Acta Cryst. (2009). E65, m413-m414 [ doi:10.1107/S1600536809009180 ]
2O1,O1')bis[2-(2-pyridyl)-1H-benzimidazole-
2N2,N3]zinc(II) monohydrateIn the title compound, [Zn(C8H4O7S)(C12H9N3)2]·H2O, the ZnII atom has a distorted octahedral coordination geometry, defined by four N atoms from two 2-(2-pyridyl)-1H-benzimidazole ligands and two O atoms from a deprotonated carboxylate group of the 3-carboxy-5-sulfonatobenzoate ligand. In the crystal structure, the complex molecules are linked into a three-dimensional network by intermolecular O-H
O and N-H
O hydrogen bonds, and
-
stacking interactions with centroid-centroid separations of 3.758 (2) and 3.597 (1) Å.
A mixture of Zn(NO3)2.6H2O (0.092 g, 0.3 mmol), NaH2sipa (0.053 g, 0.2 mmol), 2-pbim (0.039 g, 0.2 mmol) and H2O (10 ml) was placed in a 18 ml Teflon-lined Parr acid digestion bomb. The pH value of the reaction mixture was adjusted to ca 6.0 with 10% sodium hydroxide. The mixture was then heated for 3 d at 433 K under autogeneous pressure. Slow cooling of the reaction mixture to room temperature gave colorless prism crystals (yield: ca 78% based on Zn)
The water H atoms were located in a difference Fourier map and fixed in refinement with O—H = 0.82 Å and Uiso(H) = 1.5Ueq(O). Other H atoms were placed geometrically and refined as riding, with C—H = 0.93, O—H = 0.82 and N—H = 0.86 Å and with Uiso(H) = 1.5Ueq(O) or Uiso(H) = 1.2Ueq(C, N).
Data collection: CrystalClear (Rigaku, 2002); cell refinement: CrystalClear (Rigaku, 2002); data reduction: CrystalClear (Rigaku, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008) and DIAMOND (Brandenburg, 1999); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).
| [Zn(C8H4O7S)(C12H9N3)2]·H2O | Z = 2 |
| Mr = 718.00 | F(000) = 736 |
| Triclinic, P1 | Dx = 1.545 Mg m−3 |
| Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
| a = 11.086 (4) Å | Cell parameters from 3438 reflections |
| b = 12.695 (5) Å | θ = 2.4–27.5° |
| c = 13.347 (4) Å | µ = 0.93 mm−1 |
| α = 63.187 (10)° | T = 293 K |
| β = 68.376 (13)° | Prism, colorless |
| γ = 87.122 (17)° | 0.14 × 0.11 × 0.08 mm |
| V = 1543.2 (10) Å3 |
| Rigaku Mercury CCD diffractometer | 6935 independent reflections |
| Radiation source: fine-focus sealed tube | 3857 reflections with I > 2σ(I) |
| graphite | Rint = 0.035 |
| Detector resolution: 14.6306 pixels mm-1 | θmax = 27.4°, θmin = 2.4° |
| ω scans | h = −13→14 |
| Absorption correction: multi-scan (CrystalClear; Rigaku, 2002) | k = −16→16 |
| Tmin = 0.843, Tmax = 0.929 | l = −14→17 |
| 12166 measured reflections |
| Refinement on F2 | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| R[F2 > 2σ(F2)] = 0.064 | Hydrogen site location: inferred from neighbouring sites |
| wR(F2) = 0.179 | H-atom parameters constrained |
| S = 0.99 | w = 1/[σ2(Fo2) + (0.0855P)2] where P = (Fo2 + 2Fc2)/3 |
| 6935 reflections | (Δ/σ)max < 0.001 |
| 434 parameters | Δρmax = 0.89 e Å−3 |
| 0 restraints | Δρmin = −0.43 e Å−3 |
| [Zn(C8H4O7S)(C12H9N3)2]·H2O | γ = 87.122 (17)° |
| Mr = 718.00 | V = 1543.2 (10) Å3 |
| Triclinic, P1 | Z = 2 |
| a = 11.086 (4) Å | Mo Kα radiation |
| b = 12.695 (5) Å | µ = 0.93 mm−1 |
| c = 13.347 (4) Å | T = 293 K |
| α = 63.187 (10)° | 0.14 × 0.11 × 0.08 mm |
| β = 68.376 (13)° |
| Rigaku Mercury CCD diffractometer | 6935 independent reflections |
| Absorption correction: multi-scan (CrystalClear; Rigaku, 2002) | 3857 reflections with I > 2σ(I) |
| Tmin = 0.843, Tmax = 0.929 | Rint = 0.035 |
| 12166 measured reflections | θmax = 27.4° |
| R[F2 > 2σ(F2)] = 0.064 | H-atom parameters constrained |
| wR(F2) = 0.179 | Δρmax = 0.89 e Å−3 |
| S = 0.99 | Δρmin = −0.43 e Å−3 |
| 6935 reflections | Absolute structure: ? |
| 434 parameters | Flack parameter: ? |
| 0 restraints | Rogers parameter: ? |
| x | y | z | Uiso*/Ueq | ||
| Zn1 | 0.29944 (5) | 0.17840 (5) | 0.78119 (5) | 0.0450 (2) | |
| S1 | 0.04872 (11) | 0.43789 (11) | 1.21208 (10) | 0.0462 (3) | |
| N1 | 0.1432 (4) | 0.0898 (4) | 0.7857 (3) | 0.0502 (10) | |
| N2 | 0.0072 (4) | −0.0749 (4) | 0.8695 (4) | 0.0621 (11) | |
| H2B | −0.0332 | −0.1461 | 0.9201 | 0.075* | |
| N3 | 0.2645 (4) | −0.0040 (4) | 0.9412 (4) | 0.0541 (10) | |
| N4 | 0.4499 (3) | 0.1749 (3) | 0.6348 (3) | 0.0498 (10) | |
| N5 | 0.5526 (4) | 0.2558 (3) | 0.4336 (3) | 0.0522 (10) | |
| H5B | 0.5771 | 0.3064 | 0.3577 | 0.063* | |
| N6 | 0.3118 (4) | 0.3556 (4) | 0.6299 (4) | 0.0507 (10) | |
| C1 | 0.0720 (5) | 0.1113 (5) | 0.7172 (4) | 0.0524 (12) | |
| C2 | 0.0720 (5) | 0.2091 (4) | 0.6132 (4) | 0.0537 (12) | |
| H2A | 0.1273 | 0.2798 | 0.5780 | 0.064* | |
| C3 | −0.0115 (6) | 0.1981 (6) | 0.5644 (6) | 0.0768 (17) | |
| H3A | −0.0120 | 0.2631 | 0.4942 | 0.092* | |
| C4 | −0.0948 (8) | 0.0964 (7) | 0.6132 (7) | 0.107 (2) | |
| H4A | −0.1491 | 0.0938 | 0.5751 | 0.128* | |
| C5 | −0.0999 (7) | −0.0010 (6) | 0.7164 (6) | 0.094 (2) | |
| H5A | −0.1585 | −0.0693 | 0.7506 | 0.113* | |
| C6 | −0.0172 (5) | 0.0040 (5) | 0.7683 (4) | 0.0533 (12) | |
| C7 | 0.1051 (4) | −0.0216 (4) | 0.8756 (4) | 0.0337 (9) | |
| C8 | 0.1661 (4) | −0.0747 (4) | 0.9639 (4) | 0.0467 (11) | |
| C9 | 0.3292 (5) | −0.0428 (5) | 1.0183 (5) | 0.0565 (13) | |
| H9A | 0.3984 | 0.0081 | 1.0031 | 0.068* | |
| C10 | 0.2964 (6) | −0.1531 (5) | 1.1166 (5) | 0.0701 (16) | |
| H10A | 0.3428 | −0.1773 | 1.1670 | 0.084* | |
| C11 | 0.1900 (6) | −0.2302 (5) | 1.1404 (5) | 0.0663 (15) | |
| H11A | 0.1643 | −0.3067 | 1.2057 | 0.080* | |
| C12 | 0.1258 (4) | −0.1844 (4) | 1.0597 (4) | 0.0489 (11) | |
| H12A | 0.0539 | −0.2308 | 1.0726 | 0.059* | |
| C13 | 0.5302 (4) | 0.0978 (4) | 0.6075 (5) | 0.0496 (11) | |
| C14 | 0.5504 (5) | −0.0146 (4) | 0.6844 (4) | 0.0529 (12) | |
| H14A | 0.5075 | −0.0499 | 0.7687 | 0.063* | |
| C15 | 0.6384 (5) | −0.0690 (4) | 0.6264 (5) | 0.0598 (14) | |
| H15A | 0.6554 | −0.1435 | 0.6742 | 0.072* | |
| C16 | 0.7031 (5) | −0.0199 (5) | 0.5016 (5) | 0.0694 (16) | |
| H16A | 0.7606 | −0.0624 | 0.4684 | 0.083* | |
| C17 | 0.6843 (5) | 0.0891 (5) | 0.4266 (5) | 0.0623 (14) | |
| H17A | 0.7289 | 0.1229 | 0.3425 | 0.075* | |
| C18 | 0.5970 (4) | 0.1477 (4) | 0.4791 (4) | 0.0408 (10) | |
| C19 | 0.4634 (4) | 0.2702 (4) | 0.5279 (3) | 0.0365 (9) | |
| C20 | 0.3960 (4) | 0.3701 (4) | 0.5214 (4) | 0.0494 (11) | |
| C21 | 0.2430 (4) | 0.4475 (5) | 0.6353 (5) | 0.0545 (13) | |
| H21A | 0.1845 | 0.4371 | 0.7110 | 0.065* | |
| C22 | 0.2562 (5) | 0.5530 (5) | 0.5352 (5) | 0.0650 (15) | |
| H22A | 0.2092 | 0.6138 | 0.5421 | 0.078* | |
| C23 | 0.3456 (5) | 0.5667 (5) | 0.4189 (5) | 0.0713 (16) | |
| H23A | 0.3580 | 0.6363 | 0.3475 | 0.086* | |
| C24 | 0.4123 (5) | 0.4727 (4) | 0.4171 (4) | 0.0520 (12) | |
| H24A | 0.4701 | 0.4792 | 0.3427 | 0.062* | |
| C25 | 0.3076 (4) | 0.3139 (3) | 0.9990 (4) | 0.0342 (9) | |
| C26 | 0.4187 (4) | 0.3155 (4) | 1.0245 (4) | 0.0365 (9) | |
| H26A | 0.4935 | 0.2897 | 0.9866 | 0.044* | |
| C27 | 0.4184 (4) | 0.3552 (3) | 1.1057 (3) | 0.0348 (9) | |
| C28 | 0.3057 (4) | 0.3945 (4) | 1.1619 (3) | 0.0385 (10) | |
| H28A | 0.3050 | 0.4219 | 1.2160 | 0.046* | |
| C29 | 0.1968 (4) | 0.3927 (3) | 1.1374 (4) | 0.0374 (9) | |
| C30 | 0.1967 (4) | 0.3535 (3) | 1.0558 (4) | 0.0373 (9) | |
| H30A | 0.1223 | 0.3536 | 1.0391 | 0.045* | |
| C31 | 0.3042 (4) | 0.2663 (4) | 0.9162 (4) | 0.0378 (9) | |
| C32 | 0.5345 (4) | 0.3540 (4) | 1.1378 (4) | 0.0370 (9) | |
| O1 | 0.1971 (3) | 0.2476 (3) | 0.9116 (3) | 0.0423 (7) | |
| O1W | 0.8425 (3) | 0.3154 (3) | 1.1201 (3) | 0.0623 (9) | |
| H1WA | 0.8913 | 0.3655 | 1.0516 | 0.093* | |
| H1WB | 0.8553 | 0.3320 | 1.1686 | 0.093* | |
| O2 | 0.4098 (3) | 0.2450 (3) | 0.8526 (3) | 0.0477 (8) | |
| O3 | 0.5390 (3) | 0.3947 (3) | 1.2030 (3) | 0.0506 (8) | |
| O4 | 0.6277 (3) | 0.3028 (3) | 1.0909 (3) | 0.0538 (9) | |
| H4B | 0.6863 | 0.2999 | 1.1152 | 0.081* | |
| O5 | 0.0764 (3) | 0.4722 (3) | 1.2907 (3) | 0.0648 (10) | |
| O6 | −0.0514 (3) | 0.3350 (3) | 1.2746 (3) | 0.0621 (9) | |
| O7 | 0.0208 (3) | 0.5357 (3) | 1.1155 (3) | 0.0687 (11) |
| U11 | U22 | U33 | U12 | U13 | U23 | |
| Zn1 | 0.0400 (3) | 0.0546 (3) | 0.0383 (3) | −0.0070 (2) | −0.0047 (2) | −0.0269 (3) |
| S1 | 0.0416 (6) | 0.0549 (7) | 0.0433 (6) | 0.0136 (5) | −0.0115 (5) | −0.0285 (6) |
| N1 | 0.044 (2) | 0.060 (2) | 0.048 (2) | 0.0038 (19) | −0.0146 (19) | −0.028 (2) |
| N2 | 0.055 (2) | 0.059 (3) | 0.062 (3) | −0.009 (2) | −0.020 (2) | −0.020 (2) |
| N3 | 0.045 (2) | 0.064 (3) | 0.062 (3) | 0.011 (2) | −0.018 (2) | −0.039 (2) |
| N4 | 0.040 (2) | 0.061 (2) | 0.046 (2) | −0.0001 (19) | −0.0109 (18) | −0.027 (2) |
| N5 | 0.063 (2) | 0.047 (2) | 0.043 (2) | 0.0088 (19) | −0.0158 (19) | −0.0215 (19) |
| N6 | 0.045 (2) | 0.065 (3) | 0.052 (2) | 0.0038 (19) | −0.0195 (19) | −0.035 (2) |
| C1 | 0.047 (3) | 0.077 (3) | 0.041 (3) | 0.015 (3) | −0.018 (2) | −0.034 (3) |
| C2 | 0.056 (3) | 0.056 (3) | 0.043 (3) | 0.001 (2) | −0.023 (2) | −0.014 (2) |
| C3 | 0.075 (4) | 0.083 (4) | 0.066 (4) | −0.002 (3) | −0.038 (3) | −0.021 (3) |
| C4 | 0.118 (6) | 0.119 (6) | 0.085 (5) | −0.011 (5) | −0.061 (5) | −0.030 (5) |
| C5 | 0.104 (5) | 0.084 (5) | 0.099 (5) | −0.008 (4) | −0.064 (4) | −0.025 (4) |
| C6 | 0.056 (3) | 0.059 (3) | 0.043 (3) | 0.004 (2) | −0.027 (2) | −0.015 (2) |
| C7 | 0.031 (2) | 0.039 (2) | 0.033 (2) | −0.0007 (17) | −0.0100 (17) | −0.0193 (19) |
| C8 | 0.043 (3) | 0.050 (3) | 0.046 (3) | 0.014 (2) | −0.010 (2) | −0.028 (2) |
| C9 | 0.050 (3) | 0.063 (3) | 0.069 (3) | 0.016 (2) | −0.040 (3) | −0.027 (3) |
| C10 | 0.068 (4) | 0.071 (4) | 0.072 (4) | 0.027 (3) | −0.043 (3) | −0.023 (3) |
| C11 | 0.081 (4) | 0.051 (3) | 0.058 (3) | 0.022 (3) | −0.023 (3) | −0.023 (3) |
| C12 | 0.039 (2) | 0.059 (3) | 0.051 (3) | 0.009 (2) | −0.016 (2) | −0.029 (3) |
| C13 | 0.043 (3) | 0.053 (3) | 0.061 (3) | 0.002 (2) | −0.019 (2) | −0.033 (3) |
| C14 | 0.062 (3) | 0.041 (2) | 0.046 (3) | 0.005 (2) | −0.022 (2) | −0.011 (2) |
| C15 | 0.066 (3) | 0.048 (3) | 0.054 (3) | 0.009 (3) | −0.022 (3) | −0.016 (3) |
| C16 | 0.067 (3) | 0.065 (3) | 0.075 (4) | 0.019 (3) | −0.022 (3) | −0.036 (3) |
| C17 | 0.064 (3) | 0.062 (3) | 0.065 (3) | 0.016 (3) | −0.017 (3) | −0.040 (3) |
| C18 | 0.042 (2) | 0.044 (2) | 0.040 (2) | 0.007 (2) | −0.017 (2) | −0.022 (2) |
| C19 | 0.036 (2) | 0.045 (2) | 0.029 (2) | −0.0028 (18) | −0.0073 (17) | −0.0207 (19) |
| C20 | 0.048 (3) | 0.058 (3) | 0.051 (3) | 0.007 (2) | −0.020 (2) | −0.031 (3) |
| C21 | 0.045 (3) | 0.068 (3) | 0.052 (3) | 0.022 (2) | −0.015 (2) | −0.034 (3) |
| C22 | 0.049 (3) | 0.068 (3) | 0.069 (4) | 0.011 (3) | −0.019 (3) | −0.027 (3) |
| C23 | 0.072 (4) | 0.060 (3) | 0.072 (4) | 0.011 (3) | −0.032 (3) | −0.019 (3) |
| C24 | 0.050 (3) | 0.064 (3) | 0.051 (3) | 0.015 (2) | −0.023 (2) | −0.032 (3) |
| C25 | 0.034 (2) | 0.035 (2) | 0.035 (2) | 0.0031 (17) | −0.0150 (18) | −0.0161 (18) |
| C26 | 0.035 (2) | 0.041 (2) | 0.034 (2) | 0.0098 (18) | −0.0120 (18) | −0.0193 (19) |
| C27 | 0.038 (2) | 0.037 (2) | 0.030 (2) | 0.0065 (18) | −0.0163 (18) | −0.0146 (18) |
| C28 | 0.051 (3) | 0.041 (2) | 0.031 (2) | 0.013 (2) | −0.0198 (19) | −0.0198 (19) |
| C29 | 0.039 (2) | 0.037 (2) | 0.036 (2) | 0.0081 (18) | −0.0145 (19) | −0.0169 (19) |
| C30 | 0.033 (2) | 0.039 (2) | 0.042 (2) | 0.0064 (18) | −0.0157 (19) | −0.0194 (19) |
| C31 | 0.043 (2) | 0.036 (2) | 0.031 (2) | 0.0025 (19) | −0.0127 (19) | −0.0139 (18) |
| C32 | 0.039 (2) | 0.042 (2) | 0.030 (2) | 0.0044 (19) | −0.0171 (19) | −0.0148 (19) |
| O1 | 0.0378 (16) | 0.0528 (18) | 0.0429 (17) | 0.0016 (14) | −0.0164 (13) | −0.0265 (15) |
| O1W | 0.0470 (19) | 0.079 (2) | 0.065 (2) | 0.0038 (17) | −0.0263 (17) | −0.033 (2) |
| O2 | 0.0410 (17) | 0.066 (2) | 0.0487 (18) | 0.0060 (15) | −0.0128 (14) | −0.0399 (17) |
| O3 | 0.061 (2) | 0.063 (2) | 0.0505 (19) | 0.0203 (17) | −0.0378 (17) | −0.0336 (17) |
| O4 | 0.0399 (17) | 0.081 (2) | 0.069 (2) | 0.0196 (17) | −0.0302 (17) | −0.052 (2) |
| O5 | 0.059 (2) | 0.090 (3) | 0.069 (2) | 0.0218 (19) | −0.0220 (18) | −0.060 (2) |
| O6 | 0.0487 (19) | 0.070 (2) | 0.058 (2) | −0.0001 (17) | −0.0080 (16) | −0.0316 (19) |
| O7 | 0.064 (2) | 0.073 (2) | 0.055 (2) | 0.0364 (19) | −0.0182 (18) | −0.0244 (19) |
| Zn1—N1 | 2.080 (4) | C11—C12 | 1.401 (7) |
| Zn1—N3 | 2.257 (4) | C11—H11A | 0.9300 |
| Zn1—N4 | 2.067 (4) | C12—H12A | 0.9300 |
| Zn1—N6 | 2.210 (4) | C13—C14 | 1.398 (6) |
| Zn1—O1 | 2.216 (3) | C13—C18 | 1.421 (6) |
| Zn1—O2 | 2.193 (3) | C14—C15 | 1.373 (6) |
| S1—O5 | 1.431 (4) | C14—H14A | 0.9300 |
| S1—O7 | 1.453 (3) | C15—C16 | 1.381 (7) |
| S1—O6 | 1.453 (4) | C15—H15A | 0.9300 |
| S1—C29 | 1.798 (4) | C16—C17 | 1.355 (7) |
| N1—C7 | 1.332 (5) | C16—H16A | 0.9300 |
| N1—C1 | 1.348 (6) | C17—C18 | 1.371 (6) |
| N2—C7 | 1.353 (5) | C17—H17A | 0.9300 |
| N2—C6 | 1.387 (6) | C19—C20 | 1.423 (6) |
| N2—H2B | 0.8600 | C20—C24 | 1.368 (7) |
| N3—C8 | 1.303 (6) | C21—C22 | 1.364 (7) |
| N3—C9 | 1.366 (6) | C21—H21A | 0.9300 |
| N4—C19 | 1.351 (5) | C22—C23 | 1.437 (8) |
| N4—C13 | 1.371 (6) | C22—H22A | 0.9300 |
| N5—C19 | 1.367 (5) | C23—C24 | 1.376 (7) |
| N5—C18 | 1.377 (5) | C23—H23A | 0.9300 |
| N5—H5B | 0.8600 | C24—H24A | 0.9300 |
| N6—C20 | 1.335 (6) | C25—C30 | 1.390 (5) |
| N6—C21 | 1.377 (6) | C25—C26 | 1.397 (6) |
| C1—C2 | 1.384 (6) | C25—C31 | 1.490 (6) |
| C1—C6 | 1.449 (7) | C26—C27 | 1.384 (6) |
| C2—C3 | 1.356 (7) | C26—H26A | 0.9300 |
| C2—H2A | 0.9300 | C27—C28 | 1.399 (5) |
| C3—C4 | 1.364 (9) | C27—C32 | 1.497 (5) |
| C3—H3A | 0.9300 | C28—C29 | 1.367 (6) |
| C4—C5 | 1.357 (9) | C28—H28A | 0.9300 |
| C4—H4A | 0.9300 | C29—C30 | 1.386 (6) |
| C5—C6 | 1.355 (7) | C30—H30A | 0.9300 |
| C5—H5A | 0.9300 | C31—O1 | 1.251 (5) |
| C7—C8 | 1.458 (6) | C31—O2 | 1.267 (5) |
| C8—C12 | 1.345 (6) | C32—O3 | 1.211 (5) |
| C9—C10 | 1.362 (7) | C32—O4 | 1.306 (5) |
| C9—H9A | 0.9300 | O1W—H1WA | 0.82 |
| C10—C11 | 1.418 (8) | O1W—H1WB | 0.82 |
| C10—H10A | 0.9300 | O4—H4B | 0.82 |
| N4—Zn1—N1 | 100.37 (15) | C10—C11—H11A | 122.0 |
| N4—Zn1—O2 | 100.82 (13) | C8—C12—C11 | 121.3 (5) |
| N1—Zn1—O2 | 156.91 (13) | C8—C12—H12A | 119.4 |
| N4—Zn1—N6 | 77.61 (15) | C11—C12—H12A | 119.4 |
| N1—Zn1—N6 | 98.96 (15) | N4—C13—C14 | 130.1 (5) |
| O2—Zn1—N6 | 94.45 (13) | N4—C13—C18 | 109.4 (4) |
| N4—Zn1—O1 | 155.82 (14) | C14—C13—C18 | 120.5 (4) |
| N1—Zn1—O1 | 101.58 (13) | C15—C14—C13 | 115.1 (4) |
| O2—Zn1—O1 | 59.76 (10) | C15—C14—H14A | 122.4 |
| N6—Zn1—O1 | 89.04 (13) | C13—C14—H14A | 122.4 |
| N4—Zn1—N3 | 106.43 (14) | C14—C15—C16 | 124.1 (5) |
| N1—Zn1—N3 | 76.34 (16) | C14—C15—H15A | 117.9 |
| O2—Zn1—N3 | 88.94 (14) | C16—C15—H15A | 117.9 |
| N6—Zn1—N3 | 174.19 (13) | C17—C16—C15 | 121.0 (5) |
| O1—Zn1—N3 | 88.58 (13) | C17—C16—H16A | 119.5 |
| O5—S1—O7 | 113.4 (2) | C15—C16—H16A | 119.5 |
| O5—S1—O6 | 114.6 (2) | C16—C17—C18 | 117.6 (5) |
| O7—S1—O6 | 110.6 (2) | C16—C17—H17A | 121.2 |
| O5—S1—C29 | 106.1 (2) | C18—C17—H17A | 121.2 |
| O7—S1—C29 | 105.90 (19) | C17—C18—N5 | 133.7 (4) |
| O6—S1—C29 | 105.4 (2) | C17—C18—C13 | 121.7 (4) |
| C7—N1—C1 | 108.7 (4) | N5—C18—C13 | 104.6 (4) |
| C7—N1—Zn1 | 113.8 (3) | N4—C19—N5 | 109.7 (4) |
| C1—N1—Zn1 | 137.3 (4) | N4—C19—C20 | 122.6 (4) |
| C7—N2—C6 | 108.8 (4) | N5—C19—C20 | 127.7 (4) |
| C7—N2—H2B | 125.6 | N6—C20—C24 | 121.2 (4) |
| C6—N2—H2B | 125.6 | N6—C20—C19 | 113.3 (4) |
| C8—N3—C9 | 118.6 (4) | C24—C20—C19 | 125.5 (4) |
| C8—N3—Zn1 | 114.3 (3) | C22—C21—N6 | 123.3 (4) |
| C9—N3—Zn1 | 127.0 (4) | C22—C21—H21A | 118.3 |
| C19—N4—C13 | 107.0 (4) | N6—C21—H21A | 118.3 |
| C19—N4—Zn1 | 112.3 (3) | C21—C22—C23 | 117.5 (5) |
| C13—N4—Zn1 | 139.7 (3) | C21—C22—H22A | 121.2 |
| C19—N5—C18 | 109.3 (4) | C23—C22—H22A | 121.2 |
| C19—N5—H5B | 125.3 | C24—C23—C22 | 117.5 (5) |
| C18—N5—H5B | 125.3 | C24—C23—H23A | 121.3 |
| C20—N6—C21 | 118.5 (4) | C22—C23—H23A | 121.3 |
| C20—N6—Zn1 | 113.3 (3) | C20—C24—C23 | 121.9 (5) |
| C21—N6—Zn1 | 128.1 (3) | C20—C24—H24A | 119.0 |
| N1—C1—C2 | 133.3 (5) | C23—C24—H24A | 119.0 |
| N1—C1—C6 | 108.1 (4) | C30—C25—C26 | 119.0 (4) |
| C2—C1—C6 | 118.6 (4) | C30—C25—C31 | 119.7 (4) |
| C3—C2—C1 | 117.6 (5) | C26—C25—C31 | 121.3 (3) |
| C3—C2—H2A | 121.2 | C27—C26—C25 | 120.6 (4) |
| C1—C2—H2A | 121.2 | C27—C26—H26A | 119.7 |
| C2—C3—C4 | 123.3 (6) | C25—C26—H26A | 119.7 |
| C2—C3—H3A | 118.4 | C26—C27—C28 | 119.5 (4) |
| C4—C3—H3A | 118.4 | C26—C27—C32 | 121.7 (3) |
| C5—C4—C3 | 121.2 (6) | C28—C27—C32 | 118.8 (4) |
| C5—C4—H4A | 119.4 | C29—C28—C27 | 120.0 (4) |
| C3—C4—H4A | 119.4 | C29—C28—H28A | 120.0 |
| C6—C5—C4 | 118.3 (6) | C27—C28—H28A | 120.0 |
| C6—C5—H5A | 120.9 | C28—C29—C30 | 120.8 (4) |
| C4—C5—H5A | 120.9 | C28—C29—S1 | 121.1 (3) |
| C5—C6—N2 | 134.9 (5) | C30—C29—S1 | 118.2 (3) |
| C5—C6—C1 | 121.1 (5) | C29—C30—C25 | 120.2 (4) |
| N2—C6—C1 | 104.0 (4) | C29—C30—H30A | 119.9 |
| N1—C7—N2 | 110.4 (4) | C25—C30—H30A | 119.9 |
| N1—C7—C8 | 122.6 (4) | O1—C31—O2 | 121.4 (4) |
| N2—C7—C8 | 127.0 (4) | O1—C31—C25 | 119.3 (4) |
| N3—C8—C12 | 122.8 (5) | O2—C31—C25 | 119.3 (4) |
| N3—C8—C7 | 112.8 (4) | O1—C31—Zn1 | 61.3 (2) |
| C12—C8—C7 | 124.4 (5) | O2—C31—Zn1 | 60.2 (2) |
| C10—C9—N3 | 122.7 (5) | C25—C31—Zn1 | 178.0 (3) |
| C10—C9—H9A | 118.7 | O3—C32—O4 | 124.1 (4) |
| N3—C9—H9A | 118.7 | O3—C32—C27 | 122.6 (4) |
| C9—C10—C11 | 118.6 (5) | O4—C32—C27 | 113.3 (4) |
| C9—C10—H10A | 120.7 | C31—O1—Zn1 | 89.1 (2) |
| C11—C10—H10A | 120.7 | H1WA—O1W—H1WB | 106.3 |
| C12—C11—C10 | 116.1 (5) | C31—O2—Zn1 | 89.7 (3) |
| C12—C11—H11A | 122.0 | C32—O4—H4B | 109.5 |
| D—H···A | D—H | H···A | D···A | D—H···A |
| N2—H2B···O1i | 0.86 | 2.15 | 2.884 (5) | 143 |
| N5—H5B···O3ii | 0.86 | 2.05 | 2.833 (5) | 151 |
| O1W—H1WA···O7iii | 0.82 | 1.87 | 2.678 (5) | 167 |
| O1W—H1WB···O6iv | 0.82 | 2.05 | 2.825 (5) | 157 |
| O4—H4B···O1W | 0.82 | 1.78 | 2.575 (4) | 163 |
| Symmetry codes: (i) −x, −y, −z+2; (ii) x, y, z−1; (iii) −x+1, −y+1, −z+2; (iv) x+1, y, z. |
| Zn1—N1 | 2.080 (4) | Zn1—N6 | 2.210 (4) |
| Zn1—N3 | 2.257 (4) | Zn1—O1 | 2.216 (3) |
| Zn1—N4 | 2.067 (4) | Zn1—O2 | 2.193 (3) |
| D—H···A | D—H | H···A | D···A | D—H···A |
| N2—H2B···O1i | 0.86 | 2.15 | 2.884 (5) | 143 |
| N5—H5B···O3ii | 0.86 | 2.05 | 2.833 (5) | 151 |
| O1W—H1WA···O7iii | 0.82 | 1.87 | 2.678 (5) | 167 |
| O1W—H1WB···O6iv | 0.82 | 2.05 | 2.825 (5) | 157 |
| O4—H4B···O1W | 0.82 | 1.78 | 2.575 (4) | 163 |
| Symmetry codes: (i) −x, −y, −z+2; (ii) x, y, z−1; (iii) −x+1, −y+1, −z+2; (iv) x+1, y, z. |
This work was supported by the Natural Science Foundation of Fujian Province (grant Nos. 2006 F3141 and 2008 J0142).
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Increasing interest has been focused on crystal engineering of supramolecular architectures organized by coordinating covalent bonds or supramolecular contacts such as hydrogen bonding and π–π interactions (Xia et al., 2005). 5-Sulfoisophthalic acid (H3sipa), which exhibits variation in possible binding modes of the two carboxylate groups and the soft sulfonate group, and a strong tendency to form large, tightly bound metal cluster, has been demonstrated as a useful bridge ligand for the construction of supramolecular structures (Kulynych & Shimizu et al., 2002; Liu & Xu et al., 2005; Sun et al., 2003). On the other hand, 2-(2-pyridyl)-1H-benzimidazole (2-pbim) ligand presents multiple N-donor sites with the possibility of reversible protonation and deprotonation, and has the capacity to act as a donor or acceptor in the formation of multi-dimensional hydrogen bonded networks (Xia et al., 2006). We report here the crystal structure of the title compound, which contains both Hsipa and 2-pbim ligands.
As shown in Fig. 1, the title complex consists of one ZnII atom, two neutral 2-pbim ligands, one deprotonated Hsipa2- ligand and one uncoordinated water molecule. The ZnII atom is six-coordinated by four N atoms from two 2-pbim ligands and two O atoms from one carboxylate group of the Hsipa2- ligand, forming a distorted octahedral geometry (Table 1). The chelate rings A (Zn1, N1, C7, C8, N3), B (Zn1, N4, C19, C20, N6) and C (Zn1, O1, C31, O2) are oriented at dihedral angles of A/B = 84.1 (1)°, A/C = 87.8 (1)° and B/C = 82.4 (1)°. The two 2-pbim ligands bonded to the same Zn atom are nearly perpendicular to each other.
In the crystal structure, the mononuclear Zn complex molecules are linked by intermolecular O—H···O and N—H···O hydrogen bonds involving the water molecule, the imino groups, the carboxyl groups and the sulfonate group, forming a three-dimensional network (Fig. 2 and Table 2). The structure is further stabilized by π–π stacking interactions between the benzene rings of neighboring benzimidazole moieties containing N4 and N5 atoms, and between the pyridyl ring containing N3 atom and benzimidazole moiety containing N1 and N2 atoms, with centroid-to-centroid distances of 3.758 (2) and 3.597 (1) Å, respectively.