organic compounds\(\def\hfill{\hskip 5em}\def\hfil{\hskip 3em}\def\eqno#1{\hfil {#1}}\)

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COMMUNICATIONS
ISSN: 2056-9890

2-Meth­oxy­phenyl 2-{2-[1-methyl-5-(4-methyl­benzo­yl)pyrrol-2-yl]acetamido}acetate

aDepartment of Chemistry and Chemical Engineering, Minjiang University, Fuzhou 350108, People's Republic of China
*Correspondence e-mail: loubenyong@yahoo.com.cn

(Received 30 April 2008; accepted 4 July 2008; online 9 July 2008)

The title compound, amtolmetin guacil, C24H24N2O5, is a new gastroprotective non-steroidal anti-inflammatory drug. In the crystal structure, the drug mol­ecule is linked into a one-dimensional structure along the c axis by weak N—H⋯O inter­actions between the amide groups. C—H⋯O and C—H⋯π inter­actions influence the packing.

Related literature

For background, see: Tubaro et al. (2000[Tubaro, E., Belogi, L. & Mezzadri, C. M. (2000). Eur. J. Pharmacol. 387, 233-244.]); Vippagunta et al. (2001[Vippagunta, S. R., Brittain, H. G. & Grant, D. J. W. (2001). Adv. Drug Deliv. Rev. 48, 3-26.]).

[Scheme 1]

Experimental

Crystal data
  • C24H24N2O5

  • Mr = 420.45

  • Orthorhombic, P n a 21

  • a = 11.307 (3) Å

  • b = 19.768 (7) Å

  • c = 9.713 (3) Å

  • V = 2170.9 (12) Å3

  • Z = 4

  • Mo Kα radiation

  • μ = 0.09 mm−1

  • T = 293 (2) K

  • 0.30 × 0.25 × 0.20 mm

Data collection
  • Rigaku Weissenberg IP diffractometer

  • Absorption correction: none

  • 19812 measured reflections

  • 2626 independent reflections

  • 1938 reflections with I > 2σ(I)

  • Rint = 0.085

Refinement
  • R[F2 > 2σ(F2)] = 0.068

  • wR(F2) = 0.109

  • S = 1.12

  • 2626 reflections

  • 284 parameters

  • 1 restraint

  • H-atom parameters constrained

  • Δρmax = 0.13 e Å−3

  • Δρmin = −0.17 e Å−3

Table 1
Hydrogen-bonding geometry (Å, °)

Cg1 is the centroid of the C2/C3–C7 ring.

D—H⋯A D—H H⋯A DA D—H⋯A
N1—H1⋯O4i 0.88 2.32 3.1564 157
C11—H11B⋯O4i 0.99 2.40 3.2586 145
C24—H24A⋯O3ii 0.98 2.50 3.4418 162
C14—H14⋯ O1iii 0.95 2.43 3.3722 170
C19—H19⋯ O3iii 0.95 2.56 3.2300 127
C13—H13⋯ Cg1iv 0.95 2.85 3.6961 150
Symmetry codes: (i) [1-x,1-y,{1\over 2}+z]; (ii) [{1\over 2}-x,y-{1\over 2},z-{1\over 2}]; (iii) [1-x,1-y,z-{1\over 2}]; (iv) x-1,y, z.

Data collection: TEXRAY (Molecular Structure Corporation, 1999[Molecular Structure Corporation (1999). TEXRAY and TEXSAN. MSC, The Woodlands, Texas, USA.]); cell refinement: TEXRAY; data reduction: TEXSAN (Molecular Structure Corporation, 1999[Molecular Structure Corporation (1999). TEXRAY and TEXSAN. MSC, The Woodlands, Texas, USA.]); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008[Sheldrick, G. M. (2008). Acta Cryst. A64, 112-122.]); molecular graphics: X-SEED (Barbour, 2001[Barbour, L. J. (2001). J. Supramol. Chem. 1, 189-191.]); software used to prepare material for publication: SHELXL97.

Supporting information


Comment top

A current focus of research in solid state drug design is to understand polymorphism at the molecular level (Vippagunta et al., 2001). Amtolmetin guacil is a new gastroprotective nonsteroidal anti-inflammatory drug (Tubaro et al., 2000). In this contribution, we report its crystal structure which is unknown till now.

In the crystal structure, there exist weak hydrogen bonding interactions (N1—H1···O4) between the amide group of amtolmetin guacil which connect drug molecules into a one-dimensional structure along c axis. There also exist weak C—H···O interactions within the one-dimensional structure (C11—H11B···O4; C14—H14···O1; C19—H19··· O3; Table 1). The C—H···O interactions and C—H···π interactions (C24—H24A···O3; C13—H13···Cg1; Table 1) give rise to the packing structure (Fig.2)

Related literature top

For background, see: Tubaro et al. (2000); Vippagunta et al. (2001)

Experimental top

Amtolmetin guacil (105 mg, 0.25 mmol) was dissolved in ethanol (20 ml) and the solution was kept in air and after several days colorless crystals were obtained.

Refinement top

All H atoms were located geometrically (C—H = 0.95–0.99 Å, N—H = 0.88 Å) with Uiso(H) = 1.2 Ueq(C,N) or 1.5 Ueq(C).

Computing details top

Data collection: TEXRAY (Molecular Structure Corporation, 1999); cell refinement: TEXRAY (Molecular Structure Corporation, 1999); data reduction: TEXSAN (Molecular Structure Corporation, 1999); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).

Figures top
[Figure 1] Fig. 1. ORTEP of (I) with 50% thermal ellipsoids.
[Figure 2] Fig. 2. The packing structure viewed along c axis. The dashed lines indicate C—H···O or C—H···π interactions
2-Methoxyphenyl 2-{2-[1-methyl-5-(4-methylbenzoyl)pyrrol-2-yl]acetamido}acetate top
Crystal data top
C24H24N2O5F(000) = 888
Mr = 420.45Dx = 1.286 Mg m3
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P2c-2nCell parameters from 19812 reflections
a = 11.307 (3) Åθ = 3.5–27.5°
b = 19.768 (7) ŵ = 0.09 mm1
c = 9.713 (3) ÅT = 293 K
V = 2170.9 (12) Å3Block, colorless
Z = 40.30 × 0.25 × 0.20 mm
Data collection top
Rigaku Weissenberg IP
diffractometer
1938 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.085
Graphite monochromatorθmax = 27.5°, θmin = 3.5°
scintillation counter scansh = 1414
19812 measured reflectionsk = 2525
2626 independent reflectionsl = 1212
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.068H-atom parameters constrained
wR(F2) = 0.109 w = 1/[σ2(Fo2) + (0.0337P)2 + 0.5426P]
where P = (Fo2 + 2Fc2)/3
S = 1.12(Δ/σ)max < 0.001
2626 reflectionsΔρmax = 0.13 e Å3
284 parametersΔρmin = 0.17 e Å3
1 restraintExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0111 (12)
Crystal data top
C24H24N2O5V = 2170.9 (12) Å3
Mr = 420.45Z = 4
Orthorhombic, Pna21Mo Kα radiation
a = 11.307 (3) ŵ = 0.09 mm1
b = 19.768 (7) ÅT = 293 K
c = 9.713 (3) Å0.30 × 0.25 × 0.20 mm
Data collection top
Rigaku Weissenberg IP
diffractometer
1938 reflections with I > 2σ(I)
19812 measured reflectionsRint = 0.085
2626 independent reflections
Refinement top
R[F2 > 2σ(F2)] = 0.0681 restraint
wR(F2) = 0.109H-atom parameters constrained
S = 1.12Δρmax = 0.13 e Å3
2626 reflectionsΔρmin = 0.17 e Å3
284 parameters
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O10.0274 (2)0.40855 (14)0.2773 (3)0.0591 (8)
O20.1174 (2)0.48242 (13)0.4332 (4)0.0637 (8)
O30.2659 (2)0.40913 (14)0.4028 (4)0.0647 (9)
O40.4775 (2)0.51742 (15)0.4870 (3)0.0595 (8)
O50.7830 (4)0.75559 (16)0.3571 (4)0.0995 (13)
N10.4020 (2)0.51066 (16)0.2744 (3)0.0481 (8)
H10.41470.50280.18640.058*
N20.6986 (2)0.61548 (15)0.3541 (3)0.0438 (7)
C10.1080 (4)0.3716 (3)0.1921 (5)0.0747 (14)
H1A0.08880.32330.19600.112*
H1B0.10160.38760.09690.112*
H1C0.18900.37870.22520.112*
C20.0308 (3)0.39568 (19)0.4136 (5)0.0469 (9)
C30.1055 (3)0.35013 (19)0.4785 (5)0.0547 (11)
H30.15900.32390.42510.066*
C40.1032 (4)0.3424 (2)0.6190 (5)0.0676 (13)
H40.15520.31110.66200.081*
C50.0266 (4)0.3793 (3)0.6973 (5)0.0721 (13)
H50.02540.37350.79440.086*
C60.0490 (4)0.4250 (2)0.6363 (5)0.0678 (13)
H60.10210.45090.69070.081*
C70.0467 (3)0.43263 (19)0.4957 (5)0.0505 (10)
C80.2255 (3)0.4638 (2)0.3893 (4)0.0464 (9)
C90.2833 (3)0.5239 (2)0.3221 (4)0.0538 (10)
H9A0.23440.53850.24290.065*
H9B0.28560.56180.38880.065*
C100.4926 (3)0.51018 (18)0.3624 (4)0.0448 (9)
C110.6148 (3)0.5008 (2)0.3026 (4)0.0478 (10)
H11A0.64070.45330.31530.057*
H11B0.61350.51060.20270.057*
C120.6995 (3)0.54758 (17)0.3735 (4)0.0402 (8)
C130.7776 (3)0.53269 (19)0.4760 (4)0.0456 (9)
H130.79760.48880.50840.055*
C140.8228 (3)0.59397 (19)0.5247 (4)0.0486 (10)
H140.87790.59930.59780.058*
C150.7734 (3)0.64510 (18)0.4483 (4)0.0458 (9)
C160.6281 (4)0.6504 (2)0.2510 (4)0.0677 (13)
H16A0.67370.65440.16560.102*
H16B0.60740.69560.28470.102*
H16C0.55560.62460.23320.102*
C170.7972 (4)0.7178 (2)0.4555 (4)0.0581 (11)
C180.8422 (3)0.74440 (19)0.5879 (4)0.0483 (9)
C190.8074 (3)0.71810 (18)0.7124 (4)0.0482 (10)
H190.75390.68110.71450.058*
C200.8493 (3)0.74480 (19)0.8353 (4)0.0512 (10)
H200.82440.72580.92040.061*
C210.9197 (4)0.79965 (19)0.5888 (5)0.0576 (11)
H210.94350.81950.50420.069*
C220.9615 (3)0.8255 (2)0.7100 (5)0.0580 (11)
H221.01520.86240.70800.070*
C230.9273 (3)0.79901 (19)0.8349 (5)0.0529 (10)
C240.9719 (5)0.8269 (2)0.9692 (5)0.0820 (16)
H24A1.05460.84080.95880.123*
H24B0.96620.79201.04060.123*
H24C0.92400.86610.99580.123*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O10.0588 (17)0.0615 (18)0.0569 (18)0.0087 (14)0.0102 (15)0.0022 (15)
O20.0390 (13)0.0507 (15)0.101 (2)0.0013 (12)0.0066 (16)0.0015 (17)
O30.0476 (15)0.0512 (17)0.096 (2)0.0026 (13)0.0111 (16)0.0020 (16)
O40.0488 (15)0.091 (2)0.0383 (16)0.0072 (15)0.0047 (13)0.0114 (16)
O50.164 (3)0.065 (2)0.069 (2)0.033 (2)0.042 (3)0.0247 (19)
N10.0393 (17)0.064 (2)0.0406 (17)0.0050 (15)0.0003 (15)0.0036 (16)
N20.0472 (16)0.0503 (18)0.0339 (16)0.0026 (14)0.0076 (15)0.0020 (15)
C10.058 (3)0.102 (4)0.064 (3)0.004 (3)0.003 (3)0.008 (3)
C20.040 (2)0.043 (2)0.057 (3)0.0051 (17)0.011 (2)0.0051 (19)
C30.048 (2)0.043 (2)0.073 (3)0.0034 (18)0.012 (2)0.007 (2)
C40.064 (3)0.063 (3)0.076 (4)0.006 (2)0.024 (3)0.012 (3)
C50.071 (3)0.087 (3)0.059 (3)0.013 (3)0.001 (3)0.012 (3)
C60.052 (3)0.079 (3)0.072 (3)0.002 (2)0.008 (2)0.009 (3)
C70.039 (2)0.045 (2)0.067 (3)0.0008 (18)0.007 (2)0.001 (2)
C80.0365 (18)0.050 (2)0.052 (2)0.0055 (18)0.0036 (18)0.0102 (19)
C90.042 (2)0.061 (2)0.059 (3)0.0005 (19)0.006 (2)0.002 (2)
C100.046 (2)0.050 (2)0.039 (2)0.0093 (17)0.0015 (19)0.0059 (19)
C110.045 (2)0.062 (2)0.036 (2)0.0069 (18)0.0002 (17)0.0103 (18)
C120.0370 (17)0.050 (2)0.0338 (19)0.0018 (16)0.0052 (16)0.0062 (17)
C130.043 (2)0.046 (2)0.048 (2)0.0054 (17)0.0036 (19)0.0019 (18)
C140.042 (2)0.055 (2)0.048 (2)0.0012 (18)0.0135 (18)0.002 (2)
C150.050 (2)0.048 (2)0.040 (2)0.0054 (17)0.0137 (19)0.0016 (18)
C160.077 (3)0.071 (3)0.055 (3)0.003 (2)0.029 (2)0.015 (2)
C170.071 (3)0.052 (2)0.052 (3)0.008 (2)0.013 (2)0.008 (2)
C180.053 (2)0.038 (2)0.054 (2)0.0030 (18)0.007 (2)0.001 (2)
C190.048 (2)0.0395 (19)0.058 (3)0.0020 (16)0.012 (2)0.000 (2)
C200.057 (2)0.046 (2)0.051 (2)0.0035 (19)0.007 (2)0.004 (2)
C210.060 (2)0.043 (2)0.070 (3)0.007 (2)0.002 (2)0.003 (2)
C220.057 (2)0.043 (2)0.075 (3)0.0097 (18)0.004 (3)0.011 (2)
C230.052 (2)0.043 (2)0.063 (3)0.0061 (18)0.021 (2)0.012 (2)
C240.098 (4)0.069 (3)0.079 (3)0.003 (3)0.034 (3)0.024 (3)
Geometric parameters (Å, º) top
O1—C21.349 (5)C10—C111.511 (5)
O1—C11.431 (5)C11—C121.499 (5)
O2—C81.346 (4)C11—H11A0.9900
O2—C71.406 (5)C11—H11B0.9900
O3—C81.181 (4)C12—C131.363 (5)
O4—C101.230 (4)C13—C141.397 (5)
O5—C171.223 (5)C13—H130.9500
N1—C101.334 (5)C14—C151.372 (5)
N1—C91.443 (4)C14—H140.9500
N1—H10.8800C15—C171.464 (5)
N2—C121.355 (4)C16—H16A0.9800
N2—C151.377 (4)C16—H16B0.9800
N2—C161.454 (5)C16—H16C0.9800
C1—H1A0.9800C17—C181.479 (6)
C1—H1B0.9800C18—C191.374 (5)
C1—H1C0.9800C18—C211.400 (5)
C2—C31.386 (6)C19—C201.388 (6)
C2—C71.392 (6)C19—H190.9500
C3—C41.374 (6)C20—C231.388 (5)
C3—H30.9500C20—H200.9500
C4—C51.365 (7)C21—C221.367 (6)
C4—H40.9500C21—H210.9500
C5—C61.377 (7)C22—C231.376 (6)
C5—H50.9500C22—H220.9500
C6—C71.374 (6)C23—C241.504 (6)
C6—H60.9500C24—H24A0.9800
C8—C91.505 (5)C24—H24B0.9800
C9—H9A0.9900C24—H24C0.9800
C9—H9B0.9900
C2—O1—C1116.9 (3)C10—C11—H11B109.8
C8—O2—C7117.5 (3)H11A—C11—H11B108.2
C10—N1—C9120.6 (3)N2—C12—C13108.7 (3)
C10—N1—H1119.7N2—C12—C11122.9 (3)
C9—N1—H1119.7C13—C12—C11128.0 (3)
C12—N2—C15108.9 (3)C12—C13—C14107.3 (3)
C12—N2—C16124.7 (3)C12—C13—H13126.4
C15—N2—C16126.4 (3)C14—C13—H13126.4
O1—C1—H1A109.5C15—C14—C13107.9 (3)
O1—C1—H1B109.5C15—C14—H14126.1
H1A—C1—H1B109.5C13—C14—H14126.1
O1—C1—H1C109.5C14—C15—N2107.2 (3)
H1A—C1—H1C109.5C14—C15—C17128.5 (3)
H1B—C1—H1C109.5N2—C15—C17124.2 (3)
O1—C2—C3125.9 (4)N2—C16—H16A109.5
O1—C2—C7116.4 (4)N2—C16—H16B109.5
C3—C2—C7117.7 (4)H16A—C16—H16B109.5
C4—C3—C2120.8 (4)N2—C16—H16C109.5
C4—C3—H3119.6H16A—C16—H16C109.5
C2—C3—H3119.6H16B—C16—H16C109.5
C5—C4—C3120.4 (5)O5—C17—C15122.5 (4)
C5—C4—H4119.8O5—C17—C18120.5 (4)
C3—C4—H4119.8C15—C17—C18117.0 (3)
C4—C5—C6120.3 (5)C19—C18—C21117.9 (4)
C4—C5—H5119.9C19—C18—C17122.2 (3)
C6—C5—H5119.9C21—C18—C17119.9 (4)
C7—C6—C5119.3 (5)C18—C19—C20121.0 (3)
C7—C6—H6120.4C18—C19—H19119.5
C5—C6—H6120.4C20—C19—H19119.5
C6—C7—C2121.5 (4)C23—C20—C19120.5 (4)
C6—C7—O2119.7 (4)C23—C20—H20119.8
C2—C7—O2118.6 (4)C19—C20—H20119.8
O3—C8—O2124.5 (4)C22—C21—C18120.9 (4)
O3—C8—C9127.1 (3)C22—C21—H21119.5
O2—C8—C9108.4 (3)C18—C21—H21119.5
N1—C9—C8113.5 (3)C21—C22—C23121.3 (4)
N1—C9—H9A108.9C21—C22—H22119.4
C8—C9—H9A108.9C23—C22—H22119.4
N1—C9—H9B108.9C22—C23—C20118.4 (4)
C8—C9—H9B108.9C22—C23—C24122.1 (4)
H9A—C9—H9B107.7C20—C23—C24119.6 (4)
O4—C10—N1121.5 (4)C23—C24—H24A109.5
O4—C10—C11121.3 (3)C23—C24—H24B109.5
N1—C10—C11117.2 (3)H24A—C24—H24B109.5
C12—C11—C10109.4 (3)C23—C24—H24C109.5
C12—C11—H11A109.8H24A—C24—H24C109.5
C10—C11—H11A109.8H24B—C24—H24C109.5
C12—C11—H11B109.8

Experimental details

Crystal data
Chemical formulaC24H24N2O5
Mr420.45
Crystal system, space groupOrthorhombic, Pna21
Temperature (K)293
a, b, c (Å)11.307 (3), 19.768 (7), 9.713 (3)
V3)2170.9 (12)
Z4
Radiation typeMo Kα
µ (mm1)0.09
Crystal size (mm)0.30 × 0.25 × 0.20
Data collection
DiffractometerRigaku Weissenberg IP
diffractometer
Absorption correction
No. of measured, independent and
observed [I > 2σ(I)] reflections
19812, 2626, 1938
Rint0.085
(sin θ/λ)max1)0.649
Refinement
R[F2 > 2σ(F2)], wR(F2), S 0.068, 0.109, 1.12
No. of reflections2626
No. of parameters284
No. of restraints1
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å3)0.13, 0.17

Computer programs: TEXRAY (Molecular Structure Corporation, 1999), TEXSAN (Molecular Structure Corporation, 1999), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), X-SEED (Barbour, 2001).

Hydrogen-bonding geometry (A%, °). Cg1 is the centroid of the C2/C3–C7 ring. top
D—H···AD—H (Å)H···A (Å)D···A (Å)D—H···A (°)
N1—H1···O4i0.882.323.1564157
C11—H11B···O4i0.992.403.2586145
C24—H24A···O3ii0.982.503.4418162
C14—H14··· O1iii0.952.433.3722170
C19—H19··· O3iii0.952.563.2300127
C13—H13··· Cg1iv0.952.853.6961150
Symmetry codes: (i) 1-x,1-y,1/2+z; (ii) 1/2-x,y-1/2,z-1/2 (iii) 1-x,1-y,z-1/2; (iv) x-1,y, z.
 

Acknowledgements

The authors acknowledge support from the Project of the Natural Science Foundation of Fujian Province, China (grant No. E0610024), the Research Project of the Education Bureau of Fujian Province, China (grant No. JA06052) and the Project of the Fuzhou Municipal Bureau of Science and Technology (grant No. 2007-Z-81).

References

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