Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807052105/ya2057sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536807052105/ya2057Isup2.hkl |
CCDC reference: 667227
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.004 Å
- R factor = 0.022
- wR factor = 0.046
- Data-to-parameter ratio = 22.2
checkCIF/PLATON results
No syntax errors found
Alert level B PLAT232_ALERT_2_B Hirshfeld Test Diff (M-X) Cd1 - O2 .. 13.09 su
Alert level C PLAT029_ALERT_3_C _diffrn_measured_fraction_theta_full Low ....... 0.97 PLAT230_ALERT_2_C Hirshfeld Test Diff for C1 - C6 .. 5.52 su PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for O2 PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for O3 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for Cd1
Alert level G REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 29.30 From the CIF: _reflns_number_total 4203 Count of symmetry unique reflns 2411 Completeness (_total/calc) 174.33% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 1792 Fraction of Friedel pairs measured 0.743 Are heavy atom types Z>Si present yes PLAT199_ALERT_1_G Check the Reported _cell_measurement_temperature 293 K PLAT200_ALERT_1_G Check the Reported _diffrn_ambient_temperature . 293 K PLAT794_ALERT_5_G Check Predicted Bond Valency for Cd1 (2) 2.04
0 ALERT level A = In general: serious problem 1 ALERT level B = Potentially serious problem 5 ALERT level C = Check and explain 4 ALERT level G = General alerts; check 2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 5 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 1 ALERT type 5 Informative message, check
The Schiff base ligand N-(salicylidene)-3-dimethylaminopropylamine was prepared by refluxing 3-dimethylamino-1-propylamine (1.0 mmol) and salicyladehyde (1.0 mmol) in ethyl alcohol (10 ml) for half an hour. Cd(CH3COO)2.2H2O (1.0 mmol) in 10 ml of ethyl alcohol was added to the ethyl alcohol solution of the ligand (1.0 mmol). A yellow mixture was obtained by refluxing for about an hour, then allowed to stand at room temperature. After several weeks yellow crystals suitable for X-ray diffraction were collected (yield 51%).
All H atoms bonded to C atoms were positioned geometrically [aromatic C—H 0.93 Å and aliphatic C—H = 0.97(methyl), 0.96(methylene) or 0.93(methylidyne) Å], and the water H atom was located in the difference Fourier map. All H atoms were included in the refinement in the riding motion approximation with Uiso(H) = 1.5Ueq(C,O) for methyl and water H atoms and Uiso(H) = 1.2Ueq(C)] for all other H atoms.
Recently there has been a growing interest in the synthesis of transition metal complexes with multidentate Schiff base ligands (Ray et al., 2004; Saha et al., 2003). Such ligands can accommodate one, two or more metal centres and thus may provide the basis for modeling of active sites of biological systems (Ikawa et al., 1993; Erxleben, 2001). Up to now many Cu(II) complexes with tridentate Schiff bases have been synthesized (Mukherjee et al., 2001; Mukherjee et al., 2002). In this paper, we report a binuclear Cd(II) complex with tridentate Schiff base N-(salicylidene)-3-dimethylaminopropylamine ligand (Fig. 1).
The crystal structure of (I) is built of binuclear neutral cadmium complexes and lattice water molecules. The complex dimeric molecule [Cd(C12H17N2O)(CH3COO)]2 occupies a special position on the twofold axis. Each CdII atom has a severely distorted octahedral coordination formed by two deprotonated bridging phenolic O atoms, imine and amine N atoms of the Schiff base, and two oxygen atoms of the chelate acetato group. The Cd1···Cd1i separation is 3.519 (6) Å and the Cd1—O1—Cd1i angle is equal to 101.40 (6)° [symmetry code (i): 0.5 - y, 0.5 - x, 1 - z].
The water H atom takes part in the H-bond involving one of the acetate oxygen atoms, O3, as an acceptor (Table 2). The water molecule, therefore, participates in two such H-bonds with one and the same complex molecule, thus producing isolated 1:1 complex molecule-water molecule aggregates in crystal.
For recent studies on complexes of multidentate Schiff bases, including their application for the modeling of active sites of biological systems, see: Erxleben (2001); Ikawa et al. (1993); Mukherjee et al. (2001); Mukherjee et al. (2002); Ray et al. (2004); Saha et al. (2003)
Data collection: APEX2 (Bruker, 2004); cell refinement: SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL (Bruker, 2002); software used to prepare material for publication: SHELXL97 (Sheldrick, 1997).
[Cd2(C12H17N2O)2(C2H3O2)2]·H2O | Dx = 1.598 Mg m−3 |
Mr = 771.46 | Mo Kα radiation, λ = 0.71073 Å |
Tetragonal, P4b2 | Cell parameters from 5789 reflections |
Hall symbol: P -4 -2ab | θ = 1.9–29.3° |
a = 17.543 (3) Å | µ = 1.37 mm−1 |
c = 10.420 (3) Å | T = 293 K |
V = 3206.8 (11) Å3 | Block, yellow |
Z = 4 | 0.26 × 0.18 × 0.15 mm |
F(000) = 1560 |
Bruker APEXII area-detector diffractometer | 4203 independent reflections |
Radiation source: fine-focus sealed tube | 3543 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.030 |
ω scans | θmax = 29.3°, θmin = 1.9° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −23→24 |
Tmin = 0.716, Tmax = 0.820 | k = −23→24 |
21724 measured reflections | l = −14→10 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.022 | H-atom parameters constrained |
wR(F2) = 0.046 | w = 1/[σ2(Fo2) + (0.0216P)2] where P = (Fo2 + 2Fc2)/3 |
S = 1.02 | (Δ/σ)max = 0.001 |
4203 reflections | Δρmax = 0.23 e Å−3 |
189 parameters | Δρmin = −0.24 e Å−3 |
0 restraints | Absolute structure: Flack (1983), 1788 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.014 (18) |
[Cd2(C12H17N2O)2(C2H3O2)2]·H2O | Z = 4 |
Mr = 771.46 | Mo Kα radiation |
Tetragonal, P4b2 | µ = 1.37 mm−1 |
a = 17.543 (3) Å | T = 293 K |
c = 10.420 (3) Å | 0.26 × 0.18 × 0.15 mm |
V = 3206.8 (11) Å3 |
Bruker APEXII area-detector diffractometer | 4203 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3543 reflections with I > 2σ(I) |
Tmin = 0.716, Tmax = 0.820 | Rint = 0.030 |
21724 measured reflections |
R[F2 > 2σ(F2)] = 0.022 | H-atom parameters constrained |
wR(F2) = 0.046 | Δρmax = 0.23 e Å−3 |
S = 1.02 | Δρmin = −0.24 e Å−3 |
4203 reflections | Absolute structure: Flack (1983), 1788 Friedel pairs |
189 parameters | Absolute structure parameter: −0.014 (18) |
0 restraints |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cd1 | 0.231751 (8) | 0.354386 (8) | 0.634193 (16) | 0.04198 (5) | |
O1 | 0.22984 (9) | 0.36177 (8) | 0.41579 (14) | 0.0451 (3) | |
O2 | 0.29307 (13) | 0.32036 (13) | 0.83507 (19) | 0.0755 (6) | |
O3 | 0.32810 (12) | 0.26684 (11) | 0.6582 (2) | 0.0729 (6) | |
O1W | 0.35631 (13) | 0.14369 (13) | 0.5000 | 0.1164 (15) | |
H1W | 0.3524 | 0.1783 | 0.5489 | 0.175* | |
N1 | 0.30084 (11) | 0.46347 (10) | 0.60836 (19) | 0.0480 (5) | |
N2 | 0.14606 (12) | 0.43888 (13) | 0.74563 (19) | 0.0531 (5) | |
C1 | 0.32474 (12) | 0.45900 (11) | 0.3765 (2) | 0.0428 (5) | |
C2 | 0.27952 (12) | 0.39507 (12) | 0.3380 (2) | 0.0409 (5) | |
C3 | 0.28801 (14) | 0.37069 (13) | 0.2108 (3) | 0.0472 (6) | |
H3A | 0.2610 | 0.3280 | 0.1838 | 0.057* | |
C4 | 0.33442 (13) | 0.40717 (14) | 0.1246 (3) | 0.0529 (6) | |
H4A | 0.3378 | 0.3891 | 0.0409 | 0.063* | |
C5 | 0.37623 (15) | 0.47056 (14) | 0.1605 (3) | 0.0568 (7) | |
H5A | 0.4067 | 0.4962 | 0.1016 | 0.068* | |
C6 | 0.37144 (13) | 0.49453 (15) | 0.2855 (2) | 0.0543 (6) | |
H6A | 0.4005 | 0.5362 | 0.3109 | 0.065* | |
C7 | 0.32879 (13) | 0.49019 (14) | 0.5056 (3) | 0.0488 (6) | |
H7A | 0.3554 | 0.5358 | 0.5138 | 0.059* | |
C8 | 0.31653 (15) | 0.50458 (18) | 0.7280 (2) | 0.0630 (8) | |
H8A | 0.3549 | 0.5432 | 0.7120 | 0.076* | |
H8B | 0.3369 | 0.4692 | 0.7909 | 0.076* | |
C9 | 0.24522 (17) | 0.54242 (17) | 0.7824 (3) | 0.0687 (8) | |
H9A | 0.2212 | 0.5718 | 0.7147 | 0.082* | |
H9B | 0.2605 | 0.5778 | 0.8491 | 0.082* | |
C10 | 0.18630 (15) | 0.48761 (16) | 0.8382 (2) | 0.0650 (8) | |
H10A | 0.2117 | 0.4550 | 0.9000 | 0.078* | |
H10B | 0.1487 | 0.5173 | 0.8847 | 0.078* | |
C11 | 0.08785 (16) | 0.39618 (17) | 0.8156 (3) | 0.0764 (9) | |
H11A | 0.0521 | 0.4311 | 0.8533 | 0.115* | |
H11B | 0.1116 | 0.3666 | 0.8821 | 0.115* | |
H11C | 0.0616 | 0.3628 | 0.7576 | 0.115* | |
C12 | 0.10697 (15) | 0.48511 (18) | 0.6487 (3) | 0.0777 (8) | |
H12A | 0.0741 | 0.5211 | 0.6904 | 0.116* | |
H12B | 0.0772 | 0.4526 | 0.5941 | 0.116* | |
H12C | 0.1440 | 0.5119 | 0.5981 | 0.116* | |
C13 | 0.33258 (17) | 0.27384 (17) | 0.7767 (3) | 0.0612 (7) | |
C14 | 0.38725 (18) | 0.22233 (18) | 0.8470 (4) | 0.0854 (10) | |
H14A | 0.4368 | 0.2454 | 0.8489 | 0.128* | |
H14B | 0.3902 | 0.1741 | 0.8038 | 0.128* | |
H14C | 0.3696 | 0.2147 | 0.9333 | 0.128* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cd1 | 0.04226 (9) | 0.04557 (9) | 0.03810 (8) | −0.00513 (7) | −0.00350 (8) | −0.00795 (8) |
O1 | 0.0479 (10) | 0.0484 (10) | 0.0390 (7) | −0.0141 (7) | −0.0023 (7) | −0.0046 (7) |
O2 | 0.0807 (13) | 0.0862 (15) | 0.0596 (14) | 0.0015 (12) | −0.0111 (11) | −0.0070 (11) |
O3 | 0.0770 (13) | 0.0799 (14) | 0.0617 (14) | 0.0208 (10) | −0.0223 (11) | −0.0109 (11) |
O1W | 0.126 (2) | 0.126 (2) | 0.096 (3) | 0.060 (2) | −0.010 (2) | −0.010 (2) |
N1 | 0.0443 (10) | 0.0502 (10) | 0.0495 (13) | −0.0073 (8) | −0.0016 (9) | −0.0160 (9) |
N2 | 0.0466 (12) | 0.0550 (13) | 0.0577 (13) | −0.0027 (9) | 0.0051 (9) | −0.0113 (10) |
C1 | 0.0417 (10) | 0.0389 (11) | 0.0477 (12) | 0.0012 (8) | 0.0027 (11) | 0.0012 (11) |
C2 | 0.0401 (11) | 0.0407 (12) | 0.0420 (14) | 0.0019 (9) | −0.0041 (9) | −0.0015 (9) |
C3 | 0.0491 (13) | 0.0496 (14) | 0.0429 (14) | 0.0043 (10) | −0.0050 (11) | −0.0025 (11) |
C4 | 0.0545 (13) | 0.0636 (15) | 0.0405 (13) | 0.0120 (11) | −0.0002 (12) | 0.0050 (13) |
C5 | 0.0582 (14) | 0.0570 (15) | 0.0553 (17) | 0.0029 (12) | 0.0090 (12) | 0.0120 (12) |
C6 | 0.0554 (15) | 0.0452 (14) | 0.0623 (15) | −0.0043 (11) | 0.0012 (12) | 0.0029 (13) |
C7 | 0.0456 (14) | 0.0402 (13) | 0.0604 (15) | −0.0063 (11) | 0.0027 (11) | −0.0089 (12) |
C8 | 0.0590 (16) | 0.0711 (19) | 0.0590 (16) | −0.0209 (14) | 0.0052 (13) | −0.0311 (15) |
C9 | 0.0747 (19) | 0.0615 (17) | 0.0698 (19) | −0.0139 (13) | 0.0097 (16) | −0.0324 (15) |
C10 | 0.0618 (16) | 0.0729 (18) | 0.0603 (18) | −0.0035 (13) | 0.0069 (13) | −0.0263 (14) |
C11 | 0.0646 (17) | 0.0703 (19) | 0.094 (2) | −0.0121 (15) | 0.0305 (17) | −0.0211 (16) |
C12 | 0.0677 (17) | 0.0829 (19) | 0.0824 (19) | 0.0123 (15) | −0.0164 (17) | −0.0101 (19) |
C13 | 0.0589 (17) | 0.0632 (19) | 0.0614 (19) | −0.0164 (14) | −0.0203 (14) | 0.0033 (15) |
C14 | 0.087 (2) | 0.0793 (19) | 0.090 (3) | −0.0130 (16) | −0.036 (2) | 0.0237 (19) |
Cd1—O1i | 2.2685 (14) | C4—H4A | 0.9300 |
Cd1—O1 | 2.2797 (16) | C5—C6 | 1.371 (3) |
Cd1—N1 | 2.2812 (19) | C5—H5A | 0.9300 |
Cd1—O3 | 2.2976 (19) | C6—H6A | 0.9300 |
Cd1—N2 | 2.409 (2) | C7—H7A | 0.9300 |
Cd1—O2 | 2.428 (2) | C8—C9 | 1.525 (4) |
Cd1—C13 | 2.707 (3) | C8—H8A | 0.9700 |
O1—C2 | 1.326 (3) | C8—H8B | 0.9700 |
O1—Cd1i | 2.2685 (14) | C9—C10 | 1.527 (4) |
O2—C13 | 1.232 (4) | C9—H9A | 0.9700 |
O3—C13 | 1.243 (4) | C9—H9B | 0.9700 |
O1W—H1W | 0.7950 | C10—H10A | 0.9700 |
N1—C7 | 1.268 (3) | C10—H10B | 0.9700 |
N1—C8 | 1.466 (3) | C11—H11A | 0.9600 |
N2—C11 | 1.462 (3) | C11—H11B | 0.9600 |
N2—C12 | 1.466 (3) | C11—H11C | 0.9600 |
N2—C10 | 1.470 (3) | C12—H12A | 0.9600 |
C1—C6 | 1.400 (3) | C12—H12B | 0.9600 |
C1—C2 | 1.431 (3) | C12—H12C | 0.9600 |
C1—C7 | 1.454 (3) | C13—C14 | 1.508 (4) |
C2—C3 | 1.400 (3) | C14—H14A | 0.9600 |
C3—C4 | 1.371 (4) | C14—H14B | 0.9600 |
C3—H3A | 0.9300 | C14—H14C | 0.9600 |
C4—C5 | 1.384 (3) | ||
O1i—Cd1—O1 | 78.30 (6) | C4—C5—H5A | 121.0 |
O1i—Cd1—N1 | 154.63 (6) | C5—C6—C1 | 122.9 (2) |
O1—Cd1—N1 | 80.93 (6) | C5—C6—H6A | 118.6 |
O1i—Cd1—O3 | 96.99 (6) | C1—C6—H6A | 118.6 |
O1—Cd1—O3 | 99.08 (7) | N1—C7—C1 | 128.6 (2) |
N1—Cd1—O3 | 100.53 (7) | N1—C7—H7A | 115.7 |
O1i—Cd1—N2 | 93.45 (6) | C1—C7—H7A | 115.7 |
O1—Cd1—N2 | 115.91 (7) | N1—C8—C9 | 112.1 (2) |
N1—Cd1—N2 | 82.66 (7) | N1—C8—H8A | 109.2 |
O3—Cd1—N2 | 144.85 (8) | C9—C8—H8A | 109.2 |
O1i—Cd1—O2 | 110.99 (6) | N1—C8—H8B | 109.2 |
O1—Cd1—O2 | 151.78 (7) | C9—C8—H8B | 109.2 |
N1—Cd1—O2 | 94.16 (7) | H8A—C8—H8B | 107.9 |
O3—Cd1—O2 | 54.24 (8) | C8—C9—C10 | 115.0 (2) |
N2—Cd1—O2 | 90.70 (8) | C8—C9—H9A | 108.5 |
O1i—Cd1—C13 | 104.98 (7) | C10—C9—H9A | 108.5 |
O1—Cd1—C13 | 125.93 (9) | C8—C9—H9B | 108.5 |
N1—Cd1—C13 | 98.94 (7) | C10—C9—H9B | 108.5 |
O3—Cd1—C13 | 27.20 (9) | H9A—C9—H9B | 107.5 |
N2—Cd1—C13 | 117.67 (9) | N2—C10—C9 | 116.2 (2) |
O2—Cd1—C13 | 27.06 (8) | N2—C10—H10A | 108.2 |
C2—O1—Cd1i | 127.33 (13) | C9—C10—H10A | 108.2 |
C2—O1—Cd1 | 128.73 (13) | N2—C10—H10B | 108.2 |
Cd1i—O1—Cd1 | 101.40 (6) | C9—C10—H10B | 108.2 |
C13—O2—Cd1 | 89.22 (17) | H10A—C10—H10B | 107.4 |
C13—O3—Cd1 | 95.09 (19) | N2—C11—H11A | 109.5 |
C7—N1—C8 | 117.6 (2) | N2—C11—H11B | 109.5 |
C7—N1—Cd1 | 127.97 (16) | H11A—C11—H11B | 109.5 |
C8—N1—Cd1 | 114.34 (16) | N2—C11—H11C | 109.5 |
C11—N2—C12 | 107.5 (2) | H11A—C11—H11C | 109.5 |
C11—N2—C10 | 107.8 (2) | H11B—C11—H11C | 109.5 |
C12—N2—C10 | 110.8 (2) | N2—C12—H12A | 109.5 |
C11—N2—Cd1 | 111.17 (16) | N2—C12—H12B | 109.5 |
C12—N2—Cd1 | 107.47 (15) | H12A—C12—H12B | 109.5 |
C10—N2—Cd1 | 112.01 (16) | N2—C12—H12C | 109.5 |
C6—C1—C2 | 118.9 (2) | H12A—C12—H12C | 109.5 |
C6—C1—C7 | 115.5 (2) | H12B—C12—H12C | 109.5 |
C2—C1—C7 | 125.5 (2) | O2—C13—O3 | 121.4 (3) |
O1—C2—C3 | 120.9 (2) | O2—C13—C14 | 121.0 (3) |
O1—C2—C1 | 122.6 (2) | O3—C13—C14 | 117.6 (3) |
C3—C2—C1 | 116.4 (2) | O2—C13—Cd1 | 63.73 (15) |
C4—C3—C2 | 122.7 (2) | O3—C13—Cd1 | 57.70 (15) |
C4—C3—H3A | 118.6 | C14—C13—Cd1 | 174.2 (2) |
C2—C3—H3A | 118.6 | C13—C14—H14A | 109.5 |
C3—C4—C5 | 120.8 (3) | C13—C14—H14B | 109.5 |
C3—C4—H4A | 119.6 | H14A—C14—H14B | 109.5 |
C5—C4—H4A | 119.6 | C13—C14—H14C | 109.5 |
C6—C5—C4 | 118.1 (2) | H14A—C14—H14C | 109.5 |
C6—C5—H5A | 121.0 | H14B—C14—H14C | 109.5 |
O1i—Cd1—O1—C2 | −168.64 (14) | O1i—Cd1—N2—C10 | 157.39 (17) |
N1—Cd1—O1—C2 | 26.00 (17) | O1—Cd1—N2—C10 | −123.95 (16) |
O3—Cd1—O1—C2 | −73.32 (17) | N1—Cd1—N2—C10 | −47.79 (17) |
N2—Cd1—O1—C2 | 103.21 (17) | O3—Cd1—N2—C10 | 50.1 (2) |
O2—Cd1—O1—C2 | −55.8 (2) | O2—Cd1—N2—C10 | 46.31 (17) |
C13—Cd1—O1—C2 | −68.51 (19) | C13—Cd1—N2—C10 | 48.49 (19) |
O1i—Cd1—O1—Cd1i | −5.94 (8) | Cd1i—O1—C2—C3 | −4.0 (3) |
N1—Cd1—O1—Cd1i | −171.30 (8) | Cd1—O1—C2—C3 | 154.54 (16) |
O3—Cd1—O1—Cd1i | 89.38 (8) | Cd1i—O1—C2—C1 | 173.45 (14) |
N2—Cd1—O1—Cd1i | −94.09 (8) | Cd1—O1—C2—C1 | −28.1 (3) |
O2—Cd1—O1—Cd1i | 106.87 (13) | C6—C1—C2—O1 | −175.0 (2) |
C13—Cd1—O1—Cd1i | 94.19 (9) | C7—C1—C2—O1 | 7.0 (3) |
O1i—Cd1—O2—C13 | 81.80 (18) | C6—C1—C2—C3 | 2.5 (3) |
O1—Cd1—O2—C13 | −23.0 (2) | C7—C1—C2—C3 | −175.5 (2) |
N1—Cd1—O2—C13 | −101.55 (17) | O1—C2—C3—C4 | 174.9 (2) |
O3—Cd1—O2—C13 | −1.56 (17) | C1—C2—C3—C4 | −2.6 (3) |
N2—Cd1—O2—C13 | 175.76 (17) | C2—C3—C4—C5 | 0.5 (4) |
O1i—Cd1—O3—C13 | −109.33 (18) | C3—C4—C5—C6 | 1.7 (4) |
O1—Cd1—O3—C13 | 171.47 (17) | C4—C5—C6—C1 | −1.8 (4) |
N1—Cd1—O3—C13 | 89.09 (18) | C2—C1—C6—C5 | −0.3 (4) |
N2—Cd1—O3—C13 | −3.1 (3) | C7—C1—C6—C5 | 177.8 (2) |
O2—Cd1—O3—C13 | 1.55 (16) | C8—N1—C7—C1 | 177.0 (2) |
O1i—Cd1—N1—C7 | −47.2 (3) | Cd1—N1—C7—C1 | −0.1 (4) |
O1—Cd1—N1—C7 | −11.9 (2) | C6—C1—C7—N1 | −170.0 (2) |
O3—Cd1—N1—C7 | 85.7 (2) | C2—C1—C7—N1 | 8.0 (4) |
N2—Cd1—N1—C7 | −129.7 (2) | C7—N1—C8—C9 | 111.1 (3) |
O2—Cd1—N1—C7 | 140.1 (2) | Cd1—N1—C8—C9 | −71.4 (3) |
C13—Cd1—N1—C7 | 113.3 (2) | N1—C8—C9—C10 | 71.1 (3) |
O1i—Cd1—N1—C8 | 135.62 (19) | C11—N2—C10—C9 | −174.9 (3) |
O1—Cd1—N1—C8 | 170.92 (19) | C12—N2—C10—C9 | −57.5 (3) |
O3—Cd1—N1—C8 | −91.45 (18) | Cd1—N2—C10—C9 | 62.5 (3) |
N2—Cd1—N1—C8 | 53.10 (18) | C8—C9—C10—N2 | −69.1 (3) |
O2—Cd1—N1—C8 | −37.07 (19) | Cd1—O2—C13—O3 | 2.7 (3) |
C13—Cd1—N1—C8 | −63.89 (19) | Cd1—O2—C13—C14 | −176.2 (2) |
O1i—Cd1—N2—C11 | 36.70 (19) | Cd1—O3—C13—O2 | −2.9 (3) |
O1—Cd1—N2—C11 | 115.36 (18) | Cd1—O3—C13—C14 | 176.1 (2) |
N1—Cd1—N2—C11 | −168.48 (19) | O1i—Cd1—C13—O2 | −106.95 (17) |
O3—Cd1—N2—C11 | −70.6 (2) | O1—Cd1—C13—O2 | 166.80 (15) |
O2—Cd1—N2—C11 | −74.38 (19) | N1—Cd1—C13—O2 | 81.57 (17) |
C13—Cd1—N2—C11 | −72.2 (2) | O3—Cd1—C13—O2 | 177.2 (3) |
O1i—Cd1—N2—C12 | −80.67 (17) | N2—Cd1—C13—O2 | −4.79 (19) |
O1—Cd1—N2—C12 | −2.01 (18) | O1i—Cd1—C13—O3 | 75.83 (18) |
N1—Cd1—N2—C12 | 74.14 (17) | O1—Cd1—C13—O3 | −10.4 (2) |
O3—Cd1—N2—C12 | 172.03 (16) | N1—Cd1—C13—O3 | −95.66 (18) |
O2—Cd1—N2—C12 | 168.25 (17) | N2—Cd1—C13—O3 | 177.98 (17) |
C13—Cd1—N2—C12 | 170.43 (16) | O2—Cd1—C13—O3 | −177.2 (3) |
Symmetry code: (i) −y+1/2, −x+1/2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | [Cd2(C12H17N2O)2(C2H3O2)2]·H2O |
Mr | 771.46 |
Crystal system, space group | Tetragonal, P4b2 |
Temperature (K) | 293 |
a, c (Å) | 17.543 (3), 10.420 (3) |
V (Å3) | 3206.8 (11) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.37 |
Crystal size (mm) | 0.26 × 0.18 × 0.15 |
Data collection | |
Diffractometer | Bruker APEXII area-detector |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.716, 0.820 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 21724, 4203, 3543 |
Rint | 0.030 |
(sin θ/λ)max (Å−1) | 0.689 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.022, 0.046, 1.02 |
No. of reflections | 4203 |
No. of parameters | 189 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.23, −0.24 |
Absolute structure | Flack (1983), 1788 Friedel pairs |
Absolute structure parameter | −0.014 (18) |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL (Bruker, 2002).
Cd1—O1i | 2.2685 (14) | Cd1—O3 | 2.2976 (19) |
Cd1—O1 | 2.2797 (16) | Cd1—N2 | 2.409 (2) |
Cd1—N1 | 2.2812 (19) | Cd1—O2 | 2.428 (2) |
O1i—Cd1—O1 | 78.30 (6) | N1—Cd1—N2 | 82.66 (7) |
O1i—Cd1—N1 | 154.63 (6) | O3—Cd1—N2 | 144.85 (8) |
O1—Cd1—N1 | 80.93 (6) | O1i—Cd1—O2 | 110.99 (6) |
O1i—Cd1—O3 | 96.99 (6) | O1—Cd1—O2 | 151.78 (7) |
O1—Cd1—O3 | 99.08 (7) | N1—Cd1—O2 | 94.16 (7) |
N1—Cd1—O3 | 100.53 (7) | O3—Cd1—O2 | 54.24 (8) |
O1i—Cd1—N2 | 93.45 (6) | N2—Cd1—O2 | 90.70 (8) |
O1—Cd1—N2 | 115.91 (7) |
Symmetry code: (i) −y+1/2, −x+1/2, −z+1. |
Recently there has been a growing interest in the synthesis of transition metal complexes with multidentate Schiff base ligands (Ray et al., 2004; Saha et al., 2003). Such ligands can accommodate one, two or more metal centres and thus may provide the basis for modeling of active sites of biological systems (Ikawa et al., 1993; Erxleben, 2001). Up to now many Cu(II) complexes with tridentate Schiff bases have been synthesized (Mukherjee et al., 2001; Mukherjee et al., 2002). In this paper, we report a binuclear Cd(II) complex with tridentate Schiff base N-(salicylidene)-3-dimethylaminopropylamine ligand (Fig. 1).
The crystal structure of (I) is built of binuclear neutral cadmium complexes and lattice water molecules. The complex dimeric molecule [Cd(C12H17N2O)(CH3COO)]2 occupies a special position on the twofold axis. Each CdII atom has a severely distorted octahedral coordination formed by two deprotonated bridging phenolic O atoms, imine and amine N atoms of the Schiff base, and two oxygen atoms of the chelate acetato group. The Cd1···Cd1i separation is 3.519 (6) Å and the Cd1—O1—Cd1i angle is equal to 101.40 (6)° [symmetry code (i): 0.5 - y, 0.5 - x, 1 - z].
The water H atom takes part in the H-bond involving one of the acetate oxygen atoms, O3, as an acceptor (Table 2). The water molecule, therefore, participates in two such H-bonds with one and the same complex molecule, thus producing isolated 1:1 complex molecule-water molecule aggregates in crystal.