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Acta Cryst. (2009). E65, o1297    [ doi:10.1107/S1600536809017425 ]

5-[(4-Acetylphenyl)aminomethylene]-2,2-dimethyl-1,3-dioxane-4,6-dione

R. Li, Z.-Y. Ding, Y.-Q. Wei and J. Ding

Abstract top

In the title compound, C15H15NO5, the six-membered dioxane ring assumes an envelope conformation with the dimethyl substituted C atom as the flap atom. An intramolecular N-H...O interaction is also present. In the crystal structure the molecules are linked via C-H...O hydrogen bonds into supramolecular chains along the b axis.

Comment top

The 4(1H)quinolone structure plays an extremely important role in the field of pharmaceutical chemistry. These compounds have been used as precursors for anticancer agents, anti-malarial agents and reversible (H+/K+) ATPase inhibitors (Ruchelman et al., 2003). 5-Arylaminomethylene-2,2-dimethyl-1,3-dioxane-4,6-diones are the key intermediates which can be used to synthesize the 4(1H)quinolone derivatives by thermolysis (Cassis et al., 1985).

The molecular structure is shown in Fig. 1. The six membered dioxane ring assumes an envelope conformation. The imino group links with the adjacent O atom via O—H···O hydrogen bonding. In the crystal structure the molecules are linked via C—H···O hydrogen bonding into one dimensional supra-molecualr chain along the b axis (Table 1).

Related literature top

For the biological activity 4(1H)quinolone structures, see: Ruchelman et al. (2003). 5-Arylaminomethylene-2,2-dimethyl-1,3-dioxane-4,6-diones are key intermediates in the synthesis of 4(1H)quinolone derivatives by thermolysis (Cassis et al., 1985).

Experimental top

A methanol solution (50 ml) of Meldrum's acid (1.44 g, 0.01 mol) and methylorthoformate (1.27 g, 0.012 mol) was heated to reflux for 2 h, then the arylamine (1.35 g, 0.01 mol) was added into the above solution. The mixture was heated under reflux for another 8 h and then filtered. Single crystals were obtained from the filtrate after 2 d.

Refinement top

The imino H atom was located in a difference Fourier map and refined isotropically. Other H atoms were positioned geometrically with C—H = 0.93 (aromatic) or 0.96 Å (methyl), and refined using a riding model with Uiso(H) = 1.5Ueq(C) for methyl and 1.2Ueq(C) for the others.

Computing details top

Data collection: DIFRAC (Gabe & White, 1993); cell refinement: DIFRAC (Gabe & White, 1993); data reduction: NRCVAX (Gabe et al., 1989); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).

Figures top
[Figure 1] Fig. 1. The molecular structure of the title compound, with displacement ellipsoids drawn at the 30% probability level.
5-[(4-Acetylphenyl)aminomethylene]-2,2-dimethyl-1,3-dioxane-4,6-dione top
Crystal data top
C15H15NO5Z = 2
Mr = 289.28F000 = 304
Triclinic, P1Dx = 1.349 Mg m3
Hall symbol: -P 1Mo Kα radiation
λ = 0.71073 Å
a = 7.102 (3) ÅCell parameters from 25 reflections
b = 7.356 (4) Åθ = 4.4–7.4º
c = 13.856 (4) ŵ = 0.10 mm1
α = 82.79 (4)ºT = 292 K
β = 83.19 (4)ºBlock, colourless
γ = 86.03 (4)º0.44 × 0.36 × 0.32 mm
V = 712.0 (5) Å3
Data collection top
Enraf–Nonius CAD-4
diffractometer
Rint = 0.008
Radiation source: fine-focus sealed tubeθmax = 25.5º
Monochromator: graphiteθmin = 1.5º
T = 292 Kh = 8→8
ω/2θ scansk = 3→8
Absorption correction: nonel = 16→16
2894 measured reflections3 standard reflections
2621 independent reflections every 100 reflections
1399 reflections with I > 2σ(I) intensity decay: 1.8%
Refinement top
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.064H atoms treated by a mixture of
independent and constrained refinement
wR(F2) = 0.179  w = 1/[σ2(Fo2) + (0.0987P)2]
where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
2621 reflectionsΔρmax = 0.23 e Å3
197 parametersΔρmin = 0.34 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Crystal data top
C15H15NO5γ = 86.03 (4)º
Mr = 289.28V = 712.0 (5) Å3
Triclinic, P1Z = 2
a = 7.102 (3) ÅMo Kα
b = 7.356 (4) ŵ = 0.10 mm1
c = 13.856 (4) ÅT = 292 K
α = 82.79 (4)º0.44 × 0.36 × 0.32 mm
β = 83.19 (4)º
Data collection top
Enraf–Nonius CAD-4
diffractometer
Rint = 0.008
Absorption correction: none3 standard reflections
2894 measured reflections every 100 reflections
2621 independent reflections intensity decay: 1.8%
1399 reflections with I > 2σ(I)
Refinement top
R[F2 > 2σ(F2)] = 0.064197 parameters
wR(F2) = 0.179H atoms treated by a mixture of
independent and constrained refinement
S = 1.03Δρmax = 0.23 e Å3
2621 reflectionsΔρmin = 0.34 e Å3
Special details top

Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.

Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O10.4606 (3)0.5224 (2)0.87501 (13)0.0548 (6)
O20.4847 (3)0.3153 (3)0.75537 (13)0.0585 (6)
O30.5363 (3)0.8104 (3)0.83800 (15)0.0713 (7)
O40.5696 (3)0.4044 (3)0.60005 (14)0.0688 (7)
O50.9300 (3)1.4570 (3)0.25900 (17)0.0767 (7)
N10.6950 (3)0.7445 (3)0.54722 (17)0.0485 (6)
H1N0.674 (4)0.644 (5)0.528 (2)0.066 (9)*
C10.3511 (5)0.2250 (4)0.9154 (2)0.0677 (9)
H1A0.36050.22860.98360.101*
H1B0.36740.10030.90100.101*
H1C0.22840.27540.89990.101*
C20.6988 (5)0.2750 (5)0.8795 (2)0.0708 (9)
H2A0.78940.34720.83710.106*
H2B0.72360.14780.87060.106*
H2C0.70940.29100.94630.106*
C30.5022 (4)0.3356 (4)0.8554 (2)0.0504 (7)
C40.5331 (4)0.6609 (4)0.8097 (2)0.0503 (7)
C50.5861 (4)0.6195 (3)0.71100 (18)0.0440 (6)
C60.5512 (4)0.4421 (4)0.6835 (2)0.0486 (7)
C70.6522 (4)0.7568 (3)0.64119 (19)0.0443 (7)
H70.66810.86920.66250.053*
C80.7584 (4)0.8835 (4)0.47359 (19)0.0443 (7)
C90.8222 (4)0.8338 (4)0.3821 (2)0.0561 (8)
H90.82620.71130.37110.067*
C100.8804 (4)0.9674 (4)0.3063 (2)0.0562 (8)
H100.92330.93370.24470.067*
C110.8752 (4)1.1500 (4)0.3217 (2)0.0475 (7)
C120.8132 (4)1.1971 (4)0.4143 (2)0.0510 (7)
H120.81131.31920.42560.061*
C130.7541 (4)1.0661 (4)0.4903 (2)0.0491 (7)
H130.71181.09980.55210.059*
C140.9294 (4)1.2990 (4)0.2415 (2)0.0558 (8)
C150.9783 (5)1.2522 (5)0.1391 (2)0.0731 (10)
H15A1.00421.36220.09580.110*
H15B0.87351.19540.11950.110*
H15C1.08851.16900.13650.110*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O10.0800 (14)0.0361 (11)0.0476 (11)0.0014 (9)0.0018 (10)0.0097 (9)
O20.0936 (15)0.0361 (11)0.0467 (11)0.0137 (10)0.0013 (10)0.0087 (9)
O30.125 (2)0.0320 (11)0.0598 (12)0.0023 (11)0.0121 (12)0.0163 (9)
O40.1213 (19)0.0381 (11)0.0475 (12)0.0173 (12)0.0040 (11)0.0130 (9)
O50.0993 (18)0.0370 (13)0.0893 (17)0.0106 (11)0.0019 (13)0.0012 (11)
N10.0641 (16)0.0299 (13)0.0525 (15)0.0091 (11)0.0043 (12)0.0071 (11)
C10.087 (2)0.056 (2)0.0591 (19)0.0135 (17)0.0026 (17)0.0095 (16)
C20.078 (2)0.053 (2)0.078 (2)0.0051 (16)0.0068 (18)0.0021 (16)
C30.071 (2)0.0296 (14)0.0505 (16)0.0001 (13)0.0032 (14)0.0068 (12)
C40.0647 (19)0.0389 (16)0.0488 (16)0.0057 (13)0.0135 (14)0.0092 (13)
C50.0512 (16)0.0371 (15)0.0455 (15)0.0007 (12)0.0106 (13)0.0086 (12)
C60.0670 (19)0.0346 (15)0.0435 (16)0.0027 (13)0.0018 (13)0.0065 (12)
C70.0527 (16)0.0300 (14)0.0525 (17)0.0017 (12)0.0121 (13)0.0086 (12)
C80.0449 (16)0.0374 (15)0.0520 (16)0.0071 (12)0.0067 (12)0.0067 (12)
C90.069 (2)0.0416 (16)0.0597 (18)0.0133 (14)0.0005 (15)0.0137 (14)
C100.0639 (19)0.0526 (19)0.0525 (17)0.0094 (15)0.0036 (14)0.0140 (14)
C110.0434 (16)0.0431 (16)0.0548 (17)0.0042 (12)0.0029 (13)0.0029 (13)
C120.0608 (19)0.0312 (14)0.0611 (18)0.0040 (12)0.0069 (14)0.0048 (13)
C130.0588 (18)0.0377 (15)0.0518 (16)0.0021 (13)0.0048 (13)0.0129 (13)
C140.0464 (17)0.0531 (19)0.066 (2)0.0003 (14)0.0062 (14)0.0001 (15)
C150.083 (2)0.063 (2)0.065 (2)0.0021 (18)0.0077 (18)0.0072 (16)
Geometric parameters (Å, °) top
O1—C41.361 (3)C5—C71.374 (4)
O1—C31.438 (3)C5—C61.450 (4)
O2—C61.342 (3)C7—H70.9300
O2—C31.434 (3)C8—C91.380 (4)
O3—C41.216 (3)C8—C131.389 (4)
O4—C61.212 (3)C9—C101.390 (4)
O5—C141.217 (3)C9—H90.9300
N1—C71.315 (3)C10—C111.383 (4)
N1—C81.408 (3)C10—H100.9300
N1—H1N0.85 (3)C11—C121.384 (4)
C1—C31.498 (4)C11—C141.495 (4)
C1—H1A0.9600C12—C131.383 (4)
C1—H1B0.9600C12—H120.9300
C1—H1C0.9600C13—H130.9300
C2—C31.499 (4)C14—C151.497 (4)
C2—H2A0.9600C15—H15A0.9600
C2—H2B0.9600C15—H15B0.9600
C2—H2C0.9600C15—H15C0.9600
C4—C51.438 (3)
C4—O1—C3119.3 (2)O2—C6—C5117.1 (2)
C6—O2—C3120.1 (2)N1—C7—C5126.2 (2)
C7—N1—C8127.6 (2)N1—C7—H7116.9
C7—N1—H1N116 (2)C5—C7—H7116.9
C8—N1—H1N116 (2)C9—C8—C13120.2 (3)
C3—C1—H1A109.5C9—C8—N1117.8 (3)
C3—C1—H1B109.5C13—C8—N1122.0 (2)
H1A—C1—H1B109.5C8—C9—C10119.7 (3)
C3—C1—H1C109.5C8—C9—H9120.1
H1A—C1—H1C109.5C10—C9—H9120.1
H1B—C1—H1C109.5C11—C10—C9120.7 (3)
C3—C2—H2A109.5C11—C10—H10119.7
C3—C2—H2B109.5C9—C10—H10119.7
H2A—C2—H2B109.5C10—C11—C12118.8 (3)
C3—C2—H2C109.5C10—C11—C14122.5 (3)
H2A—C2—H2C109.5C12—C11—C14118.7 (3)
H2B—C2—H2C109.5C13—C12—C11121.3 (3)
O2—C3—O1111.4 (2)C13—C12—H12119.4
O2—C3—C1105.9 (2)C11—C12—H12119.4
O1—C3—C1106.4 (2)C12—C13—C8119.3 (3)
O2—C3—C2110.2 (2)C12—C13—H13120.4
O1—C3—C2109.4 (2)C8—C13—H13120.4
C1—C3—C2113.4 (3)O5—C14—C11120.4 (3)
O3—C4—O1117.5 (2)O5—C14—C15120.4 (3)
O3—C4—C5125.9 (3)C11—C14—C15119.2 (3)
O1—C4—C5116.5 (2)C14—C15—H15A109.5
C7—C5—C4118.8 (2)C14—C15—H15B109.5
C7—C5—C6120.4 (2)H15A—C15—H15B109.5
C4—C5—C6120.5 (2)C14—C15—H15C109.5
O4—C6—O2118.4 (2)H15A—C15—H15C109.5
O4—C6—C5124.5 (3)H15B—C15—H15C109.5
Hydrogen-bond geometry (Å, °) top
D—H···AD—HH···AD···AD—H···A
N1—H1N···O40.84 (4)2.05 (3)2.699 (3)133 (2)
C1—H1B···O3i0.962.573.480 (4)158
C9—H9···O5i0.932.593.429 (4)150
Symmetry codes: (i) x, y−1, z.
Table 1
Hydrogen-bond geometry (Å, °)
top
D—H···AD—HH···AD···AD—H···A
N1—H1N···O40.84 (4)2.05 (3)2.699 (3)133 (2)
C1—H1B···O3i0.962.573.480 (4)158
C9—H9···O5i0.932.593.429 (4)150
Symmetry codes: (i) x, y−1, z.
Acknowledgements top

This research is financially supported by the State Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences.

references
References top

Cassis, R., Tapia, R. & Valderrama, J. A. (1985). Synth. Commun. 15, 125–133.

Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565.

Gabe, E. J., Le Page, Y., Charland, J.-P., Lee, F. L. & White, P. S. (1989). J. Appl. Cryst. 22, 384–387.

Gabe, E. J. & White, P. S. (1993). DIFRAC. American Crystallographic Association Meeting, Pittsburgh, Abstract PA 104.

Ruchelman, A. L., Singh, S. K., Ray, A., Wu, X. H., Yang, J. M., Li, T. K., Liu, A., Liu, L. F. & LaVoie, E. J. (2003). Bioorg. Med. Chem. 11, 2061–2073.

Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122.