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Journal logoCRYSTALLOGRAPHIC
COMMUNICATIONS
ISSN: 2056-9890

Methyl 4-(4-fluoro­phen­yl)-6-iso­propyl-2-(methylsulfonyl)pyrimidine-5-carbox­ylate

aDepartment of Applied Chemistry, College of Science, Nanjing University of Technolgy, Xinmofan Road No. 5, Nanjing 210009, People's Republic of China, and bNanjing Frochem Tech. Co. Ltd, Xinmofan Road No. 36, Nanjing 210009, People's Republic of China
*Correspondence e-mail: guocheng@njut.edu.cn

(Received 23 April 2008; accepted 7 May 2008; online 21 May 2008)

The asymmetric unit of the title compound, C16H17FN2O4S, contains three independent mol­ecules, in which the pyrimidine and benzene rings are oriented at dihedral angles of 41.72 (3)°, 26.21 (3)° and 36.49 (3)°. Intra­molecular C—H⋯O hydrogen bonds result in the formation of two six- and one seven-membered non-planar rings, which have have twist conformations. In the crystal structure, inter­molecular C—H⋯O hydrogen bonds link the mol­ecules.

Related literature

For related literature, see: Gompper et al. (1997[Gompper, R., Mair, H.-J. & Polborn, K. (1997). Synthesis, p. 696.]); Laufer & Wagner (2002[Laufer, S. A. & Wagner, G. K. (2002). J. Med. Chem. 45, 2733-2740.]). For bond-length data, see: Allen et al. (1987[Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1-19.]).

[Scheme 1]

Experimental

Crystal data
  • C16H17FN2O4S

  • Mr = 352.39

  • Monoclinic, P 21 /c

  • a = 28.875 (6) Å

  • b = 9.887 (2) Å

  • c = 18.400 (4) Å

  • β = 98.09 (3)°

  • V = 5200.7 (18) Å3

  • Z = 12

  • Mo Kα radiation

  • μ = 0.22 mm−1

  • T = 294 (2) K

  • 0.40 × 0.20 × 0.20 mm

Data collection
  • Enraf–Nonius CAD-4 diffractometer

  • Absorption correction: ψ scan (North et al., 1968[North, A. C. T., Phillips, D. C. & Mathews, F. S. (1968). Acta Cryst. A24, 351-359.]) Tmin = 0.918, Tmax = 0.958

  • 10466 measured reflections

  • 10124 independent reflections

  • 4777 reflections with I > 2σ(I)

  • Rint = 0.066

  • 3 standard reflections frequency: 120 min intensity decay: none

Refinement
  • R[F2 > 2σ(F2)] = 0.079

  • wR(F2) = 0.206

  • S = 1.03

  • 10124 reflections

  • 637 parameters

  • H-atom parameters constrained

  • Δρmax = 0.42 e Å−3

  • Δρmin = −0.58 e Å−3

Table 1
Hydrogen-bond geometry (Å, °)

D—H⋯A D—H H⋯A DA D—H⋯A
C3—H3B⋯O1 0.98 2.54 3.089 (7) 115
C17—H17C⋯F1 0.96 2.51 3.191 (8) 128
C19—H19A⋯O6 0.98 2.55 3.224 (7) 126
C28—H28A⋯O6 0.93 2.56 3.378 (6) 147
C8—H8B⋯O3i 0.96 2.48 3.373 (6) 155
C35—H35A⋯O12ii 0.98 2.57 3.484 (6) 154
C42—H42A⋯O9iii 0.96 2.43 3.229 (6) 141
C48—H48A⋯O12iv 0.93 2.42 3.224 (6) 146
Symmetry codes: (i) [x, -y+{\script{1\over 2}}, z-{\script{1\over 2}}]; (ii) -x+1, -y+2, -z; (iii) [x, -y+{\script{3\over 2}}, z+{\script{1\over 2}}]; (iv) [x, -y+{\script{3\over 2}}, z-{\script{1\over 2}}].

Data collection: CAD-4 Software (Enraf–Nonius, 1989[Enraf-Nonius (1989). CAD-4 Software. Enraf-Nonius, Delft, The Netherlands.]); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995[Harms, K. & Wocadlo, S. (1995). XCAD4. University of Marburg, Germany.]); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); molecular graphics: PLATON (Spek, 2003[Spek, A. L. (2003). J. Appl. Cryst. 36, 7-13.]); software used to prepare material for publication: SHELXTL (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]).

Supporting information


Comment top

Some derivatives of pyrimidine are important chemical materials. We report herein the crystal structure of the title compound, (I).

The asymmetric unit of the title compound, (I), (Fig. 1) contains three independent molecules. Rings A (N1/N2/C4-C7), B (C11-C16), C (N3/N4/C20-C23), D (C27-C32), E (N5/N6/C36-C9) and F (C43-C48) are, of course, planar, and the dihedral angles between them are A/B = 41.72 (3)°, B/C = 26.21 (3)° and D/E = 36.49 (3)°. The intramolecular C-H···O hydrogen bonds (Table 1) result in the formation of two six- and one seven-membered non-planar rings: G (O1/C3-C5/C9/H3B), H (O6/C19-C21/C25/H19A) and I (O6/C21/C22/C25/C27/C28/H28A). They adopt twisted conformations, having total puckering amplitudes, QT, of 0.788 (3) Å, 1.806 (3) Å and 1.290 (3) Å, respectively.

In the crystal structure, intermolecular C-H···O hydrogen bonds (Table 1) link the molecules (Fig. 2), in which they may be effective in the stabilization of the structure.

Related literature top

For related literature, see: Gompper et al. (1997); Laufer & Wagner (2002). For bond-length data, see: Allen et al. (1987).

Experimental top

For the preparation of the title compound, methyl4-(4-fluorophenyl)-6-isopropyl -2-(methylthio)pyrimidine-5-carboxylate (100 g, 312.50 mmol), ammonium molybdate tetrahydrate (4.95 g, 4.00 mmol) and sulfuric acid (0.32 g, 3.26 mmol) were added to methanol (1000 ml) in a round bottom flask, and then stirred for 1 h at 303 K. H2O2 (106.2 ml) was added dropwise in 30 min, and stirred for 2 h. The mixture was stirred for 5 h, by increasing the temperatue to 323 K. After completion of the reaction, the mixture was cooled to 273 K and stirred for 1 h. It was filtered, washed with water, and then dried (yield; 88%). Crystals of (I) suitable for X-ray analysis were obtained by slow evaporation of an ethanol solution.

Refinement top

H atoms were positioned geometrically, with C-H = 0.93, 0.98 and 0.96 Å for aromatic, methine and methyl H, respectively, and constrained to ride on their parent atoms with Uiso(H) = xUeq(C), where x = 1.5 for methyl H, and x = 1.2 for all other H atoms.

Computing details top

Data collection: CAD-4 Software (Enraf–Nonius, 1989); cell refinement: CAD-4 Software (Enraf–Nonius, 1989); data reduction: XCAD4 (Harms & Wocadlo, 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).

Figures top
[Figure 1] Fig. 1. The molecular structure of the title molecule, with the atom-numbering scheme. Displacement ellipsoids are drawn at the 30% probability level. Hydrogen bonds are shown as dashed lines.
[Figure 2] Fig. 2. A partial packing diagram of (I). Hydrogen bonds are shown as dashed lines.
Methyl 4-(4-fluorophenyl)-6-isopropyl-2-(methylsulfonyl)pyrimidine-5-carboxylate top
Crystal data top
C16H17FN2O4SF(000) = 2208
Mr = 352.39Dx = 1.350 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 28.875 (6) Åθ = 9–12°
b = 9.887 (2) ŵ = 0.22 mm1
c = 18.400 (4) ÅT = 294 K
β = 98.09 (3)°Block, colorless
V = 5200.7 (18) Å30.40 × 0.20 × 0.20 mm
Z = 12
Data collection top
Enraf–Nonius CAD-4
diffractometer
4777 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.066
Graphite monochromatorθmax = 26.0°, θmin = 1.4°
ω/2θ scansh = 3434
Absorption correction: ψ scan
(North et al., 1968)
k = 011
Tmin = 0.918, Tmax = 0.958l = 022
10466 measured reflections3 standard reflections every 120 min
10124 independent reflections intensity decay: none
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.079H-atom parameters constrained
wR(F2) = 0.206 w = 1/[σ2(Fo2) + (0.080P)2]
where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
10124 reflectionsΔρmax = 0.42 e Å3
637 parametersΔρmin = 0.58 e Å3
Primary atom site location: structure-invariant direct methods
Crystal data top
C16H17FN2O4SV = 5200.7 (18) Å3
Mr = 352.39Z = 12
Monoclinic, P21/cMo Kα radiation
a = 28.875 (6) ŵ = 0.22 mm1
b = 9.887 (2) ÅT = 294 K
c = 18.400 (4) Å0.40 × 0.20 × 0.20 mm
β = 98.09 (3)°
Data collection top
Enraf–Nonius CAD-4
diffractometer
4777 reflections with I > 2σ(I)
Absorption correction: ψ scan
(North et al., 1968)
Rint = 0.066
Tmin = 0.918, Tmax = 0.9583 standard reflections every 120 min
10466 measured reflections intensity decay: none
10124 independent reflections
Refinement top
R[F2 > 2σ(F2)] = 0.079637 parameters
wR(F2) = 0.206H-atom parameters constrained
S = 1.03Δρmax = 0.42 e Å3
10124 reflectionsΔρmin = 0.58 e Å3
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
S10.14585 (5)0.53855 (18)0.81769 (7)0.0619 (4)
O10.06944 (14)0.1784 (4)0.5211 (2)0.0781 (12)
O20.08271 (14)0.3803 (5)0.4713 (2)0.0777 (13)
O30.15061 (15)0.4344 (5)0.8708 (2)0.0881 (14)
O40.11470 (14)0.6475 (4)0.8258 (2)0.0848 (13)
N10.08452 (15)0.4164 (4)0.7203 (2)0.0531 (11)
N20.15938 (14)0.4561 (5)0.6845 (2)0.0538 (11)
F10.29201 (13)0.3184 (4)0.4561 (2)0.1078 (14)
C10.0211 (2)0.1644 (6)0.6804 (4)0.096 (2)
H1B0.04240.10620.65960.144*
H1C0.00970.12620.67220.144*
H1D0.03100.17350.73220.144*
C20.0138 (2)0.3993 (7)0.6734 (4)0.084 (2)
H2B0.01420.48420.64790.125*
H2C0.00430.41380.72490.125*
H2D0.04450.36020.66570.125*
C30.02057 (18)0.3038 (5)0.6440 (3)0.0578 (14)
H3B0.01050.29180.59130.069*
C40.06945 (16)0.3576 (5)0.6538 (3)0.0466 (12)
C50.09929 (17)0.3535 (5)0.6005 (3)0.0455 (12)
C60.14539 (18)0.3964 (5)0.6189 (3)0.0463 (12)
C70.12823 (17)0.4613 (5)0.7291 (3)0.0484 (13)
C80.0534 (2)0.1242 (8)0.4483 (4)0.109 (3)
H8A0.04550.03050.45230.164*
H8B0.07790.13300.41820.164*
H8C0.02640.17340.42650.164*
C90.08202 (18)0.3085 (6)0.5234 (3)0.0559 (14)
C100.20124 (19)0.6025 (7)0.8115 (3)0.0742 (18)
H10A0.21330.64660.85670.111*
H10B0.19930.66640.77190.111*
H10C0.22170.52970.80250.111*
C110.18219 (17)0.3796 (5)0.5712 (3)0.0474 (13)
C120.18688 (19)0.2589 (6)0.5343 (3)0.0569 (14)
H12A0.16520.19010.53650.068*
C130.22339 (19)0.2399 (6)0.4946 (3)0.0616 (15)
H13A0.22630.15980.46910.074*
C140.2548 (2)0.3406 (7)0.4936 (3)0.0682 (17)
C150.2519 (2)0.4624 (7)0.5281 (3)0.0737 (18)
H15A0.27360.53060.52450.088*
C160.21536 (19)0.4801 (6)0.5686 (3)0.0577 (14)
H16A0.21310.56020.59430.069*
S20.30615 (5)0.60184 (15)0.02405 (7)0.0538 (4)
O50.14659 (15)0.3704 (4)0.2138 (2)0.0810 (13)
O60.18226 (13)0.5146 (4)0.29765 (19)0.0654 (11)
O70.28275 (14)0.5614 (5)0.04534 (19)0.0805 (13)
O80.32002 (14)0.7407 (4)0.0338 (2)0.0748 (12)
N30.28601 (14)0.4816 (4)0.1474 (2)0.0481 (10)
N40.22682 (15)0.6175 (4)0.0759 (2)0.0514 (11)
F20.02822 (11)0.8653 (4)0.0472 (2)0.0861 (11)
C170.3160 (2)0.4249 (7)0.3020 (4)0.088
H17A0.30740.51040.32100.132*
H17B0.34000.43830.27160.132*
H17C0.32740.36600.34200.132*
C180.2865 (2)0.2228 (6)0.2288 (4)0.086
H18A0.25890.18280.20200.128*
H18B0.29820.16560.26940.128*
H18C0.30990.23290.19700.128*
C190.27420 (19)0.3627 (6)0.2577 (3)0.0592 (15)
H19A0.24980.35120.28920.071*
C200.25592 (17)0.4539 (5)0.1949 (3)0.0474 (12)
C210.20956 (17)0.5053 (5)0.1837 (3)0.0440 (12)
C220.19646 (17)0.5897 (5)0.1238 (3)0.0446 (12)
C230.26833 (18)0.5614 (5)0.0913 (3)0.0515 (13)
C240.1506 (2)0.4707 (7)0.3498 (3)0.094 (2)
H24A0.15810.51910.39520.141*
H24B0.15440.37540.35880.141*
H24C0.11880.48910.32930.141*
C250.1753 (2)0.4533 (6)0.2322 (3)0.0517 (13)
C260.3550 (2)0.4989 (7)0.0467 (4)0.088 (2)
H26A0.37680.51480.01280.132*
H26B0.34550.40570.04400.132*
H26C0.36950.51940.09560.132*
C270.15002 (17)0.6563 (5)0.1054 (3)0.0460 (12)
C280.12203 (18)0.6904 (5)0.1578 (3)0.0545 (14)
H28A0.13130.66760.20670.065*
C290.08071 (19)0.7578 (6)0.1378 (3)0.0629 (16)
H29A0.06140.77810.17270.075*
C300.06822 (19)0.7948 (6)0.0661 (3)0.0653 (16)
C310.0941 (2)0.7609 (7)0.0118 (3)0.0755 (19)
H31A0.08420.78360.03700.091*
C320.13540 (19)0.6920 (6)0.0324 (3)0.0663 (16)
H32A0.15390.66870.00320.080*
S30.49545 (4)0.64141 (12)0.08480 (6)0.0412 (3)
O90.51612 (12)0.9595 (4)0.23235 (17)0.0565 (9)
O100.44927 (12)1.0270 (3)0.19608 (17)0.0496 (9)
O110.47036 (11)0.5155 (3)0.07353 (16)0.0494 (9)
O120.47873 (13)0.7416 (3)0.13142 (17)0.0572 (10)
N50.45677 (13)0.7060 (4)0.04859 (19)0.0377 (9)
N60.53247 (14)0.7946 (4)0.0098 (2)0.0429 (10)
F30.29254 (12)0.6619 (4)0.30536 (18)0.1047 (14)
C330.59905 (19)0.9978 (6)0.0043 (3)0.0654 (16)
H33A0.57711.04400.02140.098*
H33B0.62411.05800.01120.098*
H33C0.61140.92080.02380.098*
C340.60853 (18)0.8738 (5)0.1197 (3)0.0620 (15)
H34A0.59270.84620.16670.093*
H34B0.61980.79540.09190.093*
H34C0.63440.93130.12640.093*
C350.57467 (17)0.9510 (5)0.0785 (3)0.0437 (12)
H35A0.56481.03200.10730.052*
C360.53143 (15)0.8689 (4)0.0722 (2)0.0335 (10)
C370.49502 (16)0.7209 (4)0.0025 (2)0.0320 (10)
C380.45494 (16)0.7761 (4)0.1125 (2)0.0346 (10)
C390.49147 (16)0.8610 (4)0.1245 (2)0.0343 (10)
C400.4413 (2)1.1136 (5)0.2599 (3)0.0640 (16)
H40A0.41291.16370.25920.096*
H40B0.43871.05930.30360.096*
H40C0.46701.17530.25930.096*
C410.48822 (16)0.9515 (5)0.1902 (3)0.0397 (11)
C420.55448 (16)0.6089 (5)0.1152 (2)0.0459 (12)
H42A0.55760.56570.16230.069*
H42B0.57150.69260.11920.069*
H42C0.56680.55070.08080.069*
C430.41179 (16)0.7494 (4)0.1652 (2)0.0372 (11)
C440.37025 (18)0.7269 (5)0.1387 (3)0.0524 (13)
H44A0.36930.73190.08850.063*
C450.33026 (18)0.6972 (6)0.1854 (3)0.0682 (17)
H45A0.30220.68210.16740.082*
C460.3326 (2)0.6902 (6)0.2588 (3)0.0651 (16)
C470.3727 (2)0.7107 (6)0.2877 (3)0.0601 (15)
H47A0.37300.70490.33800.072*
C480.41319 (18)0.7402 (5)0.2408 (2)0.0467 (12)
H48A0.44110.75390.25940.056*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
S10.0506 (9)0.0947 (11)0.0395 (8)0.0079 (9)0.0030 (6)0.0031 (8)
O10.070 (3)0.091 (3)0.073 (3)0.008 (2)0.011 (2)0.030 (2)
O20.076 (3)0.106 (3)0.049 (2)0.006 (2)0.001 (2)0.003 (2)
O30.095 (3)0.112 (3)0.052 (2)0.013 (3)0.004 (2)0.020 (3)
O40.066 (3)0.111 (3)0.079 (3)0.016 (3)0.014 (2)0.035 (3)
N10.043 (3)0.073 (3)0.042 (2)0.002 (2)0.005 (2)0.002 (2)
N20.040 (2)0.075 (3)0.046 (3)0.002 (2)0.004 (2)0.000 (2)
F10.071 (3)0.155 (4)0.108 (3)0.005 (2)0.047 (2)0.024 (3)
C10.074 (5)0.082 (5)0.134 (7)0.021 (4)0.020 (4)0.014 (5)
C20.047 (4)0.109 (5)0.097 (5)0.007 (4)0.015 (3)0.023 (4)
C30.044 (3)0.072 (4)0.058 (3)0.001 (3)0.009 (3)0.005 (3)
C40.035 (3)0.056 (3)0.046 (3)0.005 (2)0.002 (2)0.003 (3)
C50.040 (3)0.055 (3)0.043 (3)0.004 (2)0.010 (2)0.000 (3)
C60.049 (3)0.044 (3)0.046 (3)0.005 (2)0.008 (2)0.004 (2)
C70.039 (3)0.061 (3)0.045 (3)0.000 (3)0.006 (2)0.002 (3)
C80.079 (5)0.137 (7)0.111 (6)0.019 (5)0.009 (4)0.071 (5)
C90.041 (3)0.063 (4)0.063 (4)0.003 (3)0.007 (3)0.013 (3)
C100.050 (4)0.112 (5)0.059 (4)0.014 (4)0.001 (3)0.008 (4)
C110.037 (3)0.058 (3)0.049 (3)0.004 (3)0.010 (2)0.003 (3)
C120.044 (3)0.066 (4)0.061 (4)0.004 (3)0.009 (3)0.005 (3)
C130.054 (4)0.068 (4)0.063 (4)0.013 (3)0.009 (3)0.008 (3)
C140.045 (3)0.102 (5)0.062 (4)0.008 (3)0.021 (3)0.006 (4)
C150.055 (4)0.096 (5)0.073 (4)0.026 (4)0.018 (3)0.006 (4)
C160.054 (4)0.062 (3)0.058 (4)0.006 (3)0.012 (3)0.003 (3)
S20.0423 (8)0.0774 (10)0.0432 (8)0.0012 (7)0.0115 (6)0.0141 (7)
O50.074 (3)0.084 (3)0.092 (3)0.028 (3)0.034 (2)0.005 (3)
O60.063 (3)0.089 (3)0.047 (2)0.007 (2)0.0173 (19)0.002 (2)
O70.066 (3)0.135 (4)0.042 (2)0.025 (3)0.0103 (19)0.003 (2)
O80.074 (3)0.073 (3)0.082 (3)0.016 (2)0.029 (2)0.013 (2)
N30.048 (3)0.056 (3)0.042 (2)0.001 (2)0.009 (2)0.014 (2)
N40.042 (3)0.070 (3)0.042 (2)0.000 (2)0.009 (2)0.011 (2)
F20.049 (2)0.103 (3)0.103 (3)0.0164 (19)0.0001 (18)0.012 (2)
C170.0880.0880.0880.0000.0120.000
C180.0860.0860.0860.0000.0120.000
C190.050 (3)0.074 (4)0.057 (3)0.005 (3)0.021 (3)0.010 (3)
C200.045 (3)0.056 (3)0.041 (3)0.004 (3)0.009 (2)0.006 (3)
C210.043 (3)0.055 (3)0.035 (3)0.008 (2)0.009 (2)0.000 (2)
C220.043 (3)0.049 (3)0.041 (3)0.003 (2)0.003 (2)0.001 (2)
C230.044 (3)0.072 (4)0.040 (3)0.007 (3)0.009 (2)0.002 (3)
C240.087 (5)0.145 (6)0.061 (4)0.019 (5)0.045 (4)0.030 (4)
C250.056 (4)0.053 (3)0.050 (3)0.005 (3)0.020 (3)0.008 (3)
C260.057 (4)0.119 (6)0.094 (5)0.026 (4)0.033 (4)0.032 (4)
C270.038 (3)0.055 (3)0.045 (3)0.007 (2)0.007 (2)0.001 (3)
C280.051 (3)0.064 (4)0.047 (3)0.003 (3)0.003 (3)0.000 (3)
C290.049 (4)0.075 (4)0.067 (4)0.011 (3)0.016 (3)0.003 (3)
C300.033 (3)0.083 (4)0.076 (4)0.013 (3)0.008 (3)0.008 (4)
C310.055 (4)0.113 (5)0.059 (4)0.022 (4)0.009 (3)0.025 (4)
C320.047 (3)0.099 (5)0.052 (4)0.012 (3)0.005 (3)0.002 (3)
S30.0468 (7)0.0510 (7)0.0270 (6)0.0044 (6)0.0087 (5)0.0025 (6)
O90.057 (2)0.079 (2)0.038 (2)0.002 (2)0.0198 (18)0.0074 (19)
O100.057 (2)0.054 (2)0.0382 (19)0.0029 (18)0.0064 (16)0.0090 (17)
O110.050 (2)0.060 (2)0.041 (2)0.0063 (17)0.0139 (16)0.0081 (17)
O120.076 (3)0.061 (2)0.0372 (19)0.015 (2)0.0180 (18)0.0050 (18)
N50.043 (2)0.040 (2)0.030 (2)0.0006 (18)0.0060 (17)0.0033 (17)
N60.053 (2)0.041 (2)0.035 (2)0.0003 (19)0.0030 (18)0.0041 (18)
F30.067 (2)0.172 (4)0.066 (2)0.050 (3)0.0211 (19)0.012 (2)
C330.056 (4)0.080 (4)0.061 (4)0.024 (3)0.010 (3)0.023 (3)
C340.054 (3)0.068 (4)0.069 (4)0.007 (3)0.026 (3)0.017 (3)
C350.050 (3)0.041 (3)0.041 (3)0.013 (2)0.007 (2)0.003 (2)
C360.039 (2)0.032 (2)0.032 (2)0.001 (2)0.0138 (19)0.002 (2)
C370.039 (3)0.022 (2)0.037 (2)0.0067 (19)0.011 (2)0.0030 (19)
C380.041 (3)0.035 (2)0.030 (2)0.003 (2)0.011 (2)0.002 (2)
C390.044 (3)0.031 (2)0.028 (2)0.006 (2)0.0080 (19)0.0020 (19)
C400.082 (4)0.060 (4)0.047 (3)0.001 (3)0.002 (3)0.017 (3)
C410.035 (3)0.044 (3)0.038 (3)0.003 (2)0.003 (2)0.004 (2)
C420.044 (3)0.060 (3)0.032 (3)0.001 (3)0.001 (2)0.010 (2)
C430.044 (3)0.036 (3)0.032 (2)0.003 (2)0.006 (2)0.004 (2)
C440.050 (3)0.073 (4)0.034 (3)0.008 (3)0.010 (2)0.005 (3)
C450.036 (3)0.119 (5)0.048 (3)0.019 (3)0.002 (3)0.011 (3)
C460.053 (4)0.087 (4)0.051 (4)0.022 (3)0.006 (3)0.006 (3)
C470.070 (4)0.074 (4)0.033 (3)0.008 (3)0.001 (3)0.000 (3)
C480.049 (3)0.059 (3)0.033 (3)0.003 (3)0.009 (2)0.001 (2)
Geometric parameters (Å, º) top
S1—O31.412 (4)C19—H19A0.9800
S1—O41.425 (4)C20—C211.420 (7)
S1—C71.807 (5)C21—C221.391 (6)
S1—C101.738 (6)C21—C251.513 (7)
O1—C81.456 (7)C22—C271.490 (6)
O1—C91.335 (6)C24—H24A0.9600
O2—C91.195 (6)C24—H24B0.9600
N1—C41.369 (6)C24—H24C0.9600
N1—C71.326 (6)C26—H26A0.9600
N2—C61.353 (6)C26—H26B0.9600
N2—C71.301 (6)C26—H26C0.9600
F1—C141.374 (6)C27—C281.384 (6)
C1—C31.530 (8)C27—C321.395 (7)
C1—H1B0.9600C28—C291.371 (7)
C1—H1C0.9600C28—H28A0.9300
C1—H1D0.9600C29—C301.367 (7)
C2—C31.523 (7)C29—H29A0.9300
C2—H2B0.9600C30—C311.371 (8)
C2—H2C0.9600C31—C321.380 (7)
C2—H2D0.9600C31—H31A0.9300
C3—C41.495 (7)C32—H32A0.9300
C3—H3B0.9800S3—O111.440 (3)
C4—C51.395 (6)S3—O121.438 (3)
C5—C61.393 (6)S3—C371.786 (4)
C5—C91.503 (7)S3—C421.747 (5)
C6—C111.480 (6)O9—C411.198 (5)
C8—H8A0.9600O10—C401.446 (5)
C8—H8B0.9600O10—C411.341 (5)
C8—H8C0.9600N5—C371.303 (5)
C10—H10A0.9600N5—C381.360 (5)
C10—H10B0.9600N6—C361.360 (5)
C10—H10C0.9600N6—C371.326 (5)
C11—C121.388 (7)F3—C461.369 (6)
C11—C161.386 (7)C33—C351.517 (6)
C12—C131.378 (7)C33—H33A0.9600
C12—H12A0.9300C33—H33B0.9600
C13—C141.349 (8)C33—H33C0.9600
C13—H13A0.9300C34—C351.523 (6)
C14—C151.369 (8)C34—H34A0.9600
C15—C161.385 (7)C34—H34B0.9600
C15—H15A0.9300C34—H34C0.9600
C16—H16A0.9300C35—C361.508 (6)
S2—O71.416 (4)C35—H35A0.9800
S2—O81.435 (4)C36—C391.397 (6)
S2—C231.807 (5)C38—C391.390 (6)
S2—C261.742 (6)C38—C431.491 (6)
O5—C251.180 (6)C39—C411.496 (6)
O6—C241.481 (6)C40—H40A0.9600
O6—C251.338 (6)C40—H40B0.9600
N3—C201.346 (6)C40—H40C0.9600
N3—C231.341 (6)C42—H42A0.9600
N4—C221.356 (6)C42—H42B0.9600
N4—C231.315 (6)C42—H42C0.9600
F2—C301.352 (6)C43—C441.375 (6)
C17—C191.490 (8)C43—C481.401 (6)
C17—H17A0.9600C44—C451.370 (7)
C17—H17B0.9600C44—H44A0.9300
C17—H17C0.9600C45—C461.363 (7)
C18—C191.541 (8)C45—H45A0.9300
C18—H18A0.9600C46—C471.355 (7)
C18—H18B0.9600C47—C481.382 (7)
C18—H18C0.9600C47—H47A0.9300
C19—C201.501 (7)C48—H48A0.9300
O3—S1—O4118.7 (3)N4—C23—N3130.6 (4)
O3—S1—C7107.6 (3)N4—C23—S2112.3 (4)
O3—S1—C10108.0 (3)N3—C23—S2117.1 (4)
O4—S1—C7108.2 (2)O6—C24—H24A109.5
O4—S1—C10109.4 (3)O6—C24—H24B109.5
C10—S1—C7103.9 (3)H24A—C24—H24B109.5
C9—O1—C8115.7 (5)O6—C24—H24C109.5
C7—N1—C4115.4 (4)H24A—C24—H24C109.5
C7—N2—C6115.7 (4)H24B—C24—H24C109.5
C3—C1—H1B109.5O5—C25—O6125.7 (5)
C3—C1—H1C109.5O5—C25—C21124.0 (5)
H1B—C1—H1C109.5O6—C25—C21110.4 (5)
C3—C1—H1D109.5S2—C26—H26A109.5
H1B—C1—H1D109.5S2—C26—H26B109.5
H1C—C1—H1D109.5H26A—C26—H26B109.5
C3—C2—H2B109.5S2—C26—H26C109.5
C3—C2—H2C109.5H26A—C26—H26C109.5
H2B—C2—H2C109.5H26B—C26—H26C109.5
C3—C2—H2D109.5C28—C27—C32118.8 (5)
H2B—C2—H2D109.5C28—C27—C22123.0 (5)
H2C—C2—H2D109.5C32—C27—C22118.1 (4)
C4—C3—C2112.8 (5)C29—C28—C27120.2 (5)
C4—C3—C1108.4 (5)C29—C28—H28A119.9
C2—C3—C1111.8 (5)C27—C28—H28A119.9
C4—C3—H3B107.9C30—C29—C28119.3 (5)
C2—C3—H3B107.9C30—C29—H29A120.3
C1—C3—H3B107.9C28—C29—H29A120.3
N1—C4—C5119.4 (4)F2—C30—C29119.1 (5)
N1—C4—C3115.8 (4)F2—C30—C31118.1 (5)
C5—C4—C3124.8 (5)C29—C30—C31122.8 (5)
C6—C5—C4118.9 (5)C30—C31—C32117.3 (6)
C6—C5—C9119.9 (4)C30—C31—H31A121.3
C4—C5—C9121.1 (5)C32—C31—H31A121.3
N2—C6—C5120.4 (4)C31—C32—C27121.5 (5)
N2—C6—C11115.4 (4)C31—C32—H32A119.3
C5—C6—C11124.2 (5)C27—C32—H32A119.3
N2—C7—N1129.8 (5)O11—S3—C37108.1 (2)
N2—C7—S1117.0 (4)O11—S3—C42109.6 (2)
N1—C7—S1113.2 (4)O12—S3—O11118.5 (2)
O1—C8—H8A109.5O12—S3—C37105.83 (19)
O1—C8—H8B109.5O12—S3—C42109.3 (2)
H8A—C8—H8B109.5C42—S3—C37104.6 (2)
O1—C8—H8C109.5C41—O10—C40115.5 (4)
H8A—C8—H8C109.5C37—N5—C38115.6 (4)
H8B—C8—H8C109.5C37—N6—C36117.4 (4)
O2—C9—O1125.6 (6)C35—C33—H33A109.5
O2—C9—C5122.7 (5)C35—C33—H33B109.5
O1—C9—C5111.6 (5)H33A—C33—H33B109.5
S1—C10—H10A109.5C35—C33—H33C109.5
S1—C10—H10B109.5H33A—C33—H33C109.5
H10A—C10—H10B109.5H33B—C33—H33C109.5
S1—C10—H10C109.5C35—C34—H34A109.5
H10A—C10—H10C109.5C35—C34—H34B109.5
H10B—C10—H10C109.5H34A—C34—H34B109.5
C16—C11—C12118.9 (5)C35—C34—H34C109.5
C16—C11—C6119.8 (5)H34A—C34—H34C109.5
C12—C11—C6120.9 (5)H34B—C34—H34C109.5
C13—C12—C11120.7 (5)C36—C35—C33112.3 (4)
C13—C12—H12A119.6C36—C35—C34111.4 (4)
C11—C12—H12A119.6C33—C35—C34110.6 (4)
C14—C13—C12118.2 (5)C36—C35—H35A107.4
C14—C13—H13A120.9C33—C35—H35A107.4
C12—C13—H13A120.9C34—C35—H35A107.4
C13—C14—C15123.9 (5)N6—C36—C39118.0 (4)
C13—C14—F1117.6 (6)N6—C36—C35115.9 (4)
C15—C14—F1118.5 (6)C39—C36—C35126.1 (4)
C14—C15—C16117.5 (5)N5—C37—N6128.6 (4)
C14—C15—H15A121.3N5—C37—S3115.7 (3)
C16—C15—H15A121.3N6—C37—S3115.5 (3)
C15—C16—C11120.7 (5)N5—C38—C39120.5 (4)
C15—C16—H16A119.7N5—C38—C43113.5 (4)
C11—C16—H16A119.7C39—C38—C43126.0 (4)
O7—S2—O8118.2 (3)C38—C39—C36119.7 (4)
O7—S2—C23107.3 (2)C38—C39—C41121.8 (4)
O7—S2—C26108.5 (3)C36—C39—C41118.4 (4)
O8—S2—C23108.1 (2)O10—C40—H40A109.5
O8—S2—C26109.1 (3)O10—C40—H40B109.5
C26—S2—C23104.7 (3)H40A—C40—H40B109.5
C25—O6—C24114.9 (5)O10—C40—H40C109.5
C23—N3—C20114.2 (4)H40A—C40—H40C109.5
C23—N4—C22115.3 (4)H40B—C40—H40C109.5
C19—C17—H17A109.5O9—C41—O10122.9 (4)
C19—C17—H17B109.5O9—C41—C39126.2 (4)
H17A—C17—H17B109.5O10—C41—C39110.8 (4)
C19—C17—H17C109.5S3—C42—H42A109.5
H17A—C17—H17C109.5S3—C42—H42B109.5
H17B—C17—H17C109.5H42A—C42—H42B109.5
C19—C18—H18A109.5S3—C42—H42C109.5
C19—C18—H18B109.5H42A—C42—H42C109.5
H18A—C18—H18B109.5H42B—C42—H42C109.5
C19—C18—H18C109.5C44—C43—C48119.4 (4)
H18A—C18—H18C109.5C44—C43—C38119.3 (4)
H18B—C18—H18C109.5C48—C43—C38121.3 (4)
C17—C19—C20110.0 (5)C45—C44—C43120.9 (5)
C17—C19—C18110.6 (5)C45—C44—H44A119.6
C20—C19—C18110.3 (5)C43—C44—H44A119.6
C17—C19—H19A108.6C46—C45—C44118.4 (5)
C20—C19—H19A108.6C46—C45—H45A120.8
C18—C19—H19A108.6C44—C45—H45A120.8
N3—C20—C21121.0 (4)C47—C46—C45123.1 (5)
N3—C20—C19115.7 (4)C47—C46—F3118.6 (5)
C21—C20—C19123.3 (4)C45—C46—F3118.4 (5)
C22—C21—C20118.4 (4)C46—C47—C48118.8 (5)
C22—C21—C25122.9 (5)C46—C47—H47A120.6
C20—C21—C25118.3 (4)C48—C47—H47A120.6
N4—C22—C21120.5 (5)C47—C48—C43119.5 (5)
N4—C22—C27113.9 (4)C47—C48—H48A120.2
C21—C22—C27125.6 (4)C43—C48—H48A120.2
O3—S1—C7—N171.3 (4)C19—C20—C21—C257.2 (7)
O3—S1—C7—N2107.9 (4)C20—C21—C22—N42.5 (7)
O4—S1—C7—N158.1 (5)C25—C21—C22—N4170.3 (5)
O4—S1—C7—N2122.7 (4)C20—C21—C22—C27177.7 (5)
C10—S1—C7—N1174.3 (4)C25—C21—C22—C279.5 (8)
C10—S1—C7—N26.5 (5)C22—C21—C25—O572.0 (7)
C8—O1—C9—O22.9 (8)C20—C21—C25—O5100.8 (7)
C8—O1—C9—C5178.3 (5)C22—C21—C25—O6107.9 (5)
C7—N1—C4—C52.5 (7)C20—C21—C25—O679.3 (6)
C7—N1—C4—C3178.7 (5)N4—C22—C27—C28152.0 (5)
C4—N1—C7—N21.2 (8)C21—C22—C27—C2828.2 (8)
C4—N1—C7—S1179.7 (3)N4—C22—C27—C3224.6 (7)
C7—N2—C6—C54.4 (7)C21—C22—C27—C32155.2 (5)
C7—N2—C6—C11174.7 (4)C32—C27—C28—C290.1 (8)
C6—N2—C7—N10.3 (8)C22—C27—C28—C29176.7 (5)
C6—N2—C7—S1179.3 (4)C27—C28—C29—C302.2 (9)
C2—C3—C4—N142.9 (7)C28—C29—C30—F2177.7 (5)
C1—C3—C4—N181.4 (6)C28—C29—C30—C313.7 (10)
C2—C3—C4—C5135.9 (6)F2—C30—C31—C32178.4 (5)
C1—C3—C4—C599.8 (6)C29—C30—C31—C323.0 (10)
N1—C4—C5—C66.8 (7)C30—C31—C32—C270.8 (10)
C3—C4—C5—C6174.4 (5)C28—C27—C32—C310.5 (9)
N1—C4—C5—C9171.1 (5)C22—C27—C32—C31176.2 (5)
C3—C4—C5—C97.7 (8)O11—S3—C37—N536.4 (4)
C4—C5—C6—N27.9 (7)O11—S3—C37—N6147.9 (3)
C9—C5—C6—N2170.0 (5)O12—S3—C37—N591.5 (4)
C4—C5—C6—C11171.1 (5)O12—S3—C37—N684.2 (4)
C9—C5—C6—C1111.0 (8)C42—S3—C37—N5153.1 (3)
C6—C5—C9—O258.8 (7)C42—S3—C37—N631.2 (4)
C4—C5—C9—O2119.1 (6)C40—O10—C41—O93.8 (7)
C6—C5—C9—O1116.8 (5)C40—O10—C41—C39177.0 (4)
C4—C5—C9—O165.3 (6)C38—N5—C37—S3174.5 (3)
N2—C6—C11—C1638.1 (7)C38—N5—C37—N60.5 (7)
C5—C6—C11—C16142.9 (5)C37—N5—C38—C392.3 (6)
N2—C6—C11—C12135.4 (5)C37—N5—C38—C43176.5 (4)
C5—C6—C11—C1243.6 (7)C37—N6—C36—C390.9 (6)
C16—C11—C12—C131.3 (8)C37—N6—C36—C35179.9 (4)
C6—C11—C12—C13174.9 (5)C36—N6—C37—S3172.9 (3)
C11—C12—C13—C141.3 (8)C36—N6—C37—N52.1 (7)
C12—C13—C14—C152.0 (9)C33—C35—C36—N631.2 (6)
C12—C13—C14—F1177.6 (5)C34—C35—C36—N693.5 (5)
C13—C14—C15—C162.7 (10)C33—C35—C36—C39150.0 (5)
F1—C14—C15—C16176.9 (5)C34—C35—C36—C3985.4 (6)
C14—C15—C16—C112.6 (9)N6—C36—C39—C381.6 (6)
C12—C11—C16—C152.0 (8)C35—C36—C39—C38177.2 (4)
C6—C11—C16—C15175.6 (5)N6—C36—C39—C41174.6 (4)
O7—S2—C23—N3123.8 (4)C35—C36—C39—C416.6 (6)
O7—S2—C23—N456.0 (5)N5—C38—C39—C363.3 (6)
O8—S2—C23—N3107.6 (4)C43—C38—C39—C36175.4 (4)
O8—S2—C23—N472.5 (4)N5—C38—C39—C41172.8 (4)
C26—S2—C23—N38.6 (5)C43—C38—C39—C418.5 (7)
C26—S2—C23—N4171.3 (4)C38—C39—C41—O9128.5 (5)
C24—O6—C25—O50.4 (8)C36—C39—C41—O955.4 (6)
C24—O6—C25—C21179.7 (4)C38—C39—C41—O1052.3 (5)
C23—N3—C20—C19178.9 (4)C36—C39—C41—O10123.8 (4)
C23—N3—C20—C210.9 (7)N5—C38—C43—C4435.1 (6)
C20—N3—C23—S2179.1 (4)C39—C38—C43—C44146.2 (5)
C20—N3—C23—N40.7 (8)N5—C38—C43—C48141.8 (4)
C23—N4—C22—C211.1 (7)C39—C38—C43—C4837.0 (7)
C23—N4—C22—C27179.1 (4)C48—C43—C44—C450.7 (8)
C22—N4—C23—S2179.2 (3)C38—C43—C44—C45177.6 (5)
C22—N4—C23—N30.7 (8)C44—C43—C48—C470.9 (7)
C17—C19—C20—N359.9 (6)C38—C43—C48—C47177.8 (4)
C18—C19—C20—N362.3 (6)C43—C44—C45—C460.1 (9)
C17—C19—C20—C21122.1 (5)C44—C45—C46—C470.4 (10)
C18—C19—C20—C21115.6 (6)C44—C45—C46—F3179.3 (5)
N3—C20—C21—C222.5 (7)C45—C46—C47—C480.1 (9)
C19—C20—C21—C22179.7 (5)F3—C46—C47—C48179.6 (5)
N3—C20—C21—C25170.7 (5)C46—C47—C48—C430.5 (8)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C3—H3B···O10.982.543.089 (7)115
C17—H17C···F10.962.513.191 (8)128
C19—H19A···O60.982.553.224 (7)126
C28—H28A···O60.932.563.378 (6)147
C8—H8B···O3i0.962.483.373 (6)155
C35—H35A···O12ii0.982.573.484 (6)154
C42—H42A···O9iii0.962.433.229 (6)141
C48—H48A···O12iv0.932.423.224 (6)146
Symmetry codes: (i) x, y+1/2, z1/2; (ii) x+1, y+2, z; (iii) x, y+3/2, z+1/2; (iv) x, y+3/2, z1/2.

Experimental details

Crystal data
Chemical formulaC16H17FN2O4S
Mr352.39
Crystal system, space groupMonoclinic, P21/c
Temperature (K)294
a, b, c (Å)28.875 (6), 9.887 (2), 18.400 (4)
β (°) 98.09 (3)
V3)5200.7 (18)
Z12
Radiation typeMo Kα
µ (mm1)0.22
Crystal size (mm)0.40 × 0.20 × 0.20
Data collection
DiffractometerEnraf–Nonius CAD-4
diffractometer
Absorption correctionψ scan
(North et al., 1968)
Tmin, Tmax0.918, 0.958
No. of measured, independent and
observed [I > 2σ(I)] reflections
10466, 10124, 4777
Rint0.066
(sin θ/λ)max1)0.617
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.079, 0.206, 1.03
No. of reflections10124
No. of parameters637
No. of restraints?
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å3)0.42, 0.58

Computer programs: CAD-4 Software (Enraf–Nonius, 1989), XCAD4 (Harms & Wocadlo, 1995), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2003), SHELXTL (Sheldrick, 2008).

Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
C3—H3B···O10.982.543.089 (7)115.00
C17—H17C···F10.962.513.191 (8)128.00
C19—H19A···O60.982.553.224 (7)126.00
C28—H28A···O60.932.563.378 (6)147.00
C8—H8B···O3i0.962.483.373 (6)155.00
C35—H35A···O12ii0.982.573.484 (6)154.00
C42—H42A···O9iii0.962.433.229 (6)141.00
C48—H48A···O12iv0.932.423.224 (6)146.00
Symmetry codes: (i) x, y+1/2, z1/2; (ii) x+1, y+2, z; (iii) x, y+3/2, z+1/2; (iv) x, y+3/2, z1/2.
 

References

First citationAllen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19.  CrossRef Web of Science Google Scholar
First citationEnraf–Nonius (1989). CAD-4 Software. Enraf–Nonius, Delft, The Netherlands.  Google Scholar
First citationGompper, R., Mair, H.-J. & Polborn, K. (1997). Synthesis, p. 696.  CSD CrossRef Google Scholar
First citationHarms, K. & Wocadlo, S. (1995). XCAD4. University of Marburg, Germany.  Google Scholar
First citationLaufer, S. A. & Wagner, G. K. (2002). J. Med. Chem. 45, 2733–2740.  Web of Science CrossRef PubMed CAS Google Scholar
First citationNorth, A. C. T., Phillips, D. C. & Mathews, F. S. (1968). Acta Cryst. A24, 351–359.  CrossRef IUCr Journals Web of Science Google Scholar
First citationSheldrick, G. M. (2008). Acta Cryst. A64, 112–122.  Web of Science CrossRef CAS IUCr Journals Google Scholar
First citationSpek, A. L. (2003). J. Appl. Cryst. 36, 7–13.  Web of Science CrossRef CAS IUCr Journals Google Scholar

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