supplementary materials
5-Phenyl-7,8-dihydro-1,3-dioxano[4,5-g]isoquinoline
The title compound was synthesized by following Bischler-Napieralski procedures:
0.01 mol N-[2-(3, 4-methylenedioxy)phenyl]benzamide (synthesized by β-(3,
4-methylenedioxy)phenethylamine, Benzoyl chloride and Et3N) was dissolved in
20 ml CH3CN, 5 g POCl3 was added dropwise, the mixture was refluxed under
N2 for 5 h, after cooled the volatiles were evaporated under vacuum, then
water was added and adjusted the pH to 8, after extracted with CH2Cl2, the
organic layers was washed with saturated NaCl and dried with Na2SO4, the
product was isolated by evaporation of the solvent and recrystalization, 2.31 g, Yield: 92%. Single crystals suitable for X-ray measurements were obtained
by recrystallization from ethyl acetate at room temperature.
H atoms were positioned geometrically and refined using a riding model, with
C—H = 0.96 Å, with Uiso(H) = 1.2 times Ueq(C).
Data collection: RAPID-AUTO (Rigaku, 2004); cell refinement: RAPID-AUTO (Rigaku, 2004); data reduction: RAPID-AUTO (Rigaku, 2004); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
5-Phenyl-7,8-dihydro-1,3-dioxano[4,5-g]isoquinoline
top
Crystal data top
| C16H13NO2 | Z = 2 |
| Mr = 251.27 | F(000) = 264 |
| Triclinic, P1 | Dx = 1.340 Mg m−3 |
| Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
| a = 8.5005 (17) Å | Cell parameters from 1451 reflections |
| b = 8.5297 (17) Å | θ = 2.5–23.4° |
| c = 10.143 (2) Å | µ = 0.09 mm−1 |
| α = 109.07 (3)° | T = 293 K |
| β = 109.44 (2)° | Block, colorless |
| γ = 99.70 (3)° | 0.28 × 0.10 × 0.08 mm |
| V = 622.9 (2) Å3 | |
Data collection top
Rigaku R-AXIS RAPID IP area-detector diffractometer | 2145 independent reflections |
| Radiation source: Rotating Anode | 1275 reflections with I > 2σ(I) |
| graphite | Rint = 0.037 |
| ω oscillation scans | θmax = 25.0°, θmin = 3.1° |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | h = −10→10 |
| Tmin = 0.976, Tmax = 0.993 | k = −10→10 |
| 4801 measured reflections | l = −11→12 |
Refinement top
| Refinement on F2 | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| R[F2 > 2σ(F2)] = 0.041 | H-atom parameters constrained |
| wR(F2) = 0.144 | w = 1/[σ2(Fo2) + (0.0514P)2 + 0.1397P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.13 | (Δ/σ)max < 0.001 |
| 2145 reflections | Δρmax = 0.20 e Å−3 |
| 173 parameters | Δρmin = −0.20 e Å−3 |
| 0 restraints | Extinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.048 (8) |
Crystal data top
| C16H13NO2 | γ = 99.70 (3)° |
| Mr = 251.27 | V = 622.9 (2) Å3 |
| Triclinic, P1 | Z = 2 |
| a = 8.5005 (17) Å | Mo Kα radiation |
| b = 8.5297 (17) Å | µ = 0.09 mm−1 |
| c = 10.143 (2) Å | T = 293 K |
| α = 109.07 (3)° | 0.28 × 0.10 × 0.08 mm |
| β = 109.44 (2)° | |
Data collection top
Rigaku R-AXIS RAPID IP area-detector diffractometer | 2145 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 1275 reflections with I > 2σ(I) |
| Tmin = 0.976, Tmax = 0.993 | Rint = 0.037 |
| 4801 measured reflections | θmax = 25.0° |
Refinement top
| R[F2 > 2σ(F2)] = 0.041 | H-atom parameters constrained |
| wR(F2) = 0.144 | Δρmax = 0.20 e Å−3 |
| S = 1.13 | Δρmin = −0.20 e Å−3 |
| 2145 reflections | Absolute structure: ? |
| 173 parameters | Flack parameter: ? |
| 0 restraints | Rogers parameter: ? |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top| | x | y | z | Uiso*/Ueq | |
| O1 | 0.9151 (2) | 0.7157 (2) | 1.18121 (17) | 0.0688 (6) | |
| O2 | 0.6920 (2) | 0.4574 (2) | 1.01260 (17) | 0.0656 (6) | |
| N1 | 0.8054 (3) | 0.6182 (3) | 0.5069 (2) | 0.0638 (6) | |
| C1 | 0.5553 (3) | 0.2889 (4) | 0.3031 (3) | 0.0614 (7) | |
| H1B | 0.5296 | 0.3808 | 0.2795 | 0.074* | |
| C2 | 0.4741 (4) | 0.1204 (4) | 0.1932 (3) | 0.0734 (8) | |
| H2A | 0.3938 | 0.0996 | 0.0961 | 0.088* | |
| C3 | 0.5097 (4) | −0.0172 (4) | 0.2247 (3) | 0.0772 (9) | |
| H3A | 0.4550 | −0.1308 | 0.1496 | 0.093* | |
| C4 | 0.6281 (4) | 0.0149 (4) | 0.3695 (3) | 0.0692 (8) | |
| H4A | 0.6521 | −0.0779 | 0.3924 | 0.083* | |
| C5 | 0.7107 (3) | 0.1825 (3) | 0.4798 (3) | 0.0579 (7) | |
| H5A | 0.7914 | 0.2022 | 0.5765 | 0.069* | |
| C6 | 0.6756 (3) | 0.3230 (3) | 0.4491 (2) | 0.0511 (6) | |
| C7 | 0.7705 (3) | 0.5073 (3) | 0.5614 (2) | 0.0521 (6) | |
| C8 | 0.9013 (4) | 0.7997 (3) | 0.6168 (3) | 0.0679 (8) | |
| H8A | 0.8187 | 0.8570 | 0.6406 | 0.081* | |
| H8B | 0.9573 | 0.8600 | 0.5702 | 0.081* | |
| C9 | 1.0385 (4) | 0.8139 (3) | 0.7632 (3) | 0.0604 (7) | |
| H9A | 1.1279 | 0.7664 | 0.7424 | 0.072* | |
| H9B | 1.0943 | 0.9354 | 0.8351 | 0.072* | |
| C10 | 0.9508 (3) | 0.7137 (3) | 0.8300 (2) | 0.0497 (6) | |
| C11 | 0.8169 (3) | 0.5585 (3) | 0.7272 (2) | 0.0468 (6) | |
| C12 | 0.7220 (3) | 0.4618 (3) | 0.7802 (2) | 0.0490 (6) | |
| H12A | 0.6326 | 0.3575 | 0.7130 | 0.059* | |
| C13 | 0.7659 (3) | 0.5266 (3) | 0.9336 (2) | 0.0492 (6) | |
| C14 | 0.8994 (3) | 0.6795 (3) | 1.0347 (2) | 0.0510 (6) | |
| C15 | 0.9955 (3) | 0.7752 (3) | 0.9871 (2) | 0.0525 (6) | |
| H15A | 1.0871 | 0.8771 | 1.0566 | 0.063* | |
| C16 | 0.7728 (4) | 0.5854 (4) | 1.1664 (3) | 0.0713 (8) | |
| H16A | 0.8159 | 0.5318 | 1.2363 | 0.086* | |
| H16B | 0.6882 | 0.6379 | 1.1918 | 0.086* | |
Atomic displacement parameters (Å2) top| | U11 | U22 | U33 | U12 | U13 | U23 |
| O1 | 0.0833 (14) | 0.0751 (12) | 0.0399 (9) | 0.0155 (10) | 0.0240 (9) | 0.0202 (8) |
| O2 | 0.0861 (14) | 0.0677 (11) | 0.0470 (10) | 0.0158 (10) | 0.0377 (9) | 0.0221 (9) |
| N1 | 0.0805 (16) | 0.0671 (14) | 0.0497 (12) | 0.0199 (12) | 0.0329 (11) | 0.0267 (11) |
| C1 | 0.0513 (15) | 0.0779 (18) | 0.0514 (15) | 0.0196 (13) | 0.0185 (12) | 0.0255 (14) |
| C2 | 0.0562 (17) | 0.091 (2) | 0.0482 (15) | 0.0073 (15) | 0.0087 (12) | 0.0213 (15) |
| C3 | 0.080 (2) | 0.0689 (18) | 0.0552 (16) | 0.0037 (16) | 0.0187 (14) | 0.0116 (14) |
| C4 | 0.079 (2) | 0.0613 (16) | 0.0564 (16) | 0.0162 (14) | 0.0246 (14) | 0.0179 (13) |
| C5 | 0.0633 (16) | 0.0625 (15) | 0.0404 (13) | 0.0169 (13) | 0.0184 (11) | 0.0168 (12) |
| C6 | 0.0522 (15) | 0.0630 (15) | 0.0383 (12) | 0.0164 (12) | 0.0232 (10) | 0.0173 (11) |
| C7 | 0.0588 (16) | 0.0615 (15) | 0.0433 (12) | 0.0229 (12) | 0.0272 (11) | 0.0221 (12) |
| C8 | 0.087 (2) | 0.0622 (16) | 0.0626 (16) | 0.0183 (14) | 0.0396 (15) | 0.0296 (14) |
| C9 | 0.0646 (17) | 0.0594 (15) | 0.0592 (15) | 0.0142 (12) | 0.0327 (13) | 0.0223 (12) |
| C10 | 0.0498 (14) | 0.0533 (13) | 0.0471 (13) | 0.0170 (11) | 0.0226 (11) | 0.0190 (11) |
| C11 | 0.0517 (14) | 0.0525 (13) | 0.0393 (12) | 0.0180 (11) | 0.0220 (10) | 0.0186 (10) |
| C12 | 0.0533 (15) | 0.0522 (13) | 0.0427 (12) | 0.0180 (11) | 0.0221 (10) | 0.0178 (11) |
| C13 | 0.0587 (15) | 0.0553 (14) | 0.0405 (12) | 0.0199 (11) | 0.0273 (11) | 0.0202 (11) |
| C14 | 0.0596 (16) | 0.0587 (14) | 0.0359 (12) | 0.0255 (12) | 0.0197 (11) | 0.0178 (11) |
| C15 | 0.0507 (14) | 0.0560 (14) | 0.0458 (13) | 0.0150 (11) | 0.0187 (11) | 0.0171 (11) |
| C16 | 0.087 (2) | 0.0816 (19) | 0.0449 (14) | 0.0216 (16) | 0.0341 (14) | 0.0215 (14) |
Geometric parameters (Å, °) top
| O1—C14 | 1.370 (3) | C7—C11 | 1.481 (3) |
| O1—C16 | 1.427 (3) | C8—C9 | 1.504 (4) |
| O2—C13 | 1.381 (3) | C8—H8A | 0.9700 |
| O2—C16 | 1.421 (3) | C8—H8B | 0.9700 |
| N1—C7 | 1.283 (3) | C9—C10 | 1.499 (3) |
| N1—C8 | 1.465 (3) | C9—H9A | 0.9700 |
| C1—C2 | 1.375 (4) | C9—H9B | 0.9700 |
| C1—C6 | 1.391 (3) | C10—C11 | 1.391 (3) |
| C1—H1B | 0.9300 | C10—C15 | 1.394 (3) |
| C2—C3 | 1.368 (4) | C11—C12 | 1.406 (3) |
| C2—H2A | 0.9300 | C12—C13 | 1.359 (3) |
| C3—C4 | 1.380 (4) | C12—H12A | 0.9300 |
| C3—H3A | 0.9300 | C13—C14 | 1.376 (3) |
| C4—C5 | 1.372 (3) | C14—C15 | 1.364 (3) |
| C4—H4A | 0.9300 | C15—H15A | 0.9300 |
| C5—C6 | 1.387 (3) | C16—H16A | 0.9700 |
| C5—H5A | 0.9300 | C16—H16B | 0.9700 |
| C6—C7 | 1.487 (3) | | |
| | | |
| C14—O1—C16 | 105.44 (18) | C10—C9—C8 | 108.3 (2) |
| C13—O2—C16 | 105.24 (18) | C10—C9—H9A | 110.0 |
| C7—N1—C8 | 117.11 (19) | C8—C9—H9A | 110.0 |
| C2—C1—C6 | 120.6 (3) | C10—C9—H9B | 110.0 |
| C2—C1—H1B | 119.7 | C8—C9—H9B | 110.0 |
| C6—C1—H1B | 119.7 | H9A—C9—H9B | 108.4 |
| C3—C2—C1 | 120.9 (3) | C11—C10—C15 | 121.1 (2) |
| C3—C2—H2A | 119.6 | C11—C10—C9 | 116.9 (2) |
| C1—C2—H2A | 119.6 | C15—C10—C9 | 122.0 (2) |
| C2—C3—C4 | 119.1 (3) | C10—C11—C12 | 120.3 (2) |
| C2—C3—H3A | 120.5 | C10—C11—C7 | 117.7 (2) |
| C4—C3—H3A | 120.5 | C12—C11—C7 | 121.8 (2) |
| C5—C4—C3 | 120.5 (3) | C13—C12—C11 | 117.4 (2) |
| C5—C4—H4A | 119.7 | C13—C12—H12A | 121.3 |
| C3—C4—H4A | 119.7 | C11—C12—H12A | 121.3 |
| C4—C5—C6 | 120.9 (2) | C12—C13—C14 | 121.9 (2) |
| C4—C5—H5A | 119.6 | C12—C13—O2 | 128.3 (2) |
| C6—C5—H5A | 119.6 | C14—C13—O2 | 109.77 (19) |
| C5—C6—C1 | 118.0 (2) | C15—C14—O1 | 127.9 (2) |
| C5—C6—C7 | 122.7 (2) | C15—C14—C13 | 122.1 (2) |
| C1—C6—C7 | 119.0 (2) | O1—C14—C13 | 110.0 (2) |
| N1—C7—C11 | 122.4 (2) | C14—C15—C10 | 117.2 (2) |
| N1—C7—C6 | 116.7 (2) | C14—C15—H15A | 121.4 |
| C11—C7—C6 | 120.8 (2) | C10—C15—H15A | 121.4 |
| N1—C8—C9 | 112.5 (2) | O2—C16—O1 | 108.54 (19) |
| N1—C8—H8A | 109.1 | O2—C16—H16A | 110.0 |
| C9—C8—H8A | 109.1 | O1—C16—H16A | 110.0 |
| N1—C8—H8B | 109.1 | O2—C16—H16B | 110.0 |
| C9—C8—H8B | 109.1 | O1—C16—H16B | 110.0 |
| H8A—C8—H8B | 107.8 | H16A—C16—H16B | 108.4 |
| | | |
| C6—C1—C2—C3 | −0.1 (4) | N1—C7—C11—C10 | −22.2 (4) |
| C1—C2—C3—C4 | 0.5 (5) | C6—C7—C11—C10 | 159.5 (2) |
| C2—C3—C4—C5 | −0.8 (5) | N1—C7—C11—C12 | 153.3 (3) |
| C3—C4—C5—C6 | 0.9 (4) | C6—C7—C11—C12 | −25.0 (4) |
| C4—C5—C6—C1 | −0.5 (4) | C10—C11—C12—C13 | 0.3 (4) |
| C4—C5—C6—C7 | −175.7 (2) | C7—C11—C12—C13 | −175.0 (2) |
| C2—C1—C6—C5 | 0.1 (4) | C11—C12—C13—C14 | −0.9 (4) |
| C2—C1—C6—C7 | 175.6 (2) | C11—C12—C13—O2 | 179.4 (2) |
| C8—N1—C7—C11 | 2.5 (4) | C16—O2—C13—C12 | −173.7 (3) |
| C8—N1—C7—C6 | −179.1 (2) | C16—O2—C13—C14 | 6.5 (3) |
| C5—C6—C7—N1 | 142.5 (3) | C16—O1—C14—C15 | 174.1 (3) |
| C1—C6—C7—N1 | −32.7 (3) | C16—O1—C14—C13 | −5.3 (3) |
| C5—C6—C7—C11 | −39.2 (3) | C12—C13—C14—C15 | 0.0 (4) |
| C1—C6—C7—C11 | 145.6 (2) | O2—C13—C14—C15 | 179.8 (2) |
| C7—N1—C8—C9 | 37.6 (3) | C12—C13—C14—O1 | 179.4 (2) |
| N1—C8—C9—C10 | −56.4 (3) | O2—C13—C14—O1 | −0.8 (3) |
| C8—C9—C10—C11 | 37.8 (3) | O1—C14—C15—C10 | −178.0 (2) |
| C8—C9—C10—C15 | −139.8 (3) | C13—C14—C15—C10 | 1.3 (4) |
| C15—C10—C11—C12 | 1.0 (4) | C11—C10—C15—C14 | −1.8 (4) |
| C9—C10—C11—C12 | −176.6 (2) | C9—C10—C15—C14 | 175.7 (2) |
| C15—C10—C11—C7 | 176.5 (2) | C13—O2—C16—O1 | −9.7 (3) |
| C9—C10—C11—C7 | −1.1 (3) | C14—O1—C16—O2 | 9.3 (3) |
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| C3—H3A···O2i | 0.93 | 2.55 | 3.465 (4) | 169 |
| Symmetry codes: (i) −x+1, −y, −z+1. |
Table 1
Hydrogen-bond geometry (Å, °) top
| D—H···A | D—H | H···A | D···A | D—H···A |
| C3—H3A···O2i | 0.93 | 2.55 | 3.465 (4) | 169 |
| Symmetry codes: (i) −x+1, −y, −z+1. |
Allen, F. H., Kennard, O., Watson, D. G., Brammer, L., Orpen, A. G. & Taylor, R. (1987). J. Chem. Soc. Perkin Trans. 2, pp. S1–19.
Bentley, K. B. (2000). Nat. Prod. Rep. 17, 247–268.
Bischler, A. & Napieralski, B. (1893). Chem. Ber. 26, 1903.
Higashi, T. (1995). ABSCOR. Rigaku Corporation, Tokyo, Japan.
Jayaraman, M., Fox, B. M., Hollingshead, M., Kohlhagen, G., Pommier, Y. & Cushman, M. (2002). J. Med. Chem. 44, 242–249.
Rigaku (2004). RAPID-AUTO. Rigaku Corporation, Takyo, Japan
Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122.
Isoquinolinones are important compounds from both the synthetic and applied points of view. Their structures are incorporated in several alkaloids (Bentley, 20000 and other pharmacologically important compounds (Jayaraman et al., 2002). Of the variety of methods that have been developed for the synthesis of the isoquinoline ring system, the most commonly used procedure is the Bischler-Napieralski reaction (Bischler & Napieralski, 1893). We now wish to report an effective Bischler-Napieralski procedure for the synthesis of 1,2,3,4-tetrahydro-6,7-dimethoxy-1-phenylisoquinoline the title compound (I) and report its crystal structure here.
In compound (I), all bond lengths in the molecular are normal (Allen et al., 1987). The benzene ring C10–C15 and bonded atoms C7, C9, O1 and O2 are coplanar, the largest deviation from the mean plane being 0.039 (2)Å for atom O1. The other benzene ring, C1–C6, and bonded atoms C7 are also coplanar, the largest deviation from the mean plane being 0.032 (2)Å. The two benzene rings make a dihedral angle of 55.5 (2)°.
The relatively short distance of 3.595 (3) between the centroids of benzene ring C10—C15 and 1,3-dioxole ring C13/C14/C16/O1/O2 [at -x,1 - y,-z] indicates the presence of weak π-π interactions, The crystal packing is stabilized by intermolecular C—H···O hydrogen bonds, linking the molecules into ladders of dimers.