supplementary materials
2,3-Dibromo-3-phenylpropionic acid
In the crystal of the title compound, C9H8Br2O2, inversion dimers linked by two O-H
O hydrogen bonds occur. All of the carbon and oxygen atoms are disordered over two sets of sites in a 2:1 ratio.
The compound was obtained as a side-product from the reaction of
cyclopentyldiphenyltin cinnamate (0.3 g, 0.6 mmol) and 4-dimethylaminopyridine
hydrobromide perbromide (0.25 g) in a mixture of chloroform and ethanol.
The structure is disordered over two positions with respect of the non-bromide
atoms.
The Br1 atom is connected to the carbon atom in the 2-position in the
major component but is connected to the carbon atom in the 3-position in the
minor component.
Conversely, the Br2 atom is connected to the carbon atom in
the 3-position in the major component but is connected to the carbon atom in
the 2-position in the minor component.
All distances in the major component were restrained to within 0.01 Å of
their equivalents in the minor component.
The phenyl rings were restrained into rigid hexagons of 1.39 Å sides.
Additionally, the four-atom carboxyl and seven-atom benzyl units were
each restrained to be nearly flat.
The anisotropic displacement parameters of the primed atoms were restrained
to be equal to those of the unprimed atoms; these were also restrained to be
nearly isotropic.
In the inital stages of the refinement, the occupancy refined to an approximate
2:1 ratio.
However, with the inclusion of hydrogen atoms, the refinement was
unstable.
Ratios that were either slightly smaller or slightly larger than 2:1 did not
yield any significant differences in the final residual index.
The ratio was then fixed to 2:1
Oxygen and carbon-bound H-atoms were placed in calculated positions (C—H 0.95
to 1.00 Å, O–H 0.84 Å) and were included in the refinement in the riding
model approximation, with U(H) set to 1.2 to
1.5Ueq(C,O).
Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-Seed (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2008).
2,3-Dibromo-3-phenylpropionic acid
top
Crystal data top
| C9H8Br2O2 | F(000) = 1184 |
| Mr = 307.97 | Dx = 2.046 Mg m−3 |
| Orthorhombic, Pbca | Mo Kα radiation, λ = 0.71073 Å |
| Hall symbol: -P 2ac 2ab | Cell parameters from 8127 reflections |
| a = 7.0278 (1) Å | θ = 2.2–28.2° |
| b = 9.7105 (1) Å | µ = 8.07 mm−1 |
| c = 29.2970 (4) Å | T = 100 K |
| V = 1999.33 (4) Å3 | Block, colorless |
| Z = 8 | 0.28 × 0.22 × 0.14 mm |
Data collection top
Bruker SMART APEX diffractometer | 2303 independent reflections |
| Radiation source: fine-focus sealed tube | 2056 reflections with I > 2σ(I) |
| graphite | Rint = 0.027 |
| ω scans | θmax = 27.5°, θmin = 2.8° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −9→9 |
| Tmin = 0.211, Tmax = 0.398 | k = −12→12 |
| 17420 measured reflections | l = −37→38 |
Refinement top
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.025 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.066 | H-atom parameters constrained |
| S = 1.06 | w = 1/[σ2(Fo2) + (0.0337P)2 + 3.2334P] where P = (Fo2 + 2Fc2)/3 |
| 2303 reflections | (Δ/σ)max = 0.001 |
| 127 parameters | Δρmax = 0.61 e Å−3 |
| 83 restraints | Δρmin = −0.62 e Å−3 |
Crystal data top
| C9H8Br2O2 | V = 1999.33 (4) Å3 |
| Mr = 307.97 | Z = 8 |
| Orthorhombic, Pbca | Mo Kα radiation |
| a = 7.0278 (1) Å | µ = 8.07 mm−1 |
| b = 9.7105 (1) Å | T = 100 K |
| c = 29.2970 (4) Å | 0.28 × 0.22 × 0.14 mm |
Data collection top
Bruker SMART APEX diffractometer | 2303 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2056 reflections with I > 2σ(I) |
| Tmin = 0.211, Tmax = 0.398 | Rint = 0.027 |
| 17420 measured reflections | θmax = 27.5° |
Refinement top
| R[F2 > 2σ(F2)] = 0.025 | H-atom parameters constrained |
| wR(F2) = 0.066 | Δρmax = 0.61 e Å−3 |
| S = 1.06 | Δρmin = −0.62 e Å−3 |
| 2303 reflections | Absolute structure: ? |
| 127 parameters | Flack parameter: ? |
| 83 restraints | Rogers parameter: ? |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top| | x | y | z | Uiso*/Ueq | Occ. (<1) |
| Br1 | 0.48392 (4) | 0.31033 (3) | 0.364350 (9) | 0.02208 (9) | |
| Br2 | −0.06355 (4) | 0.45596 (3) | 0.436758 (9) | 0.03094 (10) | |
| O1 | 0.4216 (6) | 0.3279 (4) | 0.48256 (13) | 0.0308 (10) | 0.67 |
| H1O | 0.4765 | 0.3569 | 0.5061 | 0.046* | 0.67 |
| O2 | 0.4214 (10) | 0.5338 (5) | 0.4476 (3) | 0.0209 (10) | 0.67 |
| C1 | 0.3847 (4) | 0.4118 (4) | 0.44922 (12) | 0.0189 (8) | 0.67 |
| C2 | 0.2859 (5) | 0.3388 (4) | 0.40959 (12) | 0.0176 (7) | 0.67 |
| H2 | 0.2344 | 0.2480 | 0.4200 | 0.021* | 0.67 |
| C3 | 0.1313 (5) | 0.4223 (4) | 0.38839 (12) | 0.0183 (7) | 0.67 |
| H3 | 0.1859 | 0.5130 | 0.3790 | 0.022* | 0.67 |
| C4 | 0.0358 (4) | 0.3575 (5) | 0.34721 (14) | 0.0133 (8) | 0.67 |
| C5 | −0.0307 (8) | 0.2228 (5) | 0.3486 (3) | 0.0186 (11) | 0.67 |
| H5 | −0.0167 | 0.1697 | 0.3756 | 0.022* | 0.67 |
| C6 | −0.1176 (9) | 0.1657 (9) | 0.3104 (4) | 0.0224 (6) | 0.67 |
| H6 | −0.1631 | 0.0736 | 0.3114 | 0.027* | 0.67 |
| C7 | −0.1381 (9) | 0.2433 (15) | 0.2709 (3) | 0.0181 (8) | 0.67 |
| H7 | −0.1976 | 0.2043 | 0.2448 | 0.022* | 0.67 |
| C8 | −0.0716 (13) | 0.3781 (14) | 0.26947 (16) | 0.0206 (7) | 0.67 |
| H8 | −0.0856 | 0.4311 | 0.2424 | 0.025* | 0.67 |
| C9 | 0.0154 (11) | 0.4352 (8) | 0.3076 (2) | 0.0183 (9) | 0.67 |
| H9 | 0.0608 | 0.5273 | 0.3067 | 0.022* | 0.67 |
| O1' | 0.3463 (14) | 0.3474 (10) | 0.4912 (3) | 0.0308 (10) | 0.33 |
| H1'O | 0.4202 | 0.3715 | 0.5122 | 0.046* | 0.33 |
| O2' | 0.380 (2) | 0.5445 (11) | 0.4542 (7) | 0.0209 (10) | 0.33 |
| C1' | 0.3118 (9) | 0.4305 (9) | 0.4576 (2) | 0.0189 (8) | 0.33 |
| C2' | 0.1737 (9) | 0.3684 (7) | 0.4228 (2) | 0.0176 (7) | 0.33 |
| H2' | 0.1633 | 0.2666 | 0.4274 | 0.021* | 0.33 |
| C3' | 0.2239 (9) | 0.3993 (8) | 0.3748 (2) | 0.0183 (7) | 0.33 |
| H3' | 0.2355 | 0.5012 | 0.3709 | 0.022* | 0.33 |
| C4' | 0.0862 (9) | 0.3432 (12) | 0.3394 (3) | 0.0133 (8) | 0.33 |
| C5' | 0.0090 (19) | 0.2117 (12) | 0.3425 (6) | 0.0186 (11) | 0.33 |
| H5' | 0.0421 | 0.1536 | 0.3674 | 0.022* | 0.33 |
| C6' | −0.1164 (19) | 0.165 (2) | 0.3092 (8) | 0.0224 (6) | 0.33 |
| H6' | −0.1692 | 0.0754 | 0.3113 | 0.027* | 0.33 |
| C7' | −0.1648 (18) | 0.250 (3) | 0.2729 (6) | 0.0181 (8) | 0.33 |
| H7' | −0.2505 | 0.2185 | 0.2501 | 0.022* | 0.33 |
| C8' | −0.088 (3) | 0.382 (3) | 0.2698 (4) | 0.0206 (7) | 0.33 |
| H8' | −0.1207 | 0.4398 | 0.2449 | 0.025* | 0.33 |
| C9' | 0.038 (2) | 0.4282 (17) | 0.3031 (5) | 0.0183 (9) | 0.33 |
| H9' | 0.0906 | 0.5181 | 0.3010 | 0.022* | 0.33 |
Atomic displacement parameters (Å2) top| | U11 | U22 | U33 | U12 | U13 | U23 |
| Br1 | 0.02081 (14) | 0.02271 (15) | 0.02272 (15) | −0.00251 (10) | −0.00187 (10) | −0.00479 (10) |
| Br2 | 0.03118 (17) | 0.04015 (19) | 0.02150 (15) | 0.00134 (13) | 0.00331 (11) | −0.00921 (12) |
| O1 | 0.055 (3) | 0.0188 (16) | 0.0182 (18) | −0.0063 (19) | −0.0143 (18) | 0.0006 (13) |
| O2 | 0.034 (3) | 0.0169 (12) | 0.012 (3) | 0.0006 (16) | −0.0033 (18) | −0.0032 (12) |
| C1 | 0.023 (2) | 0.0199 (18) | 0.0139 (17) | −0.0030 (19) | −0.0010 (16) | −0.0003 (14) |
| C2 | 0.0211 (17) | 0.0149 (15) | 0.0166 (16) | −0.0017 (14) | 0.0007 (13) | −0.0010 (12) |
| C3 | 0.021 (2) | 0.0159 (16) | 0.0175 (17) | −0.0033 (15) | 0.0002 (14) | −0.0028 (13) |
| C4 | 0.007 (2) | 0.0153 (17) | 0.017 (2) | 0.0062 (19) | 0.0015 (16) | −0.0077 (14) |
| C5 | 0.016 (3) | 0.0174 (16) | 0.023 (3) | 0.0023 (17) | −0.002 (2) | −0.0009 (15) |
| C6 | 0.0180 (12) | 0.0183 (13) | 0.0310 (15) | −0.0018 (10) | −0.0052 (11) | −0.0067 (11) |
| C7 | 0.009 (2) | 0.0239 (19) | 0.0215 (14) | 0.006 (2) | −0.0035 (16) | −0.0106 (11) |
| C8 | 0.0169 (19) | 0.0259 (15) | 0.0190 (12) | 0.0082 (15) | 0.0007 (11) | −0.0025 (10) |
| C9 | 0.017 (2) | 0.0167 (14) | 0.0211 (18) | 0.0027 (13) | 0.0015 (14) | −0.0037 (14) |
| O1' | 0.055 (3) | 0.0188 (16) | 0.0182 (18) | −0.0063 (19) | −0.0143 (18) | 0.0006 (13) |
| O2' | 0.034 (3) | 0.0169 (12) | 0.012 (3) | 0.0006 (16) | −0.0033 (18) | −0.0032 (12) |
| C1' | 0.023 (2) | 0.0199 (18) | 0.0139 (17) | −0.0030 (19) | −0.0010 (16) | −0.0003 (14) |
| C2' | 0.0211 (17) | 0.0149 (15) | 0.0166 (16) | −0.0017 (14) | 0.0007 (13) | −0.0010 (12) |
| C3' | 0.021 (2) | 0.0159 (16) | 0.0175 (17) | −0.0033 (15) | 0.0002 (14) | −0.0028 (13) |
| C4' | 0.007 (2) | 0.0153 (17) | 0.017 (2) | 0.0062 (19) | 0.0015 (16) | −0.0077 (14) |
| C5' | 0.016 (3) | 0.0174 (16) | 0.023 (3) | 0.0023 (17) | −0.002 (2) | −0.0009 (15) |
| C6' | 0.0180 (12) | 0.0183 (13) | 0.0310 (15) | −0.0018 (10) | −0.0052 (11) | −0.0067 (11) |
| C7' | 0.009 (2) | 0.0239 (19) | 0.0215 (14) | 0.006 (2) | −0.0035 (16) | −0.0106 (11) |
| C8' | 0.0169 (19) | 0.0259 (15) | 0.0190 (12) | 0.0082 (15) | 0.0007 (11) | −0.0025 (10) |
| C9' | 0.017 (2) | 0.0167 (14) | 0.0211 (18) | 0.0027 (13) | 0.0015 (14) | −0.0037 (14) |
Geometric parameters (Å, °) top
| Br1—C2 | 1.942 (4) | C8—H8 | 0.9500 |
| Br1—C3' | 2.044 (6) | C9—H9 | 0.9500 |
| Br2—C2' | 1.916 (6) | O1'—C1' | 1.295 (8) |
| Br2—C3 | 1.997 (3) | O1'—H1'O | 0.8400 |
| O1—C1 | 1.298 (4) | O2'—C1' | 1.212 (8) |
| O1—H1O | 0.8400 | C1'—C2' | 1.533 (8) |
| O2—C1 | 1.213 (5) | C2'—C3' | 1.480 (7) |
| C1—C2 | 1.527 (5) | C2'—H2' | 1.0000 |
| C2—C3 | 1.491 (5) | C3'—C4' | 1.518 (7) |
| C2—H2 | 1.0000 | C3'—H3' | 1.0000 |
| C3—C4 | 1.517 (4) | C4'—C5' | 1.3900 |
| C3—H3 | 1.0000 | C4'—C9' | 1.3900 |
| C4—C5 | 1.3900 | C5'—C6' | 1.3900 |
| C4—C9 | 1.3900 | C5'—H5' | 0.9500 |
| C5—C6 | 1.3900 | C6'—C7' | 1.3900 |
| C5—H5 | 0.9500 | C6'—H6' | 0.9500 |
| C6—C7 | 1.3900 | C7'—C8' | 1.3900 |
| C6—H6 | 0.9500 | C7'—H7' | 0.9500 |
| C7—C8 | 1.3900 | C8'—C9' | 1.3900 |
| C7—H7 | 0.9500 | C8'—H8' | 0.9500 |
| C8—C9 | 1.3900 | C9'—H9' | 0.9500 |
| | | |
| C1—O1—H1O | 120.0 | C1'—O1'—H1'O | 120.0 |
| O2—C1—O1 | 126.8 (6) | O2'—C1'—O1' | 124.0 (13) |
| O2—C1—C2 | 121.4 (6) | O2'—C1'—C2' | 123.8 (13) |
| O1—C1—C2 | 111.8 (4) | O1'—C1'—C2' | 112.3 (8) |
| C3—C2—C1 | 113.3 (3) | C3'—C2'—C1' | 113.7 (6) |
| C3—C2—Br1 | 108.4 (2) | C3'—C2'—Br2 | 108.7 (4) |
| C1—C2—Br1 | 105.0 (2) | C1'—C2'—Br2 | 103.5 (4) |
| C3—C2—H2 | 110.0 | C3'—C2'—H2' | 110.2 |
| C1—C2—H2 | 110.0 | C1'—C2'—H2' | 110.2 |
| Br1—C2—H2 | 110.0 | Br2—C2'—H2' | 110.2 |
| C2—C3—C4 | 115.4 (3) | C2'—C3'—C4' | 115.0 (6) |
| C2—C3—Br2 | 107.0 (2) | C2'—C3'—Br1 | 105.6 (4) |
| C4—C3—Br2 | 109.20 (19) | C4'—C3'—Br1 | 108.5 (4) |
| C2—C3—H3 | 108.3 | C2'—C3'—H3' | 109.2 |
| C4—C3—H3 | 108.3 | C4'—C3'—H3' | 109.2 |
| Br2—C3—H3 | 108.3 | Br1—C3'—H3' | 109.2 |
| C5—C4—C9 | 120.0 | C5'—C4'—C9' | 120.0 |
| C5—C4—C3 | 121.0 (5) | C5'—C4'—C3' | 122.3 (11) |
| C9—C4—C3 | 119.0 (5) | C9'—C4'—C3' | 117.7 (11) |
| C4—C5—C6 | 120.0 | C4'—C5'—C6' | 120.0 |
| C4—C5—H5 | 120.0 | C4'—C5'—H5' | 120.0 |
| C6—C5—H5 | 120.0 | C6'—C5'—H5' | 120.0 |
| C7—C6—C5 | 120.0 | C7'—C6'—C5' | 120.0 |
| C7—C6—H6 | 120.0 | C7'—C6'—H6' | 120.0 |
| C5—C6—H6 | 120.0 | C5'—C6'—H6' | 120.0 |
| C6—C7—C8 | 120.0 | C6'—C7'—C8' | 120.0 |
| C6—C7—H7 | 120.0 | C6'—C7'—H7' | 120.0 |
| C8—C7—H7 | 120.0 | C8'—C7'—H7' | 120.0 |
| C7—C8—C9 | 120.0 | C7'—C8'—C9' | 120.0 |
| C7—C8—H8 | 120.0 | C7'—C8'—H8' | 120.0 |
| C9—C8—H8 | 120.0 | C9'—C8'—H8' | 120.0 |
| C8—C9—C4 | 120.0 | C8'—C9'—C4' | 120.0 |
| C8—C9—H9 | 120.0 | C8'—C9'—H9' | 120.0 |
| C4—C9—H9 | 120.0 | C4'—C9'—H9' | 120.0 |
| | | |
| O2—C1—C2—C3 | −40.3 (4) | O2'—C1'—C2'—Br2 | −77.8 (5) |
| O1—C1—C2—C3 | 140.0 (3) | O1'—C1'—C2'—Br2 | 102.1 (5) |
| O2—C1—C2—Br1 | 77.8 (3) | C3—Br2—C2'—C3' | 0.9 (4) |
| O1—C1—C2—Br1 | −101.9 (2) | C3—Br2—C2'—C1' | 122.1 (7) |
| C1—C2—C3—C4 | 176.8 (3) | C1'—C2'—C3'—C4' | −178.0 (6) |
| Br1—C2—C3—C4 | 60.7 (4) | Br2—C2'—C3'—C4' | −63.3 (7) |
| C1—C2—C3—Br2 | −61.5 (3) | C1'—C2'—C3'—Br1 | 62.4 (6) |
| Br1—C2—C3—Br2 | −177.59 (16) | Br2—C2'—C3'—Br1 | 177.1 (3) |
| C2—C3—C4—C5 | 49.8 (4) | C2—Br1—C3'—C2' | 0.1 (3) |
| Br2—C3—C4—C5 | −70.8 (3) | C2—Br1—C3'—C4' | −123.7 (8) |
| C2—C3—C4—C9 | −130.2 (4) | C2'—C3'—C4'—C5' | −42.3 (8) |
| Br2—C3—C4—C9 | 109.2 (3) | Br1—C3'—C4'—C5' | 75.6 (6) |
| C9—C4—C5—C6 | 0.0 | C2'—C3'—C4'—C9' | 137.7 (8) |
| C3—C4—C5—C6 | −179.99 (8) | Br1—C3'—C4'—C9' | −104.3 (6) |
| C4—C5—C6—C7 | 0.0 | C9'—C4'—C5'—C6' | 0.0 |
| C5—C6—C7—C8 | 0.0 | C3'—C4'—C5'—C6' | −179.96 (9) |
| C6—C7—C8—C9 | 0.0 | C4'—C5'—C6'—C7' | 0.0 |
| C7—C8—C9—C4 | 0.0 | C5'—C6'—C7'—C8' | 0.0 |
| C5—C4—C9—C8 | 0.0 | C6'—C7'—C8'—C9' | 0.0 |
| C3—C4—C9—C8 | 179.99 (8) | C7'—C8'—C9'—C4' | 0.0 |
| O2'—C1'—C2'—C3' | 40.0 (6) | C5'—C4'—C9'—C8' | 0.0 |
| O1'—C1'—C2'—C3' | −140.1 (6) | C3'—C4'—C9'—C8' | 179.96 (8) |
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1—H1o···O2i | 0.84 | 1.86 | 2.68 (1) | 165 |
| O1'—H1'o···O2i | 0.84 | 1.86 | 2.69 (1) | 166 |
| Symmetry codes: (i) −x+1, −y+1, −z+1. |
Table 1
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1—H1o···O2i | 0.84 | 1.86 | 2.68 (1) | 165 |
| O1'—H1'o···O2i | 0.84 | 1.86 | 2.69 (1) | 166 |
| Symmetry codes: (i) −x+1, −y+1, −z+1. |
We thank the University of Malaya for funding this study (FR155/2007 A) and
also for the purchase of the diffractometer.
Barbour, L. J. (2001). J. Supramol. Chem. 1, 189–191.
Bruker (2007). APEX2 and SAINT. Bruker AXS Inc., Madison, Wisconsin, USA.
O'Hagan, D., Rzepa, H. S., Schüler, M. & Slawin, A. M. Z. (2006). Beilstein J. Org. Chem. 2, No. 19.
Shaw, J. P., Tan, E. W. & Blackman, A. G. (1995). Acta Cryst. C51, 134–135.
Sheldrick, G. M. (1996). SADABS. University of Göttingen, Germany.
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122.
Westrip, S. P. (2008). publCIF. In preparation.
The compound (Scheme I, Fig. 1) was obtained as a side-product from the reaction of cyclopentyldiphenyltin cinnamate and 4-dimethylaminopyridine hydrobromide perbromide. Possibly, bromine added across the double bond of the cinnamate group followed by cleavage of the tin–carbon bond. Only few dihalogenproponic acid derivatives have been characterized by X-ray crystallography. These are limited to, for example, threo-methyl 2,3-difluoropropionate (O'Hagan et al., 2006) and R-methyl 3-bromo-2-chloro-3-phenylpropionate (Shaw et al., 1995).