Acta Cryst. (2009). E65, o5 [ doi:10.1107/S1600536808039986 ]
In the molecule of the title compound, C20H11ClN2O3, the pyran ring adopts a flattened-boat conformation. In the crystal structure, intermolecular N-H
N and N-H
O hydrogen bonds generate edge-fused R22(12) and R22(14) ring motifs; the hydrogen-bonded motifs are linked to each other, forming a three-dimensional network. A
-
contact [centroid-to-centroid distance = 3.879 (3) Å] between the chlorophenyl rings may further stabilize the structure.
The title compound was prepared by the reaction of 2-(2-chlorobenzylidene)- malononitrile (1 mmol) and 2-hydroxynaphthalene-1,4-dione (1 mmol) in glacial acetic acid without catalyst. Crystals suitable for X-ray analysis were obtained by slow evaporation of an aqueous ethanol solution (95%) (yield; 90%; m.p. > 573 K).
H atoms were positioned geometrically, with N-H = 0.86 Å (for NH2) and C-H = 0.93 and 0.98 Å for aromatic and methine H, respectively, and constrained to ride on their parent atoms with Uiso(H) = 1.2Ueq(C,N).
Data collection: SMART (Bruker, 1997); cell refinement: SAINT (Bruker, 1997); data reduction: SAINT (Bruker, 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2003); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2003).
| C20H11ClN2O3 | Z = 2 |
| Mr = 362.76 | F(000) = 372 |
| Triclinic, P1 | Dx = 1.517 Mg m−3 |
| Hall symbol: -P 1 | Melting point > 573 K |
| a = 8.3201 (10) Å | Mo Kα radiation, λ = 0.71073 Å |
| b = 9.3729 (12) Å | Cell parameters from 959 reflections |
| c = 11.0081 (16) Å | θ = 2.8–25.1° |
| α = 93.015 (1)° | µ = 0.27 mm−1 |
| β = 96.393 (1)° | T = 298 K |
| γ = 110.732 (2)° | Block, orange |
| V = 793.95 (18) Å3 | 0.17 × 0.15 × 0.10 mm |
| Bruker SMART CCD area-detector diffractometer | 2746 independent reflections |
| Radiation source: fine-focus sealed tube | 1566 reflections with I > 2σ(I) |
| graphite | Rint = 0.025 |
| φ and ω scans | θmax = 25.0°, θmin = 1.9° |
| Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −9→9 |
| Tmin = 0.956, Tmax = 0.974 | k = −11→10 |
| 4207 measured reflections | l = −13→8 |
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.053 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.100 | H-atom parameters constrained |
| S = 1.04 | w = 1/[σ2(Fo2) + (0.0295P)2] where P = (Fo2 + 2Fc2)/3 |
| 2746 reflections | (Δ/σ)max < 0.001 |
| 235 parameters | Δρmax = 0.40 e Å−3 |
| 0 restraints | Δρmin = −0.26 e Å−3 |
| C20H11ClN2O3 | γ = 110.732 (2)° |
| Mr = 362.76 | V = 793.95 (18) Å3 |
| Triclinic, P1 | Z = 2 |
| a = 8.3201 (10) Å | Mo Kα radiation |
| b = 9.3729 (12) Å | µ = 0.27 mm−1 |
| c = 11.0081 (16) Å | T = 298 K |
| α = 93.015 (1)° | 0.17 × 0.15 × 0.10 mm |
| β = 96.393 (1)° |
| Bruker SMART CCD area-detector diffractometer | 2746 independent reflections |
| Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1566 reflections with I > 2σ(I) |
| Tmin = 0.956, Tmax = 0.974 | Rint = 0.025 |
| 4207 measured reflections | θmax = 25.0° |
| R[F2 > 2σ(F2)] = 0.053 | H-atom parameters constrained |
| wR(F2) = 0.100 | Δρmax = 0.40 e Å−3 |
| S = 1.04 | Δρmin = −0.26 e Å−3 |
| 2746 reflections | Absolute structure: ? |
| 235 parameters | Flack parameter: ? |
| 0 restraints | Rogers parameter: ? |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| x | y | z | Uiso*/Ueq | ||
| Cl1 | −0.01619 (12) | 0.04001 (10) | 0.69113 (9) | 0.0587 (3) | |
| O1 | 0.1440 (3) | 0.3890 (2) | 0.6133 (2) | 0.0405 (6) | |
| O2 | 0.5886 (3) | 0.2063 (3) | 0.7464 (2) | 0.0541 (7) | |
| O3 | 0.2251 (3) | 0.3753 (3) | 0.3898 (2) | 0.0536 (7) | |
| N1 | −0.0034 (3) | 0.4822 (3) | 0.7313 (2) | 0.0471 (8) | |
| H1A | −0.0304 | 0.5099 | 0.7994 | 0.057* | |
| H1B | −0.0556 | 0.4936 | 0.6626 | 0.057* | |
| N2 | 0.1921 (4) | 0.4871 (4) | 1.0491 (3) | 0.0578 (9) | |
| C1 | 0.1196 (4) | 0.4216 (3) | 0.7320 (3) | 0.0369 (8) | |
| C2 | 0.2135 (4) | 0.3957 (3) | 0.8299 (3) | 0.0344 (8) | |
| C3 | 0.3297 (4) | 0.3028 (3) | 0.8197 (3) | 0.0336 (8) | |
| H3 | 0.4412 | 0.3622 | 0.8696 | 0.040* | |
| C4 | 0.3646 (4) | 0.2940 (3) | 0.6883 (3) | 0.0309 (8) | |
| C5 | 0.5061 (4) | 0.2424 (3) | 0.6626 (3) | 0.0360 (8) | |
| C6 | 0.5448 (4) | 0.2361 (3) | 0.5342 (3) | 0.0339 (8) | |
| C7 | 0.6774 (4) | 0.1889 (4) | 0.5076 (3) | 0.0466 (9) | |
| H7 | 0.7416 | 0.1604 | 0.5699 | 0.056* | |
| C8 | 0.7152 (5) | 0.1837 (4) | 0.3890 (3) | 0.0538 (10) | |
| H8 | 0.8064 | 0.1540 | 0.3718 | 0.065* | |
| C9 | 0.6180 (4) | 0.2225 (4) | 0.2961 (3) | 0.0530 (10) | |
| H9 | 0.6426 | 0.2170 | 0.2160 | 0.064* | |
| C10 | 0.4851 (4) | 0.2690 (4) | 0.3207 (3) | 0.0461 (9) | |
| H10 | 0.4202 | 0.2951 | 0.2574 | 0.055* | |
| C11 | 0.4476 (4) | 0.2770 (3) | 0.4401 (3) | 0.0346 (8) | |
| C12 | 0.3083 (4) | 0.3326 (3) | 0.4679 (3) | 0.0350 (8) | |
| C13 | 0.2762 (4) | 0.3374 (3) | 0.5983 (3) | 0.0337 (8) | |
| C14 | 0.1989 (4) | 0.4470 (4) | 0.9505 (3) | 0.0405 (9) | |
| C15 | 0.2617 (4) | 0.1487 (3) | 0.8721 (3) | 0.0322 (8) | |
| C16 | 0.1126 (4) | 0.0269 (4) | 0.8235 (3) | 0.0374 (9) | |
| C17 | 0.0573 (4) | −0.1101 (4) | 0.8767 (3) | 0.0450 (9) | |
| H17 | −0.0427 | −0.1903 | 0.8412 | 0.054* | |
| C18 | 0.1515 (5) | −0.1260 (4) | 0.9819 (3) | 0.0538 (10) | |
| H18 | 0.1157 | −0.2177 | 1.0179 | 0.065* | |
| C19 | 0.2985 (5) | −0.0068 (4) | 1.0343 (3) | 0.0514 (10) | |
| H19 | 0.3613 | −0.0172 | 1.1065 | 0.062* | |
| C20 | 0.3530 (4) | 0.1287 (4) | 0.9798 (3) | 0.0433 (9) | |
| H20 | 0.4532 | 0.2084 | 1.0158 | 0.052* |
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Cl1 | 0.0512 (6) | 0.0542 (6) | 0.0649 (7) | 0.0171 (4) | −0.0099 (5) | 0.0082 (5) |
| O1 | 0.0409 (14) | 0.0529 (14) | 0.0391 (14) | 0.0302 (12) | 0.0069 (11) | 0.0067 (12) |
| O2 | 0.0534 (16) | 0.0759 (17) | 0.0500 (16) | 0.0423 (14) | 0.0080 (13) | 0.0191 (14) |
| O3 | 0.0643 (17) | 0.0733 (17) | 0.0398 (15) | 0.0459 (14) | 0.0020 (13) | 0.0114 (13) |
| N1 | 0.0525 (19) | 0.0636 (19) | 0.0407 (18) | 0.0403 (16) | 0.0056 (15) | 0.0031 (16) |
| N2 | 0.065 (2) | 0.066 (2) | 0.046 (2) | 0.0297 (18) | 0.0090 (18) | −0.0059 (18) |
| C1 | 0.037 (2) | 0.0340 (19) | 0.044 (2) | 0.0177 (16) | 0.0102 (18) | 0.0047 (17) |
| C2 | 0.037 (2) | 0.0356 (19) | 0.035 (2) | 0.0183 (16) | 0.0072 (17) | 0.0027 (17) |
| C3 | 0.0340 (19) | 0.0366 (19) | 0.033 (2) | 0.0165 (15) | 0.0015 (16) | 0.0036 (17) |
| C4 | 0.0328 (19) | 0.0285 (17) | 0.034 (2) | 0.0135 (15) | 0.0057 (16) | 0.0044 (16) |
| C5 | 0.0319 (19) | 0.0350 (19) | 0.044 (2) | 0.0162 (16) | 0.0015 (18) | 0.0081 (18) |
| C6 | 0.033 (2) | 0.0334 (18) | 0.036 (2) | 0.0121 (15) | 0.0061 (17) | 0.0041 (17) |
| C7 | 0.043 (2) | 0.053 (2) | 0.054 (3) | 0.0278 (18) | 0.0078 (19) | 0.008 (2) |
| C8 | 0.049 (2) | 0.065 (3) | 0.055 (3) | 0.028 (2) | 0.016 (2) | −0.002 (2) |
| C9 | 0.051 (2) | 0.065 (3) | 0.044 (2) | 0.021 (2) | 0.010 (2) | −0.001 (2) |
| C10 | 0.043 (2) | 0.054 (2) | 0.044 (2) | 0.0207 (18) | 0.0074 (19) | 0.003 (2) |
| C11 | 0.035 (2) | 0.0324 (19) | 0.035 (2) | 0.0108 (15) | 0.0047 (17) | −0.0009 (17) |
| C12 | 0.035 (2) | 0.0325 (19) | 0.039 (2) | 0.0132 (15) | 0.0047 (17) | 0.0037 (17) |
| C13 | 0.0346 (19) | 0.0297 (18) | 0.040 (2) | 0.0158 (15) | 0.0061 (17) | 0.0012 (17) |
| C14 | 0.039 (2) | 0.037 (2) | 0.048 (2) | 0.0164 (16) | 0.0055 (19) | 0.008 (2) |
| C15 | 0.0331 (19) | 0.0377 (19) | 0.0338 (19) | 0.0207 (16) | 0.0098 (16) | 0.0064 (17) |
| C16 | 0.036 (2) | 0.042 (2) | 0.042 (2) | 0.0234 (16) | 0.0058 (17) | 0.0035 (18) |
| C17 | 0.041 (2) | 0.036 (2) | 0.062 (3) | 0.0163 (16) | 0.0148 (19) | 0.0048 (19) |
| C18 | 0.062 (3) | 0.050 (2) | 0.063 (3) | 0.031 (2) | 0.021 (2) | 0.023 (2) |
| C19 | 0.059 (3) | 0.059 (3) | 0.046 (2) | 0.032 (2) | 0.009 (2) | 0.015 (2) |
| C20 | 0.045 (2) | 0.047 (2) | 0.040 (2) | 0.0190 (17) | 0.0035 (18) | 0.0086 (18) |
| Cl1—C16 | 1.747 (3) | C7—C8 | 1.379 (5) |
| O1—C1 | 1.380 (4) | C7—H7 | 0.9300 |
| O1—C13 | 1.370 (3) | C8—C9 | 1.377 (4) |
| O2—C5 | 1.223 (3) | C8—H8 | 0.9300 |
| O3—C12 | 1.216 (3) | C9—C10 | 1.372 (4) |
| N1—C1 | 1.334 (3) | C9—H9 | 0.9300 |
| N1—H1A | 0.8600 | C10—C11 | 1.389 (4) |
| N1—H1B | 0.8600 | C10—H10 | 0.9300 |
| N2—C14 | 1.144 (4) | C11—C12 | 1.482 (4) |
| C1—C2 | 1.343 (4) | C12—C13 | 1.490 (4) |
| C2—C14 | 1.420 (5) | C15—C16 | 1.383 (4) |
| C2—C3 | 1.522 (4) | C15—C20 | 1.393 (4) |
| C3—C4 | 1.510 (4) | C16—C17 | 1.387 (4) |
| C3—C15 | 1.524 (4) | C17—C18 | 1.370 (4) |
| C3—H3 | 0.9800 | C17—H17 | 0.9300 |
| C4—C13 | 1.335 (4) | C18—C19 | 1.373 (4) |
| C4—C5 | 1.470 (4) | C18—H18 | 0.9300 |
| C5—C6 | 1.487 (4) | C19—C20 | 1.383 (4) |
| C6—C7 | 1.380 (4) | C19—H19 | 0.9300 |
| C6—C11 | 1.396 (4) | C20—H20 | 0.9300 |
| C13—O1—C1 | 117.4 (2) | C8—C9—H9 | 119.7 |
| C1—N1—H1A | 120.0 | C9—C10—C11 | 120.0 (3) |
| C1—N1—H1B | 120.0 | C9—C10—H10 | 120.0 |
| H1A—N1—H1B | 120.0 | C11—C10—H10 | 120.0 |
| N1—C1—C2 | 127.8 (3) | C10—C11—C6 | 119.6 (3) |
| N1—C1—O1 | 110.1 (3) | C10—C11—C12 | 120.2 (3) |
| C2—C1—O1 | 122.1 (3) | C6—C11—C12 | 120.2 (3) |
| C1—C2—C14 | 120.4 (3) | O3—C12—C11 | 122.6 (3) |
| C1—C2—C3 | 122.9 (3) | O3—C12—C13 | 120.7 (3) |
| C14—C2—C3 | 116.6 (3) | C11—C12—C13 | 116.8 (3) |
| C4—C3—C2 | 108.4 (2) | C4—C13—O1 | 124.6 (3) |
| C4—C3—C15 | 114.8 (2) | C4—C13—C12 | 123.5 (3) |
| C2—C3—C15 | 113.2 (3) | O1—C13—C12 | 111.9 (3) |
| C4—C3—H3 | 106.6 | N2—C14—C2 | 177.6 (4) |
| C2—C3—H3 | 106.6 | C16—C15—C20 | 116.6 (3) |
| C15—C3—H3 | 106.6 | C16—C15—C3 | 125.4 (3) |
| C13—C4—C5 | 120.3 (3) | C20—C15—C3 | 118.0 (3) |
| C13—C4—C3 | 121.8 (3) | C15—C16—C17 | 122.3 (3) |
| C5—C4—C3 | 117.8 (3) | C15—C16—Cl1 | 120.9 (2) |
| O2—C5—C4 | 119.6 (3) | C17—C16—Cl1 | 116.8 (3) |
| O2—C5—C6 | 121.8 (3) | C18—C17—C16 | 119.4 (3) |
| C4—C5—C6 | 118.6 (3) | C18—C17—H17 | 120.3 |
| C7—C6—C11 | 119.7 (3) | C16—C17—H17 | 120.3 |
| C7—C6—C5 | 119.8 (3) | C17—C18—C19 | 120.1 (3) |
| C11—C6—C5 | 120.6 (3) | C17—C18—H18 | 120.0 |
| C8—C7—C6 | 120.2 (3) | C19—C18—H18 | 120.0 |
| C8—C7—H7 | 119.9 | C18—C19—C20 | 119.9 (3) |
| C6—C7—H7 | 119.9 | C18—C19—H19 | 120.0 |
| C9—C8—C7 | 120.0 (4) | C20—C19—H19 | 120.0 |
| C9—C8—H8 | 120.0 | C19—C20—C15 | 121.6 (3) |
| C7—C8—H8 | 120.0 | C19—C20—H20 | 119.2 |
| C10—C9—C8 | 120.5 (4) | C15—C20—H20 | 119.2 |
| C10—C9—H9 | 119.7 | ||
| C13—O1—C1—N1 | 174.8 (2) | C7—C6—C11—C12 | −178.1 (3) |
| C13—O1—C1—C2 | −3.9 (4) | C5—C6—C11—C12 | 2.1 (4) |
| N1—C1—C2—C14 | −5.9 (6) | C10—C11—C12—O3 | −1.4 (5) |
| O1—C1—C2—C14 | 172.6 (3) | C6—C11—C12—O3 | 177.0 (3) |
| N1—C1—C2—C3 | 169.9 (3) | C10—C11—C12—C13 | 179.9 (3) |
| O1—C1—C2—C3 | −11.5 (5) | C6—C11—C12—C13 | −1.7 (4) |
| C1—C2—C3—C4 | 18.2 (4) | C5—C4—C13—O1 | −179.1 (3) |
| C14—C2—C3—C4 | −165.8 (3) | C3—C4—C13—O1 | −2.0 (5) |
| C1—C2—C3—C15 | −110.3 (4) | C5—C4—C13—C12 | 2.0 (5) |
| C14—C2—C3—C15 | 65.6 (4) | C3—C4—C13—C12 | 179.1 (3) |
| C2—C3—C4—C13 | −11.5 (4) | C1—O1—C13—C4 | 11.0 (4) |
| C15—C3—C4—C13 | 116.1 (3) | C1—O1—C13—C12 | −170.1 (3) |
| C2—C3—C4—C5 | 165.6 (3) | O3—C12—C13—C4 | −179.1 (3) |
| C15—C3—C4—C5 | −66.7 (3) | C11—C12—C13—C4 | −0.4 (4) |
| C13—C4—C5—O2 | 178.4 (3) | O3—C12—C13—O1 | 1.9 (4) |
| C3—C4—C5—O2 | 1.1 (4) | C11—C12—C13—O1 | −179.4 (2) |
| C13—C4—C5—C6 | −1.6 (4) | C4—C3—C15—C16 | −57.8 (4) |
| C3—C4—C5—C6 | −178.8 (3) | C2—C3—C15—C16 | 67.4 (4) |
| O2—C5—C6—C7 | −0.2 (5) | C4—C3—C15—C20 | 124.2 (3) |
| C4—C5—C6—C7 | 179.7 (3) | C2—C3—C15—C20 | −110.6 (3) |
| O2—C5—C6—C11 | 179.5 (3) | C20—C15—C16—C17 | −1.4 (5) |
| C4—C5—C6—C11 | −0.6 (4) | C3—C15—C16—C17 | −179.4 (3) |
| C11—C6—C7—C8 | 0.7 (5) | C20—C15—C16—Cl1 | 178.3 (2) |
| C5—C6—C7—C8 | −179.5 (3) | C3—C15—C16—Cl1 | 0.2 (4) |
| C6—C7—C8—C9 | −1.4 (5) | C15—C16—C17—C18 | 0.8 (5) |
| C7—C8—C9—C10 | 1.1 (5) | Cl1—C16—C17—C18 | −178.8 (3) |
| C8—C9—C10—C11 | −0.1 (5) | C16—C17—C18—C19 | 0.4 (5) |
| C9—C10—C11—C6 | −0.6 (5) | C17—C18—C19—C20 | −1.0 (5) |
| C9—C10—C11—C12 | 177.8 (3) | C18—C19—C20—C15 | 0.4 (5) |
| C7—C6—C11—C10 | 0.3 (5) | C16—C15—C20—C19 | 0.8 (5) |
| C5—C6—C11—C10 | −179.5 (3) | C3—C15—C20—C19 | 179.0 (3) |
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1A···N2i | 0.86 | 2.26 | 3.080 (4) | 159 |
| N1—H1B···O3ii | 0.86 | 2.22 | 2.889 (3) | 134 |
| Symmetry codes: (i) −x, −y+1, −z+2; (ii) −x, −y+1, −z+1. |
| D—H···A | D—H | H···A | D···A | D—H···A |
| N1—H1A···N2i | 0.86 | 2.26 | 3.080 (4) | 159 |
| N1—H1B···O3ii | 0.86 | 2.22 | 2.889 (3) | 134 |
| Symmetry codes: (i) −x, −y+1, −z+2; (ii) −x, −y+1, −z+1. |
We thank the National Natural Science Foundation of China (grant No. 20672090) and the Natural Science Foundation of Jiangsu Province (grant No. BK2006033) for support.
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Pyrans and their derivatives are important compounds, which are found to possess antibacterial (El-Agrody et al., 2000) and antitumor (Mohr et al., 1975) activities and antiallergic (Banzatti et al., 1984; Hatakeyama et al., 1988) and hypotensive (Tandon et al., 1991) effects. Compounds of 1,4-naphthoquinone series possess potent and versatile biological activities, such as antiallergic and anticancer activities (Kongkathip et al., 2003). For these reasons, 1,4-pyranonaphthoquinone derivatives possessing both pyran ring and 1,4-naphthoquinone motif are strongly desired. We report herein the crystal structure of the title compound.
In the molecule of the title compound (Fig. 1) the bond lengths (Allen et al., 1987) and angles are within normal ranges. Rings B (C4-C6/C11-C13), C (C6-C11) and D (C15-C20) are, of course, planar and the dihedral angles between them are B/C = 1.33 (3)°, B/D = 83.55 (3)° and C/D = 82.65 (3)°. So, rings B and C are nearly coplanar. Ring A (O1/C1-C4/C13) is not planar, having total puckering amplitude, QT, of 0.172 (3) and flattened-boat conformation [φ = -22.99 (3)° and θ = 105.077 (4)°] (Cremer & Pople, 1975).
In the crystal structure, intermolecular N-H···N and N-H···O hydrogen bonds (Table 1) generate edge-fused R22(12) and R22(14) ring motifs (Fig. 2) (Bernstein et al., 1995). The hydrogen bonded motifs are linked to each other to form a three dimensional network, in which they may be effective in the stabilization of the structure. The π-π contact between the chlorophenyl rings, Cg4—Cg4i [symmetry code: (i) -x, -y, 2 - z, where Cg4 is centroid of the ring D (C15-C20)] may further stabilize the structure, with centroid-centroid distance of 3.879 (3) Å.