 × 0.23 |
Data collection | |
Diffractometer | Stoe IPDSII two-circle |
Absorption correction | Multi-scan (MULABS; Spek, 2003; Blessing, 1995) |
Tmin, Tmax | 0.263, 0.380 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7646, 2135, 2008 |
Rint | 0.070 |
(sin θ/λ)max (Å−1) | 0.651 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.046, 0.116, 1.04 |
No. of reflections | 2135 |
No. of parameters | 129 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.95, −0.94 |
Absolute structure | Flack (1983), 862 Friedel pairs |
Absolute structure parameter | −0.014 (17) |
Computer programs: X-AREA (Stoe & Cie, 2001), SHELXS97 (Sheldrick, 1990), SHELXL97 (Sheldrick, 1997), XP in SHELXTL-Plus (Sheldrick, 1991).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1i | 0.91 (6) | 1.95 (6) | 2.783 (5) | 152 (5) |
N2—H2A···O2ii | 0.81 (6) | 2.61 (6) | 3.324 (5) | 148 (6) |
N2—H2B···O2iii | 0.92 (6) | 2.29 (6) | 3.156 (5) | 156 (5) |
Symmetry codes: (i) x−1, y, z; (ii) −x+1, y+1/2, −z+1/2; (iii) −x+3/2, −y+1, z+1/2. |
Hydrazides are useful precursors in the synthesis of several heterocyclic systems (Narayana, Vijayaraj et al., 2005; Narayana, Ashalatha et al., 2005). Some substituted hydrazides are reported to exhibit carcinostatic activity (Cajocorius et al., 1977) against several types of tumors and also possess antimicrobial activity (Swain, 1959 & Liu et al., 2006). They are also used as intermediates in many pharmaceutically important compounds. Structures of maleic hydrazide (Katrusiak, 1993), isonicotinic acid hydrazide (Bhat et al., 1974) and N,N-dimethyl-N'-(o-fluorobenzoyl)hydrazide (Muir & Morris, 2003) have been reported. Recently the structure of 2-bromo-N'-isopropylidene-5-methoxybenzohydrazide was reported (Sarojini et al., 2007). In view of the importance of hydrazides, a new hydrazide, (I), C8H9BrN2O2, has been synthesized and its crystal structure is reported.
Geometric parameters of the title compound are in the usual ranges. The amide bond is in a cis conformation. The N—N—C=O moiety is planar [torsion angle N2—N1—C7—O1 0.6 (6)°] and forms a dihedral angle of 46.4 (2)° with the aromatic ring. The crystal packing is stabilized by two strong and one rather weak N—H···O hydrogen bonds.